g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0003109
Unique Nameg.arboreum_cottongen_reftransV1_0003109
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length871
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr5chromosomeg.arboreum_cottongen_reftransV1_0003109:1..871 .
Chr5:18795953..18800106 +		n/a
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: V4MLY9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10024694mg PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.404e-88
Identity = 156/197 (79.19%), Postives = 172/197 (87.31%), Query Frame = -3 
Query:   12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602
            M +RLI    WLI V DL  R AGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN LTG IP+TLG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN K
Sbjct:    1 MERRLIPGFFWLILVFDLVLRTAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLTGPIPSTLGRLQKLRFLRLNNNSLSGEIPRSLTAVSSLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 197
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: R0H4E8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006936mg PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.674e-88
Identity = 157/195 (80.51%), Postives = 173/195 (88.72%), Query Frame = -3 
Query:   18 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFAN 602
            M +RLI    WLI VLDL  RVAGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LG+LTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN
Sbjct:    1 MERRLIPGFFWLILVLDLVLRVAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGSLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVSTLQVLDLSNNRLTGDIPVNGSFSLFTPISFAN 195
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A067LPX8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02411 PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.269e-87
Identity = 158/190 (83.16%), Postives = 170/190 (89.47%), Query Frame = -3 
Query:    6 LWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 575
             WLIF+    F+VA NAEGDALNALKTN+ DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG L NLQYLELYSNNISG +PDELGNLT LVSLDLYLN+LTG IP TLG+L++LRFLRLNNN+L+ TIP SLTTI TLQVLDLSNN L GD+PVNGSFSLFTPISFANN L 
Sbjct:   10 FWLIFLFYFVFKVASNAEGDALNALKTNLADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLTNLQYLELYSNNISGKVPDELGNLTNLVSLDLYLNRLTGRIPPTLGRLQRLRFLRLNNNTLSETIPVSLTTITTLQVLDLSNNNLTGDIPVNGSFSLFTPISFANNPLK 199
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0B0MS45_GOSAR (Brassinosteroid insensitive 1-associated receptor kinase 1-like protein OS=Gossypium arboreum GN=F383_26504 PE=4 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 3.117e-87
Identity = 154/187 (82.35%), Postives = 166/187 (88.77%), Query Frame = -3 
Query:   36 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT 596
            +R +   LWLI VL+L FR AGNAEGDALNALKTNM DPNNVLQSWD TLVNPCTWFHVTCN+ENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP+ELGNLT LVSLDLYLN LTG IPTTLG+L KLRFLRLNNN+L G IPR LT I++LQVLDLSNN L GD+PVNGSFSLFT
Sbjct:    2 ERFVPLYLWLILVLELVFRAAGNAEGDALNALKTNMADPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNNITGTIPEELGNLTNLVSLDLYLNNLTGGIPTTLGKLTKLRFLRLNNNTLTGQIPRVLTAINSLQVLDLSNNRLEGDIPVNGSFSLFT 188
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A078GS15_BRANA (BnaC03g66580D protein OS=Brassica napus GN=BnaC03g66580D PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.097e-87
Identity = 150/186 (80.65%), Postives = 167/186 (89.78%), Query Frame = -3 
Query:   18 LWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFAN 575
            LWL+ V DL  RVAGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNSENSVTRVDLGNA+L+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP +LG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN
