g.arboreum_cottongen_reftransV1_0010582, g.arboreum_cottongen_reftransV1_0010582 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A0B0NLW2_GOSAR (Pentatricopeptide repeat-containing-like protein OS=Gossypium arboreum GN=F383_05089 PE=4 SV=1) HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW Sbjct: 303 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 721 HSP 2 Score: 122.479 bits (306), Expect = 1.481e-26 Identity = 75/281 (26.69%), Postives = 136/281 (48.40%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNV-------------------------------ISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362 RL+FD+M +D+V+W MI GY +S+ +AL LF+E++ I D+ + ++SACA G LD K IH Y + + AL+ MYA CG ++ A+ ++++M +NV +SW+ MI+ +A ALR F++++ + P+ VT + V+ AC++ G+++ + I +++ ++D+ + L A + E M + NV+ W +++A IHG+ L F + +EP+ Sbjct: 171 RLVFDKMSYRDIVAWRIMIDGYCQSELFDDALELFEEMKRANIEADKFVLSGILSACARAGNLDCGKAIHDYIIQKELVIDAHLRCALVTMYASCGCMDMAQQLYDQMKPKNVVVSTAMVSGYSRHGRVKDARLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHV-YADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMT-SRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPN 449 HSP 3 Score: 98.9821 bits (245), Expect = 8.237e-19 Identity = 59/222 (26.58%), Postives = 112/222 (50.45%), Query Frame = -2 Query: 631 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLE 1296 + S +P+ A +++ L+ GI D+ ++ A + +G L + K IH + K+GF + L+ MY CG L AR VF+KM+ R++++W MI+ + ++AL F++MK A +E + G+L AC+ AG ++ G+ I +I + + H +V + + A ++ + M NVV+ +++S HG + +++E Sbjct: 92 SRSSKPEFAFFVYQRLRNEGIPIDRFAFPPLLKAASRVGWLAEGKEIHGFGFKSGFHSDPFVQTGLMVMYVGCGRLPEARLVFDKMSYRDIVAWRIMIDGYCQSELFDDALELFEEMKRANIEADKFVLSGILSACARAGNLDCGKAIHDYIIQKELVIDAHLRCA-LVTMYASCGCMDMAQQLYDQMK-PKNVVVSTAMVSGYSRHGRVKDARLIFDQMVE 311
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A0D2T7B3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G264200 PE=4 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 403/419 (96.18%), Postives = 409/419 (97.61%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLF EL+ILGI PDQVTMLSVISACANLGVLDKAKW HVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWT MINAFAIHGDANNALRYFQKMKEA VEPNGVTFVGVLYACSHAGLVE+GRKIFASMINEHNITPKHEHYGCMVDL GRANLLREAVEIVETMPFA NVVIWGSLMSACQIHGETELGEFTA RVLELEPDHDGALVLLSNIYAKERKW+NVGDLRQLMKERGI KERG SRIELN+E+HEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREI+VRDRTRFHHYRDGVCSCRDYW Sbjct: 303 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFNELEILGIGPDQVTMLSVISACANLGVLDKAKWKHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTSMINAFAIHGDANNALRYFQKMKEACVEPNGVTFVGVLYACSHAGLVEEGRKIFASMINEHNITPKHEHYGCMVDLFGRANLLREAVEIVETMPFASNVVIWGSLMSACQIHGETELGEFTATRVLELEPDHDGALVLLSNIYAKERKWKNVGDLRQLMKERGICKERGCSRIELNDEMHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIVVRDRTRFHHYRDGVCSCRDYW 721 HSP 2 Score: 120.553 bits (301), Expect = 7.409e-26 Identity = 71/265 (26.79%), Postives = 131/265 (49.43%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNV-------------------------------ISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDG--RKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M +D+V+W MI GY +++ +AL LF+E++ I D+ + S++SAC G LD K IH Y + + AL+ MYA CG ++ A+ ++++M +NV +SW+ MI+ +A ALR F +++ + P+ VT + V+ AC++ G+++ + ++A +++ ++D+ + L A + E M + NV+ W S+++A IHG+ Sbjct: 171 RLVFDKMSYRDIVAWRVMIDGYCQNELFDDALELFEEMKRANIEADKFVLSSILSACGRAGNLDCGKAIHDYIIQKELVIDAHLRCALVTMYASCGCMDMAQQLYDQMIPKNVVVSTAMVSGYSRHGRVKDARLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFNELEILGIGPDQVTMLSVISACANLGVLDKAKWKHVYA---DKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMT-SRNVISWTSMINAFAIHGDA 431 HSP 3 Score: 97.4413 bits (241), Expect = 2.620e-18 Identity = 58/222 (26.13%), Postives = 111/222 (50.00%), Query Frame = -2 Query: 631 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLE 1296 + S +P+ A +++ L+ GI D+ ++ A + +G L + K IH + K+GF + L+ MY CG L AR VF+KM+ R++++W MI+ + + ++AL F++MK A +E + +L AC AG ++ G+ I +I + + H +V + + A ++ + M NVV+ +++S HG + +++E Sbjct: 92 SRSSKPEFAFFVYQRLRNEGIPIDRFAFPPLLKAASRVGWLAEGKEIHGFGFKSGFHSDPFVQTGLMVMYVGCGRLTEARLVFDKMSYRDIVAWRVMIDGYCQNELFDDALELFEEMKRANIEADKFVLSSILSACGRAGNLDCGKAIHDYIIQKELVIDAHLRCA-LVTMYASCGCMDMAQQLYDQM-IPKNVVVSTAMVSGYSRHGRVKDARLIFDQMVE 311
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A061EMY0_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_020645 PE=4 SV=1) HSP 1 Score: 778.089 bits (2008), Expect = 0.000e+0 Identity = 367/419 (87.59%), Postives = 395/419 (94.27%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDLV WSAMISGYAESDQPQEALRLF ELQ LG+RPDQVTMLSVISACA+LGVL+KAKWIHVYADKNGFGG+L INNALIDM+AKCGSLERAR VFEKMT RNVISWT MINAFAIHGDANNAL +F KMKEA VEPNGVTFVGVLYACSHAGLV++G++IFASMINEH I PKHEHYGCMVDL GRANLLREA+EIVETMP APNVVIWGSLM+ACQIHGETELGEF AKR+LELEPDHDGALVLLSNIYAKE+KWQ+VG+LR LMKERGISKE+G SRIELNNEVHEFL+ADRNHKQA +IYEKL+EV+S+LKL GY PNT VLVDLEEEEKREVVLWHSEKLALCYGLING KDSCIRIVKNLRVCEDCHTF+KLVSK+Y REI+VRDRTRFHHY+DG+CSC+DYW Sbjct: 304 RLIFDQMVEKDLVCWSAMISGYAESDQPQEALRLFNELQSLGMRPDQVTMLSVISACAHLGVLEKAKWIHVYADKNGFGGALPINNALIDMHAKCGSLERARGVFEKMTRRNVISWTSMINAFAIHGDANNALSFFHKMKEAHVEPNGVTFVGVLYACSHAGLVDEGQRIFASMINEHKIAPKHEHYGCMVDLFGRANLLREALEIVETMPLAPNVVIWGSLMAACQIHGETELGEFAAKRLLELEPDHDGALVLLSNIYAKEKKWQDVGELRHLMKERGISKEKGCSRIELNNEVHEFLMADRNHKQADKIYEKLDEVISQLKLVGYFPNTRSVLVDLEEEEKREVVLWHSEKLALCYGLINGEKDSCIRIVKNLRVCEDCHTFMKLVSKLYGREIVVRDRTRFHHYKDGLCSCKDYW 722 HSP 2 Score: 120.939 bits (302), Expect = 5.460e-26 Identity = 78/283 (27.56%), Postives = 135/283 (47.70%), Query Frame = -2 Query: 619 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLER-------------------------------ARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGR--KIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPD 1362 R +FD+M +D+V+WS MI GY S +AL LF+E++ I D+ + S++SAC +G L+ K IH Y + + +AL+ MYA CG +E AR +F++M ++++ W+ MI+ +A ALR F +++ + P+ VT + V+ AC+H G++E + ++A P + ++D+ + L A + E M NV+ W S+++A IHG+ L F + +EP+ Sbjct: 172 RSVFDKMSYRDIVAWSIMIDGYCLSGLFDDALELFEEMKRANIEVDKFILSSILSACGRVGNLNHGKAIHDYIIEKILVVDSHLQSALMTMYASCGCMEMAQKLFNQMAPKNLVVSTAMVSGYSRHRRIEDARLIFDQMVEKDLVCWSAMISGYAESDQPQEALRLFNELQSLGMRPDQVTMLSVISACAHLGVLEKAKWIHVYADKNGFGGALPIN---NALIDMHAKCGSLERARGVFEKMT-RRNVISWTSMINAFAIHGDANNALSFFHKMKEAHVEPN 450 HSP 3 Score: 94.7449 bits (234), Expect = 1.738e-17 Identity = 59/223 (26.46%), Postives = 111/223 (49.78%), Query Frame = -2 Query: 631 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAP-NVVIWGSLMSACQIHGETELGEFTAKRVLE 1296 + S +P+ AL +++ L+ GI+ D+ T ++ A A + L + K IH + K G + L+ MY CG + AR+VF+KM+ R++++W+ MI+ + + G ++AL F++MK A +E + +L AC G + G+ I +I + + H M + + A ++ M AP N+V+ +++S H E +++E Sbjct: 93 SRSSRPEFALFVYQRLRNEGIKIDRFTFPPLLKAVARVEGLAEGKEIHGFGFKLGLDSDPFVQTGLVGMYLACGRVLEARSVFDKMSYRDIVAWSIMIDGYCLSGLFDDALELFEEMKRANIEVDKFILSSILSACGRVGNLNHGKAIHDYIIEKILVVDSHLQSALMT-MYASCGCMEMAQKLFNQM--APKNLVVSTAMVSGYSRHRRIEDARLIFDQMVE 312
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: B9HUV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s09620g PE=4 SV=2) HSP 1 Score: 719.153 bits (1855), Expect = 0.000e+0 Identity = 335/419 (79.95%), Postives = 376/419 (89.74%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQM EKDLV WSAMISGYAESD+PQEAL LF E+Q+ GI+PDQVT+LSVISACA LGVLD+AKWIH+Y DKNG GG+L +NNALIDMYAKCG+L AR VFEKM SRNVISWT MINAFAIHGDA+NAL++F +MK+ ++PNGVTFVGVLYACSHAGLVE+GR+ FASM NEHNITPKHEHYGCMVDL GRANLLR+A+E+VETMP APNVVIWGSLM+ACQIHGE ELGEF AK+VLELEPDHDGALV LSNIYAK+R+WQ+VG+LR LMK+RGISKERG SRIELNN+V+EF++AD+ HKQA +IYEKL+EVV LKL GY PNT VLVD+EEE K+EVVLWHSEKLALCYGL+ K SCIRIVKNLRVCEDCHTF+KLVSKVY EIIVRDRTRFHHY+ GVCSC DYW Sbjct: 303 RLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 721 HSP 2 Score: 124.79 bits (312), Expect = 2.719e-27 Identity = 72/263 (27.38%), Postives = 134/263 (50.95%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M +D+V+WS MI GY +S + L+LF+E++ ++PD++ + ++ISAC L + IH + +N F + +AL+ MYA CG +E A+ +F K++SRN ++ W+ MI+ +A AL F +M+ ++P+ VT + V+ AC+ G+++ + I ++++ + ++D+ + L A + E M + NV+ W S+++A IHG+ Sbjct: 171 RLVFDKMSYRDVVAWSIMIDGYHQSGLYDDVLQLFEEMRSSNLKPDEMVLTTIISACGRARNLSYGEAIHDFIIENNFVLDTYLQSALLTMYASCGCMEMAQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHM-YVDKNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQ-SRNVISWTSMINAFAIHGDA 431 HSP 3 Score: 79.7221 bits (195), Expect = 1.385e-12 Identity = 43/152 (28.29%), Postives = 84/152 (55.26%), Query Frame = -2 Query: 853 AESDQPQEALRLFKELQI----LGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKI 1296 + S +P+ AL ++++++ LGI D+ + ++ A + L++ K IH A K GF + L+ MYA C + AR VF+KM+ R+V++W+ MI+ + G ++ L+ F++M+ + ++P+ + ++ AC A + G I Sbjct: 90 SRSAKPETALLAYEKIRLKEGLLGI--DRFSFPPLLKAASRASGLNEGKEIHGVATKLGFDKDPFVQTGLVGMYASCDRISEARLVFDKMSYRDVVAWSIMIDGYHQSGLYDDVLQLFEEMRSSNLKPDEMVLTTIISACGRARNLSYGEAI 239
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A067GGS0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004938mg PE=4 SV=1) HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0 Identity = 321/419 (76.61%), Postives = 376/419 (89.74%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDL+ WSAMISGYAE++ PQEAL+LF E+Q+ G++PD+VTMLSVISACA+LGVLD+A+ IH+Y DKN FGG LR+NNA+IDMYAKCGSLE AR VFE+M RNVISWT MINAFAIHGDA NAL +F KMK+ ++PNGVTF+GVLYACSHAGLV++GR+IFASM NE+NI PK+EHYGCMVDL GRANLLREA+E+VETMPFAPNVVIWGSLM+AC++HGE EL EF AK++L+L+PDHDGALVLLSNIYAK+++WQ+VG+LR+ MKERGI KER SRIE+NNEV+EFL ADR+HKQ +IYEKLNEV+S LK GY P+ LVDLE+EEKREV+LWHSEKLALCYGLI+ KDSCIRIVKNLRVCEDCH F+KLVSKVY REI++RDRTRFHHY+DGVCSC+DYW Sbjct: 304 RLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHDGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIRIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722 HSP 2 Score: 128.642 bits (322), Expect = 1.653e-28 Identity = 72/263 (27.38%), Postives = 132/263 (50.19%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSL-------------------------------ERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M +D+V WS MI GY ++ E L LF+E+++ + PD++ + ++SAC+ G L + +H + N + + LI MYA CG + E AR +F++M +++I W+ MI+ +A + AL+ F +M+ ++P+ VT + V+ AC+H G+++ ++I I+++ ++D+ + L A E+ E M NV+ W S+++A IHG+ Sbjct: 172 RLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHL-YIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINAFAIHGDA 432 HSP 3 Score: 92.4337 bits (228), Expect = 1.264e-16 Identity = 69/287 (24.04%), Postives = 128/287 (44.60%), Query Frame = -2 Query: 592 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMIN---------EHNITPKHEHYGC---------------------MVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMS--ACQIHGETELGEFTAKRVLELEPDHDGALVLLS 1356 IF Q+ + I + S +P+ AL++F ++ G+ D+ + ++ A A L + +H K GFG + L+ MY CG + AR +F+KM+ R+++ W+ MI+ + +G + L F++MK + VEP+ + +L ACS AG + G + +I+ + + + + GC MV RA + +A I + M +++ W +++S A H + L F +V ++PD L ++S Sbjct: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQM-VEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVIS 358
