g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0003109
Unique Name	g.arboreum_cottongen_reftransV1_0003109
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	871

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr5	chromosome	g.arboreum_cottongen_reftransV1_0003109:1..871 . Chr5:18795953..18800106 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F6MF11_GOSHI (Somatic embryogenesis receptor-like kinase 3 protein OS=Gossypium hirsutum GN=serk3 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 1.492e-123
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = -3

Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMTQRLISFCLWLIFV DLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTQRLISFCLWLIFVFDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2NGT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G218200 PE=4 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 9.093e-120
Identity = 199/204 (97.55%), Postives = 200/204 (98.04%), Query Frame = -3

Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 204

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: F5BZU9_GOSHI (Somatic embryogenesis receptor-like kinase 2 protein OS=Gossypium hirsutum GN=SERK2 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 1.476e-119
Identity = 198/204 (97.06%), Postives = 200/204 (98.04%), Query Frame = -3

Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMT+RLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNM DPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISG IPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSL GTIP SLTTIDTLQVLDLSNNGL+GDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTRRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMADPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGMIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLVGTIPLSLTTIDTLQVLDLSNNGLIGDVPVNGSFSLFTPISFANNKLNN 204

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A061E3D3_THECC (BRI1-associated receptor kinase OS=Theobroma cacao GN=TCM_007534 PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 1.217e-97
Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = -3

Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS  LWLI VLDLAFRVAGNAEGDALNALKTN+ DPNNVLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLV QLG L NLQYLELYSNNI+G IP+ELGNLT LVSLDLYLN L G IPTTLG+L +LRFLRLNNNSL+G IP SLTT+++LQVLDLSNN LVGDVPVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVTLWLILVLDLAFRVAGNAEGDALNALKTNLADPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNITGIIPEELGNLTNLVSLDLYLNGLNGHIPTTLGKLTRLRFLRLNNNSLSGQIPMSLTTVNSLQVLDLSNNLLVGDVPVNGSFSLFTPISFANNRLNN 200

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2VZD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.361e-96
Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3

Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2V5B9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G140900 PE=4 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 1.826e-96
Identity = 168/200 (84.00%), Postives = 181/200 (90.50%), Query Frame = -3

Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FRV+GNAEGDALNALK NM DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRVSGNAEGDALNALKNNMADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0A1DZF0_GOSHI (Somatic embryogenesis receptor-like kinase 4 protein OS=Gossypium hirsutum GN=SERK4 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.273e-96
Identity = 166/200 (83.00%), Postives = 181/200 (90.50%), Query Frame = -3

Query:    3 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 602
            M +RLIS CL LI VLDL FR++GNAEGDALNALK N+ DPN+VLQSWD TLVNPCTWFHVTCNSENSVTRVDLGNANL+GQLVPQLG LPNLQYLELYSNNISG IP++LGNLT LVSLDLYLN LTG IP+TLG+L+KLRFLRLNNN+LAG IP  LTTI +LQVLDLSNN L GD+PVNGSFSLFTPISFANN+LNN
Sbjct:    1 MMERLISVCLQLILVLDLVFRISGNAEGDALNALKNNLADPNSVLQSWDSTLVNPCTWFHVTCNSENSVTRVDLGNANLSGQLVPQLGQLPNLQYLELYSNNISGIIPEDLGNLTNLVSLDLYLNTLTGHIPSTLGKLQKLRFLRLNNNTLAGQIPMPLTTIMSLQVLDLSNNKLEGDIPVNGSFSLFTPISFANNRLNN 200

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW42_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G063200 PE=4 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 6.999e-92
Identity = 160/197 (81.22%), Postives = 172/197 (87.31%), Query Frame = -3