Sbjct:   26 LWLLLVFDLVLRVAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSENSVTRVDLGNADLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPKSLGRLQKLRFLRLNNNSLSGEIPRSLTAVLSLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 211
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TPQ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G141000 PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.877e-86
Identity = 153/197 (77.66%), Postives = 168/197 (85.28%), Query Frame = -3 
Query:   12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602
            M +RLIS CL LI VLDL FRV+GN EGDALNALK N+ DPNNVLQSW+ TLVNPCTW HVTCN ENSVTRVDLGN+NL+G LVPQLG LP LQ LELY NNISGTIP++LGNLT LVSLDLY N LTG IP+TLG+L+KLRFLRLNNN+L G IP  LTTI +LQVLDLSNN L GD+P NGSFSLFTP SFANN+
Sbjct:    1 MMERLISVCLRLILVLDLVFRVSGNKEGDALNALKNNLADPNNVLQSWNSTLVNPCTWLHVTCNCENSVTRVDLGNSNLSGHLVPQLGQLPALQNLELYGNNISGTIPEDLGNLTNLVSLDLYFNTLTGHIPSTLGKLQKLRFLRLNNNTLTGQIPMPLTTIMSLQVLDLSNNKLEGDIPANGSFSLFTPNSFANNR 197
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: D7M8R4_ARALL (Bri1-associated receptor kinase OS=Arabidopsis lyrata subsp. lyrata GN=BAK1 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.543e-86
Identity = 156/195 (80.00%), Postives = 173/195 (88.72%), Query Frame = -3 
Query:   12 LISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTP--ISFANNK 590
            +I +  WLI VLDL  RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNNGL GD+PVNGSFSLFTP  ISFAN K
Sbjct:    1 MIPYFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNGLTGDIPVNGSFSLFTPGLISFANTK 195
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A087GJA6_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G199700 PE=4 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.260e-86
Identity = 156/200 (78.00%), Postives = 174/200 (87.00%), Query Frame = -3 
Query:    6 MTQRL-ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 602
            M +RL I    WLI VLDL  RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+G IP++LGNL+ELVSLDLYLN L+G IP+TLG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN KL 
Sbjct:    1 MERRLMIPGFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSENSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGGIPEQLGNLSELVSLDLYLNNLSGPIPSTLGRLQKLRFLRLNNNSLSGEIPRSLTAVLSLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTKLK 200
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2S9D5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G062900 PE=4 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 8.207e-86
Identity = 148/197 (75.13%), Postives = 167/197 (84.77%), Query Frame = -3 
Query:    6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596
            +RLIS CLWLI  L L  RVAGNAEGDALNALK N+ DPNN+LQ WDPT +NPC W+++TCN ENSVTR+DLGNA L+G+LVP LG L NLQYLELYSNNISG IP+E+GNLT LVSLDLYLN LTG IP TLG+L+KLRFLRLNNNSL G IP +LTTIDT   LD+SNN L GD+PVNGSFSLF PISF+NN+LN
Sbjct:    2 ERLISVCLWLILALHLVLRVAGNAEGDALNALKNNLADPNNLLQDWDPTDINPCQWYNITCNGENSVTRIDLGNAKLSGKLVPDLGLLSNLQYLELYSNNISGEIPEEIGNLTNLVSLDLYLNVLTGHIPATLGKLRKLRFLRLNNNSLTGQIPMALTTIDT---LDVSNNQLEGDIPVNGSFSLFQPISFSNNRLN 195
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2V6I0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G141000 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.609e-85
Identity = 153/197 (77.66%), Postives = 168/197 (85.28%), Query Frame = -3 
Query:   12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602
            M +RLIS CL LI VLDL FRV+GN EGDALNALK N+ DPNNVLQSW+ TLVNPCTW HVTCN ENSVTRVDLGN+NL+G LVPQLG LP LQ LELY NNISGTIP++LGNLT LVSLDLY N LTG IP+TLG+L+KLRFLRLNNN+L G IP  LTTI +LQVLDLSNN L GD+P NGSFSLFTP SFANN+
