g.arboreum_cottongen_reftransV1_0010582, g.arboreum_cottongen_reftransV1_0010582 (contig) Gossypium arboreum

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: R0GUZ4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10004238mg PE=4 SV=1)

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 281/424 (66.27%), Postives = 349/424 (82.31%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLIN-----GAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            R+IFDQ  +KDLV W+ MIS YAE+D PQEALR+F E++  GI+PD +TM SVISACANLG L  AKW+H Y   +G    L INNALI+MYAKCG L  ARNVFE M +RNV+SW+ MINA+++HG+A++AL  F +MK+    PN +TFVGVLY CSH+GLVE+G+KIFASM +E+NITP  EHYGCMVDL  RAN L+EA+EI+E+MP APNVVIWGSLMSAC++HGE +LGE  AK +L+LEPDHDGALVL+SNIYA+E++W +V ++R +MKE+ + KE+G SRI+LN + HEFL+ D+ HKQ+ +IY KL+EVVS+LKL GY P++G VLVD+EEEEK ++VLWHSEKLALC+GL+N     G+  + IRIVKNLRVCEDCHTF KLVSKVY REIIVRDRTRFHHY+DG+CSCRDYW
Sbjct:  301 RVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPINNALINMYAKCGGLNEARNVFENMPTRNVVSWSSMINAYSMHGEASDALISFARMKQENAVPNAITFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPTLEHYGCMVDLFCRANRLQEALEIIESMPMAPNVVIWGSLMSACRVHGELKLGESAAKHILKLEPDHDGALVLMSNIYAREQRWDDVRNIRCVMKEKNVFKEKGLSRIDLNGKSHEFLIGDKRHKQSDKIYAKLDEVVSKLKLAGYVPHSGSVLVDVEEEEKNDLVLWHSEKLALCFGLMNKEEEKGSCGTVIRIVKNLRVCEDCHTFFKLVSKVYEREIIVRDRTRFHHYKDGLCSCRDYW 724          

HSP 2 Score: 123.635 bits (309), Expect = 7.774e-27
Identity = 70/265 (26.42%), Postives = 132/265 (49.81%), Query Frame = -2

Query:  667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKI--FASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362
            R +FD+M ++D+V+W+ MI  Y       EA +LF+E++   + PD++ + +++SAC   G +   + I+ +  +N       +  AL+ MYA  G ++ AR  FEKM+ RN                               ++ WT MI+A+A +     ALR F +M+ + ++P+ +T   V+ AC++ G + + + +  +  +    ++ P +     ++++  +   L EA  + E MP   NVV W S+++A  +HGE 
Sbjct:  169 RNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLIENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMSVRNLFVSTAMVSGYSKAGRLNEARVIFDQTEKKDLVCWTTMISAYAENDHPQEALRVFDEMRYSGIKPDLITMFSVISACANLGTLGNAKWVHHYTHISGLESVLPIN---NALINMYAKCGGLNEARNVFENMP-TRNVVSWSSMINAYSMHGEA 429          

HSP 3 Score: 92.4337 bits (228), Expect = 1.020e-16
Identity = 55/231 (23.81%), Postives = 109/231 (47.19%), Query Frame = -2

Query:  634 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVL 1326
            V ++  +   + S++P+  +  ++ ++  G R DQ +   ++ A   +    +   IH  A K        +   L+DMYA CG +E ARNVF++M+ R+V++W  MI+ +   G  + A + F++MK + V P+ +    ++ AC   G +   R I+  +I E++++        +V +   +  +  A E  E M       +    +S   + G ++ G     RV+
Sbjct:   80 VVFNPFLRDLSRSNEPRATILFYQRIRHAGGRLDQFSFPPILKAACKVSAFFEGMEIHGVAFKMATLSDPFVQTGLMDMYASCGRIECARNVFDEMSQRDVVTWNTMIDRYCRCGLLDEAFKLFEEMKFSNVMPDEMILCNIVSACGRTGNMSYNRAIYDFLI-ENDVSMDTHLLTALVTMYAGSGCMDMAREFFEKMS------VRNLFVSTAMVSGYSKAGRLNEARVI 303          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: S8CJR2_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_09864 PE=4 SV=1)

HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0
Identity = 274/420 (65.24%), Postives = 337/420 (80.24%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHY-RDGVCSCRDYW 1362
            RL+FD+MV+KDLV WSAMIS YAESD PQEAL++F ++Q  GI+PDQVTMLSVISACA+LG L +AK IH    +  FG +L INNALIDMYAKCGSL  A  VF +M  +NVISW+ MINAFA+HGDA NAL++F  MK   VEPN +TFVGVLYACSHAGLV +G+K F SM+ E+ ITPK EHYGC+VDL GRAN +R+A++IVETMP APNVVIWGSLM AC IHGE +LG + AK+VLEL+P HDGA + LSN YAKER W++VG LR LM++RGI KERG S IE+ + +HEFL  DR H++A EIY KL +VV ++K  GY+PNTG VL+D++E+EK  VV+ HSEKLALCYGLI   ++ CIRI+KNLR+CEDCH F+KL S V++REI++RDR+RFH +  DG CSC D+W
Sbjct:  309 RLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINNALIDMYAKCGSLHDASEVFIRMHHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPNWITFVGVLYACSHAGLVVEGQKAFESMVEEYRITPKLEHYGCLVDLYGRANHIRKALQIVETMPMAPNVVIWGSLMGACWIHGEFDLGVYAAKQVLELDPSHDGAHIFLSNAYAKERWWESVGGLRGLMRQRGIVKERGCSAIEVGDRIHEFLTGDRRHERADEIYAKLYQVVEKVKQVGYSPNTGGVLIDVDEDEKEAVVIGHSEKLALCYGLIEKGEEGCIRIIKNLRICEDCHKFVKLASGVFKREIVIRDRSRFHRFGGDGSCSCGDFW 728          

HSP 2 Score: 127.102 bits (318), Expect = 4.469e-28
Identity = 76/283 (26.86%), Postives = 142/283 (50.18%), Query Frame = -2

Query:  619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGD-------------------------------ANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEH--NITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET--ELGEFTAKRVLELEPD 1362
            R +FD M  KD+V+W+ MI GY +S    +AL L +E++  G+ PD+    +++S CA    LD  K +H    ++G     ++  AL++MYA  G+++ A+ +++KM  +NV++ T MI   + HGD                                  AL+ F +M++  ++P+ VT + V+ AC+H G +   ++I  +++ +      P +     ++D+  +   L +A E+   M    NV+ W S+++A  +HG+    L  FT  ++  +EP+
Sbjct:  178 RFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKS-GVEPDERIFTTILSGCARFKKLDIGKSVHELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKIKNVVASTVMITGHSRHGDIGAARLVFDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQVTMLSVISACAHLGALHRAKQIHETVVRKEFGRALPINN---ALIDMYAKCGSLHDASEVFIRM-HHKNVISWSSMINAFAVHGDAANALKHFTLMKLENVEPN 455          

HSP 3 Score: 70.4774 bits (171), Expect = 1.190e-9
Identity = 59/271 (21.77%), Postives = 119/271 (43.91%), Query Frame = -2

Query:  508 MISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNI---YAKERKWQNVGDLRQLMKERGISKER 1311
            +I+  + S   + A+  F+ +       D+ +   +I   +    LD+ +  H  A K G+     +  AL+ MY  CG +  AR +F+ M+ +++++W  MI+ +      ++AL   ++MK   VEP+   F  +L  C+    ++ G+ +   +I+        +    +V++   +  +  A  + + M    NVV      S   I G +  G+  A R++  +   D  LV  S +   YA+    Q    +   M++ GI  ++
Sbjct:   94 IINHLSRSSDNRNAILFFQAMLRKDFPIDRFSFPPMIKTASKARALDEGRMFHALAAKLGYDSDPFVETALMGMYGACGLISDARFLFDAMSHKDIVAWNIMIDGYCQSQLFDDALALLEEMKSG-VEPDERIFTTILSGCARFKKLDIGKSVH-ELISRSGTVLDSQLQTALVNMYANSGAMDLAQTLYDKMKI-KNVV-----ASTVMITGHSRHGDIGAARLV-FDEMVDKDLVCWSAMISCYAESDHPQEALKIFDQMQQNGIKPDQ 355          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0UAN8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 519.235 bits (1336), Expect = 1.557e-178
Identity = 243/419 (58.00%), Postives = 305/419 (72.79%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G  D+AKW+H++ DKNGF   L I NALIDMY+KCGSL  AR +F++   ++VI+WT MI  FA+HG+  +AL  F  M    V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE  A+R+LEL+P+HDGA VLLSNIYAK  +W++V ++R LMK +G                         H ++ EIY K                       L+EEEKRE +L HSEKLAL  GLI+  K S I I KNLRVC+DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W
Sbjct:   66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSSEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNLRVCDDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: M0TTX8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 517.309 bits (1331), Expect = 9.596e-178
Identity = 242/419 (57.76%), Postives = 304/419 (72.55%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            R IFDQM +KDLV WSAMISGYAESDQP EAL+LF E+ +LG++PDQ+TMLSVISACAN+G  D+AKW+H++ DKNGF   L I NALIDMY+KCGSL  AR +F++   ++VI+WT MI  FA+HG+  +AL  F  M    V+PNGVTF+ +LYACSHAGLV++GR+IF SMI ++ + PKHEHYGCMVDLLGRA LL+EA+E +E+MPFAPNVV+WGSL+ AC+IHG+ +LGE  A+R+LEL+P+HDGA VLLSNIYAK  +W++V ++R LMK +G                         H ++ EIY K                       L+EEEKRE +L HSEKLAL  GLI+  K S I I KN+RVC DCHTF+KL SKV+ REI++RDRTRFHHY+DGVCSC D+W
Sbjct:   66 RFIFDQMTDKDLVCWSAMISGYAESDQPNEALKLFNEMHLLGVKPDQITMLSVISACANMGARDQAKWVHIFVDKNGFHQILSIRNALIDMYSKCGSLVDARTIFDETAFKDVITWTSMITGFAMHGNGRSALAVFDHMISEGVKPNGVTFISLLYACSHAGLVDEGRRIFESMIQDYRLEPKHEHYGCMVDLLGRARLLQEALEFIESMPFAPNVVVWGSLLGACRIHGDVKLGELVARRLLELDPNHDGAYVLLSNIYAKASRWEDVREVRNLMKNKGC------------------------HPRSNEIYGK-----------------------LDEEEKREAILLHSEKLALSLGLIDSKKGSSIHIAKNIRVCNDCHTFMKLASKVFEREIVLRDRTRFHHYKDGVCSCGDFW 437          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A078I121_BRANA (BnaC01g22730D protein OS=Brassica napus GN=BnaC01g22730D PE=4 SV=1)

