g.arboreum_cottongen_reftransV1_0008302, g.arboreum_cottongen_reftransV1_0008302 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0B0MU02_GOSAR (ABC transporter I family member 17 OS=Gossypium arboreum GN=F383_24887 PE=3 SV=1) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 277/309 (89.64%), Postives = 278/309 (89.97%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS*FTFYNSCYISLFFLCA*DLMLIWFKQCSALQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY 1035 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQL+ LQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLT-------------------------------LQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY 300
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0D2TBT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G220300 PE=3 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 1.651e-160 Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 MKFQIRDLRKVSDAGVPILNGINVGIPKG IVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYG NL GKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKP+ELSEAKHPMAQRFLQLSS Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGKIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGPNLRGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPNELSEAKHPMAQRFLQLSS 259
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0D2RR36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G220300 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 2.536e-155 Identity = 229/237 (96.62%), Postives = 230/237 (97.05%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 MKFQIRDLRKVSDAGVPILNGINVGIPKG IVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQ DNIRYG NL GKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKP+ELSEAKHPMAQRFLQLSS Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGKIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQ----DNIRYGPNLRGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPNELSEAKHPMAQRFLQLSS 255
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A061FRX8_THECC (Non-intrinsic ABC protein 3 OS=Theobroma cacao GN=TCM_044780 PE=3 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 3.208e-149 Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+IR LRKVS+AGVPILNGI+V IPKGMIVGIIGPSGSGKST+LRALNRLWEP S+TVFLDG DIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYG L GKKL+D EVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKK+ MTVVMVSHSIKQIQRVADVVCLLVNGEIVE+LKP ELSEAKHPMAQRFLQLSS Sbjct: 25 VKFEIRGLRKVSEAGVPILNGISVDIPKGMIVGIIGPSGSGKSTMLRALNRLWEPQSNTVFLDGHDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGPRLRGKKLSDEEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKKGMTVVMVSHSIKQIQRVADVVCLLVNGEIVEVLKPGELSEAKHPMAQRFLQLSS 261
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: B9IN00_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s13190g PE=3 SV=2) HSP 1 Score: 407.912 bits (1047), Expect = 5.356e-139 Identity = 203/236 (86.02%), Postives = 216/236 (91.53%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF+IR+L KVSDAGVPILNGIN+ IPKGMIVGIIGPSGSGKST+LRALNRLWEPPS TVFLDG D+ DLDVLG RRKVGMLFQLP LF GTVADNIRYG L GKKLTD EV KLL+LADLDSSF KT ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKK+R +TVV+VSHSIKQIQR+ADVVCLLVNGEIVE+LKP +LSEAKHPMAQRFLQL S Sbjct: 37 KFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKSTVLRALNRLWEPPSGTVFLDGHDVKDLDVLGHRRKVGMLFQLPALFDGTVADNIRYGPQLKGKKLTDDEVYKLLSLADLDSSFYKKTSNELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKQRGLTVVIVSHSIKQIQRIADVVCLLVNGEIVEVLKPDDLSEAKHPMAQRFLQLGS 272
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: V4UUY2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009186mg PE=3 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.368e-136 Identity = 199/235 (84.68%), Postives = 215/235 (91.49%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLS 816 KF++R+LRK SD G PIL G+N+ IPKG+I+GIIGPSGSGKSTLLRALNRLWEPPS TVFLDGRDI DLDVL LRRKVGMLFQ+P LF+GTVADNIRYG L GKKLT+ EV KLL+LADLDSSFLSKTG E+SVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKKK MT+VMVSHSIKQIQR+ADVVCLLVNGEIVE+LKP LSEAKHPMA RFLQLS Sbjct: 35 KFRVRELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLLSLADLDSSFLSKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHPMALRFLQLS 269