Query:    6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596
            +R +  CLWLI VL+L FR AGNAEGDALNALKTNM DPNNVLQSWD TLVNPCTWFHVTCN+ENSVTRVDLGNANL+GQLV QLG LPNLQYLELYSN I+GTIP+ELGNLT LVSLDLYLN LTG IPTTLG+L KLRFLRLNNN+L G IPR LT I++LQVLDLSNN L GD+PV GSFSLFTPISF NN L 
Sbjct:    2 ERFVPLCLWLILVLELVFRAAGNAEGDALNALKTNMADPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVAQLGQLPNLQYLELYSNKITGTIPEELGNLTNLVSLDLYLNNLTGGIPTTLGKLTKLRFLRLNNNTLTGQIPRVLTAINSLQVLDLSNNRLEGDIPVTGSFSLFTPISFNNNLLR 198

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0D2TW39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G062900 PE=4 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 5.638e-90
Identity = 151/197 (76.65%), Postives = 170/197 (86.29%), Query Frame = -3

Query:    6 QRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLN 596
            +RLIS CLWLI  L L  RVAGNAEGDALNALK N+ DPNN+LQ WDPT +NPC W+++TCN ENSVTR+DLGNA L+G+LVP LG L NLQYLELYSNNISG IP+E+GNLT LVSLDLYLN LTG IP TLG+L+KLRFLRLNNNSL G IP +LTTIDTLQVLD+SNN L GD+PVNGSFSLF PISF+NN+LN
Sbjct:    2 ERLISVCLWLILALHLVLRVAGNAEGDALNALKNNLADPNNLLQDWDPTDINPCQWYNITCNGENSVTRIDLGNAKLSGKLVPDLGLLSNLQYLELYSNNISGEIPEEIGNLTNLVSLDLYLNVLTGHIPATLGKLRKLRFLRLNNNSLTGQIPMALTTIDTLQVLDVSNNQLEGDIPVNGSFSLFQPISFSNNRLN 198

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Match: A0A0B0PZP1_GOSAR (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Gossypium arboreum GN=F383_15318 PE=4 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.950e-89
Identity = 181/273 (66.30%), Postives = 192/273 (70.33%), Query Frame = -3

Query:    3 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY--------------------------------LELYS-NNISGTIP-----------DELGNLTELVSL-DLYLNKLTG------------------------DIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 614
            MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQY                                LE++    +SG +P             LG +  ++ + +LY N ++G                        DIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN
Sbjct:    1 MKENMTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLMPDLNSKFQVLLKGTRCTLDLRTPIQGARTLLEIFEVTTLSGAVPLCLVLRPDNNASTLGKVDMVLHVPELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQLKKLRFLRLNNNSLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNKLNN 273

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.048e-18
Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = -3

Query:   63 NAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSE-NSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N +G  L  +K ++ DP++ L SW+    +PC W  V+C  + +SVT VDL +ANL G     +  L NL +L LY+N+I+ T+P  +     L +LDL  N LTG++P TL  +  L  L L  N+ +G IP S    + L+VL L  N L G +P
Sbjct:   17 NQDGFILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFSGDIPASFGKFENLEVLSLVYNLLDGTIP 173

HSP 2 Score: 66.6254 bits (161), Expect = 5.948e-11
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = -3

Query:   63 QLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 359
            ++ P+ G+L NL+ + L   ++ G IPD LG L++LV LDL LN L G IP +LG L  +  + L NNSL G IP  L  + +L++LD S N L G +P
Sbjct:  196 RIPPEFGNLTNLEVMWLTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIP 294

HSP 3 Score: 64.6994 bits (156), Expect = 2.214e-10
Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = -3

Query:   12 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP--------------VNGSFSLFTPISFANNK 398
            V +++L N +LTG++ P+LG+L +L+ L+   N ++G IPDEL  +  L SL+LY N L G++P ++     L  +R+  N L G +P+ L     L+ LD+S N   GD+P              ++ SFS   P S A+ +
Sbjct:  255 VVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRVP-LESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLPKDLGLNSPLRWLDVSENEFSGDLPADLCAKGELEELLIIHNSFSGVIPESLADCR 396

