g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: V4MLY9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10024694mg PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 2.404e-88 Identity = 156/197 (79.19%), Postives = 172/197 (87.31%), Query Frame = -3 Query: 12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602 M +RLI WLI V DL R AGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN LTG IP+TLG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN K Sbjct: 1 MERRLIPGFFWLILVFDLVLRTAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLTGPIPSTLGRLQKLRFLRLNNNSLSGEIPRSLTAVSSLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 197
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: R0H4E8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006936mg PE=3 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 2.674e-88 Identity = 157/195 (80.51%), Postives = 173/195 (88.72%), Query Frame = -3 Query: 18 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFAN 602 M +RLI WLI VLDL RVAGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LG+LTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN Sbjct: 1 MERRLIPGFFWLILVLDLVLRVAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGSLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVSTLQVLDLSNNRLTGDIPVNGSFSLFTPISFAN 195
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A067LPX8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02411 PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.269e-87 Identity = 158/190 (83.16%), Postives = 170/190 (89.47%), Query Frame = -3 Query: 6 LWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 575 WLIF+ F+VA NAEGDALNALKTN+ DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG L NLQYLELYSNNISG +PDELGNLT LVSLDLYLN+LTG IP TLG+L++LRFLRLNNN+L+ TIP SLTTI TLQVLDLSNN L GD+PVNGSFSLFTPISFANN L Sbjct: 10 FWLIFLFYFVFKVASNAEGDALNALKTNLADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLTNLQYLELYSNNISGKVPDELGNLTNLVSLDLYLNRLTGRIPPTLGRLQRLRFLRLNNNTLSETIPVSLTTITTLQVLDLSNNNLTGDIPVNGSFSLFTPISFANNPLK 199
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0B0MS45_GOSAR (Brassinosteroid insensitive 1-associated receptor kinase 1-like protein OS=Gossypium arboreum GN=F383_26504 PE=4 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 3.117e-87 Identity = 154/187 (82.35%), Postives = 166/187 (88.77%), Query Frame = -3 Query: 36 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT 596 +R + LWLI VL+L FR AGNAEGDALNALKTNM DPNNVLQSWD TLVNPCTWFHVTCN+ENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP+ELGNLT LVSLDLYLN LTG IPTTLG+L KLRFLRLNNN+L G IPR LT I++LQVLDLSNN L GD+PVNGSFSLFT Sbjct: 2 ERFVPLYLWLILVLELVFRAAGNAEGDALNALKTNMADPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNNITGTIPEELGNLTNLVSLDLYLNNLTGGIPTTLGKLTKLRFLRLNNNTLTGQIPRVLTAINSLQVLDLSNNRLEGDIPVNGSFSLFT 188
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A078GS15_BRANA (BnaC03g66580D protein OS=Brassica napus GN=BnaC03g66580D PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.097e-87 Identity = 150/186 (80.65%), Postives = 167/186 (89.78%), Query Frame = -3 Query: 18 LWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFAN 575 LWL+ V DL RVAGNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNSENSVTRVDLGNA+L+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP +LG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN Sbjct: 26 LWLLLVFDLVLRVAGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSENSVTRVDLGNADLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPKSLGRLQKLRFLRLNNNSLSGEIPRSLTAVLSLQVLDLSNNPLTGDIPVNGSFSLFTPISFAN 211
