g.arboreum_cottongen_reftransV1_0011072, g.arboreum_cottongen_reftransV1_0011072 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0011072
Unique Name	g.arboreum_cottongen_reftransV1_0011072
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	686

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr1	chromosome	g.arboreum_cottongen_reftransV1_0011072:1..686 . Chr1:66340529..66341583 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A0B0NAV0_GOSAR (65-kDa microtubule-associated 3-like protein OS=Gossypium arboreum GN=F383_15426 PE=4 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 5.898e-129
Identity = 194/228 (85.09%), Postives = 212/228 (92.98%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELHRQL+EL+ EK+DRLKQV+D+L+MLN LC VMG+DFK TV E+HP+LGD +GF SISNNTIEQLATLIKKL+EVKI+RMQRLQDL TTML+LW LMDTPIEEQQMFQNVTCN+AASEHEI EP TLSVDFIKYVEAEVSRLEELKSSKMKELVL KRLELEEICRKTHLVPDS+ A+EDAI AIESG V AATILEQIELQIAKVKEEAFSR+EILE+VEK
Sbjct:  160 LRKLEELHRQLHELQTEKSDRLKQVQDYLSMLNELCSVMGMDFKQTVDEIHPTLGDPKGFRSISNNTIEQLATLIKKLREVKIQRMQRLQDLATTMLELWNLMDTPIEEQQMFQNVTCNVAASEHEITEPNTLSVDFIKYVEAEVSRLEELKSSKMKELVLKKRLELEEICRKTHLVPDSECAIEDAIVAIESGLVDAATILEQIELQIAKVKEEAFSRKEILEKVEK 387

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BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A0D2NMP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G065100 PE=4 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 9.297e-128
Identity = 193/228 (84.65%), Postives = 211/228 (92.54%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELHRQL+EL+ EK+DRLKQV+D+L+MLN LC VMG+DFK TV E+HP+L D +GF SIS+NTIEQLATLIKKL+EVKI+RMQRLQDL TTML+LW LMDTPIEEQQMFQNVTCN+AASEHEI EP TLSVDFIKYVEAEVSRLEELKSSKMKELVL KRLELEEICRKTHLVPDS+ A+EDAI AIESG V AATILEQIELQIAKVKEEAFSRREILE+VEK
Sbjct:  160 LRKLEELHRQLHELQTEKSDRLKQVQDYLSMLNELCSVMGMDFKQTVDEIHPTLSDPKGFRSISSNTIEQLATLIKKLREVKIQRMQRLQDLATTMLELWNLMDTPIEEQQMFQNVTCNVAASEHEITEPNTLSVDFIKYVEAEVSRLEELKSSKMKELVLKKRLELEEICRKTHLVPDSECAIEDAIVAIESGLVDAATILEQIELQIAKVKEEAFSRREILEKVEK 387

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BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: D7T1Y3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g01820 PE=4 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 6.997e-115
Identity = 174/228 (76.32%), Postives = 203/228 (89.04%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELH+QL  L+KEK+DRLKQV DHL+ LNSLCLV+G+DF+ TV EVHPSLGDS+G  +ISN TIEQLA  IK L+ VKI+RMQRLQDL ++ML+LW LMDTPIEEQQ+FQNVTCNIAASEHEI EP TLSVDFI YVEAEVSRLEELK+SKMKELVL KR ELEEICRKTH++P++ SA++  IEA+ESGAV A+ +LEQIELQ+AKVKEEAFSR+EILE+V+K
Sbjct:  160 LRKLEELHKQLQALQKEKSDRLKQVLDHLSTLNSLCLVLGMDFQQTVNEVHPSLGDSDGRKNISNATIEQLAAAIKTLRGVKIQRMQRLQDLASSMLELWNLMDTPIEEQQLFQNVTCNIAASEHEINEPNTLSVDFINYVEAEVSRLEELKASKMKELVLKKRSELEEICRKTHMIPEADSALDYVIEAMESGAVDASCVLEQIELQVAKVKEEAFSRKEILEKVDK 387

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A0D2QDA0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G196000 PE=4 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.267e-114
Identity = 178/228 (78.07%), Postives = 201/228 (88.16%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L +LEELHRQL+EL KEK++RLKQV+DHL  LNSLC VMG+DFKLT TEVHPSLGDSEG  SISNNT+EQL T I KL+EVKI+RM+RLQDL TTML+LW LMDTPIEEQQ FQNVTCN+AASEHEI EP TLS DFI YVE EVSRLE+LKSSKMKE++L KR EL+EI  KTHL+PD+Q  +EDAIEAI+SG + AATILEQIELQIAKVKEEAFSR+EILE+VEK
Sbjct:  196 LMRLEELHRQLHELLKEKSNRLKQVQDHLNTLNSLCSVMGMDFKLTATEVHPSLGDSEGSRSISNNTLEQLGTEINKLREVKIQRMERLQDLATTMLELWNLMDTPIEEQQKFQNVTCNVAASEHEITEPNTLSDDFINYVEEEVSRLEDLKSSKMKEIILKKRAELKEISTKTHLIPDTQ--LEDAIEAIDSGVIDAATILEQIELQIAKVKEEAFSRKEILEKVEK 421