HSP 4 Score: 61.6178 bits (148), Expect = 2.559e-9
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3

Query:   57 LGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 383
            L N   TG L  ++GSL NL  L    N  SG++PD L +L EL +LDL+ N+ +G++ + +   KKL  L L +N   G IP  + ++  L  LDLS N   G +PV+
Sbjct:  451 LSNNEFTGSLPEEIGSLDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNLADNEFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVS 559

HSP 5 Score: 60.8474 bits (146), Expect = 5.489e-9
Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = -3

Query:   45 LGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFS 383
            L   +L GQ+   LG L  L  L+L  N++ G IP  LG LT +V ++LY N LTG+IP  LG LK LR L  + N L G IP  L  +  L+ L+L  N L G++P + + S
Sbjct:  212 LTECHLVGQIPDSLGQLSKLVDLDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCRV-PLESLNLYENNLEGELPASIALS 323

HSP 6 Score: 58.9214 bits (141), Expect = 1.908e-8
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = -3

Query:   63 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 389
            +DL   +L G + P LG L N+  +ELY+N+++G IP ELGNL  L  LD  +N+LTG IP  L +   L  L L  N+L G +P S+     L  + +  N L G +P
Sbjct:  234 LDLALNDLVGHIPPSLGGLTNVVQIELYNNSLTGEIPPELGNLKSLRLLDASMNQLTGKIPDELCR-VPLESLNLYENNLEGELPASIALSPNLYEIRIFGNRLTGGLP 341

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y5524_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana GN=At5g65240 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.639e-18
Identity = 70/160 (43.75%), Postives = 97/160 (60.62%), Query Frame = -3

Query:   63 VAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLT-GQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 539
            V+ +A+GDAL AL++++      L  W+   V+PCTW  V C+ +  VT V L   N + G L   +G L  L+ L L  N I G IP+ +GNL+ L SLDL  N LT  IP+TLG LK L+FL L+ N+L G+IP SLT +  L  + L +N L G++P
Sbjct:   18 VSPDAQGDALFALRSSLRASPEQLSDWNQNQVDPCTWSQVICDDKKHVTSVTLSYMNFSSGTLSSGIGILTTLKTLTLKGNGIMGGIPESIGNLSSLTSLDLEDNHLTDRIPSTLGNLKNLQFLTLSRNNLNGSIPDSLTGLSKLINILLDSNNLSGEIP 177

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y1668_ARATH (Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana GN=At1g66830 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.975e-18
Identity = 67/183 (36.61%), Postives = 99/183 (54.10%), Query Frame = -3

Query:   63 MTQRLISFCLWLIFVLDLAFRVAG--NAEGDALNALKTNMVD-PNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 602
            M+Q  +  C    F+L   F +A   N +G AL + K ++ +  ++V  +W+ +  NPC+W  VTCN +  V  + L N  L+G L P +GSL +L+++ L  N+  G +P EL  L  L SL L  N  +G +P  +G LK L  L L+ NS  G+I  SL     L+ L LS N   GD+P
Sbjct:    1 MSQLFLILC----FILTHFFAIATSLNDQGLALLSFKQSIQNQSDSVFTNWNSSDSNPCSWQGVTCNYDMRVVSIRLPNKRLSGSLDPSIGSLLSLRHINLRDNDFQGKLPVELFGLKGLQSLVLSGNSFSGFVPEEIGSLKSLMTLDLSENSFNGSISLSLIPCKKLKTLVLSKNSFSGDLP 179

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: Y1723_ARATH (Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.810e-18
Identity = 62/180 (34.44%), Postives = 87/180 (48.33%), Query Frame = -3

