g.arboreum_cottongen_reftransV1_0008302, g.arboreum_cottongen_reftransV1_0008302 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0B0MU02_GOSAR (ABC transporter I family member 17 OS=Gossypium arboreum GN=F383_24887 PE=3 SV=1) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 277/309 (89.64%), Postives = 278/309 (89.97%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS*FTFYNSCYISLFFLCA*DLMLIWFKQCSALQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY 1035 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQL+ LQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLT-------------------------------LQVYLLYLDDHLELGMSTHRADSSLGKVFFVFLISSQPNLNY 300
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0D2TBT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G220300 PE=3 SV=1) HSP 1 Score: 462.225 bits (1188), Expect = 1.651e-160 Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 MKFQIRDLRKVSDAGVPILNGINVGIPKG IVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYG NL GKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKP+ELSEAKHPMAQRFLQLSS Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGKIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGPNLRGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPNELSEAKHPMAQRFLQLSS 259
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A0D2RR36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G220300 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 2.536e-155 Identity = 229/237 (96.62%), Postives = 230/237 (97.05%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 MKFQIRDLRKVSDAGVPILNGINVGIPKG IVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQ DNIRYG NL GKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKP+ELSEAKHPMAQRFLQLSS Sbjct: 23 MKFQIRDLRKVSDAGVPILNGINVGIPKGKIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQ----DNIRYGPNLRGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPNELSEAKHPMAQRFLQLSS 255
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A061FRX8_THECC (Non-intrinsic ABC protein 3 OS=Theobroma cacao GN=TCM_044780 PE=3 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 3.208e-149 Identity = 218/237 (91.98%), Postives = 227/237 (95.78%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+IR LRKVS+AGVPILNGI+V IPKGMIVGIIGPSGSGKST+LRALNRLWEP S+TVFLDG DIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYG L GKKL+D EVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKK+ MTVVMVSHSIKQIQRVADVVCLLVNGEIVE+LKP ELSEAKHPMAQRFLQLSS Sbjct: 25 VKFEIRGLRKVSEAGVPILNGISVDIPKGMIVGIIGPSGSGKSTMLRALNRLWEPQSNTVFLDGHDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGPRLRGKKLSDEEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKKGMTVVMVSHSIKQIQRVADVVCLLVNGEIVEVLKPGELSEAKHPMAQRFLQLSS 261
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: B9IN00_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s13190g PE=3 SV=2) HSP 1 Score: 407.912 bits (1047), Expect = 5.356e-139 Identity = 203/236 (86.02%), Postives = 216/236 (91.53%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 KF+IR+L KVSDAGVPILNGIN+ IPKGMIVGIIGPSGSGKST+LRALNRLWEPPS TVFLDG D+ DLDVLG RRKVGMLFQLP LF GTVADNIRYG L GKKLTD EV KLL+LADLDSSF KT ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKK+R +TVV+VSHSIKQIQR+ADVVCLLVNGEIVE+LKP +LSEAKHPMAQRFLQL S Sbjct: 37 KFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKSTVLRALNRLWEPPSGTVFLDGHDVKDLDVLGHRRKVGMLFQLPALFDGTVADNIRYGPQLKGKKLTDDEVYKLLSLADLDSSFYKKTSNELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKQRGLTVVIVSHSIKQIQRIADVVCLLVNGEIVEVLKPDDLSEAKHPMAQRFLQLGS 272
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: V4UUY2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009186mg PE=3 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.368e-136 Identity = 199/235 (84.68%), Postives = 215/235 (91.49%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLS 816 KF++R+LRK SD G PIL G+N+ IPKG+I+GIIGPSGSGKSTLLRALNRLWEPPS TVFLDGRDI DLDVL LRRKVGMLFQ+P LF+GTVADNIRYG L GKKLT+ EV KLL+LADLDSSFLSKTG E+SVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKKK MT+VMVSHSIKQIQR+ADVVCLLVNGEIVE+LKP LSEAKHPMA RFLQLS Sbjct: 35 KFRVRELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEVYKLLSLADLDSSFLSKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHPMALRFLQLS 269