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A0D2RZ78_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G196000 PE=4 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.392e-114
Identity = 178/228 (78.07%), Postives = 201/228 (88.16%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L +LEELHRQL+EL KEK++RLKQV+DHL  LNSLC VMG+DFKLT TEVHPSLGDSEG  SISNNT+EQL T I KL+EVKI+RM+RLQDL TTML+LW LMDTPIEEQQ FQNVTCN+AASEHEI EP TLS DFI YVE EVSRLE+LKSSKMKE++L KR EL+EI  KTHL+PD+Q  +EDAIEAI+SG + AATILEQIELQIAKVKEEAFSR+EILE+VEK
Sbjct:  196 LMRLEELHRQLHELLKEKSNRLKQVQDHLNTLNSLCSVMGMDFKLTATEVHPSLGDSEGSRSISNNTLEQLGTEINKLREVKIQRMERLQDLATTMLELWNLMDTPIEEQQKFQNVTCNVAASEHEITEPNTLSDDFINYVEEEVSRLEDLKSSKMKEIILKKRAELKEISTKTHLIPDTQ--LEDAIEAIDSGVIDAATILEQIELQIAKVKEEAFSRKEILEKVEK 421

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A0D2T109_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G196000 PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 3.381e-114
Identity = 178/228 (78.07%), Postives = 201/228 (88.16%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L +LEELHRQL+EL KEK++RLKQV+DHL  LNSLC VMG+DFKLT TEVHPSLGDSEG  SISNNT+EQL T I KL+EVKI+RM+RLQDL TTML+LW LMDTPIEEQQ FQNVTCN+AASEHEI EP TLS DFI YVE EVSRLE+LKSSKMKE++L KR EL+EI  KTHL+PD+Q  +EDAIEAI+SG + AATILEQIELQIAKVKEEAFSR+EILE+VEK
Sbjct:  196 LMRLEELHRQLHELLKEKSNRLKQVQDHLNTLNSLCSVMGMDFKLTATEVHPSLGDSEGSRSISNNTLEQLGTEINKLREVKIQRMERLQDLATTMLELWNLMDTPIEEQQKFQNVTCNVAASEHEITEPNTLSDDFINYVEEEVSRLEDLKSSKMKEIILKKRAELKEISTKTHLIPDTQ--LEDAIEAIDSGVIDAATILEQIELQIAKVKEEAFSRKEILEKVEK 421

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: M5X644_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002178mg PE=4 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 8.431e-113
Identity = 171/228 (75.00%), Postives = 202/228 (88.60%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LR+LEELHRQL+ L+ EK+DRLKQ++DHL  LNSLCLV+G+DFK T +EVHPSL DSEG  +ISN+TIE+LA  I+KL+EVK++RMQRLQDL +TML+LW LMDTPIEEQQMFQN+TCNIAASEHEI EP TLSVDFI YVEAEVSRLEELKSSKMKELVL KR ELEEICRKTH+V ++ SA++  IEAI+SG V  A +L+QIELQ+AKVKEEAFSR+EILE+V+K
Sbjct:  160 LRRLEELHRQLHALQTEKSDRLKQIQDHLCTLNSLCLVLGMDFKQTSSEVHPSLDDSEGCKNISNDTIERLAAAIQKLREVKLQRMQRLQDLASTMLELWNLMDTPIEEQQMFQNITCNIAASEHEITEPNTLSVDFINYVEAEVSRLEELKSSKMKELVLKKRSELEEICRKTHMVLEADSAIDYVIEAIDSGDVDPACVLDQIELQVAKVKEEAFSRKEILEKVDK 387

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: A0A067K8W6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15429 PE=4 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 1.331e-112
Identity = 168/228 (73.68%), Postives = 202/228 (88.60%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELHRQL+ L+ EK+DRLKQ+++HL  LNSLCLV+G+D+KLT++E+HPS GDSEG   ISN++I++LAT I KL+E+KI+RMQ+LQDL TTML+LW LMDTPIEEQQMFQNVTCNIAASE EI EP TLS DFI YVEAEVSRLEELKSSKMK+LVL KR ELE+ICRKTH++P++ +A++ AIEAIESG V  A +LEQIELQIA +KEEAFSR+EILE+VEK
Sbjct:  156 LRKLEELHRQLHALQTEKSDRLKQIQEHLDTLNSLCLVLGMDYKLTISEIHPSFGDSEGSRLISNDSIQKLATAIHKLREIKIQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEQEITEPNTLSDDFINYVEAEVSRLEELKSSKMKDLVLKKRSELEDICRKTHMIPEADTAIDYAIEAIESGNVDPANVLEQIELQIANIKEEAFSRKEILEKVEK 383

