g.arboreum_cottongen_reftransV1_0011016, g.arboreum_cottongen_reftransV1_0011016 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Match: W9S228_9ROSA (ABC transporter G family member 26 OS=Morus notabilis GN=L484_014860 PE=4 SV=1) HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0 Identity = 461/636 (72.48%), Postives = 543/636 (85.38%), Query Frame = 3 Query: 129 WQDMFRSASVRKPSPAPGNSDXXXXXXXXXXXXX---XSTDPDHKNSLSGDPQVRLALYIAMAHAGLAFTIFILYAICKLLQEYFRPIQWAILCSIPLRGIQETLVGFWSEPLRLGLTETVLAVPVAVFKAFIGTLVDIKDVCLRVFLKRPKSNLSRRKRSGFPMLVRWLVAFAVFVIAYERXXXXXXXXXXXXXXXXSTKNIDDXXXXXXXXXXXXXXXXXXXAYFTTRILKRLDTIVAIGLIIGMFVGFFAGATFFSYKIGVEGKDAVVSVKSHVEESNYAERMGVKRWMEENDVPGMVDKYTTQFYETVSEQIDNLAMQYNMTEFVTGIKHFVIXXXXXXXXXXXALMTPSPYTEKFLSLRKRVSNREWGQIYTEVDAIFRELIITREDLVQKAKGFAVKGADVSQRVLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITSESGGVTEQVMSMIPISKPARIRCVEVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVLESRYIVAVVFSISHIVLMDYGAAEIQESIPGYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKKKD 2027 WQDMFRSAS+RKPSP+P + P + + DPD K++LSGDPQVRLAL IAMAHAGLAF IF L+A+CKLL+EY RPIQWA+LCSIPLRGIQ+TLV FWSEPL LGLTETVLAVPVAVF+ F+GTLV++++VC+R+ L++PKS RR S F L+RWLV+F +F+ AYE G GS+ ++ LGFV S +D ++S VSS RS SF RSR+SA+FT +LK+L TIVAIGLIIGM +G G FFSYKIGVEGKDAV+S+KSHVEESNYAE++GV++WM+END+PGMVDKY+TQ YETVSEQID+LAMQYNM+EFVTGIKHFVI +SS STAL+TPSPYTEK +SLR R+SNREWG+IYTEVD I RELII+REDLV+KAK +AVKG DVSQRVLASS ++LGGGAK +F+IGNSI+ GAAEVFNF+SQ MVFFWVLYYLITSESGGVTEQVMSM+PISK AR+RCVEVLD+AISGVLL+TAEIAF QGCLTWL+FRL++IHF+YM TV+A S L PIFP WFA+IPAA++LVLE RYIVA+V SI H+VLMDYGA+EIQE IPG+SAYLTGLSIIGGMTLFPSA+EGAIMGPLITTVVIALKDLY EFVL+ PK+K+ Sbjct: 691 WQDMFRSASIRKPSPSPSPTPPTHAPPTGAREADSPPTAADPDQKSALSGDPQVRLALCIAMAHAGLAFAIFTLFAVCKLLEEYLRPIQWAVLCSIPLRGIQQTLVAFWSEPLGLGLTETVLAVPVAVFRVFVGTLVEVREVCVRIVLRKPKSGTPRRHISAFSKLIRWLVSFWIFIFAYESFGRFGSIALVGLGFVFSATTVDSTMSTVSSLRSISFPRSRISAFFTRGLLKKLKTIVAIGLIIGMILGLIIGVIFFSYKIGVEGKDAVISLKSHVEESNYAEKIGVRQWMDENDLPGMVDKYSTQLYETVSEQIDSLAMQYNMSEFVTGIKHFVIKQQGNSSAPSTALITPSPYTEKLVSLRNRISNREWGEIYTEVDVIVRELIISREDLVEKAKAYAVKGVDVSQRVLASSTTILGGGAKFVFSIGNSIISGAAEVFNFLSQSMVFFWVLYYLITSESGGVTEQVMSMVPISKSARVRCVEVLDQAISGVLLSTAEIAFVQGCLTWLLFRLYKIHFLYMCTVIAIASSLFPIFPSWFASIPAALQLVLEGRYIVAIVLSIIHLVLMDYGASEIQEDIPGHSAYLTGLSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYAEFVLDGPKEKE 1326
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Match: R0GPI5_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026059mg PE=4 SV=1) HSP 1 Score: 863.603 bits (2230), Expect = 0.000e+0 Identity = 463/633 (73.14%), Postives = 529/633 (83.57%), Query Frame = 3 Query: 129 WQDMFRSASVRKPSPAPGNSDXXXXXXXXXXXXXXSTDPDHKNSLSG-DPQVRLALYIAMAHAGLAFTIFILYAICKLLQEYFRPIQWAILCSIPLRGIQETLVGFWSEPLRLGLTETVLAVPVAVFKAFIGTLVDIKDVCLRVFLKRPKSNLSRRKR-SGFPMLVRWLVAFAVFVIAYERXXXXXXXXXXXXXXXXSTKNIDDXXXXXXXXXXXXXXXXXXXAYFTTRILKRLDTIVAIGLIIGMFVGFFAGATFFSYKIGVEGKDAVVSVKSHVEESNYAERMGVKRWMEENDVPGMVDKYTTQFYETVSEQIDNLAMQYNMTEFVTGIKHFVIXXXXXXXXXXXALMTPSPYTEKFLSLRKRVSNREWGQIYTEVDAIFRELIITREDLVQKAKGFAVKGADVSQRVLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITSESGGVTEQVMSMIPISKPARIRCVEVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVLESRYIVAVVFSISHIVLMDYGAAEIQESIPGYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKK 2021 WQ+MFRSAS RKP D P + + D K SLS D Q RLA+YIAMAHAGL F I +LY + +LLQEY RPIQWAILCSIPLRGIQETLV FWSEPL+LGLTE VLAVPV+VF FIG++VDIK+VC RVFL+R K +R+K +GF LV+WLV+F VFVIAYERIGG+GSL I+ LGF+ S+KN+D SLSAVSS RSNSFRRS +AYFT I+ RL+TIVAIGLI+ M VG G FFSYKIGVEGKDAV S+KSHVEESNYAE++G+K+WM+ENDVPGMVD YTT+FYETVSEQID+LAMQYNMTE VTGIKHFVI ++S STAL+ PSPYTEK +SLR RV N+EW QIY+EVD IFRELIITREDLV+KAKGFAVKG DVSQRV +SSASV+GGGAK + +IG SI++GA E FNFVSQLMVF WVLY LITSESGGVTEQVM+M+PIS AR RCVEVLD AISGVLLATAE+AFFQGCLTWL+FRL+ IHF+YMSTVLAFIS LLPIFP WFATIPAA++LVLE RYIVAV S++H+VLM+YGA+EIQ+ IPG +AYLTGLSIIGG+TLFPSA+EGAIMGPLITTVVIALKDLY EFVL +PKK Sbjct: 20 WQEMFRSASSRKPQ------DPPSSSSSTSSEPKPPCD-GGKTSLSAVDSQARLAIYIAMAHAGLVFAICVLYFVGRLLQEYLRPIQWAILCSIPLRGIQETLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSKPKRTRKKSDTGFSKLVKWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSFRRSHFTAYFTRGIMTRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEESNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGHPQNTSTPSTALIAPSPYTEKLMSLRTRVKNKEWSQIYSEVDVIFRELIITREDLVEKAKGFAVKGMDVSQRVFSSSASVVGGGAKFVLSIGTSIIWGATEFFNFVSQLMVFIWVLYVLITSESGGVTEQVMNMLPISPSARNRCVEVLDLAISGVLLATAELAFFQGCLTWLLFRLYNIHFLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIVAVTLSVTHLVLMEYGASEIQDDIPGSNAYLTGLSIIGGVTLFPSALEGAIMGPLITTVVIALKDLYAEFVLNDPKK 645
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Match: Q9FG69_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 860.136 bits (2221), Expect = 0.000e+0 Identity = 470/663 (70.89%), Postives = 537/663 (81.00%), Query Frame = 3 Query: 129 