g.arboreum_cottongen_reftransV1_0019423, g.arboreum_cottongen_reftransV1_0019423 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: F6HT59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01910 PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 5.153e-69 Identity = 130/267 (48.69%), Postives = 163/267 (61.05%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMHGK------------KNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKAS 785 MGKE ELWDDSALI+AFD+AMSKYK MHGK KN + ++ DEA +A + S+ +N+ E+E ++ +KEN+ V P+ ++DSS LP+QD+ YS+SQ +DY QLLNQYYEVE++RQ ILQQL Q G+WN +S EGSS QWGT +SQE + TSQA+H T++CSCCPY Q + T CT P CSL VGK + A D DIVKTAMG AEKAISSM K S Sbjct: 1 MGKEGELWDDSALINAFDHAMSKYKIMHGKGHHDGSTGGVEVKNIMGENACNLADESDEAKTTMEADDKSNVASNSTAEIEKTNNISSIKENYCVVPSAPKPHVDSSDVLPVQDEPKVG-GYSNSQGVEDYTQLLNQYYEVEEQRQKILQQLHQLGNWNNHFSAEGSSY-VQWGTGSSSQECQLLTSQASHPTMVCSCCPYVSQCVVTPCT-LPACSLGEACVGKTCIDATAATGPEKRVAVEDGDIVKTAMGTAEKAISSMRMKIS 264
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: B9RZ14_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1316170 PE=4 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 1.860e-63 Identity = 120/259 (46.33%), Postives = 155/259 (59.85%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSS---TSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASI 788 MGK ELWDDSALI+AFDNAMS YKKMH +K+ + + VS T D E S+ +N +E+ AK + V+ENH + P+ I SS +L + D YS Q ++ YNQLL QYY++E+KRQ IL QLQQ G ++Y Y EG ++ QWGT C SQ++ +P SQ VICSCCPYAC+ A CTS+ CS GT GK+ + M P +D DIVK AMGAAE+AIS+ T +SI Sbjct: 1 MGKGEELWDDSALINAFDNAMSSYKKMHSRKSKDNSADVSSASTDQSHAAISDLDEKSNVPSNAAIELGEAKKLTAVQENHHLDSIEPQPGIYSSGGQDALAVND-------YSYVQNSEGYNQLLTQYYDIEEKRQRILHQLQQLGGYDYHYPAEGFGSSQQWGT-CCSQDHSVPKSQP----VICSCCPYACRCSAVPCTSFSACSFDGTCDGKLCNNSSEVMGLAKSVPLVDGDIVKIAMGAAERAISTTKTISSI 247
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: M5WFF4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019223mg PE=4 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 5.830e-63 Identity = 125/249 (50.20%), Postives = 154/249 (61.85%), Query Frame = 3 Query: 210 TGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 T E ++ VKENH V PE Y Q QD YS SQ A DYNQLLNQYYEVE+KRQ +L+QL QFG WNYQYSGE S + Q T+ +SQ++ +PT Q ++ V+CSCCPY Q L C S+P G+ G+ T A + G D IVKTAMG AE+A+SSM K S + E+K+ + E EM +STS ETDLT++LNAWYSAGF+TGKYLVEQS+AKRR Sbjct: 1 TTAEAGETSNISEVKENHHVDSHVPEPY--------SQVAQDVQNDYSYSQGAADYNQLLNQYYEVEEKRQKLLEQLHQFGGWNYQYSGEVSGSIVQGDTAYSSQQHAVPTCQPSNPAVVCSCCPYLGQCLMAPCISFPASLPGGSCAGRTCTNACLATSPGQSFSLEDDRIVKTAMGTAERALSSMKMKIS-GDSNISEDKKDEKREGEMAESTSSETDLTLVLNAWYSAGFFTGKYLVEQSVAKRRH 240
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: I1J4R1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 4.219e-58 Identity = 134/323 (41.49%), Postives = 185/323 (57.28%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANVSVS---VHQTGDEAIKPRDAGEN--SSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGK----ISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 MGKE +LWDDS+LI+AFD A+S + KMH GK A + + + G RDA N ++ ++G +K ++ENH + Q + +DS++ +Q+ Q+G Y+ +Q DYNQL+ QYYE+E+KR IL+ L Q+G WNYQ SS+ + Q+Y + Q + +C+CCP Q L CTS P CSL G+SVGK +S E + M++ P D +I K AMGAAEKA+S++ T S + NVNE + E++N S ETDL +LNAWYSAGFYTGKYL EQSI RQ Sbjct: 1 MGKEGDLWDDSSLINAFDQAISTFNKMHSSGKHKGAATAREADTIIGENGSNVDTTRDADTNIPATDVPDSGETGNLSK----LEENHQTESQVDQPCLDSTSGQDIQNAQNG---YAYAQGGDDYNQLVVQYYELEEKRAKILEHLNQYGGWNYQNVAADSSSGVPYSN---FQDYSMAAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVGKQCNDLSVEKDHKMSF----PCEDGEIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSEPEKINGS---ETDLAAVLNAWYSAGFYTGKYLAEQSIQNGRQ 306