HSP 1 Score: 481.871 bits (1239), Expect = 4.774e-161
Identity = 222/339 (65.49%), Postives = 276/339 (81.42%), Query Frame = -2

Query:  346 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDL 1362
            R IFD+M +KDLV W+ MIS YAESD P+EALR+F E++  G  PD++ M SV+SACA+LGVL+KAKW+H Y  +NGF  SL +NNALI+MYAKCGSL+ AR VFE+M ++NV+SW+ MINAF++HG+AN+AL  F +MK+  VEPN VTFVGVLY CSH+GLVE+G KI ASM +E+NITPK EHYGCMVDL GRAN L EA+E++E+MP APNV IWGSLMSAC++HGE ELGEF AKRVLELEPDHDGALVL+SNIYA+E +W +V  +R+ M+E+ + KE+G SRI+LN E HEFL+ D+ HKQ+ EI  KL EVVS LKL G  P+ G VLVD+
Sbjct:  295 RDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNNALINMYAKCGSLDAARGVFEEMPTKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPNDVTFVGVLYGCSHSGLVEEGNKILASMTDEYNITPKLEHYGCMVDLFGRANRLPEALEVIESMPMAPNVFIWGSLMSACRVHGELELGEFAAKRVLELEPDHDGALVLMSNIYAREERWDDVRKVRRGMEEKNVFKEKGVSRIDLNGESHEFLIGDKRHKQSDEISAKLKEVVSELKLAGCIPDYGSVLVDV 633          

HSP 2 Score: 115.546 bits (288), Expect = 2.350e-24
Identity = 75/289 (25.95%), Postives = 137/289 (47.40%), Query Frame = -2

Query:  619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNG--------------FGG-----------------SLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDG--------RKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362
            R +FD+M ++D+V+W+ MI  Y      +EA +LF+E++   + PD++ + +++SACA  G       I+ +  +N               + G                 SL ++ A++  +AK   L+ AR++F++M  ++++ WT MI+A+A       ALR F +M+    EP+ +    V+ AC+  G++E          R  F S +  +N          ++++  +   L  A  + E MP   NVV W S+++A  +HGE    L  F   +   +EP+
Sbjct:  163 RKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRMEKKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPDEIAMGSVVSACASLGVLEKAKWVHEYTHRNGFESSLTVNN---------ALINMYAKCGSLDAARGVFEEMP-TKNVVSWSSMINAFSMHGEANDALALFARMKQENVEPN 441          

HSP 3 Score: 85.5001 bits (210), Expect = 1.567e-14
Identity = 65/258 (25.19%), Postives = 113/258 (43.80%), Query Frame = -2

Query:  619 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASM------INEHNITPKHEHY---GC---------------------MVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSAC--QIHGETELGEFTAKRVLELEPD 1296
            + SD+P+  +  ++ ++  G R DQ +   ++ A A +  L +   +H  A K        +  A++DMYA CG +  AR VF++M  R+V++W  MI  +   G    A + F++MK + V P+ +    ++ AC+ +G       I+  +      ++ H +T     Y   GC                     MV    +A  L +A +I + M    ++V W +++SA     H E  L  F   R    EPD
Sbjct:   84 SRSDEPRATILFYQRIRHAGGRLDQFSFTPILKAAAKVSALFEGTELHGLALKLATLSDPFVKTAVMDMYACCGKIVEARKVFDEMPQRDVVTWNTMIERYCRCGFLEEAFKLFEEMKCSNVMPDEMILCNIVSACARSGNTRYNSPIYEFLKENDVRMDAHLLTALVTMYAGAGCMDIAREFYMKMSVRSLFVSTAMVSGFAKARRLDDARDIFDRME-KKDLVCWTTMISAYAESDHPEEALRVFDEMRRYGTEPD 340          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 407.142 bits (1045), Expect = 2.807e-133
Identity = 190/422 (45.02%), Postives = 278/422 (65.88%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKD-----SCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356
            +F +M +K LVSW+ MI  Y ++  P EA+ L+  ++  G  PD V++ SV+ AC +   L   K IH Y ++     +L + NALIDMYAKCG LE+AR+VFE M SR+V+SWT MI+A+   G   +A+  F K++++ + P+ + FV  L ACSHAGL+E+GR  F  M + + ITP+ EH  CMVDLLGRA  ++EA   ++ M   PN  +WG+L+ AC++H +T++G   A ++ +L P+  G  VLLSNIYAK  +W+ V ++R +MK +G+ K  G S +E+N  +H FLV DR+H Q+ EIY +L+ +V ++K  GY P++   L D+EEE+K   +  HSEKLA+ + L+N  ++     + IRI KNLR+C DCH   KL+S++  REII+RD  RFH +R GVCSC DYW
Sbjct:  265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686          

