g.arboreum_cottongen_reftransV1_0008302, g.arboreum_cottongen_reftransV1_0008302 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A097P9R8_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI17 PE=2 SV=1) HSP 1 Score: 394.43 bits (1012), Expect = 1.805e-133 Identity = 195/236 (82.63%), Postives = 213/236 (90.25%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF+IRDL K SDAGV IL+G+N+ IPKG++VGIIGPSGSGKSTLLR++NRLWEPPS TVFLDG DI DLDVL LRRKVGMLFQ+P LF+GTVADNIR+G L G+KL D EV KLL LADLDSSF K G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKK + MT+VMVSHSIKQIQR+ADVVCLLVNGE+VE+LKP ELS+AKHPMAQRFLQLSS Sbjct: 48 KFRIRDLTKKSDAGVTILSGVNLDIPKGVVVGIIGPSGSGKSTLLRSMNRLWEPPSGTVFLDGHDIRDLDVLSLRRKVGMLFQIPALFEGTVADNIRFGPQLRGQKLPDHEVHKLLALADLDSSFHKKNGNELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKTQGMTIVMVSHSIKQIQRIADVVCLLVNGEVVEVLKPDELSQAKHPMAQRFLQLSS 283
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: D7SQD8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00540 PE=3 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 6.753e-133 Identity = 196/236 (83.05%), Postives = 215/236 (91.10%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF++R+L KVS++G IL GI+V +PKG IVG+IGPSGSGKSTLLR LNRLWEPPS TV+LDG DI +LDVLGLRRKVGMLFQLPVLF+GTVADNIRYG L GKKLTD EV KLLTLADLDSSF+ KTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKK R MTVVMVSHSIKQIQR+AD VCLLV+GEI+E+L+P +LSEA+HPMA RFLQLSS Sbjct: 33 KFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRVLNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLTDNEVLKLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKSRGMTVVMVSHSIKQIQRIADRVCLLVDGEIIEVLEPDKLSEARHPMALRFLQLSS 268
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A5BK97_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010974 PE=3 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 2.043e-132 Identity = 195/236 (82.63%), Postives = 214/236 (90.68%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF++R+L KVS++G IL GI+V +PKG IVG+IGPSGSGKSTLLR LNRLWEPPS TV+LDG DI +LDVLGLRRKVGMLFQLPVLF+GTVADNIRYG L GKKLTD EV KLLTLADLDSSF+ KTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKK R MT+VMVSHSIKQIQR+AD VCLLV+GEI E+L+P +LSEA+HPMA RFLQLSS Sbjct: 16 KFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRVLNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLTDNEVLKLLTLADLDSSFMKKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKSRGMTIVMVSHSIKQIQRIADRVCLLVDGEITEVLEPDKLSEARHPMALRFLQLSS 251
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: B9S7S7_RICCO (Phosphate abc transporter, putative OS=Ricinus communis GN=RCOM_1381510 PE=3 SV=1) HSP 1 Score: 390.193 bits (1001), Expect = 5.150e-132 Identity = 192/237 (81.01%), Postives = 212/237 (89.45%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF+IR+L + +D G ILNG+N+ +PKG+IVGI+GPSGSGKST LR+LNRLWEPP TVFLDG DI DLDVL LRRKVGMLFQ+PVLF+GT+ADNIRYG L GKKL+D EV KLL LADLDSSF K GELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIE+VIVKLKK + MT+VMVSHSIKQIQRVADVVCLLVNGE+VE+LKP+ELSEAKHPMAQRFLQLSS Sbjct: 40 YKFRIRNLTRETDGGAKILNGVNLDVPKGVIVGIVGPSGSGKSTFLRSLNRLWEPPPGTVFLDGCDIRDLDVLSLRRKVGMLFQIPVLFEGTIADNIRYGPQLRGKKLSDNEVHKLLILADLDSSFHKKNYGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEEVIVKLKKNQGMTIVMVSHSIKQIQRVADVVCLLVNGEVVEVLKPNELSEAKHPMAQRFLQLSS 276
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: K4BLT2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g117810.2 PE=3 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.474e-131 Identity = 188/237 (79.32%), Postives = 216/237 (91.14%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +K Q+R L KVS+ GV ILN ++V IPKG+I+G+IGPSGSGKST LR+LNRLWEP S++VFLDG DI DLDVL LRRK+GMLFQLPVLF+GTVADN+RYG L GKKL+D EV KLLTLADLDSSF +K+GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLK+++ MT+VMVSHSIKQI+R+AD+VCLLVNGEIVEILKP +L E+KHPMAQRFL+LSS Sbjct: 27 IKIQVRGLTKVSEKGVSILNNVSVDIPKGIIMGVIGPSGSGKSTFLRSLNRLWEPSSNSVFLDGHDICDLDVLALRRKIGMLFQLPVLFEGTVADNVRYGPQLKGKKLSDNEVYKLLTLADLDSSFFNKSGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKREQNMTIVMVSHSIKQIKRIADIVCLLVNGEIVEILKPDQLFESKHPMAQRFLELSS 263