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A067KI56_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09883 PE=3 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.435e-136 Identity = 201/237 (84.81%), Postives = 218/237 (91.98%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+I++L K SDAGV ILNGIN+ IPKG+IVGIIGPSGSGKSTLLR+LNRLWEPPS TVFLDGRDI DLDVLGLRR+VGMLFQ+P LF+GTVADNIRYG L GKKLTD EV KLL LADLDS+F K G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLK+ R MTVVMVSHSIKQIQRVADVVCL+VNGE+VE+LKP+ELSEAKHPMAQRFLQLS+ Sbjct: 36 IKFRIKNLIKKSDAGVTILNGINLDIPKGVIVGIIGPSGSGKSTLLRSLNRLWEPPSGTVFLDGRDIRDLDVLGLRRRVGMLFQVPALFEGTVADNIRYGPQLRGKKLTDHEVHKLLKLADLDSTFHKKNGSELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKENRGMTVVMVSHSIKQIQRVADVVCLVVNGEVVEVLKPNELSEAKHPMAQRFLQLSN 272
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A067F3L2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022337mg PE=3 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.664e-135 Identity = 198/235 (84.26%), Postives = 215/235 (91.49%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLS 816 KF++R+LRK SD G PIL G+N+ IPKG+I+GIIGPSGSGKSTLLRALNRLWEPPS TVFLDGRDI DLDVL LRRKVGMLFQ+P LF+GTV DNIRYG L GKKLT+ EV KLL+LADLDSSFL+KTGGE+SVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKKK MT+VMVSHSIKQIQR+ADVVCLLVNGEIVE+LKP LSEAKHPMA RFLQLS Sbjct: 63 KFRVRELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVVDNIRYGPQLRGKKLTENEVYKLLSLADLDSSFLNKTGGEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHPMALRFLQLS 297
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: W9S5Z6_9ROSA (ABC transporter I family member 17 OS=Morus notabilis GN=L484_009212 PE=3 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 7.943e-135 Identity = 197/237 (83.12%), Postives = 218/237 (91.98%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+IR+LRK S++G PILNG++V +PKG+IVGIIGPSGSGKSTLLRALNRLWEPP +V LDGRDI ++DVL LRRKVGMLFQLPVLF+GTVADNIRYG L GKKL+D EV KLLTLADLDSSF +K G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPIST+NIEDVIVKLKKK+ MT++MVSHSIKQIQRVADVVCLLVNGEIVE+LKP ELSEAKHPMA RFL+LSS Sbjct: 28 VKFRIRELRKWSESGDPILNGVSVDVPKGVIVGIIGPSGSGKSTLLRALNRLWEPPPGSVLLDGRDICEIDVLDLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLSDQEVHKLLTLADLDSSFYTKAGSELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKKQGMTILMVSHSIKQIQRVADVVCLLVNGEIVEVLKPDELSEAKHPMALRFLELSS 264
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A068TQR2_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora GN=GSCOC_T00022297001 PE=3 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 1.868e-134 Identity = 196/236 (83.05%), Postives = 214/236 (90.68%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 K QIR+L KVSD VPILN +NV IP+GMI+G+IGPSGSGKST LRALNRLWEPPS TVFLDG+DI DLDVL LRR+VGMLFQLP LF+GTVADNIRYG L GKKLTD EV KLLTLADLDS+F K+GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKK++ MT+VMVSHSIKQIQR+ADVVCLLV GEIVEILKP +LSEAKHPMA RFL+LS+ Sbjct: 69 KIQIRELSKVSDKSVPILNKVNVDIPRGMIMGVIGPSGSGKSTFLRALNRLWEPPSKTVFLDGQDIGDLDVLALRRRVGMLFQLPALFEGTVADNIRYGPQLKGKKLTDNEVYKLLTLADLDSTFFGKSGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKEKGMTIVMVSHSIKQIQRIADVVCLLVGGEIVEILKPDKLSEAKHPMALRFLELSN 304
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.202e-130 Identity = 184/236 (77.97%), Postives = 210/236 (88.98%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 K ++ DL +V+D G IL G+ + IPKGMIVG+IGPSGSGKST LR+LNRLWEPP TVFLDG DI ++DV+ LRR+VGMLFQLPVLFQGTVADN+RYG NL G+KL+D EV KLL+LADLD+SF KTG ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPIST+NIEDVIVKLKK+R +T V+VSHSIKQIQ+VAD+VCL+V+GEIVE+LKPSELS A HPMAQRFLQLSS Sbjct: 28 KIRVHDLTRVADDGSRILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKKTGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRGITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSELSHATHPMAQRFLQLSS 263
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: STAR1_ORYSJ (Protein STAR1 OS=Oryza sativa subsp. japonica GN=STAR1 PE=1 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 8.002e-116 Identity = 170/236 (72.03%), Postives = 198/236 (83.90%), Query Frame = 1 Query: 112 KFQIRDLRKVSDA-GVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLS 816 K ++R L + S+A G IL G+++ +P+G++VG+IGPSGSGKSTLLRALNRLWEP V LDG DI +DVL LRRKVGMLFQLP +F GTVADN+RYG L GKKLTD EV LL+LADLD + SK ELSVGQAQRVALARTLAN+PEVLLLDEPTSALDPISTQNIE+ IV+LKK R +T VMVSHS+KQIQR+AD+VCLLV GE+VE+L PSELSEAKHPMA+RFL+LS Sbjct: 111 KIRVRGLTRRSEARGEEILRGVDLDVPRGVVVGVIGPSGSGKSTLLRALNRLWEPAPGAVLLDGVDICGIDVLALRRKVGMLFQLPAMFDGTVADNVRYGPQLQGKKLTDAEVQSLLSLADLDPALCSKPASELSVGQAQRVALARTLANDPEVLLLDEPTSALDPISTQNIEEAIVRLKKTRGLTTVMVSHSVKQIQRIADLVCLLVAGEVVEVLPPSELSEAKHPMARRFLELS 346
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB1_CALS4 (Phosphate import ATP-binding protein PstB 1 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=pstB1 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.834e-52 Identity = 96/230 (41.74%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQ 798 M+ +++++ D G IL + K I ++GPSG+GKST+L+ +NRL EP +F++G + ++DV+ LRRK+GM+FQ P LF+GTV +NI G +L G+K +++ L L +L K LS G+AQRV++AR LAN PEVLLLDEPTS+LDP ST IE++I +L ++ M V++V+H+++Q +R+ D L GE++E K E E +P+++ Sbjct: 1 MEIELKNVNYFRD-GKYILKNVYFKFEKNGIYTVVGPSGAGKSTMLKLINRLIEPTEGAIFINGVEYKNIDVILLRRKIGMVFQRPFLFEGTVKENIELGPSLRGEK--NIDALFYLEAVGLSKDYLFKDVNNLSGGEAQRVSIARALANSPEVLLLDEPTSSLDPTSTSIIEELIKRLNREGIM-VILVTHNMEQAKRIGDYTLFLYKGELIEARKTWEFFE--NPVSE 224
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_METTH (Phosphate import ATP-binding protein PstB OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=pstB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.583e-47 Identity = 98/227 (43.17%), Postives = 136/227 (59.91%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSD-----TVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDV------EVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 + ++ DL D IL IN+ IPK + +IGPSG GKST +R LNR+ + S V+LDG+DI D +DV+ LR+KVGM+FQ P F ++ +N+ YGL + G D E + L D L K+ LS GQ QR+ +ART+A EPEV+L+DEP SALDPIST IED+I KLK T+++V+H+++Q RV+ ++GEIVE Sbjct: 5 YRIEVEDLNVYFDEA-HILKDINLKIPKNTVTALIGPSGCGKSTFIRTLNRMNDVISGFRHEGHVYLDGKDIYDPDMDVVELRKKVGMVFQKPNPFPKSIFENVAYGLRVHGYDDRDFIEERVEESLRAAALWDEVKDKLDKSALGLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTTKIEDLIHKLKND--YTIIIVTHNMQQATRVSKYTAFFLHGEIVE 228
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB2_CALS4 (Phosphate import ATP-binding protein PstB 2 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=pstB2 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 8.936e-47 Identity = 102/225 (45.33%), Postives = 141/225 (62.67%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIV-DLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSF---LSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 K ++RDL + V L IN+ + ++ +IGPSG GKST +R LNR+ + S TV LDG+DI ++DV+ LR+KVGM+FQ P F TV DN+ YG + G K+ + V K L A L L + LS GQ QR+ +ARTLA EPEV+L+DEPTSALDPIST IE++I +LKKK T+++V+H+++Q RV+D +NGE+VE Sbjct: 3 KIEVRDL-DLFYGEVQALKKINLDVEPNSVLALIGPSGCGKSTFIRTLNRMNDLIEGVKISGTVLLDGKDIYKEVDVIELRKKVGMVFQKPNPFPMTVYDNVAYGPRIHGIRDKRTLNEIVEKSLKAAALWDEVKDRLHHSALSLSGGQQQRLCIARTLAVEPEVILMDEPTSALDPISTMKIEELIEELKKK--YTIIIVTHNMQQAGRVSDYTAFFLNGELVE 224
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_METBU (Phosphate import ATP-binding protein PstB OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) GN=pstB PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.230e-44 Identity = 94/217 (43.32%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG--KKLTDVEVSKLLTLADLDSSFLSKTGGE---LSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSE 777 L I++ IP+ + +IGPSG GKST LR LNR+ + V +DG +I D +DV+ LR+ VGM+FQ P F ++ DNI YG + G K T+ V K L A L + G + LS GQ QR+ +ARTLA +PE+LL DEP SALDPIST IED+I++LKK T+V+V+H+++Q R++D ++GEI+E K + E Sbjct: 25 LKDISLDIPEKSVTALIGPSGCGKSTFLRCLNRMNDLVKSCSIEGEVLVDGENIYDKDVDVVDLRKNVGMVFQKPNPFPMSIYDNIAYGPKIHGCSKSETEERVHKALDDAALMGEVQDRLGDQAFSLSGGQQQRLCIARTLAVKPEILLFDEPCSALDPISTSKIEDLILELKKD--YTIVIVTHNMQQAARISDHTAFFLHGEIIEFGKTKHIFE 239
