g.arboreum_cottongen_reftransV1_0006676, g.arboreum_cottongen_reftransV1_0006676 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A067DYW2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012975mg PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.009e-26 Identity = 88/147 (59.86%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582 MAAFSP GIQ+G E+ H MD K+L+ALI+A S+L II +L CLW+Y+ K S KSS AKS D E G L+ +LGK S+R VSK+G A SF++YK+LEKAT+ FH NILGEGGFGCVYKA+ +D + AVKKLDCA+QDA Sbjct: 45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVSKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: D7SUZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06050 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.425e-26 Identity = 78/146 (53.42%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 MAAFSPA IQ G EE++K D KK +AL +A ++LG I L LWI+ +K S KS K+ A+SSD EK L P L K +M+ + ++G S +DYK+LE ATN F NILGEGGFGCVYKA+ +D S+ AVKK+D QDAE+ Sbjct: 52 MAAFSPA-IQEGSEENQK-DSHKKTFIALTVASAALGVTILILLSLWIH-KKCSQKSHKSNAQSSDAEKALTLGPLLAKFNTMKVIGRKGSVSCIDYKVLETATNNFQESNILGEGGFGCVYKARLDDNSHVAVKKIDGRGQDAER 194
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: V4TSN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008263mg PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.094e-25 Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEE--HKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYA-SFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582 MAAFSP GIQ+G E+ H MD K+L+ALI+A S+L II +L CLW+Y+ K S KSS AKS D E G L+ +LGK S+R V K+G A SF++YK+LEKAT+ FH NILGEGGFGCVYKA+ +D + AVKKLDCA+QDA Sbjct: 45 MAAFSP-GIQMGSEDPHHHHMDAHHKLLIALIIACSALCLIILALLCLWLYHLKYSFKSSNKNAKSKDSENGVVLSSFLGKFTSVRMVHKKGSAISFIEYKLLEKATDSFHESNILGEGGFGCVYKAKLDDNLHVAVKKLDCATQDA 190
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A059CPM6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01681 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.585e-25 Identity = 73/145 (50.34%), Postives = 100/145 (68.97%), Query Frame = 1 Query: 154 AAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 AAFSP GG H+ +D +K+L+ALI + S +GAII LW+Y K + KS+K + S+ E+G LAP+LGK S++TVS++ +F +YK+LEKA+N F N+LGEGGFG VYKA+ +D + AVKKLDCASQDA + Sbjct: 59 AAFSP---DTGGRRHR-LDSHEKLLVALIASCSLVGAIILIFMGLWLYQNKFTKKSTKKSSLRSEAERGLALAPFLGKFSSLKTVSRKNSIAFFEYKLLEKASNSFSDSNVLGEGGFGRVYKARLDDDKHVAVKKLDCASQDAVR 199
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: I1M9F9_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.953e-24 Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 M+A SP GI +G E+ + MD KKM++A+ +A +SLGA+I + C+WIYY K SKS + SD EKG +P+L K S++ V K+G +DYK +EK T F NILGEGGFGCVYKA +D AVKKL C +Q AE+ Sbjct: 45 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKTTGNFEEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 188
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B2P9A0_GLYSO (Putative receptor-like protein kinase OS=Glycine soja GN=glysoja_037631 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.953e-24 Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 M+A SP GI +G E+ + MD KKM++A+ +A +SLGA+I + C+WIYY K SKS + SD EKG +P+L K S++ V K+G +DYK +EK T F NILGEGGFGCVYKA +D AVKKL C +Q AE+ Sbjct: 45 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKTTGNFEEINILGEGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 188
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: C6TAW1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.194e-24 Identity = 72/146 (49.32%), Postives = 95/146 (65.07%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 M+A SP GI +G E+ + MD KKM++A+ + +SLGA+I L C+WIYY K SKS + SD EKG +P+L K S++ V K+G +DYK +EKAT F NILG+GGFGCVYKA +D AVKKL C +Q AE+ Sbjct: 46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVVSTSLGAVILCLLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A068VGI3_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_288 OS=Coffea canephora GN=GSCOC_T00005568001 PE=4 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.381e-24 Identity = 69/145 (47.59%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 151 MAAFSP-AGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDA 582 MA SP G+Q G E+H +MD +K+++ALI A ++LGAI+ + WIY++K++SKS + SSDG +G +L K S++ ++ + + MDYK LE ATN F +ILGEGGFGCVYKAQ D +AAVK+LD +QDA Sbjct: 57 MAHSSPGPGVQAGTEKHHQMDSNRKLVIALIAASTALGAILFLMLFFWIYHKKHTSKSQTDSLHSSDGLEGLAFGSFLAKYNSLKASCRKRFVAVMDYKALETATNNFCQSDILGEGGFGCVYKAQLEDNQFAAVKRLDGGTQDA 201