HSP 2 Score: 103.605 bits (257), Expect = 2.522e-22
Identity = 77/296 (26.01%), Postives = 141/296 (47.64%), Query Frame = -2

Query:  520 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGL--VEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMP---FAPNVVIWGSLMSAC----------QIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGI 1362
            R +FD++ E++++  + MI  Y  +    E +++F  +    +RPD  T   V+ AC+  G +   + IH  A K G   +L + N L+ MY KCG L  AR V ++M+ R+V+SW  ++  +A +   ++AL   ++M+  ++  +  T   +L A S+     V   + +F  M  +  ++     +  M+ +  +  +  EAVE+   M    F P+ V   S++ AC          +IHG  E  +     +LE       AL+   ++YAK    +   D+ + MK R +
Sbjct:   94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE------NALI---DMYAKCGCLEKARDVFENMKSRDV 375          

HSP 3 Score: 71.633 bits (174), Expect = 5.224e-12
Identity = 40/150 (26.67%), Postives = 77/150 (51.33%), Query Frame = -2

Query:  919 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAK-WIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMT-SRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNG 1362
            R +F+ M  +D+VSW+AMIS Y  S +  +A+ LF +LQ  G+ PD +  ++ ++AC++ G+L++ +    +  D       L     ++D+  + G ++ A    + M+   N   W  ++ A  +H D +  L    K+ +   E +G
Sbjct:  364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513          

HSP 4 Score: 58.5362 bits (140), Expect = 6.849e-8
Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = -2

Query:  694 LRINNAL----IDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLM 1119
            LR N++L    +  YA    +  AR VF+++  RNVI    MI ++  +G     ++ F  M    V P+  TF  VL ACS +G +  GRKI  S       +      G +V + G+   L EA  +++ M    +VV W SL+
Sbjct:   70 LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG-LVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 4.827e-133
Identity = 191/426 (44.84%), Postives = 287/426 (67.37%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILG-----IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSR-NVISWTGMINAFAIHGDANNALRYFQKMKEA-RVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            R +FD+M E++++SWS +I+GY    + +EAL LF+E+Q+       +RP++ TM +V+SAC  LG L++ KW+H Y DK      + +  ALIDMYAKCGSLERA+ VF  + S+ +V +++ MI   A++G  +   + F +M  +  + PN VTFVG+L AC H GL+ +G+  F  MI E  ITP  +HYGCMVDL GR+ L++EA   + +MP  P+V+IWGSL+S  ++ G+ +  E   KR++EL+P + GA VLLSN+YAK  +W  V  +R  M+ +GI+K  G S +E+   VHEF+V D + +++  IY  L+E++ RL+  GY  +T  VL+DL E++K   + +HSEKLA+ + L+     + +RI+KNLR+C DCH  +K++SK++ REI+VRD  RFHH+RDG CSCRD+W
Sbjct:  148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573          

HSP 2 Score: 78.9518 bits (193), Expect = 2.124e-14
Identity = 55/231 (23.81%), Postives = 110/231 (47.62%), Query Frame = -2

Query:  664 VEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMK-----EARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1341
            V  D  ++  ++  +          R   ++ + G+  D     S+++  ++ G L  A+ +    D +G    L   N++++ YAK G ++ AR +F++M  RNVISW+ +IN + + G    AL  F++M+     EA V PN  T   VL AC   G +E G+ + A  I+++++         ++D+  +   L  A  +   +    +V  + +++    ++G T+
Sbjct:   58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF---DDSG-SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA-YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 5.718e-132
Identity = 195/417 (46.76%), Postives = 278/417 (66.67%), Query Frame = -2

Query:  106 FDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQIL-GIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1353
            F+ M EK++VSW+ +ISG  +    +EA+ +F  +Q   G+  D VTM+S+ SAC +LG LD AKWI+ Y +KNG    +R+   L+DM+++CG  E A ++F  +T+R+V +WT  I A A+ G+A  A+  F  M E  ++P+GV FVG L ACSH GLV+ G++IF SM+  H ++P+  HYGCMVDLLGRA LL EAV+++E MP  PN VIW SL++AC++ G  E+  + A+++  L P+  G+ VLLSN+YA   +W ++  +R  MKE+G+ K  G S I++  + HEF   D +H +   I   L+EV  R    G+ P+   VL+D++E+EK  ++  HSEKLA+ YGLI+  K + IRIVKNLRVC DCH+F K  SKVY REII+RD  RFH+ R G CSC D+W
Sbjct:  426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842          

