g.arboreum_cottongen_reftransV1_0004832, g.arboreum_cottongen_reftransV1_0004832 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0004832
Unique Nameg.arboreum_cottongen_reftransV1_0004832
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length797
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr12chromosomeg.arboreum_cottongen_reftransV1_0004832:1..797 .
Chr12:48527132..48529056 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: U5FXF5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s12220g PE=4 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 8.579e-115
Identity = 169/206 (82.04%), Postives = 185/206 (89.81%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVD-DQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MAMLLEDI++SVE+WL LIKKPQPYVDP+LDPVLLVPGIAGSIL AVD D  GKEERVWVRIL A+Y  RTKLWSRFDP TG++ +LDP T I VP  RYGL AIDVLDPDMI+GRDCV YFHDMIVEM+KWGFQEGKTLFGFGYDFRQSNRL ET++ LA+KLE VY+ASGGKKIN+ISHSMGGLLVKCFM LHSDIF+KYVKNW
Sbjct:    1 MAMLLEDIVRSVELWLNLIKKPQPYVDPSLDPVLLVPGIAGSILKAVDKDNGGKEERVWVRILAADYTCRTKLWSRFDPQTGRSVTLDPKTNIVVPDDRYGLHAIDVLDPDMIIGRDCVYYFHDMIVEMIKWGFQEGKTLFGFGYDFRQSNRLPETLECLAKKLESVYKASGGKKINIISHSMGGLLVKCFMSLHSDIFEKYVKNW 206          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: W9SSF9_9ROSA (Lecithine-cholesterol acyltransferase-like 4 OS=Morus notabilis GN=L484_018473 PE=4 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 7.302e-114
Identity = 161/205 (78.54%), Postives = 186/205 (90.73%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MA LLE+I+QSVE+WLKLIKKPQPYVDPNLDPVLLVPGIAGSIL AV D+NGKEERVWVRIL A+YKFRTKLWS FDP++G+T SLD  T+I VP  R+GL AID LDPDM++GR+CV YFHDMI+EM+ WGFQEGKTLFGFGYDFRQSNRLQ+T+DR + KLE +Y+ASGGKKIN+I+HSMGGLLVKCFM LH+D+F+KYVKNW
Sbjct:    1 MAALLEEIVQSVELWLKLIKKPQPYVDPNLDPVLLVPGIAGSILKAVGDENGKEERVWVRILSADYKFRTKLWSCFDPASGRTVSLDSKTSIVVPEERHGLYAIDALDPDMVIGRECVYYFHDMIMEMINWGFQEGKTLFGFGYDFRQSNRLQDTLDRFSAKLESIYKASGGKKINIITHSMGGLLVKCFMSLHTDVFEKYVKNW 205          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: A0A0D2T2J0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G049000 PE=4 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 1.276e-113
Identity = 167/205 (81.46%), Postives = 188/205 (91.71%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MAML  DI+QSVE+WLKLI+KPQPY+DP+LDPVLLVPGIAGSIL AVD QNG EERVWVRIL A+ KF +KLWSRFDPSTGKT SLDP+T+I VP  RYGL AIDVLDPD+I+G++ V YFHDMIVEM+KWGFQEGKTLFGFGYDFRQSNRLQ+T+DRLA KLE VY+ASGGKKIN+ISHSMGGLLVKCFMG+HSD+F+KYVKNW
Sbjct:    1 MAML-GDIVQSVEMWLKLIRKPQPYIDPDLDPVLLVPGIAGSILKAVDHQNGNEERVWVRILEADSKFCSKLWSRFDPSTGKTVSLDPSTSITVPEERYGLYAIDVLDPDLIIGQESVYYFHDMIVEMIKWGFQEGKTLFGFGYDFRQSNRLQDTLDRLAAKLESVYKASGGKKINIISHSMGGLLVKCFMGVHSDVFEKYVKNW 204          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: A0A067GCS8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009353mg PE=4 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.855e-113