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: M1B4E7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014219 PE=3 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 1.978e-131 Identity = 187/237 (78.90%), Postives = 216/237 (91.14%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +K Q+R L KVS+ GV ILN +NV IPKG+I+G+IGPSGSGKST LR+LNRLWEP S++VFLDG DI DLDVL LRRK+GMLFQ+PVLF+GTVADN+RYG L GKKL+D EV KLLTLADLDSSF +K+GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLK+++ MT+VMVSHSIKQI+R+A++VCLLVNGEIVEILKP +L E+KHPMAQRFL+LSS Sbjct: 27 IKIQVRGLTKVSEKGVSILNNVNVDIPKGVIMGVIGPSGSGKSTFLRSLNRLWEPSSNSVFLDGHDICDLDVLALRRKIGMLFQIPVLFEGTVADNVRYGPQLKGKKLSDNEVYKLLTLADLDSSFFNKSGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKREQNMTIVMVSHSIKQIKRIAEIVCLLVNGEIVEILKPDQLFESKHPMAQRFLELSS 263
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: S8CZF4_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_01919 PE=3 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 9.876e-131 Identity = 188/237 (79.32%), Postives = 215/237 (90.72%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 MK ++RDL K+SD V ILN +N+ IPKG+I+G+IGPSGSGKST LRALNRLWEPP +VFLDG DI LDVL LRR+VGMLFQLPVLF+GTVADN+RYG L GKKL+D EV KLLTLADLDS+F +K GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQN+EDV+VKLKK+R +TVV+VSHSIKQIQR+ADVVCL+V+GEIVEILKP++LSEAKHPMA+RFL+LSS Sbjct: 20 MKIEVRDLTKISDKDVMILNKLNLDIPKGVIMGVIGPSGSGKSTFLRALNRLWEPPPTSVFLDGVDICKLDVLNLRRRVGMLFQLPVLFEGTVADNVRYGPQLKGKKLSDEEVYKLLTLADLDSTFFAKAGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNVEDVLVKLKKERELTVVIVSHSIKQIQRIADVVCLVVSGEIVEILKPNQLSEAKHPMAKRFLELSS 256
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: M1CTN9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400028925 PE=3 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 4.001e-130 Identity = 191/236 (80.93%), Postives = 211/236 (89.41%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 K +IR L KVSD G IL + V IP+G+I+GIIGPSGSGKST+LRALNRLWEPP +TVFLDG DI DLDVL LRRKVGMLFQLPVLF+GTVADNIRYG L GKKL+D EV KLLTLADLDSSF K+GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKL+K + MT+V+VSHSIKQIQR+AD+VCLLV+GEIVEI+KP +LSEAKHPMA RFLQLSS Sbjct: 45 KIEIRGLNKVSDKGDSILKSVRVDIPRGVIMGIIGPSGSGKSTILRALNRLWEPPKNTVFLDGTDICDLDVLCLRRKVGMLFQLPVLFEGTVADNIRYGPKLKGKKLSDNEVYKLLTLADLDSSFFYKSGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLRKDQMMTIVIVSHSIKQIQRIADIVCLLVDGEIVEIIKPDQLSEAKHPMALRFLQLSS 280
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A059AHS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02855 PE=3 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 2.080e-129 Identity = 190/236 (80.51%), Postives = 209/236 (88.56%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF+++ L KVSDAG PIL IN+ IP+G IVGIIGPSGSGKSTLLRALNRLWEPPS TVFLDG DI +LDVL LRRKVGMLFQLP +F+GTVADN+RYG LMGKKLTD EV KLL LADLDSS S+ G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKK + +T +MVSHSIKQIQR+ADVVCLLV+GE+VE+L P LSEAKHPMAQRFLQLS+ Sbjct: 36 KFEVKGLNKVSDAGDPILREINLEIPQGKIVGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGEDIKNLDVLSLRRKVGMLFQLPAMFEGTVADNVRYGPQLMGKKLTDGEVFKLLNLADLDSSLFSRAGSELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKTQGLTTIMVSHSIKQIQRIADVVCLLVSGELVEVLTPDRLSEAKHPMAQRFLQLSN 271
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: D6RVY5_ARATH (Sensitive to aluminum rhizotoxicity 1 OS=Arabidopsis thaliana GN=AtSTAR1 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.037e-128 Identity = 184/236 (77.97%), Postives = 210/236 (88.98%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 K ++ DL +V+D G IL G+ + IPKGMIVG+IGPSGSGKST LR+LNRLWEPP TVFLDG DI ++DV+ LRR+VGMLFQLPVLFQGTVADN+RYG NL G+KL+D EV KLL+LADLD+SF KTG ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPIST+NIEDVIVKLKK+R +T V+VSHSIKQIQ+VAD+VCL+V+GEIVE+LKPSELS A HPMAQRFLQLSS Sbjct: 28 KIRVHDLTRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRFLQLSS 263
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: METN1_PSEPK (Methionine import ATP-binding protein MetN 1 OS=Pseudomonas putida (strain KT2440) GN=metN1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.594e-42 Identity = 90/239 (37.66%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 118 QIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLD---VLGLRRKVGMLFQ-LPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELS-EAKHPMAQRFLQ 810 Q+ +V+ +P LN ++ I G + G+IG SG+GKST+LR +NRL EP T+ +DG D+ + + G R++VGM+FQ +L TVADN+ L L G + D V++LL L S K +LS GQ QRV +AR L+ P++LL DE TSALDP +T ++ ++ ++ ++ ++T+V+++H + I+RV D V ++ G+IVE +E+ +HP +RF+Q Sbjct: 6 QVHKTYRVAGREIPALNPTSLTIEDGQVFGLIGHSGAGKSTMLRLINRLEEPSGGTIIVDGEDVTAFNASQLRGFRQQVGMIFQHFNLLASKTVADNVALPLALAGELSRSEIDKRVTELLARVGL-SDHAKKYPAQLSGGQKQRVGIARALSTNPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDRVAVMDAGQIVEQGSVAEVFLHPQHPTTKRFVQ 243