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A059C024_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00229 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.367e-57 Identity = 133/325 (40.92%), Postives = 187/325 (57.54%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMHGKKNSEANVSVSVHQTGDEAIKPRDAGENSSSR-------ANTGMEMEAAKDVEP-VKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGE--GSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLP-PFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXX--XXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 M KE +LWDDS LI+AFDNAMSKYK MHG+KNS A+ V V ++ ++ + R A+ E+ + +P V N V + ++ D S +P+QD + A+S SQ A+ Y+QLL +YYE+E KR+ +LQQL Q+G WNYQ+ + G++ +A W T+ A+ E +P+ + V SCCPY CQS C CS T VG++ NG + + P DSDI +TA+ AAEKA+SS+ S + ++K E E Q+ S TDL+V+LNAWYSAGFYTGKYLVE+S ++R Sbjct: 1 MAKEGDLWDDSGLINAFDNAMSKYKSMHGQKNSNASKGVEVVDEQEKGFSSPGQEDHVTMREEPKHAVASNCAEVPGEANNDPSVNGNPCVDVLAQGSHPDLSNGVPVQDTLE---AHSYSQYAEGYDQLLAEYYELEQKREKVLQQLHQYGYWNYQFPQDATGAAPSAPWTTATAAVEPSVPSGHSC--PVGSSCCPYVCQSFEAPCP-VSTCSFGKTCVGQVC---NGTPSTTHQKVPVEDSDITRTAIEAAEKALSSLKIGRSTGEEGGSGYFSDKEKKLEGETLQTESSGTDLSVVLNAWYSAGFYTGKYLVERSDREKRH 316
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: C6TF46_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.487e-57 Identity = 133/323 (41.18%), Postives = 184/323 (56.97%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANVSVS---VHQTGDEAIKPRDAGEN--SSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGK----ISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 MGKE +LWDDS+LI+AFD A+S + KMH GK A + + + G RDA N ++ ++G +K ++ENH + Q + +DS++ +Q+ Q+G Y+ +Q DYNQL+ QYYE+E+KR IL+ L Q+G WNYQ SS+ + Q+Y + Q + +C CCP Q L CTS P CSL G+SVGK +S E + M++ P D +I K AMGAAEKA+S++ T S + NV+E + E++N S ETDL +LNAWYSAGFYTGKYL EQSI RQ Sbjct: 1 MGKEGDLWDDSSLINAFDQAISTFNKMHSSGKHKGAATAREADTIIGENGSNVDTTRDADTNIPATDVPDSGETGNLSK----LEENHQTESQVDQPCLDSTSGQDIQNAQNG---YAYAQGGDDYNQLVVQYYELEEKRAKILEHLNQYGGWNYQNVAADSSSGVPYSN---FQDYSMAAYQVSDPNAVCICCPCYSQCLPAPCTSVPGCSLGGSSVGKQCNDLSVEKDHKMSF----PCEDGEIHKMAMGAAEKALSTIRTTISGDFNVDEGKERNNSEPEKINGS---ETDLAAVLNAWYSAGFYTGKYLAEQSIQNGRQ 306
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: I1L505_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 2.358e-55 Identity = 132/322 (40.99%), Postives = 183/322 (56.83%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANV----SVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGK----ISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 MGKE +LWDDS LI+AFD A+S Y KMH GK A+V + + G R G +++ A ++ ++ ++ENH + Q ++DS++ +Q+ Q+G Y+ +QA YNQL+ QYYE+E+KR IL+QL Q+G WNYQ S++ + SQ+Y Q + +C+CCP Q L CTS P CSL G+SV K +S E + M++ P D I K AMGAAEKA+S++ T S + NVNE + EE+N S TDL +LNAWYSAGF+TGKYL EQSI +RQ Sbjct: 1 MGKEGDLWDDSVLINAFDQAISTYNKMHSSGKHKDAASVQEEAKTLIGENGSNFDTTR--GADTNIPATDALDSGETGNLSKLEENHHTESQVD--HLDSTSGQDIQNAQNG---YAYAQAVDGYNQLVVQYYELEEKRLKILEQLNQYGGWNYQNVAADSNSGVPYSN---SQDYSATAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVSKPCSNLSVEMDRKMSF----PCEDGKIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSELEEINGSG---TDLAAVLNAWYSAGFFTGKYLAEQSIQNKRQ 305