HSP 2 Score: 111.309 bits (277), Expect = 8.946e-25
Identity = 79/247 (31.98%), Postives = 121/247 (48.99%), Query Frame = -2

Query:  589 WSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKM-KEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPDHDGALVLLSN 1320
            ++++I GYA S    EA+ LF  +   GI PD+ T    +SACA          IH    K G+   L + N+L+  YA+CG L+ AR VF++M+ RNV+SWT MI  +A    A +A+  F +M ++  V PN VT V V+ AC+    +E G K++A  I    I         +VD+  + N +  A  + +    A N+ +  ++ S     G T   LG F       + PD    L  +S+
Sbjct:  102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346          

HSP 3 Score: 100.138 bits (248), Expect = 4.593e-21
Identity = 54/178 (30.34%), Postives = 96/178 (53.93%), Query Frame = -2

Query:  823 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNI 1356
            +FD+    +L   +AM S Y      +EAL +F  +   G+RPD+++MLS IS+C+ L  +   K  H Y  +NGF     I NALIDMY KC   + A  +F++M+++ V++W  ++  +  +G+ + A   F+ M E  +    V++  ++       L E+  ++F SM ++  +
Sbjct:  293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466          

HSP 4 Score: 96.6709 bits (239), Expect = 5.217e-20
Identity = 50/161 (31.06%), Postives = 95/161 (59.01%), Query Frame = -2

Query:  883 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLF-KELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSH 1362
            R +FD+M E+++VSW++MI GYA  D  ++A+ LF + ++   + P+ VTM+ VISACA L  L+  + ++ +   +G   +  + +AL+DMY KC +++ A+ +F++  + N+     M + +   G    AL  F  M ++ V P+ ++ +  + +CS 
Sbjct:  189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 6.167e-131
Identity = 186/417 (44.60%), Postives = 276/417 (66.19%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356
            +FD+M ++D VSW+AMI+GY++S    EALRLF +++  G R ++ +  S +S CA++  L+  K +H    K G+     + NAL+ MY KCGS+E A ++F++M  ++++SW  MI  ++ HG    ALR+F+ MK   ++P+  T V VL ACSH GLV+ GR+ F +M  ++ + P  +HY CMVDLLGRA LL +A  +++ MPF P+  IWG+L+ A ++HG TEL E  A ++  +EP++ G  VLLSN+YA   +W +VG LR  M+++G+ K  GYS IE+ N+ H F V D  H +  EI+  L E+  R+K  GY   T  VL D+EEEEK  +V +HSE+LA+ YG++  +    IR++KNLRVCEDCH  +K ++++  R II+RD  RFHH++DG CSC DYW
Sbjct:  365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781          

HSP 2 Score: 88.9669 bits (219), Expect = 1.961e-17
Identity = 73/294 (24.83%), Postives = 131/294 (44.56%), Query Frame = -2

Query:  592 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAK-------------WIHVYADKNGFGGSLRIN-----------------NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVD-----LLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIH--GETELGEFTAKRVLELEPDHDGALVLLS 1362
            R  FD M  +D+VSW+ +I+GYA+S +  EA +LF E  +     D  T  +++S      ++++A+             W  + A   G+    R+                  N +I  YA+CG +  A+N+F+KM  R+ +SW  MI  ++  G +  ALR F +M+      N  +F   L  C+    +E G+++   ++     T      GC V      +  +   + EA ++ + M    ++V W ++++    H  GE  L  F + +   L+PD    + +LS
Sbjct:  239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLA---GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518          

HSP 3 Score: 66.6254 bits (161), Expect = 2.072e-10
Identity = 56/237 (23.63%), Postives = 107/237 (45.15%), Query Frame = -2

Query:  667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRIN-----NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362
            R +FD+M EK+ VSW+A++S Y ++ + +EA  LFK  +   +         V   C   G + K K +    +   F  S+ +      N +I  YA+ G ++ AR +F++   ++V +WT M++ +  +     A   F KM E     N V++  +L        +E  +++F  M   +  T     +  M+    +   + EA  + + MP   + V W ++++     G +
Sbjct:  177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL---------VSWNCLLGGFVKKKKIV----EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST-----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390          

HSP 4 Score: 65.4698 bits (158), Expect = 5.045e-10
Identity = 66/278 (23.74%), Postives = 121/278 (43.53%), Query Frame = -2

Query:  613 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIH-VYADKNGFGGSLRIN--------------------------NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFT-AKRVLELEPDHD 1362
            R +FD+M E+DLVSW+ MI GY  +    +A  LF   +I+  R D  +  +++S  A  G +D A+ +     +KN    +  ++                          N L+  + K   +  AR  F+ M  R+V+SW  +I  +A  G  + A + F    E+ V+ +  T+  ++       +VE+ R++F  M   + ++     +  M+    +   +  A E+ + MP   NV  W ++     I G  + G+ + AK + +  P  D
Sbjct:  115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF---EIMPER-DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD---ESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAKELFDVMP-CRNVSTWNTM-----ITGYAQCGKISEAKNLFDKMPKRD 373          