Identity = 160/206 (77.67%), Postives = 189/206 (91.75%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIK-KPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MA+LLE+I+QSVE+WLKL++ KPQPYVDP+LDPVLLVPG+AGSIL +VD  NGK+ER+WVRILGA+++FRTKLWS+FDPSTG+T SLDPN+++ VP  RYGL AIDVLDPD+I+GRDCV YFHDMIV+M+KWGFQEGKTLFGFGYDFRQSNRLQ TM++ A KLE VY ASGGKKIN+ISHSMGGLLVKCF+ LHSDIF+KYV+ W
Sbjct:    1 MAVLLEEIVQSVELWLKLLRDKPQPYVDPDLDPVLLVPGVAGSILKSVDKANGKDERIWVRILGADHEFRTKLWSKFDPSTGRTVSLDPNSSVVVPEDRYGLYAIDVLDPDLIIGRDCVYYFHDMIVQMIKWGFQEGKTLFGFGYDFRQSNRLQGTMEQFAAKLEAVYNASGGKKINIISHSMGGLLVKCFLSLHSDIFEKYVQKW 206          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: M1ANR7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010352 PE=4 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 3.001e-113
Identity = 158/205 (77.07%), Postives = 184/205 (89.76%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MAML+E++++S+E+WLKLIKKPQ Y+DPNLDPVLLVPG+AGSIL AVD + G+ ERVWVRILGA+++F  KLW RFDPSTGKT +LDP+T+I+VP  RYGL AID LDPDMIVG DCV Y+HDMIVEML WG+QEGKTLFGFGYDFRQSNRLQETM+  A+KLE ++ ASGGKKIN+ISHSMGGLLVKCFM LHSDIF+KYVKNW
Sbjct:    1 MAMLIEELIKSIEMWLKLIKKPQEYIDPNLDPVLLVPGVAGSILNAVDKKTGRTERVWVRILGADHEFCDKLWCRFDPSTGKTTNLDPDTSIEVPEDRYGLHAIDNLDPDMIVGSDCVYYYHDMIVEMLSWGYQEGKTLFGFGYDFRQSNRLQETMECFAQKLESIHTASGGKKINIISHSMGGLLVKCFMALHSDIFEKYVKNW 205          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: V4W739_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014844mg PE=4 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.124e-112
Identity = 159/206 (77.18%), Postives = 188/206 (91.26%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIK-KPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MA+LLE+I+QSVE+WLK ++ KPQPYVDP+LDPVLLVPG+AGSIL +VD  NGK+ER+WVRILGA+++FRTKLWS+FDPSTG+T SLDPN+++ VP  RYGL AIDVLDPD+I+GRDCV YFHDMIV+M+KWGFQEGKTLFGFGYDFRQSNRLQ TM++ A KLE VY ASGGKKIN+ISHSMGGLLVKCF+ LHSDIF+KYV+ W
Sbjct:    1 MAVLLEEIVQSVELWLKFLRDKPQPYVDPDLDPVLLVPGVAGSILKSVDKANGKDERIWVRILGADHEFRTKLWSKFDPSTGRTVSLDPNSSVVVPEDRYGLYAIDVLDPDLIIGRDCVYYFHDMIVQMIKWGFQEGKTLFGFGYDFRQSNRLQGTMEQFAAKLEAVYNASGGKKINIISHSMGGLLVKCFLSLHSDIFEKYVQKW 206          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: A0A067KK09_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08597 PE=4 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 2.140e-112
Identity = 165/207 (79.71%), Postives = 185/207 (89.37%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLI-KKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGK-EERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MA+LLEDI+QSVE+WLKLI KKPQPY DPNLDPVLLVPG+AGSIL AVD+ N K +ERVWVRIL A+Y FRTKLWSRF+PSTG+TESLDPNT I VP  RYGL AIDVLDPD+++GRDCV YFHDMIVEM+ WGFQEGKTLFGFGYDFRQSNRL +TM+  A+KLE +Y ASGGKKIN+ISHSMGGLLVKCFM LH+DIF+KYV NW