Sbjct:    1 MMERLISVCLRLILVLDLVFRVSGNKEGDALNALKNNLADPNNVLQSWNSTLVNPCTWLHVTCNCENSVTRVDLGNSNLSGHLVPQLGQLPALQNLELYGNNISGTIPEDLGNLTNLVSLDLYFNTLTGHIPSTLGKLQKLRFLRLNNNTLTGQIPMPLTTIMSLQVLDLSNNKLEGDIPANGSFSLFTPNSFANNR 197
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 2.149e-89
Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = -3 
Query:   12 MTQRLISFCL-WLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602
            M +RL+  C  WLI VLDL  RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN K
Sbjct:    1 MERRLMIPCFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 198
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.152e-74
Identity = 138/175 (78.86%), Postives = 151/175 (86.29%), Query Frame = -3 
Query:   15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539
             + N EGDAL++L+ N+VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA+L+GQLVPQLG L NLQYLELYSNNI+G +P +LGNLT LVSLDLYLN  TG IP +LG+L KLRFLRLNNNSL G IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN
Sbjct:   27 ASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 201
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 3.491e-72
Identity = 135/175 (77.14%), Postives = 147/175 (84.00%), Query Frame = -3 
Query:   15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539
             + N EGDAL+ L+  +VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA L+G LVP+LG L NLQYLELYSNNI+G IP  LGNLT LVSLDLYLN  +G IP +LG+L KLRFLRLNNNSL G+IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN
Sbjct:   24 ASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 198
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.461e-70
Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = -3 
Query:    3 RVAGNAEGDALNALKTNMV--DP-NNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 542
            RVAGNAEGDAL  LK ++   DP NNVLQSWD TLV PCTWFHVTCN EN VTRVDLGNA L+G+LVP+LG L NLQYLELYSNNI+G IP+ELG+L ELVSLDLY N ++G IP++LG+L KLRFLRLNNNSL+G IP +LT++  LQVLD+SNN L GD+PVNGSFSLFTPISFANN L +
Sbjct:   26 RVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSVQ-LQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTD 207
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 1.714e-66
Identity = 125/192 (65.10%), Postives = 155/192 (80.73%), Query Frame = -3 
Query:    9 LWLIFVLDLAFRVAGNAEGDALNALKTNMV---DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKL 575
            +WLI  LD   RV G  + DAL AL++++      NN+LQSW+ T V PC+WFHVTCN+ENSVTR+DLG+ANL+G+LVPQL  LPNLQYLEL++NNI+G IP+ELG+L ELVSLDL+ N ++G IP++LG+L KLRFLRL NNSL+G IPRSLT +  L VLD+SNN L GD+PVNGSFS FT +SFANNKL
Sbjct:   10 IWLILFLDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKL 200
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.999e-26
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = -3 
Query:    6 ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT--PISFANNKLN 587
            ++    L+F   L   V+ +A+GDAL AL+ ++    N L  W+   VNPCTW  V C+ +N VT + L + N +G L  ++G L NL+ L L  N I+G IP++ GNLT L SLDL  N+LTG IP+T+G LKKL+FL L+ N L GTIP SLT +  L  L L +N L G +P     SLF     +F +N LN
Sbjct:    9 MAMAFTLLFFACLCSFVSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNFTSNNLN 200
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.490e-25
Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = -3 
Query:   63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N E  AL  +K+++ DP+ VL +WD T V+PC+W  +TC S+  V R++  + NL+G L   +G+L NLQ + L +N I+G IP E+G L +L +LDL  N  TG IP TL   K L++LR+NNNSL GTIP SL  +  L  LDLS N L G VP
Sbjct:   40 NFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.992e-25
Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = -3 
Query:   63 ISFCLW----LIFVLDLAFRVAG------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 587