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: V4S8H9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004433mg PE=4 SV=1) HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0 Identity = 319/419 (76.13%), Postives = 375/419 (89.50%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDL+ WSAMISGYAE++ PQEAL+LF E+Q+ G++PD+VTMLSVISACA+LGVLD+A+ IH+Y DKN FGG LR+NNA+IDMYAKCGSLE AR VFE+M RNVISWT MINAFAIHGDA NAL +F KMK+ ++PNGVTF+GVLYACSHAGLV++GR+IFASM NE+NI PK+EHYGCMVDL GRANLLREA+E+VETMPFAPNVVIWGSLM+AC++HGE EL EF AK++L+L+PDH+GALVLLSNIYAK+++WQ+VG+LR+ MKERGI KER SRIE+NNEV+EFL ADR+HKQ +IYEKLNEV+S LK GY P+ LVDLE+EEKREV+LWHSEKLALCYGLI+ KDSCI IVKNLRVCEDCH F+KLVSKVY REI++RDRTRFHHY+DGVCSC+DYW Sbjct: 304 RLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHLYIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMRRRNVISWTSMINAFAIHGDARNALIFFNKMKDESIDPNGVTFIGVLYACSHAGLVDEGREIFASMTNEYNIPPKYEHYGCMVDLFGRANLLREALELVETMPFAPNVVIWGSLMAACRVHGEIELAEFAAKQLLQLDPDHNGALVLLSNIYAKDKRWQDVGELRKSMKERGILKERACSRIEMNNEVYEFLTADRSHKQTDQIYEKLNEVISELKPAGYVPDIHSALVDLEDEEKREVILWHSEKLALCYGLISSKKDSCIYIVKNLRVCEDCHNFIKLVSKVYAREIVIRDRTRFHHYKDGVCSCKDYW 722 HSP 2 Score: 127.102 bits (318), Expect = 4.508e-28 Identity = 71/263 (27.00%), Postives = 132/263 (50.19%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSL-------------------------------ERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M +D+V WS MI GY ++ + L LF+E+++ + PD++ + ++SAC+ G L + +H + N + + LI MYA CG + E AR +F++M +++I W+ MI+ +A + AL+ F +M+ ++P+ VT + V+ AC+H G+++ ++I I+++ ++D+ + L A E+ E M NV+ W S+++A IHG+ Sbjct: 172 RLMFDKMSYRDIVPWSVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVISACAHLGVLDQAQRIHL-YIDKNAFGGDLRVNNAIIDMYAKCGSLESAREVFERMR-RRNVISWTSMINAFAIHGDA 432 HSP 3 Score: 92.4337 bits (228), Expect = 9.727e-17 Identity = 69/287 (24.04%), Postives = 129/287 (44.95%), Query Frame = -2 Query: 592 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMIN---------EHNITPKHEHYGC---------------------MVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMS--ACQIHGETELGEFTAKRVLELEPDHDGALVLLS 1356 IF Q+ + I + S +P+ AL++F ++ G+ D+ + ++ A A L + +H K GFG + L+ MY CG + AR +F+KM+ R+++ W+ MI+ + +G ++ L F++MK + VEP+ + +L ACS AG + G + +I+ + + + + GC MV RA + +A I + M +++ W +++S A H + L F +V ++PD L ++S Sbjct: 73 IFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKAIARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMSYRDIVPWSVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIIDNNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLIFDQM-VEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVTMLSVIS 358
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: W9R134_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1) HSP 1 Score: 694.886 bits (1792), Expect = 0.000e+0 Identity = 326/419 (77.80%), Postives = 381/419 (90.93%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQMVEKDLVSWSAMI+GYAESD PQEALRLF ++Q+LGIRPDQ+TMLSVISACA+LG LDKA W+H+YAD+NGFGG+L ++NAL+DMYAKCGSLERAR VFEKM +NVISWT MINA A+HGDA NAL F +MK+ VEPN VTFVGVLYACSH GLVE+GR IFASMINE+NI PKHEHYGCMVDL GRANLLREA+E++ETMP APNV+IWGSLM+AC+IHGE ELGEF AKR+LELEPDHDGA V+LSNIYAKER+W++VG++R+LMK+ GI KERG+SRIE N+EVHEFL+ADRNHKQA +IYEKL+ +VS L+L GYAPNT VLVDLEEEEK+EVVLWHSEKLAL YGLI+ +K+SCIR+VKNLR+CEDCHTF+KL SKVY +EI+VRDRTRFHH+++G+CSC+DYW Sbjct: 310 RLIFDQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDMQLLGIRPDQITMLSVISACAHLGALDKANWMHIYADRNGFGGALPVSNALVDMYAKCGSLERAREVFEKMQRKNVISWTSMINACAMHGDAVNALSLFHRMKDKNVEPNSVTFVGVLYACSHTGLVEEGRNIFASMINEYNIAPKHEHYGCMVDLFGRANLLREALEVIETMPVAPNVIIWGSLMAACRIHGENELGEFAAKRLLELEPDHDGAHVVLSNIYAKERRWEDVGNMRKLMKDSGILKERGFSRIESNSEVHEFLMADRNHKQADQIYEKLDNIVSDLRLAGYAPNTSSVLVDLEEEEKKEVVLWHSEKLALSYGLISESKESCIRVVKNLRICEDCHTFMKLSSKVYGKEIVVRDRTRFHHFKEGICSCKDYW 728 HSP 2 Score: 137.887 bits (346), Expect = 1.539e-31 Identity = 78/265 (29.43%), Postives = 133/265 (50.19%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGR--KIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M ++D+V+WS MI GY++S L++E++ G+ PD++ + +++SAC G L K IH + +N R+ +AL+ MYA CGS++ A+ +F+KM+S+N ++SW+ MI +A ALR F M+ + P+ +T + V+ AC+H G ++ I+A P +VD+ + L A E+ E M NV+ W S+++AC +HG+ Sbjct: 178 RLVFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEMILSTILSACGRAGNLSCGKAIHDFVVENSLLADSRLRSALVAMYASCGSMDIAQELFDKMSSKNLVVSTAMISGYSKLGRLQDARLIFDQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDMQLLGIRPDQITMLSVISACAHLGALDKANWMHIYADRNGFGGALPVS---NALVDMYAKCGSLERAREVFEKMQ-RKNVISWTSMINACAMHGDA 438 HSP 3 Score: 83.5741 bits (205), Expect = 8.428e-14 Identity = 53/214 (24.77%), Postives = 104/214 (48.60%), Query Frame = -2 Query: 634 EALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVL 1275 + L ++ ++ G D+ + +V+ A L++ + IH A K GF + L+ MYA CG + R VF+KM+ R+V++W+ MI+ ++ +N +++M+ + VEP+ + +L AC AG + G+ I + E+++ +V + + A E+ + M + N+V+ S I G ++LG R++ Sbjct: 106 KTLLVYGRMRREGSSVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGRILDGRLVFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEMILSTILSACGRAGNLSCGKAIH-DFVVENSLLADSRLRSALVAMYASCGSMDIAQELFDKMS-SKNLVV-----STAMISGYSKLGRLQDARLI 312