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: A0A0B2S2R0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014945 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 2.358e-55 Identity = 132/322 (40.99%), Postives = 183/322 (56.83%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANV----SVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGK----ISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 MGKE +LWDDS LI+AFD A+S Y KMH GK A+V + + G R G +++ A ++ ++ ++ENH + Q ++DS++ +Q+ Q+G Y+ +QA YNQL+ QYYE+E+KR IL+QL Q+G WNYQ S++ + SQ+Y Q + +C+CCP Q L CTS P CSL G+SV K +S E + M++ P D I K AMGAAEKA+S++ T S + NVNE + EE+N S TDL +LNAWYSAGF+TGKYL EQSI +RQ Sbjct: 1 MGKEGDLWDDSVLINAFDQAISTYNKMHSSGKHKDAASVQEEAKTLIGENGSNFDTTR--GADTNIPATDALDSGETGNLSKLEENHHTESQVD--HLDSTSGQDIQNAQNG---YAYAQAVDGYNQLVVQYYELEEKRLKILEQLNQYGGWNYQNVAADSNSGVPYSN---SQDYSATAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVSKPCSNLSVEMDRKMSF----PCEDGKIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSELEEINGSG---TDLAAVLNAWYSAGFFTGKYLAEQSIQNKRQ 305
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: C6TE52_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.211e-54 Identity = 133/324 (41.05%), Postives = 182/324 (56.17%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANVSVSVHQTGDEAIKPRDAGENSSSRANTGMEMEAAKD------VEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGK----ISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSMTTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRRQ 956 MGKE +LWDDS LI+AFD A+S Y KMH GK A SV + I + +++ A+T + A D + ++ENH + Q ++DS++ +Q+ Q+G Y+ +QA YNQL+ QYY +E+KR IL+QL Q+G WNYQ S++ + SQ+Y Q + +C+CCP Q L CTS P CSL G+SV K +S E + M++ P D I K AMGAAEKA+S++ T S + NVNE + EE+N S TDL +LNAWYSAGF+TGKYL EQSI +RQ Sbjct: 1 MGKEGDLWDDSVLINAFDQAISTYNKMHSSGKHKDAA----SVQEEAKTLIGENGSNFDTTRGADTNIPATDALDSGETGNLSKLEENHHTESQVD--HLDSTSGQDIQNAQNG---YAYAQAVDGYNQLVVQYYALEEKRLKILEQLNQYGGWNYQNVAADSNSGVPYSN---SQDYSATAYQVSDPNAVCTCCPCYSQCLPAPCTSVPGCSLGGSSVSKPCSNLSVEMDRKMSF----PCEDGKIHKMAMGAAEKALSTIRTTISGDFNVNEGKERNNSELEEINGSG---TDLAAVLNAWYSAGFFTGKYLAEQSIQNKRQ 305
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Match: M1B6P2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014793 PE=4 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.689e-48 Identity = 126/317 (39.75%), Postives = 170/317 (53.63%), Query Frame = 3 Query: 21 MGKESELWDDSALIDAFDNAMSKYKKMH--GKKNSEANVSVSVHQTGDEAIKPRD-AGENSSSRANTGMEMEAAKDVEPVKENHTVKLQTPETYIDSSTSLPMQDKQDGNMAYSDSQAAQDYNQLLNQYYEVEDKRQMILQQLQQFGSWNYQYSGEGSSTAAQWGTSCASQEYPIPTSQAAHSTVICSCCPYACQSLATTCTSYPCCSLAGTSVGKISTEPNGAMAYGNLPPFIDSDIVKTAMGAAEKAISSM---TTKASIXXXXXXXXXXXXXXXXXXXQSTSCETDLTVLLNAWYSAGFYTGKYLVEQSIAKRR 953 MG E++LWDDSAL++AF++A+SKYK MH G K S +V+ G +K ++ +NS +T EM A + VKEN + + PE + + L Q+ QD + S SQ+ +DYNQLL +YYE+ED+RQ ILQQL QFG W Q SG ASQE+ S + T CPY CQS + CT+ PCC + P + ++V TAM AAEKA+SS+ + AS+N E + + ++ ETDL +LNAWYSAGFYTGKYL EQS K+R Sbjct: 1 MG-ENDLWDDSALVNAFNDAVSKYKIMHSKGAKVSSKEENVTAPDDGSNVLKSKEERDDNSKVTPDTTTEMGDASSLPLVKENSSFEAIPPENH---TGQLNEQNTQDKAIENSSSQSLEDYNQLLYKYYELEDQRQKILQQLNQFGIWGDQNSGS------------ASQEHQAYASHNLNQTDSSFYCPYGCQSWVSPCTASPCCLCVNQDDKPCDASLQCVQEKKSSPQ--NPNLVDTAMKAAEKALSSLKQASNTASLNSFAKEGKQIEMINPVAAEKTGGLETDLAEVLNAWYSAGFYTGKYLSEQS--KKR 297 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0019423 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0019423 ID=g.arboreum_cottongen_reftransV1_0019423; Name=g.arboreum_cottongen_reftransV1_0019423; organism=Gossypium arboreum; type=contig; length=1396bpback to top |