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: B9ICW8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14350g PE=4 SV=2)

HSP 1 Score: 349.362 bits (895), Expect = 4.418e-112
Identity = 173/228 (75.88%), Postives = 200/228 (87.72%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L+KLEELHRQL+ELEKEK+DR+KQV+ HL  LN+LCLV+G+DFK TV+EVHPS GDS G   ISN TI+ LAT I KL+EVKI+RMQ+LQDL TTML+LW LMDTPIEEQQ FQNVTCNIAASEHEI EP TLSV+FIKYVEAEVSRLEELKSSKMKELVL KR ELEEICRK H++P++ +AVE A+EAIESG +   +ILEQIE+QIA VKEE+FSR+EILE+VEK
Sbjct:  157 LKKLEELHRQLHELEKEKSDRMKQVQQHLDTLNALCLVLGMDFKHTVSEVHPSFGDSGGLRDISNLTIQHLATTIHKLREVKIQRMQKLQDLATTMLELWNLMDTPIEEQQEFQNVTCNIAASEHEITEPNTLSVEFIKYVEAEVSRLEELKSSKMKELVLKKRSELEEICRKMHMIPETDAAVEYAVEAIESGNMDPESILEQIEVQIANVKEESFSRKEILEKVEK 384

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Match: W9SQM5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012976 PE=4 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 1.108e-111
Identity = 177/228 (77.63%), Postives = 198/228 (86.84%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELHRQL  L+KEK DRLKQV+DHL  LNSLCLV+G+DFK T+ EVHPSLGDSEG  ++SN TIE LA  I++L+ VKI+RMQ LQDL T+ML+LW LMDTPIEEQQMFQNVTCN+AASE EI EP TLSVDFI YVEAEVSRLEE KSSKMKELV+ KR ELEEICRKT +V +S SA+E AIEA+ESGAV AA ILEQIELQIAKVKEEAFSR+EILE+VEK
Sbjct:  159 LRKLEELHRQLQALQKEKMDRLKQVQDHLCTLNSLCLVLGMDFKQTIGEVHPSLGDSEGSNNLSNGTIELLAAAIQRLRGVKIKRMQMLQDLATSMLELWNLMDTPIEEQQMFQNVTCNVAASEDEITEPNTLSVDFINYVEAEVSRLEEFKSSKMKELVIKKRSELEEICRKTRMVLESDSALECAIEALESGAVDAAFILEQIELQIAKVKEEAFSRKEILEKVEK 386

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA653_ARATH (65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana GN=MAP65-3 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 5.211e-92
Identity = 148/228 (64.91%), Postives = 181/228 (79.39%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            +RKLEELH QL  L+KEK DR++ +  HL  L S C V+G+DF   V +V+P+L D EG  S+S++TIE+L   ++KL EVKI+RMQRLQDL TTML+LW LMDTPIEEQQ +Q++TCNIAASEHEI E  +LS DFIKYVEAEV RL+E+K+SKMKELVL KR ELEEICRKTHL+P S SA++  I AIESG V A  +LE +E  I+K+KEEA SR+EILERVEK
Sbjct:  160 MRKLEELHCQLQVLQKEKIDRVETIRKHLCTLYSHCSVLGMDFNEVVGQVNPTLSDPEGPRSLSDHTIEKLGAAVQKLMEVKIQRMQRLQDLATTMLELWNLMDTPIEEQQEYQHITCNIAASEHEITEANSLSEDFIKYVEAEVVRLDEVKASKMKELVLKKRSELEEICRKTHLLPVSDSAIDQTIVAIESGIVDATMVLEHLEQHISKIKEEALSRKEILERVEK 387