Sbjct:    1 MAVLLEDIVQSVELWLKLIRKKPQPYADPNLDPVLLVPGVAGSILKAVDNDNDKRDERVWVRILRADYTFRTKLWSRFNPSTGRTESLDPNTRIVVPEDRYGLYAIDVLDPDLVIGRDCVYYFHDMIVEMITWGFQEGKTLFGFGYDFRQSNRLADTMECFAKKLESIYNASGGKKINIISHSMGGLLVKCFMSLHTDIFEKYVNNW 207          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: M1ANR6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400010352 PE=4 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 7.486e-112
Identity = 158/205 (77.07%), Postives = 184/205 (89.76%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MAML+E++++S+E+WLKLIKKPQ Y+DPNLDPVLLVPG+AGSIL AVD + G+ ERVWVRILGA+++F  KLW RFDPSTGKT +LDP+T+I+VP  RYGL AID LDPDMIVG DCV Y+HDMIVEML WG+QEGKTLFGFGYDFRQSNRLQETM+  A+KLE ++ ASGGKKIN+ISHSMGGLLVKCFM LHSDIF+KYVKNW
Sbjct:    1 MAMLIEELIKSIEMWLKLIKKPQEYIDPNLDPVLLVPGVAGSILNAVDKKTGRTERVWVRILGADHEFCDKLWCRFDPSTGKTTNLDPDTSIEVPEDRYGLHAIDNLDPDMIVGSDCVYYYHDMIVEMLSWGYQEGKTLFGFGYDFRQSNRLQETMECFAQKLESIHTASGGKKINIISHSMGGLLVKCFMALHSDIFEKYVKNW 205          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: Q71LX7_SOLLC (Lecithine cholesterol acyltransferase-like protein OS=Solanum lycopersicum GN=LOC544234 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 1.552e-110
Identity = 156/205 (76.10%), Postives = 183/205 (89.27%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQPYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            MAML+E++++S+E+WLKLIKKPQ Y+DP LDPVLLVPG+AGSIL AVD + G+ ERVWVRILGA+++F  KLW RFDPSTGKT +LDP+T+I+VP  RYGL AID LDPDMI+G DCV Y+HDMIVEML WG+QEGKTLFGFGYDFRQSNRLQETM+  A+KLE ++ ASGGKKIN+ISHSMGGLLVKCFM LHSDIF+KYVKNW
Sbjct:    1 MAMLIEELIKSIEMWLKLIKKPQEYIDPTLDPVLLVPGVAGSILNAVDKKTGRTERVWVRILGADHEFCDKLWCRFDPSTGKTTNLDPDTSIEVPEDRYGLYAIDNLDPDMIIGSDCVYYYHDMIVEMLSWGYQEGKTLFGFGYDFRQSNRLQETMECFAQKLESIHTASGGKKINIISHSMGGLLVKCFMALHSDIFEKYVKNW 205          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Match: B7FLE2_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 6.307e-108
Identity = 154/207 (74.40%), Postives = 180/207 (86.96%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQP--YVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            M MLLED+L+SVE+WL+LIKKPQP  YV+PNLDPVLLVPG+ GSIL AV++ +G +ERVWVR L A YK +TKLWS +DPSTGKT +LD  + I VP  R+GL AIDVLDPD+++G + V YFHDMIV+M KWG+QEGKTLFGFGYDFRQSNRLQETMDR AEKLEL+Y A+GGKKI++ISHSMGGLLVKCFM LHSDIF+KYVKNW
Sbjct:    1 MTMLLEDVLRSVELWLRLIKKPQPQAYVNPNLDPVLLVPGVGGSILNAVNESDGSQERVWVRFLSAEYKLKTKLWSCYDPSTGKTVTLDQKSRIVVPEDRHGLHAIDVLDPDLVIGSEAVYYFHDMIVQMQKWGYQEGKTLFGFGYDFRQSNRLQETMDRFAEKLELIYNAAGGKKIDLISHSMGGLLVKCFMTLHSDIFEKYVKNW 207          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy Swiss-Prot