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A067KI56_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09883 PE=3 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.435e-136 Identity = 201/237 (84.81%), Postives = 218/237 (91.98%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+I++L K SDAGV ILNGIN+ IPKG+IVGIIGPSGSGKSTLLR+LNRLWEPPS TVFLDGRDI DLDVLGLRR+VGMLFQ+P LF+GTVADNIRYG L GKKLTD EV KLL LADLDS+F K G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLK+ R MTVVMVSHSIKQIQRVADVVCL+VNGE+VE+LKP+ELSEAKHPMAQRFLQLS+ Sbjct: 36 IKFRIKNLIKKSDAGVTILNGINLDIPKGVIVGIIGPSGSGKSTLLRSLNRLWEPPSGTVFLDGRDIRDLDVLGLRRRVGMLFQVPALFEGTVADNIRYGPQLRGKKLTDHEVHKLLKLADLDSTFHKKNGSELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKENRGMTVVMVSHSIKQIQRVADVVCLVVNGEVVEVLKPNELSEAKHPMAQRFLQLSN 272
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A067F3L2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022337mg PE=3 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.664e-135 Identity = 198/235 (84.26%), Postives = 215/235 (91.49%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLS 816 KF++R+LRK SD G PIL G+N+ IPKG+I+GIIGPSGSGKSTLLRALNRLWEPPS TVFLDGRDI DLDVL LRRKVGMLFQ+P LF+GTV DNIRYG L GKKLT+ EV KLL+LADLDSSFL+KTGGE+SVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKKK MT+VMVSHSIKQIQR+ADVVCLLVNGEIVE+LKP LSEAKHPMA RFLQLS Sbjct: 63 KFRVRELRKESDDGAPILKGVNMEIPKGVIMGIIGPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLRRKVGMLFQIPALFEGTVVDNIRYGPQLRGKKLTENEVYKLLSLADLDSSFLNKTGGEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHPMALRFLQLS 297
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: W9S5Z6_9ROSA (ABC transporter I family member 17 OS=Morus notabilis GN=L484_009212 PE=3 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 7.943e-135 Identity = 197/237 (83.12%), Postives = 218/237 (91.98%), Query Frame = 1 Query: 109 MKFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 +KF+IR+LRK S++G PILNG++V +PKG+IVGIIGPSGSGKSTLLRALNRLWEPP +V LDGRDI ++DVL LRRKVGMLFQLPVLF+GTVADNIRYG L GKKL+D EV KLLTLADLDSSF +K G ELSVGQAQRVALARTLANEPEVLLLDEPTSALDPIST+NIEDVIVKLKKK+ MT++MVSHSIKQIQRVADVVCLLVNGEIVE+LKP ELSEAKHPMA RFL+LSS Sbjct: 28 VKFRIRELRKWSESGDPILNGVSVDVPKGVIVGIIGPSGSGKSTLLRALNRLWEPPPGSVLLDGRDICEIDVLDLRRKVGMLFQLPVLFEGTVADNIRYGPQLRGKKLSDQEVHKLLTLADLDSSFYTKAGSELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKKQGMTILMVSHSIKQIQRVADVVCLLVNGEIVEVLKPDELSEAKHPMALRFLELSS 264
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Match: A0A068TQR2_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora GN=GSCOC_T00022297001 PE=3 SV=1) HSP 1 Score: 397.512 bits (1020), Expect = 1.868e-134 Identity = 196/236 (83.05%), Postives = 214/236 (90.68%), Query Frame = 1 Query: 112 KFQIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMGKKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELSEAKHPMAQRFLQLSS 819 K QIR+L KVSD VPILN +NV IP+GMI+G+IGPSGSGKST LRALNRLWEPPS TVFLDG+DI DLDVL LRR+VGMLFQLP LF+GTVADNIRYG L GKKLTD EV KLLTLADLDS+F K+GGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDV+VKLKK++ MT+VMVSHSIKQIQR+ADVVCLLV GEIVEILKP +LSEAKHPMA RFL+LS+ Sbjct: 69 KIQIRELSKVSDKSVPILNKVNVDIPRGMIMGVIGPSGSGKSTFLRALNRLWEPPSKTVFLDGQDIGDLDVLALRRRVGMLFQLPALFEGTVADNIRYGPQLKGKKLTDNEVYKLLTLADLDSTFFGKSGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKEKGMTIVMVSHSIKQIQRIADVVCLLVGGEIVEILKPDKLSEAKHPMALRFLELSN 304
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: METN1_PSEPK (Methionine import ATP-binding protein MetN 1 OS=Pseudomonas putida (strain KT2440) GN=metN1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.594e-42 Identity = 90/239 (37.66%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 118 QIRDLRKVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLD---VLGLRRKVGMLFQ-LPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELS-EAKHPMAQRFLQ 810 Q+ +V+ +P LN ++ I G + G+IG SG+GKST+LR +NRL EP T+ +DG D+ + + G R++VGM+FQ +L TVADN+ L L G + D V++LL L S K +LS GQ QRV +AR L+ P++LL DE TSALDP +T ++ ++ ++ ++ ++T+V+++H + I+RV D V ++ G+IVE +E+ +HP +RF+Q Sbjct: 6 QVHKTYRVAGREIPALNPTSLTIEDGQVFGLIGHSGAGKSTMLRLINRLEEPSGGTIIVDGEDVTAFNASQLRGFRQQVGMIFQHFNLLASKTVADNVALPLALAGELSRSEIDKRVTELLARVGL-SDHAKKYPAQLSGGQKQRVGIARALSTNPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDRVAVMDAGQIVEQGSVAEVFLHPQHPTTKRFVQ 243