WQDMFRSASVRKPSPAPGNSDXXXXXXXXXXXXXXSTDPDHKNSLSG-DPQVRLALYIAMAHAGLAFTIFILYAICKLLQEYFRPIQWAILCSIPLRGIQETLVGFWSEPLRLGLTETVLAVPVAVFKAFIGTLVDIKDVCLRVFLKRPKSNLSRRKR-SGFPMLVRWLVAFAVFVIAYERXXXXXXXXXXXXXXXXSTKNIDDXXXXXXXXXXXXXXXXXXXAYFTTRILKRLDTIVAIGLIIGMFVGFFAGATFFSYKIGVEGKDAVVSVKSHVEESNYAERMGVKRWMEENDVPGMVDKYTTQFYETVSEQIDNLAMQYNMTEFVTGIKHFVIXXXXXXXXXXXALMTPSPYTEKFLSLRKRVSNREWGQIYTEVDAIFRELIITREDLVQKAKGFAVKGADVSQRVLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITSESGGVTEQVMSMIPISKPARIRCVEVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVLESRYIVAVVFSISHIVLMDYGAAEIQESIPGYSAYLTGLSIIGGMTLFPSAVE------------------------------GAIMGPLITTVVIALKDLYVEFVLEEPKK 2021 WQ+MFRSAS RKP D P + +PP+ P+ K SLS D Q RLA+YIAMAHAGLAF I +LY + KLLQEY RPIQWAILCSIPLRGIQETLV FWSEPL+LGLTE VLAVPV+VF FIG++VDIK+VC RVFL+R K +R+K +GF LV+WLV+F VFVIAYERIGG+GSL I+ LGF+ S+KN+D SLSAVSS RSNSFRRS +AYFT I+ RL+TIVAIGLI+ M VG G FFSYKIGVEGKDAV S+KSHVEESNYAE++G+K+WM+ENDVPGMVD YTT+FYETVSEQID+LAMQYNMTE VTGIKHFVI ++S STAL+TPSPYTEK +SLR RV NREW QIY+EVD IFRELIITREDLV+KAKGFAVKG DVSQRV +SSASV+GGGAK +F+IGN I+ GAAE FNF+SQLM+F WVLY LITSESGGVTEQVM+M+PI+ AR RCVEVLD AISGVLLATAEIAFFQGCLTWL+FRL+ IHF+YMSTVLAFIS LLPIFP WFATIPAA++LVLE RYIVAV+ S++H+VLM+YGA+EIQ+ IPG +AYLTGLSIIGG+TLFPSA+E GAIMGPLITTVVIALKDLY EFVL EPKK Sbjct: 20 WQEMFRSASSRKPQ------DPPSSSSSSPPRKPSGDGSSSKTSLSTVDSQARLAMYIAMAHAGLAFAICVLYFVGKLLQEYLRPIQWAILCSIPLRGIQETLVDFWSEPLKLGLTEVVLAVPVSVFNVFIGSIVDIKNVCFRVFLRRSKPKRTRKKNDTGFSKLVKWLVSFGVFVIAYERIGGIGSLVILSLGFLFSSKNVDSSLSAVSSLRSNSFRRSHFTAYFTRGIMTRLNTIVAIGLIVLMIVGSLTGVIFFSYKIGVEGKDAVYSLKSHVEESNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYNMTELVTGIKHFVIGHPQNTSTPSTALITPSPYTEKLMSLRTRVKNREWSQIYSEVDVIFRELIITREDLVEKAKGFAVKGMDVSQRVFSSSASVVGGGAKFVFSIGNLIISGAAEFFNFISQLMIFIWVLYILITSESGGVTEQVMNMLPINASARNRCVEVLDLAISGVLLATAEIAFFQGCLTWLLFRLYNIHFLYMSTVLAFISALLPIFPYWFATIPAALQLVLEGRYIVAVILSVTHLVLMEYGASEIQDDIPGSNAYLTGLSIIGGVTLFPSALEVRKLKDWVFMKFGTKIGDFVMFFSGILLLQGAIMGPLITTVVIALKDLYAEFVLNEPKK 676
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Match: A0A0A0K642_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G278730 PE=4 SV=1) HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0 Identity = 440/627 (70.18%), Postives = 519/627 (82.78%), Query Frame = 3 Query: 129 WQDMFRSASVRKPSPAPGNSDXXXXXXXXXXXXXXSTDPDHKNSLSGDPQVRLALYIAMAHAGLAFTIFILYAICKLLQEYFRPIQWAILCSIPLRGIQETLVGFWSEPLRLGLTETVLAVPVAVFKAFIGTLVDIKDVCLRVFLKRPKSNLSRRKRSGFPMLVRWLVAFAVFVIAYERXXXXXXXXXXXXXXXXSTKNIDDXXXXXXXXXXXXXXXXXXXAYFTTRILKRLDTIVAIGLIIGMFVGFFAGATFFSYKIGVEGKDAVVSVKSHVEESNYAERMGVKRWMEENDVPGMVDKYTTQFYETVSEQIDNLAMQYNMTEFVTGIKHFVIXXXXXXXX-XXXALMTPSPYTEKFLSLRKRVSNREWGQIYTEVDAIFRELIITREDLVQKAKGFAVKGADVSQRVLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITSESGGVTEQVMSMIPISKPARIRCVEVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVLESRYIVAVVFSISHIVLMDYGAAEIQESIPGYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVL 2006 WQDMFRS SVRKPSP P N + D +S SGDPQVRLALYIAMAHAGLAFTI LYA+ ++L+ Y RP+QWA+LCSIPLRGIQ+TL GFWSEPL+LGLTET+LA+PVAVFK F+GTLV ++VC RV L+R KS RR +S F L+RWLV+F +F++AYE G +GS+ ++ LGF+ S+K++D + VSSFRS SFRR+ +SA+FT +LKRL TIVAIGLI+ M V F AG+ FFSYKIGVEGKDA++S+K HVEESNYAER+GVK+WMEEND+PGM+D YT+QFYE V EQID+ AMQYNMTEFVTGIKH ++S+ ++S ST+L+TPSPYT+K +SLR VSN+EWGQIYTE+DAI RELIITREDLV+KAKG AV+G D+SQRV ASS SVLGG AK+M +IG SI+ GAAEVFNFVSQ MVFFWVLYYLITSESGGVTEQVM M+PI ARIRCVEVLD AISGVLLATAEIA +QGCLTWL+ RLFEIHF+Y+STVLAF+SPL PIFP WFATIPAA++L+LE RY+VA+ +I H+ LMDYG +EIQE IPG+S YL GLSIIGGMTLF SA+EGAIMGPLITTVVIALKDLYVEFVL Sbjct: 24 WQDMFRSGSVRKPSPDPQNQSSKL------------PQSDSNSSFSGDPQVRLALYIAMAHAGLAFTILTLYAVGRILEAYLRPLQWAVLCSIPLRGIQQTLEGFWSEPLQLGLTETLLAIPVAVFKVFVGTLVQFREVCFRVVLRRKKSGHVRRNQSVFSKLLRWLVSFWIFILAYENFGVIGSVSLLGLGFLFSSKSVDPTRYNVSSFRSLSFRRTAVSAFFTKGLLKRLKTIVAIGLIVAMIVVFLAGSVFFSYKIGVEGKDAMISLKLHVEESNYAERIGVKKWMEENDLPGMIDSYTSQFYEAVLEQIDSYAMQYNMTEFVTGIKHLALSSSRANSSGASTSLITPSPYTQKLMSLRNSVSNKEWGQIYTELDAIIRELIITREDLVEKAKGLAVQGMDISQRVFASSVSVLGGSAKLMLSIGRSIISGAAEVFNFVSQSMVFFWVLYYLITSESGGVTEQVMHMLPIEDSARIRCVEVLDHAISGVLLATAEIAIYQGCLTWLLLRLFEIHFLYVSTVLAFLSPLFPIFPSWFATIPAALQLLLEGRYVVAICLAIIHLALMDYGISEIQEDIPGHSEYLMGLSIIGGMTLFSSALEGAIMGPLITTVVIALKDLYVEFVL 638
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Match: A0A067EVW6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006268mg PE=4 SV=1) HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0 Identity = 465/630 (73.81%), Postives = 526/630 (83.49%), Query Frame = 3 Query: 69 MELVXXXXXXXXXXXXXXXXWQDMFRSASVRKPSPAPGNSDXXXXXXXXXXXXXXSTDPDHKNSLSGDPQVRLALYIAMAHAGLAFTIFILYAICKLLQEYFRPIQWAILCSIPLRGIQETLVGFWSEPLRLGLTETVLAVPVAVFKAFIGTLVDIKDVCLRVFLKRPKSNLSRRKRSGFPMLVRWLVAFAVFVIAYERXXXXXXXXXXXXXXXXSTKNIDDXXXXXXXXXXXXXXXXXXXAYFTTRILKRLDTIVAIGLIIGMFVGFFAGATFFSYKIGVEGKDAVVSVKSHVEESNYAERMGVKRWMEENDVPGMVDKYTTQFYETVSEQIDNLAMQYNMTEFVTGIKHFVIXXXXXXXXXXXALMTPSPYTEKFLSLRKRVSNREWGQIYTEVDAIFRELIITREDLVQKAKGFAVKGADVSQRVLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITSESGGVTEQVMSMIPISKPARIRCVEVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVLESRYIVAVVFSISHIVLMDYGAAEIQESIPGYSAYLTGLSIIGGMTLFPSAVEGAIMGPLI 1958 MELVP+S +P K SS+T PWQDMFRSAS+RKPS + P PP NST P K + SGDPQVRLALYIA+AHAGLAFT+FILY I KLLQ+Y RPIQWAIL SIPLRGIQ+ LV