Match: LCAT4_ARATH (Lecithin-cholesterol acyltransferase-like 4 OS=Arabidopsis thaliana GN=LCAT4 PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 5.358e-109
Identity = 160/206 (77.67%), Postives = 183/206 (88.83%), Query Frame = -2
Query:    2 MAMLLEDILQSVEIWLKLIKKPQ-PYVDPNLDPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 616
            M++LLE+I++SVE  LKL  + Q PYVDPNL+PVLLVPGIAGSIL AVD +NG EERVWVRI GA+++FRTK+WSRFDPSTGKT SLDP T+I VP  R GL AIDVLDPDMIVGR+ V YFH+MIVEM+ WGF+EGKTLFGFGYDFRQSNRLQET+D+ A+KLE VY+ASG KKINVISHSMGGLLVKCFMGLHSDIF+KYV+NW
Sbjct:    1 MSLLLEEIIRSVEALLKLRNRNQEPYVDPNLNPVLLVPGIAGSILNAVDHENGNEERVWVRIFGADHEFRTKMWSRFDPSTGKTISLDPKTSIVVPQDRAGLHAIDVLDPDMIVGRESVYYFHEMIVEMIGWGFEEGKTLFGFGYDFRQSNRLQETLDQFAKKLETVYKASGEKKINVISHSMGGLLVKCFMGLHSDIFEKYVQNW 206          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy Swiss-Prot
Match: LCAT3_ARATH (Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana GN=LCAT3 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 9.070e-51
Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = -2
Query:    2 DPVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYKFRTKLWSRFDPSTGKTESLDPNTTIKVPGGRYGLGAIDVLDPDMIVGRDC----VCYFHDMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMDRLAEKLELVYEASGGKKINVISHSMGGLLVKCFMGLHSDIFQKYVKNW 526
            DPVLLV GI GSIL +    +  E RVWVRI  AN  F+  LWS ++P TG TE LD N  + VP   +GL AID+LDP   V + C    V +FHDMI  ++  G+++G TLFG+GYDFRQSNR+   +  L +KLE  Y+ SGG+K+ +ISHSMGGL+V CFM LH + F KYV  W
Sbjct:   24 DPVLLVSGIGGSILHSKKKNSKSEIRVWVRIFLANLAFKQSLWSLYNPKTGYTEPLDDNIEVLVPDDDHGLYAIDILDPSWFV-KLCHLTEVYHFHDMIEMLVGCGYKKGTTLFGYGYDFRQSNRIDLLILGLKKKLETAYKRSGGRKVTIISHSMGGLMVSCFMYLHPEAFSKYVNKW 201          
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy Swiss-Prot
Match: PDAT2_ARATH (Putative phospholipid:diacylglycerol acyltransferase 2 OS=Arabidopsis thaliana GN=PDAT2 PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 5.116e-7
Identity = 56/170 (32.94%), Postives = 74/170 (43.53%), Query Frame = -2
Query:   44 PVLLVPGIAGSILTAVDDQNGKEERVWVRILGANYK--FRTKLWSRFDPSTGKTESLDPN--TTIKVPGGRYGLGAIDVLDPDMIVGRDCVCYFH--DMIVEMLKWGFQEGKTLFGFGYDFRQSNRLQETMD----RLAEKLELVYEASGGKKINVISHSMGGLLVKCFM 523
            PV+LVPGI    L   + +   E     R+ GA++    R  L      S      LDP+      VPG    L A D   P         CYF    +I  + K G+ EGK L    YD+R S    E  D    RL  K+EL+Y  +G KK+ V+ HSMG +    F+
Sbjct:   92 PVILVPGIVTGGLELWEGRPCAEGLFRKRLWGASFSEILRRPLCWLEHLSLDSETGLDPSGIRVRAVPG----LVAADYFAP---------CYFAWAVLIENLAKIGY-EGKNLHMASYDWRLSFHNTEVRDQSLSRLKSKIELMYATNGFKKVVVVPHSMGAIYFLHFL 247          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
U5FXF5_POPTR8.579e-11582.04Uncharacterized protein OS=Populus trichocarpa GN=... [more]
W9SSF9_9ROSA7.302e-11478.54Lecithine-cholesterol acyltransferase-like 4 OS=Mo... [more]