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: METN1_PSE14 (Methionine import ATP-binding protein MetN 1 OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=metN1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.631e-42 Identity = 93/233 (39.91%), Postives = 143/233 (61.37%), Query Frame = 1 Query: 136 KVSDAGVPILNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDTVFLDGRDIVDLDVLGLRR---KVGMLFQ-LPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLLTLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVEILKPSELS-EAKHPMAQRFLQ 810 +V+ +P L+ ++ + G + GIIG SG+GKSTLLR +NRL P + +DG D+ LD GLRR +VGM+FQ +L TVADN+ L L G +K D V++LL L S K +LS GQ QRV +AR LA +P++LL DE TSALDP +T ++ ++ ++ ++ ++T+V+++H + I+RV D V ++ G IVE K +++ +HP +RF+Q Sbjct: 12 RVAGKEIPALHPTSLRVDGGQVFGIIGHSGAGKSTLLRLINRLETPSGGQIVVDGEDVTALDANGLRRFRQQVGMIFQHFNLLASKTVADNVAMPLTLAGDMSRKQIDQRVAELLKRVGL-SDHAKKYPAQLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGKVADVFLHPQHPTTRRFVQ 243
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB1_PHOPR (Phosphate import ATP-binding protein PstB 1 OS=Photobacterium profundum GN=pstB1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.860e-42 Identity = 95/206 (46.12%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 172 INVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDT-----VFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG---KKLTDVEVSKLL---TLADLDSSFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 IN+ I KG + IGPSG GKSTLLR +NR+ E + L G++I D +DV LRR+VGM+FQ P F ++ +N+ YGL L G +++ D V K L L D L + LS GQ QR+ +AR +A EPEVLLLDEPTSALDPIST IE++I LK K TV++V+H+++Q RV+D + GE+VE Sbjct: 44 INMRIAKGQVTSFIGPSGCGKSTLLRCINRMNELVDGCRVDGKIMLHGQNIYDSKVDVASLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGLKERRVLDDAVEKSLRGAALWDEVKDRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLTIEELINDLKTK--YTVIIVTHNMQQAARVSDQTAFMHMGELVE 247
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB1_VIBCH (Phosphate import ATP-binding protein PstB 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=pstB1 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 3.997e-42 Identity = 95/209 (45.45%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWEPPSDT-----VFLDGRDIV--DLDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG----KKLTDVEVSKLLTLADLDS--SFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 L+ I++ IPKG + IGPSG GKSTLLR +NR+ + T V L G++I D+DV LRR+VGM+FQ P F ++ +N+ YGL L G + L D L A D L + LS GQ QR+ +AR +A EPEVLLLDEPTSALDPIST IE++I LK K TVV+V+H+++Q RV+D + G+++E Sbjct: 42 LSDISMRIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVEGTRVEGEVKLHGKNIYHPDVDVPTLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGIKNSRALDDAAEQSLRAAALWDEVKHRLHENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLTIEELIHDLKTK--YTVVIVTHNMQQAARVSDHTAFIHMGKLIE 248
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Match: PSTB_PSEHT (Phosphate import ATP-binding protein PstB OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pstB PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.195e-42 Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 1 Query: 163 LNGINVGIPKGMIVGIIGPSGSGKSTLLRALNRLWE-----PPSDTVFLDGRDIVD--LDVLGLRRKVGMLFQLPVLFQGTVADNIRYGLNLMG----KKLTDVEVSKLLTLADLDS--SFLSKTGGELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVIVKLKKKRRMTVVMVSHSIKQIQRVADVVCLLVNGEIVE 750 L+ +N+ IPKG + IGPSG GKSTLLR +NR+ + + L G++I D +DV LRR VGM+FQ P F ++ +N+ YGL L G +KL +V L A D L + LS GQ QR+ +AR++A PEVLLLDEPTSALDPIST IE++I LK K TVV+V+H+++Q RV+D + GE++E Sbjct: 44 LSKVNMNIPKGQVTAFIGPSGCGKSTLLRCINRMNDLVDICRIEGEILLHGQNIYDKSVDVAALRRNVGMVFQRPNPFPKSIYENVVYGLRLQGIKDKRKLDEVVEQSLRGAALWDEVKDRLHDSAFGLSGGQQQRLVIARSIAISPEVLLLDEPTSALDPISTLVIEELINDLKSK--FTVVIVTHNMQQAARVSDQTAFMYMGELIE 250 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008302 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008302 ID=g.arboreum_cottongen_reftransV1_0008302; Name=g.arboreum_cottongen_reftransV1_0008302; organism=Gossypium arboreum; type=contig; length=1045bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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