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: D7T700_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=1) HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0 Identity = 324/419 (77.33%), Postives = 375/419 (89.50%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +F+QMV+KDLV WSAMISGYAESD PQEAL LF E+Q LGI+PDQVTMLSVI+ACA+LG LD+AKWIH++ DKNGFGG+L INNALI+MYAKCGSLERAR +F+KM +NVISWT MI+AFA+HGDA +ALR+F +M++ +EPNG+TFVGVLYACSHAGLVE+GRKIF SMINEHNITPKH HYGCMVDL GRANLLREA+E+VE MP APNV+IWGSLM+AC++HGE ELGEF AKR+LEL+PDHDGA V LSNIYAK R+W++VG +R+LMK +GISKERG SR ELNNE+HEFLVADR+HK A EIYEKL EVVS+LKL GY+PNT +LVDLEEEEK+EVVLWHSEKLALCYGL+ SCIRI+KNLRVCEDCHTF+KL SKVY REI+VRDRTRFHHY+DGVCSC+DYW Sbjct: 309 RSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727 HSP 2 Score: 138.272 bits (347), Expect = 9.781e-32 Identity = 76/263 (28.90%), Postives = 133/263 (50.57%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVIS-------------------------------WTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD+M +D+V+WS MI GY +S +AL LF+E++ + PD++ + +V+SAC G L K IH + +N + +AL+ MYA CGS++ A N+FEKMT +N+++ W+ MI+ +A AL F +M+ ++P+ VT + V+ AC+H G ++ + I ++++ ++++ + L A I + MP NV+ W ++SA +HG+ Sbjct: 177 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHL-FVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGDA 437 HSP 3 Score: 97.8265 bits (242), Expect = 1.848e-18 Identity = 73/267 (27.34%), Postives = 129/267 (48.31%), Query Frame = -2 Query: 508 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEF-TAKRVLELEPDHDGALVLLSNI---YAKERKWQNVGDLRQLMKERGISKER 1296 + S++P++ L +++ ++ G+ D+ + ++ A + + L + IH A K GF + L+ MYA CG + AR +F+KM R+V++W+ MI+ + G N+AL F++MK VEP+ + VL AC AG + G K+ I E+NI +V + + A+ + E M P ++ + M + G ++LG+ A+ V D LV S + YA+ Q +L M+ GI ++ Sbjct: 98 SRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG-KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKM--TPKNLVASTAM----VTGYSKLGQIENARSVFNQMVKKD--LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQ 355
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A067L6S3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02188 PE=4 SV=1) HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0 Identity = 319/419 (76.13%), Postives = 362/419 (86.40%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFD+M +KDLV WSAMISGYAESDQPQEAL LF E+Q LGI PD+VTMLSVISACA+LGVLD+AK IH++ +++GFGG L +NNALIDMYAKCG LE AR VFEKM RNVISWT MINAFAIHGDAN+AL +F +MK+ +EPN VTFVGVLYACSHAGLVE+G+KIFASMIN++NI+PKHEHYGCMVDL GRA LREA+ +VETM PNVVIWGSLM+AC++HGETELGEF A+R+LELEP HDGALVLLSNIYAKE++WQ+VG +R LMK+RGI KERG SRIEL+N VHEF ADR HKQA IYEKL+EVV LK GY+P+T VLVD+EEE K EVVLWHSEKLALCYGLI+ K SCIRIVKNLR+CEDCH F+KLVSK Y EIIVRDRTRFH Y+DGVCSC DYW Sbjct: 305 RLIFDEMDKKDLVCWSAMISGYAESDQPQEALNLFNEMQALGIEPDEVTMLSVISACAHLGVLDQAKRIHMFVNESGFGGVLPVNNALIDMYAKCGCLEAARAVFEKMQRRNVISWTSMINAFAIHGDANSALNFFHRMKDENIEPNAVTFVGVLYACSHAGLVEEGQKIFASMINDYNISPKHEHYGCMVDLFGRAKFLREALNLVETMSLPPNVVIWGSLMAACRVHGETELGEFAAQRLLELEPGHDGALVLLSNIYAKEKRWQDVGQIRNLMKQRGIFKERGCSRIELSNGVHEFSTADRKHKQADLIYEKLDEVVGNLKFVGYSPDTSVVLVDIEEEAKNEVVLWHSEKLALCYGLISQGKGSCIRIVKNLRICEDCHNFMKLVSKAYELEIIVRDRTRFHRYKDGVCSCNDYW 723 HSP 2 Score: 140.584 bits (353), Expect = 1.736e-32 Identity = 84/294 (28.57%), Postives = 148/294 (50.34%), Query Frame = -2 Query: 580 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGE--TELGEFTAKRVLELEPDHDGALVLLSNIYA 1362 RL+FD+M +D+V+WS MI+GY ++ EAL+ F+E++ ++PD+V + ++ISAC+ G L K +H + +N + + LI MYA CG ++ A+ +F KM+SRN ++ W+ MI+ +A AL F +M+ +EP+ VT + V+ AC+H G+++ ++I +NE ++D+ + L A + E M NV+ W S+++A IHG+ + L F + +EP+ A+ + +YA Sbjct: 173 RLVFDKMSYRDVVTWSIMINGYYQNGHFDEALKFFEEMKSSNVQPDKVVLSTIISACSRAGNLSYGKAVHDFIIENNIEVDPHLESTLIFMYANCGCMDMAKELFFKMSSRNLVVSTAMVSGYSRVGNVKDARLIFDEMDKKDLVCWSAMISGYAESDQPQEALNLFNEMQALGIEPDEVTMLSVISACAHLGVLDQAKRIHM-FVNESGFGGVLPVNNALIDMYAKCGCLEAARAVFEKMQ-RRNVISWTSMINAFAIHGDANSALNFFHRMKDENIEPN---AVTFVGVLYA 461 HSP 3 Score: 97.4413 bits (241), Expect = 2.397e-18 Identity = 86/345 (24.93%), Postives = 165/345 (47.83%), Query Frame = -2 Query: 307 AESDQPQEALRLFKELQ---ILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNI--YAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNE-------VVSRLKLDGYAPNTGCVLVD---LEEEEKREVVLWHS 1296 + S +P+ L ++++++ + G+ D+ ++ ++ A A + L++ IH A K GF + L+ +Y CG + AR VF+KM+ R+V++W+ MIN + +G + AL++F++MK + V+P+ V ++ ACS AG + G+ + +I E+NI ++ + + A E+ M + N+V+ S + G + +G R++ E D + + I YA+ + Q +L M+ GI + + + + + V D QA I+ +NE V+ +D YA GC+ E+ ++R V+ W S Sbjct: 93 SRSSKPETVLLVYEKIREDGLFGV--DRFSLPLLLKAAAKVSALNEGMEIHGVATKLGFDKDPFVQTGLMSLYLACGKILEARLVFDKMSYRDVVTWSIMINGYYQNGHFDEALKFFEEMKSSNVQPDKVVLSTIISACSRAGNLSYGKAVHDFII-ENNIEVDPHLESTLIFMYANCGCMDMAKELFFKMS-SRNLVV-----STAMVSGYSRVGNVKDARLIFDEMDKKDLVCWSAMISGYAESDQPQEALNLFNEMQALGIEPDE-VTMLSVISACAHLGVLD----QAKRIHMFVNESGFGGVLPVNNALIDMYA-KCGCLEAARAVFEKMQRRNVISWTS 422
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Match: A0A059D1A8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01082 PE=4 SV=1) HSP 1 Score: 681.019 bits (1756), Expect = 0.000e+0 Identity = 306/419 (73.03%), Postives = 371/419 (88.54%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 RLIFDQ+ EKDLV WSAMISGYAESDQPQEAL LFK++Q+ GI+PDQVT+LS +SACA+LG LD+ +W+H Y D+NGFG +L + N LIDMYAKCGSLERA+ VFEK +S+NVISWT MIN+FA+HGDANN LR+F +MKE VEPN +TF+GVLYACSHAGLVE G++IF+SM++EHN+ PKHEHYGCMVDL GRA LLREA+E++ETMP APNVVIWGSLM+AC++HGE ELGEF AK++L+LEPDHDGA V+LSNIYAK R+WQ+VG+LRQLM++RG+ K RG+SRIELNNEVH+F +ADR+H QA +I+ KL+EVV LKL GYAP+ CVLVD+E+E+K EVVLWHSEKLA+CYGL+ SCIRI+KNLR+CEDCHTF+KL+SK YRREIIVRDRTRFHH++DG+CSCRDYW Sbjct: 309 RLIFDQLDEKDLVCWSAMISGYAESDQPQEALTLFKKMQMWGIKPDQVTILSALSACAHLGALDQGRWMHKYVDENGFGEALPVKNVLIDMYAKCGSLERAQKVFEKTSSKNVISWTTMINSFAMHGDANNVLRFFYQMKEENVEPNEITFIGVLYACSHAGLVEKGQEIFSSMVSEHNLKPKHEHYGCMVDLFGRAGLLREALEVIETMPLAPNVVIWGSLMAACRVHGEDELGEFAAKQLLKLEPDHDGAHVVLSNIYAKHRRWQDVGELRQLMRQRGVFKARGWSRIELNNEVHQFAMADRDHNQADQIFVKLDEVVRELKLVGYAPSAHCVLVDVEDEDKSEVVLWHSEKLAVCYGLLTERTGSCIRIIKNLRICEDCHTFMKLISKEYRREIIVRDRTRFHHFKDGICSCRDYW 727 HSP 2 Score: 126.331 