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TPQ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G141000 PE=4 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.877e-86 Identity = 153/197 (77.66%), Postives = 168/197 (85.28%), Query Frame = -3 Query: 12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602 M +RLIS CL LI VLDL FRV+GN EGDALNALK N+ DPNNVLQSW+ TLVNPCTW HVTCN ENSVTRVDLGN+NL+G LVPQLG LP LQ LELY NNISGTIP++LGNLT LVSLDLY N LTG IP+TLG+L+KLRFLRLNNN+L G IP LTTI +LQVLDLSNN L GD+P NGSFSLFTP SFANN+ Sbjct: 1 MMERLISVCLRLILVLDLVFRVSGNKEGDALNALKNNLADPNNVLQSWNSTLVNPCTWLHVTCNCENSVTRVDLGNSNLSGHLVPQLGQLPALQNLELYGNNISGTIPEDLGNLTNLVSLDLYFNTLTGHIPSTLGKLQKLRFLRLNNNTLTGQIPMPLTTIMSLQVLDLSNNKLEGDIPANGSFSLFTPNSFANNR 197
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: D7M8R4_ARALL (Bri1-associated receptor kinase OS=Arabidopsis lyrata subsp. lyrata GN=BAK1 PE=3 SV=1) HSP 1 Score: 281.567 bits (719), Expect = 2.543e-86 Identity = 156/195 (80.00%), Postives = 173/195 (88.72%), Query Frame = -3 Query: 12 LISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTP--ISFANNK 590 +I + WLI VLDL RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNNGL GD+PVNGSFSLFTP ISFAN K Sbjct: 1 MIPYFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNGLTGDIPVNGSFSLFTPGLISFANTK 195
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A087GJA6_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA7G199700 PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.260e-86 Identity = 156/200 (78.00%), Postives = 174/200 (87.00%), Query Frame = -3 Query: 6 MTQRL-ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 602 M +RL I WLI VLDL RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+G IP++LGNL+ELVSLDLYLN L+G IP+TLG+L+KLRFLRLNNNSL+G IPRSLT + +LQVLDLSNN L GD+PVNGSFSLFTPISFAN KL Sbjct: 1 MERRLMIPGFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSENSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGGIPEQLGNLSELVSLDLYLNNLSGPIPSTLGRLQKLRFLRLNNNSLSGEIPRSLTAVLSLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTKLK 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2S9D5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G062900 PE=4 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 8.207e-86 Identity = 148/197 (75.13%), Postives = 167/197 (84.77%), Query Frame = -3 Query: 6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596 +RLIS CLWLI L L RVAGNAEGDALNALK N+ DPNN+LQ WDPT +NPC W+++TCN ENSVTR+DLGNA L+G+LVP LG L NLQYLELYSNNISG IP+E+GNLT LVSLDLYLN LTG IP TLG+L+KLRFLRLNNNSL G IP +LTTIDT LD+SNN L GD+PVNGSFSLF PISF+NN+LN Sbjct: 2 ERLISVCLWLILALHLVLRVAGNAEGDALNALKNNLADPNNLLQDWDPTDINPCQWYNITCNGENSVTRIDLGNAKLSGKLVPDLGLLSNLQYLELYSNNISGEIPEEIGNLTNLVSLDLYLNVLTGHIPATLGKLRKLRFLRLNNNSLTGQIPMALTTIDT---LDVSNNQLEGDIPVNGSFSLFQPISFSNNRLN 195