FWSEPL+LGLTETVLAVPVA+FK F+GTLVDIK+V +VFLK+ K+N R RSGF LVRWLV+FAVFVIAYE IG VGSL I+ LGF+ ST N+D ++SAVSSFRS SF R+ S+YFT RILKRL+TIVAIGLI+GM V F AG FFSYKIGVEGKDAV+S+KSHVEESNYAER+GVK+WMEENDVPGMVD+YTT FYETVSEQ+D+LAMQYNMTEFVTGIKHFVI SS +S AL + SPYT+K +SLR RV+ REW QIYTEVDAIFREL+ITREDLVQKAK FA +G +VSQRV A SASVLG AK+M + G I+ GAAEVFNFVSQLM+F WVLYYLITSESGGVTEQVM M+PISKPARIRCVEV+D AISGVLLAT EIAFFQGCLTWL+FR F+IHF+YMST LAFIS L PIFP WFATIPAA++L+LESRYIVA+ S+ H+VL+DYG EIQE IPGYS YLTGLSIIGGMTLFPSA+E ++G LI Sbjct: 1 MELVPFSDDPDKKSSSTTPPWQDMFRSASIRKPSATSNSQAPLPESHAPPPSQANSTAPGQKTTCSGDPQVRLALYIALAHAGLAFTLFILYFIFKLLQDYIRPIQWAILLSIPLRGIQQALVAFWSEPLQLGLTETVLAVPVAIFKVFVGTLVDIKEVFFKVFLKKLKNNGPRHSRSGFSKLVRWLVSFAVFVIAYETIGAVGSLVILALGFLFSTTNVDSTMSAVSSFRSKSFGRTPFSSYFTRRILKRLETIVAIGLIVGMMVVFLAGIIFFSYKIGVEGKDAVISIKSHVEESNYAERLGVKKWMEENDVPGMVDRYTTTFYETVSEQVDSLAMQYNMTEFVTGIKHFVIAPPAGSSEQSKALTSLSPYTQKLMSLRNRVTKREWKQIYTEVDAIFRELVITREDLVQKAKEFAYQGINVSQRVFAGSASVLGSSAKLMLSTGYLIISGAAEVFNFVSQLMIFLWVLYYLITSESGGVTEQVMGMLPISKPARIRCVEVIDNAISGVLLATVEIAFFQGCLTWLLFRFFKIHFLYMSTTLAFISALFPIFPFWFATIPAAVQLLLESRYIVAISLSVIHLVLLDYGTCEIQEDIPGYSPYLTGLSIIGGMTLFPSALELLVIGDLI 630
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy Swiss-Prot
Match: TM245_HUMAN (Transmembrane protein 245 OS=Homo sapiens GN=TMEM245 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.445e-16 Identity = 64/217 (29.49%), Postives = 114/217 (52.53%), Query Frame = 3 Query: 1422 YGAAEVFNFVSQLMVFFWVLYYLITS--ESGGVTEQVMSMIPISKPARIRCV--EVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVL-ESRYIVAVVFSISHIVLMDYGAAEIQESIPGYS-AYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKKKD*KN-TPYPS 2051 Y + NFV L++F L+YL++S E + V+S+ P+S+P + + ++EAI GV A+ ++A F G TWL +F I+ V++ + LA I +P ++A +PA ++L L + A++ I H++ + I I G YLTGL++ GG +EGAI+GP++ +++ ++Y ++ N TP+P+ Sbjct: 647 YSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLIFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNSVPTPNQTPWPA 861
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy Swiss-Prot
Match: TM245_MOUSE (Transmembrane protein 245 OS=Mus musculus GN=Tmem245 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.374e-16 Identity = 63/217 (29.03%), Postives = 114/217 (52.53%), Query Frame = 3 Query: 1422 YGAAEVFNFVSQLMVFFWVLYYLITS--ESGGVTEQVMSMIPISKPARIRCV--EVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVL-ESRYIVAVVFSISHIVLMDYGAAEIQESIP-GYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKKKD*KN-TPYPS 2051 Y + NFV L++F L+YL++S E + V+S+ P+S+P + + ++EAI GV A+ ++A F G TWL +F I+ V++ + LA I +P ++A +PA ++L L + A++ + H++ + I I G YLTGL++ GG +EGAI+GP++ +++ ++Y ++ N TP+P+ Sbjct: 644 YSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNSMPTPNQTPWPA 858
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy Swiss-Prot
Match: TM245_RAT (Transmembrane protein 245 OS=Rattus norvegicus GN=Tmem245 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.387e-16 Identity = 63/217 (29.03%), Postives = 113/217 (52.07%), Query Frame = 3 Query: 1422 YGAAEVFNFVSQLMVFFWVLYYLITS--ESGGVTEQVMSMIPISKPARIRCV--EVLDEAISGVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVL-ESRYIVAVVFSISHIVLMDYGAAEIQESIP-GYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKK-KD*KNTPYPS 2051 Y + NFV L++F L+YL++S E + V+S+ P+S+P + + ++EAI GV A+ ++A F G TWL +F I+ V++ + LA I +P ++A +PA ++L L + AV+ + H++ + I I G YLTGL++ GG +EGAI+GP++ +++ ++Y ++ TP+P+ Sbjct: 644 YSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRGVFDASLKMAGFYGLYTWLTHTVFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAVLLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNSMPTPSQTPWPA 858
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy Swiss-Prot
Match: TM245_BOVIN (Transmembrane protein 245 OS=Bos taurus GN=TMEM245 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.365e-15 Identity = 68/244 (27.87%), Postives = 125/244 (51.23%), Query Frame = 3 Query: 1350 VLASSASVLGGGAKIMFTIGNSILYGAAEVFNFVSQLMVFFWVLYYLITS--ESGGVTEQVMSMIPISKPARIRCV--EVLDEAIS---GVLLATAEIAFFQGCLTWLMFRLFEIHFVYMSTVLAFISPLLPIFPPWFATIPAAIELVL-ESRYIVAVVFSISHIVLMDYGAAEIQESIP-GYSAYLTGLSIIGGMTLFPSAVEGAIMGPLITTVVIALKDLYVEFVLEEPKKKD*KN-TPYPS 2051 V++ + S+L + TI + Y + NFV L++F L+YL++S E + V+S+ P+S+P + + ++EAI GV A+ ++A F G TWL +F I+ V++ + LA I +P ++A +PA ++L L + A++ + H++ + I I G YLTGL++ GG +EGAI+GP++ +++ ++Y ++ N TP+P+ Sbjct: 626 VMSRNVSLLFSTITTLLTI---LFYSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIGQSVEEAIRHSRGVFDASLKMAGFYGLYTWLTHTIFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQGLGCKAILLLVFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYL--GLEGAIIGPILLCILVVASNIYSAMLVSPTNSVPTPNQTPWPA 864 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0011016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011016 ID=g.arboreum_cottongen_reftransV1_0011016; Name=g.arboreum_cottongen_reftransV1_0011016; organism=Gossypium arboreum; type=contig; length=2436bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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