bits (316), Expect = 9.737e-28 Identity = 72/263 (27.38%), Postives = 131/263 (49.81%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRN-------------------------------VISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 RL+FD M ++D+VSWS MI G+ ++ EA+ LF+E++ + PD++ + S++SAC G L K IH Y +N I +ALI MYA G ++ A+ +F+ M+ +N ++ W+ MI+ +A AL F+KM+ ++P+ VT + L AC+H G ++ GR + ++E+ ++D+ + L A ++ E + NV+ W +++++ +HG+ Sbjct: 177 RLLFDTMSQRDVVSWSIMIDGFCQNGLFDEAMSLFEEMRRSNVEPDRMILSSILSACGRAGNLSYGKKIHDYITENNVILDPHIWSALISMYASSGCMDLAQELFDSMSPKNLVVSTAMISWYSKVRKMENARLIFDQLDEKDLVCWSAMISGYAESDQPQEALTLFKKMQMWGIKPDQVTILSALSACAHLGALDQGRWMH-KYVDENGFGEALPVKNVLIDMYAKCGSLERAQKVFEKTS-SKNVISWTTMINSFAMHGDA 437 HSP 3 Score: 97.0561 bits (240), Expect = 3.402e-18 Identity = 57/202 (28.22%), Postives = 108/202 (53.47%), Query Frame = -2 Query: 691 AESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMS 1296 + D+P +AL +F E+ G+ D+ + ++ A + L + IH K G+GG + AL+ MYA G + AR +F+ M+ R+V+SW+ MI+ F +G + A+ F++M+ + VEP+ + +L AC AG + G+KI I E+N+ + ++ + + + A E+ ++M N+V+ +++S Sbjct: 98 SRGDRPGDALIVFDEMWREGVVLDRFSFPPLLKAGSKEVGLVEGSEIHGLVVKLGYGGDPFVQTALVRMYAAGGRIVDARLLFDTMSQRDVVSWSIMIDGFCQNGLFDEAMSLFEEMRRSNVEPDRMILSSILSACGRAGNLSYGKKIH-DYITENNVILDPHIWSALISMYASSGCMDLAQELFDSMS-PKNLVVSTAMIS 297
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 407.142 bits (1045), Expect = 2.807e-133 Identity = 190/422 (45.02%), Postives = 278/422 (65.88%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKD-----SCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +F +M +K LVSW+ MI Y ++ P EA+ L+ ++ G PD V++ SV+ AC + L K IH Y ++ +L + NALIDMYAKCG LE+AR+VFE M SR+V+SWT MI+A+ G +A+ F K++++ + P+ + FV L ACSHAGL+E+GR F M + + ITP+ EH CMVDLLGRA ++EA ++ M PN +WG+L+ AC++H +T++G A ++ +L P+ G VLLSNIYAK +W+ V ++R +MK +G+ K G S +E+N +H FLV DR+H Q+ EIY +L+ +V ++K GY P++ L D+EEE+K + HSEKLA+ + L+N ++ + IRI KNLR+C DCH KL+S++ REII+RD RFH +R GVCSC DYW Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686 HSP 2 Score: 103.605 bits (257), Expect = 2.522e-22 Identity = 77/296 (26.01%), Postives = 141/296 (47.64%), Query Frame = -2 Query: 520 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGL--VEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMP---FAPNVVIWGSLMSAC----------QIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGI 1362 R +FD++ E++++ + MI Y + E +++F + +RPD T V+ AC+ G + + IH A K G +L + N L+ MY KCG L AR V ++M+ R+V+SW ++ +A + ++AL ++M+ ++ + T +L A S+ V + +F M + ++ + M+ + + + EAVE+ M F P+ V S++ AC +IHG E + +LE AL+ ++YAK + D+ + MK R + Sbjct: 94 RKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE------NALI---DMYAKCGCLEKARDVFENMKSRDV 375 HSP 3 Score: 71.633 bits (174), Expect = 5.224e-12 Identity = 40/150 (26.67%), Postives = 77/150 (51.33%), Query Frame = -2 Query: 919 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAK-WIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMT-SRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNG 1362 R +F+ M +D+VSW+AMIS Y S + +A+ LF +LQ G+ PD + ++ ++AC++ G+L++ + + D L ++D+ + G ++ A + M+ N W ++ A +H D + L K+ + E +G Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513 HSP 4 Score: 58.5362 bits (140), Expect = 6.849e-8 Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = -2 Query: 694 LRINNAL----IDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLM 1119 LR N++L + YA + AR VF+++ RNVI MI ++ +G ++ F M V P+ TF VL ACS +G + GRKI S + G +V + G+ L EA +++ M +VV W SL+ Sbjct: 70 LRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG-LVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 4.827e-133 Identity = 191/426 (44.84%), Postives = 287/426 (67.37%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILG-----IRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSR-NVISWTGMINAFAIHGDANNALRYFQKMKEA-RVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD+M E++++SWS +I+GY + +EAL LF+E+Q+ +RP++ TM +V+SAC LG L++ KW+H Y DK + + ALIDMYAKCGSLERA+ VF + S+ +V +++ MI A++G + + F +M + + PN VTFVG+L AC H GL+ +G+ F MI E ITP +HYGCMVDL GR+ L++EA + +MP P+V+IWGSL+S ++ G+ + E KR++EL+P + GA VLLSN+YAK +W V +R M+ +GI+K G S +E+ VHEF+V D + +++ IY L+E++ RL+ GY +T VL+DL E++K + +HSEKLA+ + L+ + +RI+KNLR+C DCH +K++SK++ REI+VRD RFHH+RDG CSCRD+W Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573 HSP 2 Score: 78.9518 bits (193), Expect = 2.124e-14 Identity = 55/231 (23.81%), Postives = 110/231 (47.62%), Query Frame = -2 Query: 664 VEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMK-----EARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1341 V D ++ ++ + R ++ + G+ D S+++ ++ G L A+ + D +G L N++++ YAK G ++ AR +F++M RNVISW+ +IN + + G AL F++M+ EA V PN T VL AC G +E G+ + A I+++++ ++D+ + L A + + +V + +++ ++G T+ Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF---DDSG-SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHA-YIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 5.718e-132 Identity = 195/417 (46.76%), Postives = 278/417 (66.67%), Query Frame = -2 Query: 106 FDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQIL-GIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1353 F+ M EK++VSW+ +ISG + +EA+ +F +Q G+ D VTM+S+ SAC +LG LD AKWI+ Y +KNG +R+ L+DM+++CG E A ++F +T+R+V +WT I A A+ G+A A+ F M E ++P+GV FVG L ACSH GLV+ G++IF SM+ H ++P+ HYGCMVDLLGRA LL EAV+++E MP PN VIW SL++AC++ G E+ + A+++ L P+ G+ VLLSN+YA +W ++ +R MKE+G+ K G S I++ + HEF D +H + I L+EV R G+ P+ VL+D++E+EK ++ HSEKLA+ YGLI+ K + IRIVKNLRVC DCH+F K SKVY REII+RD RFH+ R G CSC D+W Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842 