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: I1MWX5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.746e-24 Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 M+A SP GI +G E+ + MD KKM++A+ +A +SLGA+I + C+WIYY K SKS + SD EKG +P+L K S++ V K+G +DYK +EKAT F NILG+GGFGCVYKA +D AVKKL C +Q AE+ Sbjct: 46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Match: A0A0B2QS56_GLYSO (Putative receptor-like protein kinase OS=Glycine soja GN=glysoja_036221 PE=4 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.746e-24 Identity = 72/146 (49.32%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 151 MAAFSPAGIQLGGEEHKKMDPTKKMXXXXXXXXXXXXXXXXXXFCLWIYYRXXXXXXXXXXXXXXDGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 M+A SP GI +G E+ + MD KKM++A+ +A +SLGA+I + C+WIYY K SKS + SD EKG +P+L K S++ V K+G +DYK +EKAT F NILG+GGFGCVYKA +D AVKKL C +Q AE+ Sbjct: 46 MSASSP-GIVMGAEQ-QHMDSHKKMVIAVAVASTSLGAVILCVLCIWIYYTKYPSKSKGKNVQRSDAEKGLASSPFLSKFSSIKLVGKKGCVPIIDYKQIEKATGNFKEINILGKGGFGCVYKAHLDDNLDVAVKKLHCENQYAEQ 189
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y1864_ARATH (Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana GN=At1g80640 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.039e-8 Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 1 Query: 346 DGEKGNGLAPYLGKLKSMRTVSKEGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLD 564 D K P + K+ S+R +G +Y++LE ATNKF N+L GG GC+Y+A ++ S VKKLD Sbjct: 112 DSVKSVTTKPTVHKIDSVR----KGTIPVYEYQLLESATNKFSDSNVLSRGGRGCLYRACLDEKSSVTVKKLD 180
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y1497_ARATH (Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.085e-8 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1 Query: 439 YKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 YK + ATN F+ ++G+GGFG VYKA+FNDG AAVKK++ S+ AE+ Sbjct: 319 YKEMTNATNDFN--TVIGQGGFGTVYKAEFNDGLIAAVKKMNKVSEQAEQ 366
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: PERK3_ARATH (Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 3.839e-8 Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = 1 Query: 421 YASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 + S Y L +ATNKF N+LGEGGFG VYK N+G+ AVK+L S EK Sbjct: 167 HQSTFTYGELARATNKFSEANLLGEGGFGFVYKGILNNGNEVAVKQLKVGSAQGEK 222
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 4.197e-8 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 448 LEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL--DCASQDAE 585 L K+TN F NI+G GGFG VYKA F DGS AAVK+L DC + E Sbjct: 747 LLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMERE 794
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: TMK4_ARATH (Receptor-like kinase TMK4 OS=Arabidopsis thaliana GN=TMK4 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 6.299e-8 Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 1 Query: 415 EGYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS 573 EG + + ++L + TN F NILG GGFG VY + +DG+ AVK+++CA+ Sbjct: 560 EGGSVTIPMEVLRQVTNNFSEDNILGRGGFGVVYAGELHDGTKTAVKRMECAA 612
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 8.268e-8 Identity = 24/42 (57.14%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 436 DYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL 561 D+K +E ATNKF N LGEGGFG VYK + ++G+ AVK+L Sbjct: 339 DFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRL 380
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2) HSP 1 Score: 54.6842 bits (130), Expect = 9.854e-8 Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 1 Query: 433 MDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS 573 +DY+++ ATNKF N +G+GGFG VYK F++G+ AVK+L +S Sbjct: 325 LDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSS 371
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: Y4345_ARATH (Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana GN=At4g34500 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.413e-7 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 418 GYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCASQDAEK 588 G+ + K LE AT F N++GEGG+G VY+A F+DGS AAVK L AEK Sbjct: 128 GWGKWYSLKDLEIATRGFSDDNMIGEGGYGVVYRADFSDGSVAAVKNLLNNKGQAEK 184
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.537e-7 Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 418 GYASFMDYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKL-DC 567 G+ +K L ATN F+ NILG GG+G VYK NDG+ AVK+L DC Sbjct: 284 GHLKRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRLKDC 334
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 1.720e-7 Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 1 Query: 436 DYKILEKATNKFHHGNILGEGGFGCVYKAQFNDGSYAAVKKLDCAS-QDAEK 588 ++K +E ATNKF N LGEG FG VYK +F++G+ AVK+L S QD +K Sbjct: 342 EFKTIEAATNKFSKSNKLGEGRFGEVYKGKFSNGTEVAVKRLSKVSGQDTKK 393 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006676 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 22
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006676 ID=g.arboreum_cottongen_reftransV1_0006676; Name=g.arboreum_cottongen_reftransV1_0006676; organism=Gossypium arboreum; type=contig; length=589bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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