HSP 5 Score: 61.2326 bits (147), Expect = 1.173e-8
Identity = 63/272 (23.16%), Postives = 121/272 (44.49%), Query Frame = -2

Query:  526 EKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHD-GALVLLSNIYAKERKWQNVGDLRQLMKER 1338
            + D+  W+  IS Y  + +  EALR+FK +     R   V+   +IS     G  + A+ +     +      L   N +I  Y +  +L +AR +FE M  R+V SW  M++ +A +G  ++A   F +M     E N V++  +L A      +E+   +F S  N   ++     + C++    +   + EA +  ++M    +VV W ++++     G+ +     A+++ +  P  D      + + Y + R  +   +L   M ER
Sbjct:   61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WNCLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKID----EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 9.722e-131
Identity = 191/417 (45.80%), Postives = 274/417 (65.71%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356
            +FD+MV  D + W+++I G+A++ +   AL LFK ++  G   +Q T+ SV+ AC  L +L+     HV+  K  +   L +NNAL+DMY KCGSLE A  VF +M  R+VI+W+ MI+  A +G +  AL+ F++MK +  +PN +T VGVL+ACSHAGL+EDG   F SM   + I P  EHYGCM+DLLG+A  L +AV+++  M   P+ V W +L+ AC++     L E+ AK+V+ L+P+  G   LLSNIYA  +KW +V ++R  M++RGI KE G S IE+N ++H F++ D +H Q  E+ +KLN+++ RL   GY P T  VL DLE E+  + +  HSEKLAL +GL+    +  IRI KNLR+C DCH F KL SK+  R I++RD  R+HH++DG CSC DYW
Sbjct:  216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630          

HSP 2 Score: 104.76 bits (260), Expect = 9.230e-23
Identity = 63/232 (27.16%), Postives = 120/232 (51.72%), Query Frame = -2

Query:  664 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMIN-EHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356
            +FDQM +++++SW+ MIS Y++    Q+AL L   +    +RP+  T  SV+ +C  +      + +H    K G    + + +ALID++AK G  E A +VF++M + + I W  +I  FA +  ++ AL  F++MK A       T   VL AC+   L+E G +    ++  + ++   +     +VD+  +   L +A+ +   M    +V+ W +++S    +G ++
Sbjct:  118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQ 341          

HSP 3 Score: 68.9366 bits (167), Expect = 3.552e-11
Identity = 52/210 (24.76%), Postives = 94/210 (44.76%), Query Frame = -2

Query:  688 ESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACS--------HAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1293
            + D P+ A++    LQ  G+  D  T   +I  C +   + +   I  +   NG    + + N LI+MY K   L  A  +F++M  RNVISWT MI+A++       AL     M    V PN  T+  VL +C+        H G++++G         E ++  +      ++D+  +     +A+ + + M    + ++W S++  
Sbjct:   39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGL--------ESDVFVR----SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 1.461e-127
Identity = 180/419 (42.96%), Postives = 280/419 (66.83%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            +++FD+M   +L+ W+AMISGYA++   +EA+ +F E+    +RPD +++ S ISACA +G L++A+ ++ Y  ++ +   + I++ALIDM+AKCGS+E AR VF++   R+V+ W+ MI  + +HG A  A+  ++ M+   V PN VTF+G+L AC+H+G+V +G   F  M  +H I P+ +HY C++DLLGRA  L +A E+++ MP  P V +WG+L+SAC+ H   ELGE+ A+++  ++P + G  V LSN+YA  R W  V ++R  MKE+G++K+ G S +E+   +  F V D++H +  EI  ++  + SRLK  G+  N    L DL +EE  E +  HSE++A+ YGLI+  + + +RI KNLR C +CH   KL+SK+  REI+VRD  RFHH++DGVCSC DYW
Sbjct:  277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694          

HSP 2 Score: 124.405 bits (311), Expect = 4.255e-29
Identity = 71/239 (29.71%), Postives = 123/239 (51.46%), Query Frame = -2

Query:  673 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFE--KMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEH-NITPKHEHYGCMVDLLGRANLLREAVEIVETMPF------APNVVIWGSLMSACQIHG 1362
            R +FD +    +  W+A+I GY+ ++  Q+AL ++  +Q+  + PD  T   ++ AC+ L  L   +++H    + GF   + + N LI +YAKC  L  AR VFE   +  R ++SWT +++A+A +G+   AL  F +M++  V+P+ V  V VL A +    ++ GR I AS++     I P         DLL   N +      V T         +PN+++W +++S    +G
Sbjct:   73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---------DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302          

HSP 3 Score: 120.168 bits (300), Expect = 9.244e-28
Identity = 65/232 (28.02%), Postives = 123/232 (53.02%), Query Frame = -2