HSP 2 Score: 111.309 bits (277), Expect = 8.946e-25 Identity = 79/247 (31.98%), Postives = 121/247 (48.99%), Query Frame = -2 Query: 589 WSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKM-KEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE--LGEFTAKRVLELEPDHDGALVLLSN 1320 ++++I GYA S EA+ LF + GI PD+ T +SACA IH K G+ L + N+L+ YA+CG L+ AR VF++M+ RNV+SWT MI +A A +A+ F +M ++ V PN VT V V+ AC+ +E G K++A I I +VD+ + N + A + + A N+ + ++ S G T LG F + PD L +S+ Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA-FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG-ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346 HSP 3 Score: 100.138 bits (248), Expect = 4.593e-21 Identity = 54/178 (30.34%), Postives = 96/178 (53.93%), Query Frame = -2 Query: 823 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNI 1356 +FD+ +L +AM S Y +EAL +F + G+RPD+++MLS IS+C+ L + K H Y +NGF I NALIDMY KC + A +F++M+++ V++W ++ + +G+ + A F+ M E + V++ ++ L E+ ++F SM ++ + Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466 HSP 4 Score: 96.6709 bits (239), Expect = 5.217e-20 Identity = 50/161 (31.06%), Postives = 95/161 (59.01%), Query Frame = -2 Query: 883 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLF-KELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSH 1362 R +FD+M E+++VSW++MI GYA D ++A+ LF + ++ + P+ VTM+ VISACA L L+ + ++ + +G + + +AL+DMY KC +++ A+ +F++ + N+ M + + G AL F M ++ V P+ ++ + + +CS Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 6.167e-131 Identity = 186/417 (44.60%), Postives = 276/417 (66.19%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +FD+M ++D VSW+AMI+GY++S EALRLF +++ G R ++ + S +S CA++ L+ K +H K G+ + NAL+ MY KCGS+E A ++F++M ++++SW MI ++ HG ALR+F+ MK ++P+ T V VL ACSH GLV+ GR+ F +M ++ + P +HY CMVDLLGRA LL +A +++ MPF P+ IWG+L+ A ++HG TEL E A ++ +EP++ G VLLSN+YA +W +VG LR M+++G+ K GYS IE+ N+ H F V D H + EI+ L E+ R+K GY T VL D+EEEEK +V +HSE+LA+ YG++ + IR++KNLRVCEDCH +K ++++ R II+RD RFHH++DG CSC DYW Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781 HSP 2 Score: 88.9669 bits (219), Expect = 1.961e-17 Identity = 73/294 (24.83%), Postives = 131/294 (44.56%), Query Frame = -2 Query: 592 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAK-------------WIHVYADKNGFGGSLRIN-----------------NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVD-----LLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIH--GETELGEFTAKRVLELEPDHDGALVLLS 1362 R FD M +D+VSW+ +I+GYA+S + EA +LF E + D T +++S ++++A+ W + A G+ R+ N +I YA+CG + A+N+F+KM R+ +SW MI ++ G + ALR F +M+ N +F L C+ +E G+++ ++ T GC V + + + EA ++ + M ++V W ++++ H GE L F + + L+PD + +LS Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLA---GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET------GCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518 HSP 3 Score: 66.6254 bits (161), Expect = 2.072e-10 Identity = 56/237 (23.63%), Postives = 107/237 (45.15%), Query Frame = -2 Query: 667 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRIN-----NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET 1362 R +FD+M EK+ VSW+A++S Y ++ + +EA LFK + + V C G + K K + + F S+ + N +I YA+ G ++ AR +F++ ++V +WT M++ + + A F KM E N V++ +L +E +++F M + T + M+ + + EA + + MP + V W ++++ G + Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL---------VSWNCLLGGFVKKKKIV----EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST-----WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390 HSP 4 Score: 65.4698 bits (158), Expect = 5.045e-10 Identity = 66/278 (23.74%), Postives = 121/278 (43.53%), Query Frame = -2 Query: 613 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIH-VYADKNGFGGSLRIN--------------------------NALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFT-AKRVLELEPDHD 1362 R +FD+M E+DLVSW+ MI GY + +A LF +I+ R D + +++S A G +D A+ + +KN + ++ N L+ + K + AR F+ M R+V+SW +I +A G + A + F E+ V+ + T+ ++ +VE+ R++F M + ++ + M+ + + A E+ + MP NV W ++ I G + G+ + AK + + P D Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF---EIMPER-DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD---ESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAKELFDVMP-CRNVSTWNTM-----ITGYAQCGKISEAKNLFDKMPKRD 373 HSP 5 Score: 61.2326 bits (147), Expect = 1.173e-8 Identity = 63/272 (23.16%), Postives = 121/272 (44.49%), Query Frame = -2 Query: 526 EKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHD-GALVLLSNIYAKERKWQNVGDLRQLMKER 1338 + D+ W+ IS Y + + EALR+FK + R V+ +IS G + A+ + + L N +I Y + +L +AR +FE M R+V SW M++ +A +G ++A F +M E N V++ +L A +E+ +F S N ++ + C++ + + EA + ++M +VV W ++++ G+ + A+++ + P D + + Y + R + +L M ER Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WNCLLGGFVKKKKIVEARQFFDSMN-VRDVVSWNTIITGYAQSGKID----EARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 398.667 bits (1023), Expect = 9.722e-131 Identity = 191/417 (45.80%), Postives = 274/417 (65.71%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +FD+MV D + W+++I G+A++ + AL LFK ++ G +Q T+ SV+ AC L +L+ HV+ K + L +NNAL+DMY KCGSLE A VF +M R+VI+W+ MI+ A +G + AL+ F++MK + +PN +T VGVL+ACSHAGL+EDG F SM + I P EHYGCM+DLLG+A L +AV+++ M P+ V W +L+ AC++ L E+ AK+V+ L+P+ G LLSNIYA +KW +V ++R M++RGI KE G S IE+N ++H F++ D +H Q E+ +KLN+++ RL GY P T VL DLE E+ + + HSEKLAL +GL+ + IRI KNLR+C DCH F KL SK+ R I++RD R+HH++DG CSC DYW Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630 HSP 2 Score: 104.76 bits (260), Expect = 9.230e-23 Identity = 63/232 (27.16%), Postives = 120/232 (51.72%), Query Frame = -2 Query: 664 