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: METN1_PSE14 (Methionine import ATP-binding protein MetN 1 OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=metN1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.631e-42 Identity = 93/233 (39.91%), Postives = 143/233 (61.37%), Query Frame = 1 Query: 136 KVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRR---KVGMLFQ-LPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELS-EAKHPMAQRFLQ 810 +V+ +P L+ ++ + G + GIIG SG+GKSTLLR +NRL P + +DG D+ LD GLRR +VGM+FQ +L TVADN+ L L G +K D V++LL L S K +LS GQ QRV +AR LA +P++LL DE TSALDP +T ++ ++ ++ ++ ++T+V+++H + I+RV D V ++ G IVE K +++ +HP +RF+Q Sbjct: 12 RVAGKEIPALHPTSLRVDGGQVFGIIGHSGAGKSTLLRLINRLETPSGGQIVVDGEDVTALDANGLRRFRQQVGMIFQHFNLLASKTVADNVAMPLTLAGDMSRKQIDQRVAELLKRVGL-SDHAKKYPAQLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGKVADVFLHPQHPTTRRFVQ 243
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB1_PHOPR (Phosphate import ATP-binding protein PstB 1 OS=Photobacterium profundum GN=pstB1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.860e-42 Identity = 95/206 (46.12%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 172 INVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDT-----VFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLL---TLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 IN+ I KG + IGPSG GKSTLLR +NR+ E + L G++I D +DV LRR+VGM+FQ P F ++ +N+ YGL L G +++ D V K L L D L + LS GQ QR+ +AR +A EPEVLLLDEPTSALDPIST IE++I LK K TV++V+H+++Q RV+D + GE+VE Sbjct: 44 INMRIAKGQVTSFIGPSGCGKSTLLRCINRMNELVDGCRVDGKIMLHGQNIYDSKVDVASLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGLKERRVLDDAVEKSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLTIEELINDLKTK--YTVIIVTHNMQQAARVSDQTAFMHMGELVE 247
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB1_VIBCH (Phosphate import ATP-binding protein PstB 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=pstB1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.997e-42 Identity = 95/209 (45.45%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDT-----VFLDGRDIV--DLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG----KKLTDVEVSKLLTLADLDS--SFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 L+ I++ IPKG + IGPSG GKSTLLR +NR+ + T V L G++I D+DV LRR+VGM+FQ P F ++ +N+ YGL L G + L D L A D L + LS GQ QR+ +AR +A EPEVLLLDEPTSALDPIST IE++I LK K TVV+V+H+++Q RV+D + G+++E Sbjct: 42 LSDISMRIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVEGTRVEGEVKLHGKNIYHPDVDVPTLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGIKNSRALDDAAEQSLRAAALWDEVKHRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLTIEELIHDLKTK--YTVVIVTHNMQQAARVSDHTAFIHMGKLIE 248
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_PSEHT (Phosphate import ATP-binding protein PstB OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pstB PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.195e-42 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG----KKLTDVEVSKLLTLADLDS--SFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 L+ +N+ IPKG + IGPSG GKSTLLR +NR+ + + L G++I D +DV LRR VGM+FQ P F ++ +N+ YGL L G +KL +V L A D L + LS GQ QR+ +AR++A PEVLLLDEPTSALDPIST IE++I LK K TVV+V+H+++Q RV+D + GE++E Sbjct: 44 LSKVNMNIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVDICRIEGEILLHGQNIYDKSVDVAALRRNVGMVFQRPNPFPKSIYENVVYGLRLQGIKDKRKLDEVVEQSLRGAALWDEVKDRLHDSAFGLSGGQQQRLVIARSIAISPEVLLLDEPTSALDPISTLVIEELINDLKSK--FTVVIVTHNMQQAARVSDQTAFMYMGELIE 250 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008302 ID=g.arboreum_cottongen_reftransV1_0008302; Name=g.arboreum_cottongen_reftransV1_0008302; organism=Gossypium arboreum; type=contig; length=1045bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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