g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: D7STF6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g01160 PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 4.801e-85 Identity = 152/188 (80.85%), Postives = 167/188 (88.83%), Query Frame = -3 Query: 6 LIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 569 LI V RV+GN+EGDALNALK+N+ DPNNVLQSWD TLVNPCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG L NLQYLELYSNNISG IP+ELGNLT LVSLDLY+NKL+G IPTTL +L KLRFLRLNNN+L GTIPRSLTT+ TLQVLDLSNN L GD+PV+GSFSLFTPISF NN+LN Sbjct: 13 LIIVFSAFLRVSGNSEGDALNALKSNLADPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKIPEELGNLTNLVSLDLYMNKLSGPIPTTLAKLAKLRFLRLNNNTLTGTIPRSLTTVMTLQVLDLSNNQLTGDIPVDGSFSLFTPISFNNNRLN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A059AT53_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02690 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.721e-85 Identity = 154/193 (79.79%), Postives = 166/193 (86.01%), Query Frame = -3 Query: 15 RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 593 R I LWL+ R GNAEGDALNALKTN+ DP NVLQSWDPTLVNPCTWFHVTCNS+NSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNI+G +P+ELGNLT LVSLDLYLNKL G IP TLG+L KLRFLRLNNNSL+GTIP SLTTI+TLQVLDLSNN L GD+P+NGSFSLFTPISF N Sbjct: 6 RAILGFLWLVLASRFLPRARGNAEGDALNALKTNLADPGNVLQSWDPTLVNPCTWFHVTCNSDNSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNITGKVPEELGNLTNLVSLDLYLNKLDGPIPVTLGKLAKLRFLRLNNNSLSGTIPMSLTTINTLQVLDLSNNQLEGDIPINGSFSLFTPISFNGN 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A067ERM1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007200mg PE=4 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 6.003e-85 Identity = 152/192 (79.17%), Postives = 164/192 (85.42%), Query Frame = -3 Query: 21 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFA 596 +R++ L I DL RVA NAEGDALNALKTN+ DPNNVLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG L NLQYLELYSNNISG +P+ELGNLT LVSLDLYLN L G IPTTLG+L KLRFLRLNNNSL G IPRSLT +++LQVLDLSNN L GD+P NGSFSLFTPISFA Sbjct: 5 ERVVWAFLVSILFFDLLLRVASNAEGDALNALKTNLADPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFA 196
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A078I8E5_BRANA (BnaA03g52520D protein OS=Brassica napus GN=BnaA03g52520D PE=4 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 2.013e-84 Identity = 151/190 (79.47%), Postives = 167/190 (87.89%), Query Frame = -3 Query: 12 FCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 581 F LWLI V DL R +GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCN +NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP+ LGNLTELVSLDLYLN L+G IP++LG+LKKLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN K Sbjct: 11 FFLWLILVFDLVLRTSGNAEGDALSALKNSLSDPNKVLQSWDATLVTPCTWFHVTCNPDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPETLGNLTELVSLDLYLNNLSGPIPSSLGRLKKLRFLRLNNNSLSGEIPRSLTAVSSLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D3BLM7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 2.570e-84 Identity = 150/186 (80.65%), Postives = 167/186 (89.78%), Query Frame = -3 Query: 18 LWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFAN 575 LWL+ V DL RVAGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNSENSVTRVDLGNA+L+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP +LG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN Sbjct: 7 LWLLLVFDLVLRVAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSENSVTRVDLGNADLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPKSLGRLQKLRFLRLNNNSLSGEIPRSLTAVLSLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 192
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.048e-18 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSE-NSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N +G L +K ++ DP++ L SW+ +PC W V+C + +SVT VDL +ANL G + L NL +L LY+N+I+ T+P + L +LDL N LTG++P TL + L L L N+ +G IP S + L+VL L N L G +P Sbjct: 17 NQDGFILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIP 173 HSP 2 Score: 66.6254 bits (161), Expect = 5.948e-11 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3 Query: 63 QLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 359 ++ P+ G+L NL+ + L ++ G IPD LG L++LV LDL LN L G IP +LG L + + L NNSL G IP L + +L++LD S N L G +P Sbjct: 196 RIPPEFGNLTNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIP 294 HSP 3 Score: 64.6994 bits (156), Expect = 2.214e-10 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = -3 Query: 12 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP--------------VNGSFSLFTPISFANNK 