Query:   63 MTQRLISFCLWLIFVLDLAFRVAGNAEGDALNALKTNMVDPNNVLQSWDPTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 602
            M  R+    + ++         + N EG  L   K  + D N  L SW+    NPC W  + C    +VT VDL   NL+G L P +  L  L+ L + +N ISG IP +L     L  LDL  N+  G IP  L  +  L+ L L  N L G+IPR +  + +LQ L + +N L G +P
Sbjct:    1 MRGRICFLAIVILCSFSFILVRSLNEEGRVLLEFKAFLNDSNGYLASWNQLDSNPCNWTGIACTHLRTVTSVDLNGMNLSGTLSPLICKLHGLRKLNVSTNFISGPIPQDLSLCRSLEVLDLCTNRFHGVIPIQLTMIITLKKLYLCENYLFGSIPRQIGNLSSLQELVIYSNNLTGVIP 180

HSP 2 Score: 73.9442 bits (180), Expect = 1.985e-13
Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = -3

Query:    6 NLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 371
             L+G++ P +G++  L+ L L+ N  +G+IP E+G LT++  L LY N+LTG+IP  +G L     +  + N L G IP+    I  L++L L  N L+G +P   G  +L   +  + N+LN
Sbjct:  246 RLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLN 368

HSP 3 Score: 72.4034 bits (176), Expect = 6.289e-13
Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = -3

Query:   63 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 398
            +T ++L    L+G +   LG L NL+ L L +NN +G IP E+GNLT++V  ++  N+LTG IP  LG    ++ L L+ N  +G I + L  +  L++L LS+N L G++P
Sbjct:  477 LTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIP 588

HSP 4 Score: 67.3958 bits (163), Expect = 2.846e-11
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = -3

Query:   48 LTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSF 368
             TG +  ++G L  ++ L LY+N ++G IP E+GNL +   +D   N+LTG IP   G +  L+ L L  N L G IPR L  +  L+ LDLS N L G +P    F
Sbjct:  271 FTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQF 377

HSP 5 Score: 65.0846 bits (157), Expect = 1.745e-10
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = -3

Query:    9 TCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKL 419
            TC S   +T++ LG+  LTG L  +L +L NL  LEL+ N +SG I  +LG L  L  L L  N  TG+IP  +G L K+    +++N L G IP+ L +  T+Q LDLS N   G +    G       +  ++N+L
Sbjct:  449 TCKS---LTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLGKLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRL 583

HSP 6 Score: 65.0846 bits (157), Expect = 1.879e-10
Identity = 50/132 (37.88%), Postives = 68/132 (51.52%), Query Frame = -3

Query:    6 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 398
               +D     LTG +  + G + NL+ L L+ N + G IP ELG LT L  LDL +N+L G IP  L  L  L  L+L +N L G IP  +       VLD+S N L G +P +   F     +S  +NKL+
Sbjct:  309 AAEIDFSENQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQFLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLS 440

HSP 7 Score: 63.5438 bits (153), Expect = 6.983e-10
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = -3

Query:   12 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTEL-VSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVNGSFSLFTPISFANNK 389
            + L +  LTG++    G L  L  L+L  N +S  IP ELG LT L +SL++  N L+G IP +LG L+ L  L LN+N L+G IP S+  + +L + ++SNN LVG VP    F      +FA N 
Sbjct:  576 LRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDTAVFQRMDSSNFAGNH 702

HSP 8 Score: 63.1586 bits (152), Expect = 9.212e-10
Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = -3

Query:   60 VTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPV 398
            + R+ L N N TG++ P++G+L  +    + SN ++G IP ELG+   +  LDL  NK +G I   LGQL  L  LRL++N L G IP S   +  L  L L  N L  ++PV
Sbjct:  501 LERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPV 613

HSP 9 Score: 59.3066 bits (142), Expect = 1.520e-8
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = -3

Query:   63 LTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 368
            L G L  QL  L NL  L L+ N +SG IP  +GN++ L  L L+ N  TG IP  +G+L K++ L L  N L G IPR +  +     +D S N L G +P
Sbjct:  223 LEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQLTGFIP 324