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2V6I0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G141000 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.609e-85 Identity = 153/197 (77.66%), Postives = 168/197 (85.28%), Query Frame = -3 Query: 12 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602 M +RLIS CL LI VLDL FRV+GN EGDALNALK N+ DPNNVLQSW+ TLVNPCTW HVTCN ENSVTRVDLGN+NL+G LVPQLG LP LQ LELY NNISGTIP++LGNLT LVSLDLY N LTG IP+TLG+L+KLRFLRLNNN+L G IP LTTI +LQVLDLSNN L GD+P NGSFSLFTP SFANN+ Sbjct: 1 MMERLISVCLRLILVLDLVFRVSGNKEGDALNALKNNLADPNNVLQSWNSTLVNPCTWLHVTCNCENSVTRVDLGNSNLSGHLVPQLGQLPALQNLELYGNNISGTIPEDLGNLTNLVSLDLYFNTLTGHIPSTLGKLQKLRFLRLNNNTLTGQIPMPLTTIMSLQVLDLSNNKLEGDIPANGSFSLFTPNSFANNR 197
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2) HSP 1 Score: 284.648 bits (727), Expect = 2.149e-89 Identity = 158/198 (79.80%), Postives = 175/198 (88.38%), Query Frame = -3 Query: 12 MTQRLISFCL-WLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 602 M +RL+ C WLI VLDL RV+GNAEGDAL+ALK ++ DPN VLQSWD TLV PCTWFHVTCNS+NSVTRVDLGNANL+GQLV QLG LPNLQYLELYSNNI+GTIP++LGNLTELVSLDLYLN L+G IP+TLG+LKKLRFLRLNNNSL+G IPRSLT + TLQVLDLSNN L GD+PVNGSFSLFTPISFAN K Sbjct: 1 MERRLMIPCFFWLILVLDLVLRVSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTK 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.152e-74 Identity = 138/175 (78.86%), Postives = 151/175 (86.29%), Query Frame = -3 Query: 15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539 + N EGDAL++L+ N+VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA+L+GQLVPQLG L NLQYLELYSNNI+G +P +LGNLT LVSLDLYLN TG IP +LG+L KLRFLRLNNNSL G IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN Sbjct: 27 ASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFTGPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 201
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 3.491e-72 Identity = 135/175 (77.14%), Postives = 147/175 (84.00%), Query Frame = -3 Query: 15 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANN 539 + N EGDAL+ L+ +VDPNNVLQSWDPTLVNPCTWFHVTCN+ENSV RVDLGNA L+G LVP+LG L NLQYLELYSNNI+G IP LGNLT LVSLDLYLN +G IP +LG+L KLRFLRLNNNSL G+IP SLT I TLQVLDLSNN L G VP NGSFSLFTPISFANN Sbjct: 24 ASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTCNNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLYLNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNGSFSLFTPISFANN 198
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 1.461e-70 Identity = 135/183 (73.77%), Postives = 155/183 (84.70%), Query Frame = -3 Query: 3 RVAGNAEGDALNALKTNMV--DP-NNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 542 RVAGNAEGDAL LK ++ DP NNVLQSWD TLV PCTWFHVTCN EN VTRVDLGNA L+G+LVP+LG L NLQYLELYSNNI+G IP+ELG+L ELVSLDLY N ++G IP++LG+L KLRFLRLNNNSL+G IP +LT++ LQVLD+SNN L GD+PVNGSFSLFTPISFANN L + Sbjct: 26 RVAGNAEGDALTQLKNSLSSGDPANNVLQSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSVQ-LQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTD 207
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 1.714e-66 Identity = 125/192 (65.10%), Postives = 155/192 (80.73%), Query Frame = -3 Query: 9 LWLIFVLDLAFRVAGNAEGDALNALKTNMV---DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKL 575 +WLI LD RV G + DAL AL++++ NN+LQSW+ T V PC+WFHVTCN+ENSVTR+DLG+ANL+G+LVPQL LPNLQYLEL++NNI+G IP+ELG+L ELVSLDL+ N ++G IP++LG+L KLRFLRL NNSL+G IPRSLT + L VLD+SNN L GD+PVNGSFS FT +SFANNKL Sbjct: 10 IWLILFLDFVSRVTGKTQVDALIALRSSLSSGDHTNNILQSWNATHVTPCSWFHVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIPVNGSFSQFTSMSFANNKL 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.999e-26 Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = -3 Query: 6 ISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFT--PISFANNKLN 587 ++ L+F L V+ +A+GDAL AL+ ++ N L W+ VNPCTW V C+ +N VT + L + N +G L ++G L NL+ L L N I+G IP++ GNLT L SLDL N+LTG IP+T+G LKKL+FL L+ N L GTIP SLT + L L L +N L G +P SLF +F +N LN Sbjct: 9 MAMAFTLLFFACLCSFVSPDAQGDALFALRISLRALPNQLSDWNQNQVNPCTWSQVICDDKNFVTSLTLSDMNFSGTLSSRVGILENLKTLTLKGNGITGEIPEDFGNLTSLTSLDLEDNQLTGRIPSTIGNLKKLQFLTLSRNKLNGTIPESLTGLPNLLNLLLDSNSLSGQIPQ----SLFEIPKYNFTSNNLN 200
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK2_ARATH (Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana GN=NIK2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.490e-25 Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N E AL +K+++ DP+ VL +WD T V+PC+W +TC S+ V R++ + NL+G L +G+L NLQ + L +N I+G IP E+G L +L +LDL N TG IP TL K L++LR+NNNSL GTIP SL + L LDLS N L G VP Sbjct: 40 NFEVVALIGIKSSLTDPHGVLMNWDDTAVDPCSWNMITC-SDGFVIRLEAPSQNLSGTLSSSIGNLTNLQTVLLQNNYITGNIPHEIGKLMKLKTLDLSTNNFTGQIPFTLSYSKNLQYLRVNNNSLTGTIPSSLANMTQLTFLDLSYNNLSGPVP 194
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK3_ARATH (Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana GN=NIK3 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.992e-25 Identity = 79/185 (42.70%), Postives = 115/185 (62.16%), Query Frame = -3 Query: 63 ISFCLW----LIFVLDLAFRVAG------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 587 + F +W L+FV A N E AL A+K + DP VL++WD V+PC+W V+C ++ V+ +DL + +L+G L P++G+L LQ + L +N I+G IP+ +G L +L SLDL N TG+IP +LG+LK L +LRLNNNSL GT P SL+ I+ L ++D+S N L G +P Sbjct: 4 VRFVVWRLGFLVFVWFFDISSATLSPTGVNYEVTALVAVKNELNDPYKVLENWDVNSVDPCSWRMVSC-TDGYVSSLDLPSQSLSGTLSPRIGNLTYLQSVVLQNNAITGPIPETIGRLEKLQSLDLSNNSFTGEIPASLGELKNLNYLRLNNNSLIGTCPESLSKIEGLTLVDISYNNLSGSLP 187
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: NIK1_ARATH (Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana GN=NIK1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.002e-25 Identity = 81/181 (44.75%), Postives = 110/181 (60.77%), Query Frame = -3 Query: 63 SFCLWLIFVLDLAFRVAG-------NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 584 SF +L F+ L V G N E AL +K ++ DP+ VL +WD V+PC+W VTC+SEN V + + NL+G L P + +L NL+ + L +NNI G IP E+G LT L +LDL N G+IP ++G L+ L++LRLNNNSL+G P SL+ + L LDLS N L G VP Sbjct: 14 SFFCFLGFLCLLCSSVHGLLSPKGVNFEVQALMDIKASLHDPHGVLDNWDRDAVDPCSWTMVTCSSENFVIGLGTPSQNLSGTLSPSITNLTNLRIVLLQNNNIKGKIPAEIGRLTRLETLDLSDNFFHGEIPFSVGYLQSLQYLRLNNNSLSGVFPLSLSNMTQLAFLDLSYNNLSGPVP 194
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y4052_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana GN=At4g30520 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.581e-25 Identity = 72/156 (46.15%), Postives = 103/156 (66.03%), Query Frame = -3 Query: 63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530 N E +AL +++ N+ DP+ L +WD V+PC+W +TC+ +N V + + +L+G L +G+L NL+ + L +NNISG IP ELG L +L +LDL N+ +GDIP ++ QL L++LRLNNNSL+G P SL+ I L LDLS N L G VP Sbjct: 35 NPEVEALISIRNNLHDPHGALNNWDEFSVDPCSWAMITCSPDNLVIGLGAPSQSLSGGLSESIGNLTNLRQVSLQNNNISGKIPPELGFLPKLQTLDLSNNRFSGDIPVSIDQLSSLQYLRLNNNSLSGPFPASLSQIPHLSFLDLSYNNLSGPVP 190 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bpback to top |