398 V +++L N +LTG++ P+LG+L +L+ L+ N ++G IPDEL + L SL+LY N L G++P ++ L +R+ N L G +P+ L L+ LD+S N GD+P ++ SFS P S A+ + Sbjct: 255 VVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP-LESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDLGLNSPLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCR 396 HSP 4 Score: 61.6178 bits (148), Expect = 2.559e-9 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 57 LGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 383 L N TG L ++GSL NL L N SG++PD L +L EL +LDL+ N+ +G++ + + KKL L L +N G IP + ++ L LDLS N G +PV+ Sbjct: 451 LSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVS 559 HSP 5 Score: 60.8474 bits (146), Expect = 5.489e-9 Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = -3 Query: 45 LGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFS 383 L +L GQ+ LG L L L+L N++ G IP LG LT +V ++LY N LTG+IP LG LK LR L + N L G IP L + L+ L+L N L G++P + + S Sbjct: 212 LTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRV-PLESLNLYENNLEGELPASIALS 323 HSP 6 Score: 58.9214 bits (141), Expect = 1.908e-8 Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 63 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 389 +DL +L G + P LG L N+ +ELY+N+++G IP ELGNL L LD +N+LTG IP L + L L L N+L G +P S+ L + + N L G +P Sbjct: 234 LDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCR-VPLESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLP 341
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5524_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana GN=At5g65240 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.639e-18 Identity = 70/160 (43.75%), Postives = 97/160 (60.62%), Query Frame = -3 Query: 63 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLT-GQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 539 V+ +A+GDAL AL++++ L W+ V+PCTW V C+ + VT V L N + G L +G L L+ L L N I G IP+ +GNL+ L SLDL N LT IP+TLG LK L+FL L+ N+L G+IP SLT + L + L +N L G++P Sbjct: 18 VSPDAQGDALFALRSSLRASPEQLSDWNQNQVDPCTWSQVICDDKKHVTSVTLSYMNFSSGTLSSGIGILTTLKTLTLKGNGIMGGIPESIGNLSSLTSLDLEDNHLTDRIPSTLGNLKNLQFLTLSRNNLNGSIPDSLTGLSKLINILLDSNNLSGEIP 177
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y1668_ARATH (Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.975e-18 Identity = 67/183 (36.61%), Postives = 99/183 (54.10%), Query Frame = -3 Query: 63 MTQRLISFCLWLIFVLDLAFRVAG--NAEGDALNALKTNMVD-PNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 602 M+Q + C F+L F +A N +G AL + K ++ + ++V +W+ + NPC+W VTCN + V + L N L+G L P +GSL +L+++ L N+ G +P EL L L SL L N +G +P +G LK L L L+ NS G+I SL L+ L LS N GD+P Sbjct: 1 MSQLFLILC----FILTHFFAIATSLNDQGLALLSFKQSIQNQSDSVFTNWNSSDSNPCSWQGVTCNYDMRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVLSGNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLP 179
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y1723_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.810e-18 Identity = 62/180 (34.44%), Postives = 87/180 (48.33%), Query Frame = -3 Query: 63 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 602 M R+ + ++ + N EG L K + D N L SW+ NPC W + C +VT VDL NL+G L P + L L+ L + +N ISG IP +L L LDL N+ G IP L + L+ L L N L G+IPR + + +LQ L + +N L G +P Sbjct: 1 MRGRICFLAIVILCSFSFILVRSLNEEGRVLLEFKAFLNDSNGYLASWNQLDSNPCNWTGIACTHLRTVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQDLSLCRSLEVLDLCTNRFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIP 180 HSP 2 Score: 73.9442 bits (180), Expect = 1.985e-13 Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 6 NLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 371 L+G++ P +G++ L+ L L+ N +G+IP E+G LT++ L LY N+LTG+IP +G L + + N L G IP+ I L++L L N L+G +P G +L + + N+LN Sbjct: 246 RLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLN 368 HSP 3 Score: 72.4034 bits (176), Expect = 6.289e-13 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = -3 Query: 63 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 398 +T ++L L+G + LG L NL+ L L +NN +G IP E+GNLT++V ++ N+LTG IP LG ++ L L+ N +G I + L + L++L LS+N L G++P Sbjct: 477 LTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIP 588 HSP 4 Score: 67.3958 bits (163), Expect = 2.846e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = -3 Query: 48 LTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSF 368 TG + ++G L ++ L LY+N ++G IP E+GNL + +D N+LTG IP G + L+ L L N L G IPR L + L+ LDLS N L G +P F Sbjct: 271 FTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQF 377 HSP 5 Score: 65.0846 bits (157), Expect = 1.745e-10 Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = -3 Query: 9 TCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKL 419 TC S +T++ LG+ LTG L +L +L NL LEL+ N +SG I +LG L L L L N TG+IP +G L K+ +++N L G IP+ L + T+Q LDLS N G + G + ++N+L Sbjct: 449 TCKS---LTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRL 583 HSP 6 Score: 65.0846 bits (157), Expect = 1.879e-10 Identity = 50/132 (37.88%), Postives = 68/132 (51.52%), Query Frame = -3 Query: 6 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 398 +D LTG + + G + NL+ L L+ N + G IP ELG LT L LDL +N+L G IP L L L L+L +N L G IP + VLD+S N L G +P + F +S +NKL+ Sbjct: 309 AAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLS 440 HSP 7 Score: 63.5438 bits (153), Expect = 6.983e-10 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = -3 Query: 12 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTEL-VSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 389 + L + LTG++ G L L L+L N +S IP ELG LT L +SL++ N L+G IP +LG L+ L L LN+N L+G IP S+ + +L + ++SNN LVG VP F +FA N Sbjct: 576 LRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNH 702 HSP 8 Score: 63.1586 bits (152), Expect = 9.212e-10 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 60 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPV 398 + R+ L N N TG++ P++G+L + + SN ++G IP ELG+ + LDL NK +G I LGQL L LRL++N L G IP S + L L L N L ++PV Sbjct: 501 LERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPV 613 HSP 9 Score: 59.3066 bits (142), Expect = 1.520e-8 Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = -3 Query: 63 LTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 368 L G L QL L NL L L+ N +SG IP +GN++ L L L+ N TG IP +G+L K++ L L N L G IPR + + +D S N L G +P Sbjct: 223 LEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIP 324 HSP 10 Score: 55.0694 bits (131), Expect = 4.210e-7 Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = -3 Query: 9 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKL 389 + G +G + ++ +L+ L L N + G++P +L L L L L+ N+L+G+IP ++G + +L L L+ N G+IPR + + ++ L L N L G++P G+ I F+ N+L Sbjct: 192 IRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQL 319
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: PXL1_ARATH (Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.664e-17 Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWD--------PTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N+E + L A K+++ DP+N LQ W LV+ C W V C++ V ++ L N NL+G + Q+ S P+LQ L+L +N ++P L NLT L +D+ +N G P LG L + ++N+ +G +P L TL+VLD G VP Sbjct: 28 NSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELVH-CHWTGVHCDANGYVAKLLLSNMNLSGNVSDQIQSFPSLQALDLSNNAFESSLPKSLSNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRGGYFEGSVP 190 HSP 2 Score: 79.7221 bits (195), Expect = 3.282e-15 Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = -3 Query: 6 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 389 +DL NLTGQ+ LG L L + LY N ++G +P ELG +T LV LDL N++TG+IP +G+LK L+ L L N L G IP + + L+VL+L N L+G +PV+ G S + ++NKL+ Sbjct: 250 LDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSNKLS 378 HSP 3 Score: 70.4774 bits (171), Expect = 2.750e-12 Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 63 NSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 404 +S+ + LG G++ + G L LQYL+L N++G IP LG L +L ++ LY N+LTG +P LG + L FL L++N + G IP + + LQ+L+L N L G +P Sbjct: 221 SSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIP 334 HSP 4 Score: 69.707 bits (169), Expect = 4.952e-12 Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = -3 Query: 57 NLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 371 N G++ +G L +L+ + L N G IP+E G LT L LDL + LTG IP++LGQLK+L + L N L G +PR L + +L LDLS+N + G++P+ Sbjct: 208 NFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPME 312 HSP 5 Score: 60.8474 bits (146), Expect = 4.950e-9 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = -3 Query: 63 SVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 401 S+ +DL + +TG++ ++G L NLQ L L N ++G IP ++ L L L+L+ N L G +P LG+ L++L +++N L+G IP L L L L NN G +P Sbjct: 294 SLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIP 406 HSP 6 Score: 59.6918 bits (143), Expect = 1.216e-8 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = -3 Query: 57 PNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 332 PNLQ NN +G IP+++ + L LDL N +G IP + +KL L L +N L G IP++L + L VLDLSNN L G++P + Sbjct: 484 PNLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPAD 575 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bpback to top |