A0A0D2T2J0_GOSRA1.276e-11381.46Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067GCS8_CITSI2.855e-11377.67Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
M1ANR7_SOLTU3.001e-11377.07Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
V4W739_9ROSI1.124e-11277.18Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067KK09_JATCU2.140e-11279.71Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M1ANR6_SOLTU7.486e-11277.07Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
Q71LX7_SOLLC1.552e-11076.10Lecithine cholesterol acyltransferase-like protein... [more]
B7FLE2_MEDTR6.307e-10874.40Putative uncharacterized protein (Fragment) OS=Med... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0004832 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LCAT4_ARATH5.358e-10977.67Lecithin-cholesterol acyltransferase-like 4 OS=Ara... [more]
LCAT3_ARATH9.070e-5152.51Phospholipase A(1) LCAT3 OS=Arabidopsis thaliana G... [more]
PDAT2_ARATH5.116e-732.94Putative phospholipid:diacylglycerol acyltransfera... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availablePANTHERPTHR11440LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATEDcoord: 1..205
NoneNo IPR availablePANTHERPTHR11440:SF3LECITHIN-CHOLESTEROL ACYLTRANSFERASE-LIKE 4coord: 1..205
IPR029058Alpha/Beta hydrolase foldGENE3D3.40.50.1820coord: 31..48
e-value: 2.0E-14
score: 53.5
coord: 118..200
e-value: 2.0E-14
score: 53.5
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 120..200
coord: 27..44
IPR003386Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferasePFAMPF02450LCATcoord: 76..193
e-value: 5.1E-17
score: 62.0

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0004832 ID=g.arboreum_cottongen_reftransV1_0004832; Name=g.arboreum_cottongen_reftransV1_0004832; organism=Gossypium arboreum; type=contig; length=797bp
TCCAATTCTTCACGTATTTCTGAAAAATATCGCTGTGAAGGCCCATGAAA
CATTTTACCAAAAGGCCGCCCATCGAGTGACTTATAACATTTATCTTCTT
CCCTCCTGAAGCTTCATATACCAACTCTAATTTCTCTGCCAGCCGATCCA
TTGTTTCTTGCAACCTATTACTTTGGCGAAAATCATAACCAAACCCAAAG
AGTGTTTTCCCTTCTTGGAAACCCCATTTGAGCATTTCAACAATCATATC
GTGAAAATAACAAACACAGTCACGTCCCACGATCATATCAGGGTCCAATA
CATCAATGGCGCCCAGGCCATATCTTCCTCCAGGGACTTTAATAGTTGTA
TTTGGATCCAAAGATTCAGTTTTACCAGTAGAAGGATCAAAACGAGACCA
GAGCTTGGTCCGGAACTTGTAATTGGCACCGAGAATCCGAACCCATACCC
GTTCTTCTTTACCATTCTGATCATCCACGGCAGTCAAAATCGAGCCGGCG
ATACCCGGAACTAATAAAACCGGGTCCAAATTCGGGTCGACGTAAGGTTG
GGGTTTCTTTATCAGCTTCAACCATATCTCCACCGATTGTAAAATATCTT
CCAACAACATCGCCATCCCAAATCAAAAACTAATTACAATTTCCCAAAAA
AAAATAAAATAAAAAAAGGAAAGAATATGTGATTAAATATTTAAGAAATG
TGAAATTACTATGGGGAAATTGAGATTTTTTTTTATTTTAGGGTTTGAGA
TTTCGGAGGGGAAAGAGTTTATCACGTAGAGTTAAAGAGGAGGAAAG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR003386LACT/PDAT_acylTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0008374O-acyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process