Query:  673 RLIFD--QMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1362
            R +F+   + E+ +VSW+A++S YA++ +P EAL +F +++ + ++PD V ++SV++A   L  L + + IH    K G      +  +L  MYAKCG +  A+ +F+KM S N+I W  MI+ +A +G A  A+  F +M    V P+ ++    + AC+  G +E  R ++   +   +          ++D+  +   + E   +V       +VV+W +++    +HG
Sbjct:  174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY-EYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHG 403          

HSP 4 Score: 61.2326 bits (147), Expect = 1.003e-8
Identity = 41/164 (25.00%), Postives = 75/164 (45.73%), Query Frame = -2

Query:  619 LIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVI-WGSLMSACQIHGET--ELGEFTAKRVLELEPD 1101
            LI   +  G +  AR VF+ +    +  W  +I  ++ +    +AL  +  M+ ARV P+  TF  +L ACS    ++ GR + A +             G ++ L  +   L  A  + E +P     ++ W +++SA   +GE    L  F+  R ++++PD
Sbjct:   59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG-LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 1.884e-127
Identity = 187/421 (44.42%), Postives = 274/421 (65.08%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGS--LRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKM-KEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYS-RIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356
            +F+ +  KD+V+W+AM++G+A++ +PQEAL  F  ++  GIR D+VT+   ISACA LG    A      A K+G+  S  + I +ALIDMY+KCG++E A NVF  M ++NV +++ MI   A HG A  AL  F  M  +  ++PN VTFVG L ACSH+GLV+ GR++F SM     + P  +HY CMVDLLGR   L+EA+E+++TM   P+  +WG+L+ AC+IH   E+ E  A+ + ELEPD  G  +LLSN+YA    W  V  +R+L+KE+G+ K    S  ++ N ++H+F   + NH  + +I +KL E+V RL + GY P+   V  D+ +  KR +++ H+EKLAL + L+   +DS I I+KNLR+C DCH F++L S+V  + II+RD  RFHH+R G CSC D+W
Sbjct:  237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657          

HSP 2 Score: 87.0409 bits (214), Expect = 6.884e-17
Identity = 66/254 (25.98%), Postives = 116/254 (45.67%), Query Frame = -2

Query:  664 WSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADK-NGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFA--------------------------IHGDANN-----ALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHY---GCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1320
            W+A+I GYA   +  EA+ ++  ++   I P   T  +++ AC  +  L+  +  H    +  GF   + + N +IDMY KC S++ AR VF++M  R+VISWT +I A+A                          + G A N     AL YF +M+++ +  + VT  G + AC+  G  +   +  A  I + +     +H      ++D+  +   + EAV +  +M    NV  + S++     HG  +
Sbjct:  117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC-FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADR--AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQ 366          

HSP 3 Score: 58.5362 bits (140), Expect = 8.059e-8
Identity = 59/236 (25.00%), Postives = 98/236 (41.53%), Query Frame = -2

Query:  520 TMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSL--ERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDG-ALVLLSNIYAKERKWQNVGDLRQLMKERGI 1218
            +++S +  C NL   ++ K IH +  + G   S  I   LI    K G      AR V E +  RN   WT +I  +AI G  + A+  +  M++  + P   TF  +L AC     +  GR+  A           +     M+D+  +   +  A ++ + MP   +V+ W  L++A    G  E     A  + E  P  D  A   +   +A+  K Q   +    M++ GI
Sbjct:   51 SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG-NTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAYARVGNME----CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 3.662e-127
Identity = 184/419 (43.91%), Postives = 282/419 (67.30%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGV-LDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHY-RDGVCSCRDYW 1356
            +F  + +KD+V+WSAM++GYA++ + + A+++F EL   GI+P++ T  S+++ CA     + + K  H +A K+    SL +++AL+ MYAK G++E A  VF++   ++++SW  MI+ +A HG A  AL  F++MK+ +V+ +GVTF+GV  AC+HAGLVE+G K F  M+ +  I P  EH  CMVDL  RA  L +A++++E MP      IW ++++AC++H +TELG   A++++ ++P+   A VLLSN+YA+   WQ    +R+LM ER + KE GYS IE+ N+ + FL  DR+H    +IY KL ++ +RLK  GY P+T  VL D+++E K  V+  HSE+LA+ +GLI   K S + I+KNLRVC DCH  +KL++K+  REI+VRD  RFHH+  DGVCSC D+W
Sbjct:  450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868          

HSP 2 Score: 113.62 bits (283), Expect = 1.510e-25
Identity = 61/225 (27.11%), Postives = 120/225 (53.33%), Query Frame = -2

Query:  688 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1362
            R +FD+M E+++V+W+ +ISGYA +    E L LF  +Q  G +P+  T  + +   A  GV  +   +H    KNG   ++ ++N+LI++Y KCG++ +AR +F+K   ++V++W  MI+ +A +G    AL  F  M+   V  +  +F  V+  C++   +    ++  S++    +  ++     MV    +   + +A+ + + +    NVV W +++S 
Sbjct:  148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371          

HSP 3 Score: 102.064 bits (253), Expect = 1.120e-21
Identity = 56/221 (25.34%), Postives = 113/221 (51.13%), Query Frame = -2