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMIN-EHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1356 +FDQM +++++SW+ MIS Y++ Q+AL L + +RP+ T SV+ +C + + +H K G + + +ALID++AK G E A +VF++M + + I W +I FA + ++ AL F++MK A T VL AC+ L+E G + ++ + ++ + +VD+ + L +A+ + M +V+ W +++S +G ++ Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQ 341 HSP 3 Score: 68.9366 bits (167), Expect = 3.552e-11 Identity = 52/210 (24.76%), Postives = 94/210 (44.76%), Query Frame = -2 Query: 688 ESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACS--------HAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1293 + D P+ A++ LQ G+ D T +I C + + + I + NG + + N LI+MY K L A +F++M RNVISWT MI+A++ AL M V PN T+ VL +C+ H G++++G E ++ + ++D+ + +A+ + + M + ++W S++ Sbjct: 39 QRDLPR-AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGL--------ESDVFVR----SALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGG 234
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 392.504 bits (1007), Expect = 1.461e-127 Identity = 180/419 (42.96%), Postives = 280/419 (66.83%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 +++FD+M +L+ W+AMISGYA++ +EA+ +F E+ +RPD +++ S ISACA +G L++A+ ++ Y ++ + + I++ALIDM+AKCGS+E AR VF++ R+V+ W+ MI + +HG A A+ ++ M+ V PN VTF+G+L AC+H+G+V +G F M +H I P+ +HY C++DLLGRA L +A E+++ MP P V +WG+L+SAC+ H ELGE+ A+++ ++P + G V LSN+YA R W V ++R MKE+G++K+ G S +E+ + F V D++H + EI ++ + SRLK G+ N L DL +EE E + HSE++A+ YGLI+ + + +RI KNLR C +CH KL+SK+ REI+VRD RFHH++DGVCSC DYW Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694 HSP 2 Score: 124.405 bits (311), Expect = 4.255e-29 Identity = 71/239 (29.71%), Postives = 123/239 (51.46%), Query Frame = -2 Query: 673 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFE--KMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEH-NITPKHEHYGCMVDLLGRANLLREAVEIVETMPF------APNVVIWGSLMSACQIHG 1362 R +FD + + W+A+I GY+ ++ Q+AL ++ +Q+ + PD T ++ AC+ L L +++H + GF + + N LI +YAKC L AR VFE + R ++SWT +++A+A +G+ AL F +M++ V+P+ V V VL A + ++ GR I AS++ I P DLL N + V T +PN+++W +++S +G Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP---------DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302 HSP 3 Score: 120.168 bits (300), Expect = 9.244e-28 Identity = 65/232 (28.02%), Postives = 123/232 (53.02%), Query Frame = -2 Query: 673 RLIFD--QMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1362 R +F+ + E+ +VSW+A++S YA++ +P EAL +F +++ + ++PD V ++SV++A L L + + IH K G + +L MYAKCG + A+ +F+KM S N+I W MI+ +A +G A A+ F +M V P+ ++ + AC+ G +E R ++ + + ++D+ + + E +V +VV+W +++ +HG Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY-EYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHG 403 HSP 4 Score: 61.2326 bits (147), Expect = 1.003e-8 Identity = 41/164 (25.00%), Postives = 75/164 (45.73%), Query Frame = -2 Query: 619 LIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVI-WGSLMSACQIHGET--ELGEFTAKRVLELEPD 1101 LI + G + AR VF+ + + W +I ++ + +AL + M+ ARV P+ TF +L ACS ++ GR + A + G ++ L + L A + E +P ++ W +++SA +GE L F+ R ++++PD Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG-LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1) HSP 1 Score: 391.349 bits (1004), Expect = 1.884e-127 Identity = 187/421 (44.42%), Postives = 274/421 (65.08%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGS--LRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKM-KEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYS-RIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +F+ + KD+V+W+AM++G+A++ +PQEAL F ++ GIR D+VT+ ISACA LG A A K+G+ S + I +ALIDMY+KCG++E A NVF M ++NV +++ MI A HG A AL F M + ++PN VTFVG L ACSH+GLV+ GR++F SM + P +HY CMVDLLGR L+EA+E+++TM P+ +WG+L+ AC+IH E+ E A+ + ELEPD G +LLSN+YA W V +R+L+KE+G+ K S ++ N ++H+F + NH + +I +KL E+V RL + GY P+ V D+ + KR +++ H+EKLAL + L+ +DS I I+KNLR+C DCH F++L S+V + II+RD RFHH+R G CSC D+W Sbjct: 237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657 HSP 2 Score: 87.0409 bits (214), Expect = 6.884e-17 Identity = 66/254 (25.98%), Postives = 116/254 (45.67%), Query Frame = -2 Query: 664 WSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADK-NGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFA--------------------------IHGDANN-----ALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHY---GCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETE 1320 W+A+I GYA + EA+ ++ ++ I P T +++ AC + L+ + H + GF + + N +IDMY KC S++ AR VF++M R+VISWT +I A+A + G A N AL YF +M+++ + + VT G + AC+ G + + A I + + +H ++D+ + + EAV + +M NV + S++ HG + Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFC-FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADR--AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQ 366 HSP 3 Score: 58.5362 bits (140), Expect = 8.059e-8 Identity = 59/236 (25.00%), Postives = 98/236 (41.53%), Query Frame = -2 Query: 520 TMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSL--ERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDG-ALVLLSNIYAKERKWQNVGDLRQLMKERGI 1218 +++S + C NL ++ K IH + + G S I LI K G AR V E + RN WT +I +AI G + A+ + M++ + P TF +L AC + GR+ A + M+D+ + + A ++ + MP +V+ W L++A G E A + E P D A + +A+ K Q + M++ GI Sbjct: 51 SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG-NTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAYARVGNME----CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 3.662e-127 Identity = 184/419 (43.91%), Postives = 282/419 (67.30%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGV-LDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHY-RDGVCSCRDYW 