            + F +W    L+FV       A       N E  AL A+K  + DP  VL++WD   V+PC+W  V+C ++  V+ +DL + +L+G L P++G+L  LQ + L +N I+G IP+ +G L +L SLDL  N  TG+IP +LG+LK L +LRLNNNSL GT P SL+ I+ L ++D+S N L G +P
Sbjct:    4 VRFVVWRLGFLVFVWFFDISSATLSPTGVNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.002e-25
Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = -3 
Query:   63 SFCLWLIFVLDLAFRVAG-------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 584
            SF  +L F+  L   V G       N E  AL  +K ++ DP+ VL +WD   V+PC+W  VTC+SEN V  +   + NL+G L P + +L NL+ + L +NNI G IP E+G LT L +LDL  N   G+IP ++G L+ L++LRLNNNSL+G  P SL+ +  L  LDLS N L G VP
Sbjct:   14 SFFCFLGFLCLLCSSVHGLLSPKGVNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.581e-25
Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = -3 
Query:   63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N E +AL +++ N+ DP+  L +WD   V+PC+W  +TC+ +N V  +   + +L+G L   +G+L NL+ + L +NNISG IP ELG L +L +LDL  N+ +GDIP ++ QL  L++LRLNNNSL+G  P SL+ I  L  LDLS N L G VP
Sbjct:   35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4MLY9_EUTSA2.404e-8879.19Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
R0H4E8_9BRAS2.674e-8880.51Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A067LPX8_JATCU1.269e-8783.16Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A0B0MS45_GOSAR3.117e-8782.35Brassinosteroid insensitive 1-associated receptor ... [more]
A0A078GS15_BRANA7.097e-8780.65BnaC03g66580D protein OS=Brassica napus GN=BnaC03g... [more]
A0A0D2TPQ6_GOSRA1.877e-8677.66Uncharacterized protein OS=Gossypium raimondii GN=... [more]
D7M8R4_ARALL2.543e-8680.00Bri1-associated receptor kinase OS=Arabidopsis lyr... [more]
A0A087GJA6_ARAAL5.260e-8678.00Uncharacterized protein OS=Arabis alpina GN=AALP_A... [more]
A0A0D2S9D5_GOSRA8.207e-8675.13Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2V6I0_GOSRA4.609e-8577.66Uncharacterized protein OS=Gossypium raimondii GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
BAK1_ARATH2.149e-8979.80BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH1.152e-7478.86Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH3.491e-7277.14Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK4_ARATH1.461e-7073.77Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH1.714e-6665.10Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH2.999e-2644.39Probable LRR receptor-like serine/threonine-protei... [more]
NIK2_ARATH1.490e-2548.08Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis th... [more]
NIK3_ARATH1.992e-2542.70Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis th... [more]
NIK1_ARATH2.002e-2544.75Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis th... [more]
Y4052_ARATH2.581e-2546.15Probable LRR receptor-like serine/threonine-protei... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bp
GGATTATTGAGTTTATTATTGGCAAAACTGATAGGAGTGAATAGTGAAAA
GGAACCATTAACTGGAACATCTCCTACTAGGCCATTGTTTGAAAGATCCA
GCACTTGCAGTGTGTCAATAGTAGTTAAGGACCTAGGAATTGTTCCTGCC
AATGAGTTGTTGTTGAGACGCAAGAAACGGAGTTTTTTAAGCTGGCCCAG
AGTAGTCGGGATGTCTCCAGTTAATTTATTCAAGTAAAGATCCAAGCTCA
CCAATTCCGTCAAATTCCCCAGCTCGTCTGGGATTGTCCCAGATATGTTA
TTACTATAAAGCTCCAAATACTGCAAATTTGGAAGTGACCCCAGCTGTGG
AACCAGTTGACCAGTGAGATTTGCATTCCCAAGATCAACTCTTGTTACAC
TATTTTCACTATTACATGTAACATGAAACCATGTGCAAGGATTAACAAGG
GTTGGGTCCCAACTTTGTAACACATTATTAGGGTCAACCATATTGGTCTT
CAATGCATTCAAAGCATCACCTTCGGCATTTCCTGCAACTCTGAAAGCCA
AATCCAACACGAAAATCAACCATAAACAAAAGGAAATCAATCGCTGCGTC
ATATTTTCCTTCATTTTTGCCTACTTTTGATTTCAAAGAGCTAAATCCCC
AAATTCATCATCAATCATCCACTTGACGAATCGCGGAAACATCAATTCAG
TCTAAAACGAACATCACAAATCACACACATATCGGCCGTTGACCGAATCA
ACGAGCAAATAATTCAAAAAAGAAAAGAAAACAGCACGATACACTTCGAA
AAAGACTCTTCTATAATCTAAATCCAAAAGAGAGAATAGAAAATGCTCAA
GATTCCAGCAAAATTCTTGAT
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