Query:  670 DLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGE 1332
            ++VSW+AMISG+ ++D  +EA+ LF E++  G+RP++ T   +++A   L V+  ++ +H    K  +  S  +  AL+D Y K G +E A  VF  +  +++++W+ M+  +A  G+   A++ F ++ +  ++PN  TF  +L  C+         K F     +  +         ++ +  +   +  A E+ +      ++V W S++S    HG+
Sbjct:  361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576          

HSP 4 Score: 89.3521 bits (220), Expect = 1.622e-17
Identity = 61/242 (25.21%), Postives = 117/242 (48.35%), Query Frame = -2

Query:  637 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET--ELGEFTAKRV 1356
            +FD+   +D  S+ +++ G++   + QEA RLF  +  LG+  D     SV+   A L      + +H    K GF   + +  +L+D Y K  + +  R VF++M  RNV++WT +I+ +A +   +  L  F +M+    +PN  TF   L   +  G+   G ++  +++ ++ +         +++L  +   +R+A  I+       +VV W S++S    +G     LG F + R+
Sbjct:   49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH-TVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 1.353e-126
Identity = 185/420 (44.05%), Postives = 279/420 (66.43%), Query Frame = -2

Query:  106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVA-DRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362
            R +FD+M  ++L +WS MI+GYA+++  ++A+ LF+ ++  G+  ++  M+SVIS+CA+LG L+  +  + Y  K+    +L +  AL+DM+ +CG +E+A +VFE +   + +SW+ +I   A+HG A+ A+ YF +M      P  VTF  VL ACSH GLVE G +I+ +M  +H I P+ EHYGC+VD+LGRA  L EA   +  M   PN  I G+L+ AC+I+  TE+ E     +++++P+H G  VLLSNIYA   +W  +  LR +MKE+ + K  G+S IE++ ++++F +  D+ H +  +I  K  E++ +++L GY  NTG    D++EEEK   +  HSEKLA+ YG++     + IRIVKNLRVCEDCHT  KL+S+VY RE+IVRDR RFHH+R+GVCSCRDYW
Sbjct:  203 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622          

HSP 2 Score: 96.2857 bits (238), Expect = 6.469e-20
Identity = 61/259 (23.55%), Postives = 116/259 (44.79%), Query Frame = -2

Query:  673 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYA-------------------------------KCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1356
            IF Q+   +L  ++ +I  ++   +P +A   + ++    I PD +T   +I A + +  +   +  H    + GF   + + N+L+ MYA                               KCG +E AR +F++M  RN+ +W+ MIN +A +     A+  F+ MK   V  N    V V+ +C+H G +E G + +  ++  H +T        +VD+  R   + +A+ + E +P   + + W S++    +HG
Sbjct:   73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHG 329          

BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.792e-126
Identity = 187/419 (44.63%), Postives = 274/419 (65.39%), Query Frame = -2

Query:  106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL--QILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356
            +F  M  +++VSWSAMI+ YA++ +  EALR F+E+  +     P+ VTM+SV+ ACA+L  L++ K IH Y  + G    L + +AL+ MY +CG LE  + VF++M  R+V+SW  +I+++ +HG    A++ F++M      P  VTFV VL ACSH GLVE+G+++F +M  +H I P+ EHY CMVDLLGRAN L EA ++V+ M   P   +WGSL+ +C+IHG  EL E  ++R+  LEP + G  VLL++IYA+ + W  V  +++L++ RG+ K  G   +E+  +++ F+  D  +    +I+  L ++   +K  GY P T  VL +LE EEK  +VL HSEKLAL +GLIN +K   IRI KNLR+CEDCH F K +SK   +EI+VRD  RFH +++GVCSC DYW
Sbjct:  239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657          

HSP 2 Score: 115.161 bits (287), Expect = 4.089e-26
Identity = 74/238 (31.09%), Postives = 121/238 (50.84%), Query Frame = -2

Query:  673 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACA----NLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQK-MKEAR-VEPNGVTFVGVLYACSHAGLVEDGRKIFASMINE--HNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1362
            R +FD+  ++ +  W+A+      +   +E L L+ ++  +G+  D+ T   V+ AC      +  L K K IH +  + G+   + I   L+DMYA+ G ++ A  VF  M  RNV+SW+ MI  +A +G A  ALR F++ M+E +   PN VT V VL AC+    +E G+ I   ++     +I P       +V + GR   L     + + M    +VV W SL+S+  +HG
Sbjct:  132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV---ISALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365          

HSP 3 Score: 64.6994 bits (156), Expect = 8.446e-10
Identity = 56/218 (25.69%), Postives = 91/218 (41.74%), Query Frame = -2

Query:  685 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVED----GRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSAC 1326
            +S + +I    +  + ++A+R+  +       P Q T   +I  C +   L  A  +H +   NG      +   LI MY+  GS++ AR VF+K   R +  W  +  A  + G     L  + KM    VE +  T+  VL AC  +    +    G++I A +      +        +VD+  R   +  A  +   MP   NVV W S M AC
Sbjct:   47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL-TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSW-SAMIAC 257