1356 +F + +KD+V+WSAM++GYA++ + + A+++F EL GI+P++ T S+++ CA + + K H +A K+ SL +++AL+ MYAK G++E A VF++ ++++SW MI+ +A HG A AL F++MK+ +V+ +GVTF+GV AC+HAGLVE+G K F M+ + I P EH CMVDL RA L +A++++E MP IW ++++AC++H +TELG A++++ ++P+ A VLLSN+YA+ WQ +R+LM ER + KE GYS IE+ N+ + FL DR+H +IY KL ++ +RLK GY P+T VL D+++E K V+ HSE+LA+ +GLI K S + I+KNLRVC DCH +KL++K+ REI+VRD RFHH+ DGVCSC D+W Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868 HSP 2 Score: 113.62 bits (283), Expect = 1.510e-25 Identity = 61/225 (27.11%), Postives = 120/225 (53.33%), Query Frame = -2 Query: 688 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSA 1362 R +FD+M E+++V+W+ +ISGYA + E L LF +Q G +P+ T + + A GV + +H KNG ++ ++N+LI++Y KCG++ +AR +F+K ++V++W MI+ +A +G AL F M+ V + +F V+ C++ + ++ S++ + ++ MV + + +A+ + + + NVV W +++S Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV-AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371 HSP 3 Score: 102.064 bits (253), Expect = 1.120e-21 Identity = 56/221 (25.34%), Postives = 113/221 (51.13%), Query Frame = -2 Query: 670 DLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGE 1332 ++VSW+AMISG+ ++D +EA+ LF E++ G+RP++ T +++A L V+ ++ +H K + S + AL+D Y K G +E A VF + +++++W+ M+ +A G+ A++ F ++ + ++PN TF +L C+ K F + + ++ + + + A E+ + ++V W S++S HG+ Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQ 576 HSP 4 Score: 89.3521 bits (220), Expect = 1.622e-17 Identity = 61/242 (25.21%), Postives = 117/242 (48.35%), Query Frame = -2 Query: 637 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGET--ELGEFTAKRV 1356 +FD+ +D S+ +++ G++ + QEA RLF + LG+ D SV+ A L + +H K GF + + +L+D Y K + + R VF++M RNV++WT +I+ +A + + L F +M+ +PN TF L + G+ G ++ +++ ++ + +++L + +R+A I+ +VV W S++S +G LG F + R+ Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH-TVVVKNGLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 1.353e-126 Identity = 185/420 (44.05%), Postives = 279/420 (66.43%), Query Frame = -2 Query: 106 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVA-DRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1362 R +FD+M ++L +WS MI+GYA+++ ++A+ LF+ ++ G+ ++ M+SVIS+CA+LG L+ + + Y K+ +L + AL+DM+ +CG +E+A +VFE + + +SW+ +I A+HG A+ A+ YF +M P VTF VL ACSH GLVE G +I+ +M +H I P+ EHYGC+VD+LGRA L EA + M PN I G+L+ AC+I+ TE+ E +++++P+H G VLLSNIYA +W + LR +MKE+ + K G+S IE++ ++++F + D+ H + +I K E++ +++L GY NTG D++EEEK + HSEKLA+ YG++ + IRIVKNLRVCEDCHT KL+S+VY RE+IVRDR RFHH+R+GVCSCRDYW Sbjct: 203 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622 HSP 2 Score: 96.2857 bits (238), Expect = 6.469e-20 Identity = 61/259 (23.55%), Postives = 116/259 (44.79%), Query Frame = -2 Query: 673 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYA-------------------------------KCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1356 IF Q+ +L ++ +I ++ +P +A + ++ I PD +T +I A + + + + H + GF + + N+L+ MYA KCG +E AR +F++M RN+ +W+ MIN +A + A+ F+ MK V N V V+ +C+H G +E G + + ++ H +T +VD+ R + +A+ + E +P + + W S++ +HG Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAVHG 329
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.792e-126 Identity = 187/419 (44.63%), Postives = 274/419 (65.39%), Query Frame = -2 Query: 106 IFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKEL--QILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAKRVLELEPDHDGALVLLSNIYAKERKWQNVGDLRQLMKERGISKERGYSRIELNNEVHEFLVADRNHKQAYEIYEKLNEVVSRLKLDGYAPNTGCVLVDLEEEEKREVVLWHSEKLALCYGLINGAKDSCIRIVKNLRVCEDCHTFLKLVSKVYRREIIVRDRTRFHHYRDGVCSCRDYW 1356 +F M +++VSWSAMI+ YA++ + EALR F+E+ + P+ VTM+SV+ ACA+L L++ K IH Y + G L + +AL+ MY +CG LE + VF++M R+V+SW +I+++ +HG A++ F++M P VTFV VL ACSH GLVE+G+++F +M +H I P+ EHY CMVDLLGRAN L EA ++V+ M P +WGSL+ +C+IHG EL E ++R+ LEP + G VLL++IYA+ + W V +++L++ RG+ K G +E+ +++ F+ D + +I+ L ++ +K GY P T VL +LE EEK +VL HSEKLAL +GLIN +K IRI KNLR+CEDCH F K +SK +EI+VRD RFH +++GVCSC DYW Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657 HSP 2 Score: 115.161 bits (287), Expect = 4.089e-26 Identity = 74/238 (31.09%), Postives = 121/238 (50.84%), Query Frame = -2 Query: 673 RLIFDQMVEKDLVSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACA----NLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQK-MKEAR-VEPNGVTFVGVLYACSHAGLVEDGRKIFASMINE--HNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHG 1362 R +FD+ ++ + W+A+ + +E L L+ ++ +G+ D+ T V+ AC + L K K IH + + G+ + I L+DMYA+ G ++ A VF M RNV+SW+ MI +A +G A ALR F++ M+E + PN VT V VL AC+ +E G+ I ++ +I P +V + GR L + + M +VV W SL+S+ +HG Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPV---ISALVTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHG 365 HSP 3 Score: 64.6994 bits (156), Expect = 8.446e-10 Identity = 56/218 (25.69%), Postives = 91/218 (41.74%), Query Frame = -2 Query: 685 VSWSAMISGYAESDQPQEALRLFKELQILGIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEARVEPNGVTFVGVLYACSHAGLVED----GRKIFASMINEHNITPKHEHYGCMVDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSAC 1326 +S + +I + + ++A+R+ + P Q T +I C + L A +H + NG + LI MY+ GS++ AR VF+K R + W + A + G L + KM VE + T+ VL AC + + G++I A + + +VD+ R + A + MP NVV W S M AC Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL-TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSW-SAMIAC 257 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010582 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010582 ID=g.arboreum_cottongen_reftransV1_0010582; Name=g.arboreum_cottongen_reftransV1_0010582; organism=Gossypium arboreum; type=contig; length=1363bpback to top |