HSP 10 Score: 55.0694 bits (131), Expect = 4.210e-7
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = -3

Query:    9 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKL 389
            +  G    +G +  ++    +L+ L L  N + G++P +L  L  L  L L+ N+L+G+IP ++G + +L  L L+ N   G+IPR +  +  ++ L L  N L G++P   G+      I F+ N+L
Sbjct:  192 IRAGRNGFSGVIPSEISGCESLKVLGLAENLLEGSLPKQLEKLQNLTDLILWQNRLSGEIPPSVGNISRLEVLALHENYFTGSIPREIGKLTKMKRLYLYTNQLTGEIPREIGNLIDAAEIDFSENQL 319

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Match: PXL1_ARATH (Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana GN=PXL1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.664e-17
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = -3

Query:   63 NAEGDALNALKTNMVDPNNVLQSWD--------PTLVNPCTWFHVTCNSENSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 530
            N+E + L A K+++ DP+N LQ W           LV+ C W  V C++   V ++ L N NL+G +  Q+ S P+LQ L+L +N    ++P  L NLT L  +D+ +N   G  P  LG    L  +  ++N+ +G +P  L    TL+VLD       G VP
Sbjct:   28 NSEQEILLAFKSDLFDPSNNLQDWKRPENATTFSELVH-CHWTGVHCDANGYVAKLLLSNMNLSGNVSDQIQSFPSLQALDLSNNAFESSLPKSLSNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDFRGGYFEGSVP 190

HSP 2 Score: 79.7221 bits (195), Expect = 3.282e-15
Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = -3

Query:    6 VDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN-GSFSLFTPISFANNKLN 389
            +DL   NLTGQ+   LG L  L  + LY N ++G +P ELG +T LV LDL  N++TG+IP  +G+LK L+ L L  N L G IP  +  +  L+VL+L  N L+G +PV+ G  S    +  ++NKL+
Sbjct:  250 LDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSNKLS 378

HSP 3 Score: 70.4774 bits (171), Expect = 2.750e-12
Identity = 44/114 (38.60%), Postives = 67/114 (58.77%), Query Frame = -3

Query:   63 NSVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 404
            +S+  + LG     G++  + G L  LQYL+L   N++G IP  LG L +L ++ LY N+LTG +P  LG +  L FL L++N + G IP  +  +  LQ+L+L  N L G +P
Sbjct:  221 SSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIP 334

HSP 4 Score: 69.707 bits (169), Expect = 4.952e-12
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = -3

Query:   57 NLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 371
            N  G++   +G L +L+ + L  N   G IP+E G LT L  LDL +  LTG IP++LGQLK+L  + L  N L G +PR L  + +L  LDLS+N + G++P+ 
Sbjct:  208 NFGGKVPKVIGELSSLETIILGYNGFMGEIPEEFGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDLSDNQITGEIPME 312

HSP 5 Score: 60.8474 bits (146), Expect = 4.950e-9
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = -3

Query:   63 SVTRVDLGNANLTGQLVPQLGSLPNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVP 401
            S+  +DL +  +TG++  ++G L NLQ L L  N ++G IP ++  L  L  L+L+ N L G +P  LG+   L++L +++N L+G IP  L     L  L L NN   G +P
Sbjct:  294 SLVFLDLSDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIP 406

HSP 6 Score: 59.6918 bits (143), Expect = 1.216e-8
Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = -3

Query:   57 PNLQYLELYSNNISGTIPDELGNLTELVSLDLYLNKLTGDIPTTLGQXXXXXXXXXXXXXLAGTIPRSLTTIDTLQVLDLSNNGLVGDVPVN 332
            PNLQ      NN +G IP+++ +   L  LDL  N  +G IP  +   +KL  L L +N L G IP++L  +  L VLDLSNN L G++P +
Sbjct:  484 PNLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLKSNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPAD 575