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_METST (Phosphate import ATP-binding protein PstB OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=pstB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.818e-44 Identity = 93/210 (44.29%), Postives = 129/210 (61.43%), Query Frame = 1 Query: 160 ILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTD-----VEVS-KLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 +L IN I K + +IGPSG GKST LR LNR+ + + LDG+DI D +DV+ LR+KVGM+FQ F ++ DN+ YGL + G+K D V+ S K L D L K+ LS GQ QR+ +ART+A PE++L+DEP SALDPIST +ED+I +LKK T+V+V+H+++Q RV+ +NGEI+E Sbjct: 20 VLKNINTDIEKNSVTALIGPSGCGKSTFLRTLNRMNDLIPIFRKEGQILLDGKDIYDNNVDVVELRKKVGMVFQKANPFPKSIYDNVAYGLRIHGEKDEDKIEKIVKKSLKAAALWDEVEDKLDKSALGLSGGQQQRLCIARTIAVSPEIILMDEPCSALDPISTIKVEDLINQLKKD--YTIVIVTHNMQQATRVSKYTSFFLNGEIIE 227
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_THET2 (Phosphate import ATP-binding protein PstB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pstB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 7.248e-44 Identity = 95/230 (41.30%), Postives = 144/230 (62.61%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE--PP---SDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVE------VSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSE--LSEAKHPMAQRFL 807 L I+V PK + IIGPSG GKSTLLR+LNR+ + P V +G +I D +D + +RR +GM+FQ P F T+ +N+ +GL LMG K +++E + + ++ F ++G LS GQ QR+ +AR +A EP +LL+DEPTSALDPI+TQ IED+I++LK+ R TVV+V+H+++Q RV+D + G +VE P+E ++ KHP + ++ Sbjct: 40 LYDISVRFPKNQVTAIIGPSGCGKSTLLRSLNRMNDLVPGVRVKGEVLYEGVNIYDPRVDPVAVRRHIGMVFQKPNPFPKTIFENVAFGLRLMGVKGSELEDRVVEALKRAALWEEVKDRFKKESGLRLSGGQQQRLCIARAIAVEPPLLLMDEPTSALDPIATQAIEDLILELKE--RYTVVIVTHNMQQAARVSDRTLFMHLGVLVE-EGPTEVIFTKPKHPYTEAYI 266
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_COLP3 (Phosphate import ATP-binding protein PstB OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=pstB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 9.700e-44 Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSF---LSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 LN I + IPKG + IGPSG GKSTLLR++NR+ + S + L G +I D +DV LRRKVGM+FQ P F T+ +N+ YGL +MG ++ D + L A L + L ++ LS GQ QR+ +AR +A +PEVLLLDEPTSALDPIST IE++I LKK+ TVV+V+H+++Q RV+D + G+++E Sbjct: 48 LNNITMSIPKGQVTAFIGPSGCGKSTLLRSINRMNDLVDNCHISGEINLHGSNIYDKHVDVAELRRKVGMVFQRPNPFPKTIYENVVYGLRIMGENNRRRLDEAAEQSLRSAALWNEVKDRLHESALGLSGGQQQRLVIARAIAIQPEVLLLDEPTSALDPISTLTIEELINDLKKQ--FTVVIVTHNMQQAARVSDQTAFMYMGDLIE 254
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_ARCFU (Phosphate import ATP-binding protein PstB OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pstB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.256e-43 Identity = 99/245 (40.41%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 115 FQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG----KKLTDV--EVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEA-KHPMAQRFL 807 F IR+ V I N +N+ I + + IIGPSG GKSTLLR+LNRL E V DG++I D +D + LRR++GM+FQ P F ++ DN+ YG + G ++L ++ E K L D LS + LS GQ QR+ +AR +A PEV+L DEPTSALDPI+ IE+++V+LKK TVV+V+H+I+Q R++D V GE+VE K +++ E + + +++L Sbjct: 5 FDIRNFSVYYGNKVGIRN-VNLEIYRNKVTAIIGPSGCGKSTLLRSLNRLIELVDGVRIEGEVIFDGKNIYDDGVDAVELRRRIGMVFQHPNPFPKSIFDNVAYGPRVHGIKDKERLKEIVEESLKKAALWDEVKDRLSDSALGLSGGQQQRLCIARAIATNPEVILFDEPTSALDPIAAAKIEELMVELKKN--YTVVVVTHNIQQAARISDYVAFFWMGELVEYGKTAKVFEKPEKELTEKYL 246 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008302 ID=g.arboreum_cottongen_reftransV1_0008302; Name=g.arboreum_cottongen_reftransV1_0008302; organism=Gossypium arboreum; type=contig; length=1045bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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