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
F6MF11_GOSHI	1.492e-123	99.51	Somatic embryogenesis receptor-like kinase 3 prote...	[more]
A0A0D2NGT4_GOSRA	9.093e-120	97.55	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
F5BZU9_GOSHI	1.476e-119	97.06	Somatic embryogenesis receptor-like kinase 2 prote...	[more]
A0A061E3D3_THECC	1.217e-97	85.00	BRI1-associated receptor kinase OS=Theobroma cacao...	[more]
A0A0D2VZD5_GOSRA	1.361e-96	84.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2V5B9_GOSRA	1.826e-96	84.00	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0A1DZF0_GOSHI	8.273e-96	83.00	Somatic embryogenesis receptor-like kinase 4 prote...	[more]
A0A0D2TW42_GOSRA	6.999e-92	81.22	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2TW39_GOSRA	5.638e-90	76.65	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0PZP1_GOSAR	1.950e-89	66.30	BRASSINOSTEROID INSENSITIVE 1-associated receptor ...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0003109 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
HSL1_ARATH	1.048e-18	38.85	Receptor-like protein kinase HSL1 OS=Arabidopsis t...	[more]
Y5524_ARATH	1.639e-18	43.75	Probable LRR receptor-like serine/threonine-protei...	[more]
Y1668_ARATH	4.975e-18	36.61	Probable inactive leucine-rich repeat receptor-lik...	[more]
Y1723_ARATH	5.810e-18	34.44	Leucine-rich repeat receptor-like serine/threonine...	[more]
PXL1_ARATH	1.664e-17	34.15	Leucine-rich repeat receptor-like protein kinase P...	[more]

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Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0003109 ID=g.arboreum_cottongen_reftransV1_0003109; Name=g.arboreum_cottongen_reftransV1_0003109; organism=Gossypium arboreum; type=contig; length=871bp
GGATTATTGAGTTTATTATTGGCAAAACTGATAGGAGTGAATAGTGAAAA
GGAACCATTAACTGGAACATCTCCTACTAGGCCATTGTTTGAAAGATCCA
GCACTTGCAGTGTGTCAATAGTAGTTAAGGACCTAGGAATTGTTCCTGCC
AATGAGTTGTTGTTGAGACGCAAGAAACGGAGTTTTTTAAGCTGGCCCAG
AGTAGTCGGGATGTCTCCAGTTAATTTATTCAAGTAAAGATCCAAGCTCA
CCAATTCCGTCAAATTCCCCAGCTCGTCTGGGATTGTCCCAGATATGTTA
TTACTATAAAGCTCCAAATACTGCAAATTTGGAAGTGACCCCAGCTGTGG
AACCAGTTGACCAGTGAGATTTGCATTCCCAAGATCAACTCTTGTTACAC
TATTTTCACTATTACATGTAACATGAAACCATGTGCAAGGATTAACAAGG
GTTGGGTCCCAACTTTGTAACACATTATTAGGGTCAACCATATTGGTCTT
CAATGCATTCAAAGCATCACCTTCGGCATTTCCTGCAACTCTGAAAGCCA
AATCCAACACGAAAATCAACCATAAACAAAAGGAAATCAATCGCTGCGTC
ATATTTTCCTTCATTTTTGCCTACTTTTGATTTCAAAGAGCTAAATCCCC
AAATTCATCATCAATCATCCACTTGACGAATCGCGGAAACATCAATTCAG
TCTAAAACGAACATCACAAATCACACACATATCGGCCGTTGACCGAATCA
ACGAGCAAATAATTCAAAAAAGAAAAGAAAACAGCACGATACACTTCGAA
AAAGACTCTTCTATAATCTAAATCCAAAAGAGAGAATAGAAAATGCTCAA
GATTCCAGCAAAATTCTTGAT

Search form

g.arboreum_cottongen_reftransV1_0003109, g.arboreum_cottongen_reftransV1_0003109 (contig) Gossypium arboreum

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