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA659_ARATH (65-kDa microtubule-associated protein 9 OS=Arabidopsis thaliana GN=MAP65-9 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 8.893e-84
Identity = 135/229 (58.95%), Postives = 181/229 (79.04%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQS-AVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKLEELHR+L  L+++K +R+KQ++D++  L SLC V+G++F+ TVT++HPSL D+EG  SISN T+++LA+ +++  E KI+RMQ LQDL TTML+ W LMDTP EEQQ F +V+CNIAA+  EI +P +LS+D ++ V+AE+ RLEELK SKMKELVL KR ELEEICR+TH+V + +  AVE+ I+AIESG V    ILEQIE +  KVKEEA SR+EILE+ +K
Sbjct:  161 LRKLEELHRELYTLQEQKRNRVKQIQDNIRTLESLCSVLGLNFRETVTKIHPSLVDTEGSRSISNETLDKLASSVQQWHETKIQRMQELQDLVTTMLEFWNLMDTPAEEQQKFMDVSCNIAATVSEITKPNSLSIDLLEEVKAELCRLEELKWSKMKELVLKKRSELEEICRRTHIVLEEEDIAVENVIKAIESGDVNPENILEQIEYRAGKVKEEALSRKEILEKADK 389

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA654_ARATH (65-kDa microtubule-associated protein 4 OS=Arabidopsis thaliana GN=MAP65-4 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.019e-62
Identity = 119/228 (52.19%), Postives = 163/228 (71.49%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L++LEEL  QL EL+ EK+ RL++VE  L  LNSLC V+G DFK  +  +H SL DS     +S +T+++L  +I  L+E K++RMQ++QDL  ++L+LW L+DTP EEQ++F NVTC+IA +E EI E   LSV  IK VE EV RL ++K +K+KE++L KRLELEEI RK H+  +   +   ++EAIESG      +LEQI+ +IAKVKEEA SR+EILE+VEK
Sbjct:  157 LQRLEELRSQLGELQNEKSKRLEEVECLLKTLNSLCSVLGEDFKGMIRGIHSSLVDS-NTRDVSRSTLDKLDMMIVNLREAKLQRMQKVQDLAVSLLELWNLLDTPAEEQKIFHNVTCSIALTESEITEANILSVASIKRVEDEVIRLSKIKITKIKEVILRKRLELEEISRKMHMATEVLKSENFSVEAIESGVKDPEQLLEQIDSEIAKVKEEASSRKEILEKVEK 383

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA651_ARATH (65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana GN=MAP65-1 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.602e-60
Identity = 107/230 (46.52%), Postives = 161/230 (70.00%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWS--ISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L+KL++   QL EL+KEK+DRL++V + ++ ++ LC V+G+DF  TVTEVHPSL +     S  ISN T+ +LA  +  L++ K +R+Q+LQ+L T ++ LW LMDTP EE+++F +VTCNI++S  E+  P  L+ D I+  E EV RL++LK+S+MKE+   K+ ELEEI  + H+  + +SA E  +  I+SG V    +L  ++ QI+K KEEAFSR++IL+RVEK
Sbjct:  157 LKKLDDFQSQLQELQKEKSDRLRKVLEFVSTVHDLCAVLGLDFLSTVTEVHPSLDEDTSVQSKSISNETLSRLAKTVLTLKDDKKQRLQKLQELATQLIDLWNLMDTPDEERELFDHVTCNISSSVDEVTVPGALARDLIEQAEVEVDRLDQLKASRMKEIAFKKQSELEEIYARAHVEVNPESARERIMSLIDSGNVEPTELLADMDSQISKAKEEAFSRKDILDRVEK 386

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA652_ARATH (65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana GN=MAP65-2 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.910e-56
Identity = 104/230 (45.22%), Postives = 158/230 (68.70%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFW--SISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            L++L++  R+L EL+KEK+DRL++V + ++ ++ LC V+ +DF  TVTEVHPSL ++ G    SISN T+ +LA  +  L+E K++R+++LQ+L T +  LW LMDT  EE+++F +VT NI+AS HE+     L++D I+  E EV RL++LKSS+MKE+   K+ ELEEI  + H+    +   E  +  I++G      +L  ++ QIAK KEEAFSR+EIL+RVEK
Sbjct:  157 LKRLDDFQRKLQELQKEKSDRLQKVLEFVSTVHDLCAVLRLDFLSTVTEVHPSLDEANGVQTKSISNETLARLAKTVLTLKEDKMQRLKKLQELATQLTDLWNLMDTSDEERELFDHVTSNISASVHEVTASGALALDLIEQAEVEVDRLDQLKSSRMKEIAFKKQSELEEIYARAHIEIKPEVVRERIMSLIDAGNTEPTELLADMDSQIAKAKEEAFSRKEILDRVEK 386

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA656_ARATH (65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana GN=MAP65-6 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.320e-55
Identity = 99/230 (43.04%), Postives = 155/230 (67.39%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSL--GDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LR L E    L  L+KEK+DRL +V  ++  +++LC V+G+DF  TV+ VHPSL   D E   +IS++T+E L  +I+KL+  +  R Q+L+D+  ++ +LW LMDTP E++  F  VT  + +SE  I EP  LS + I+ V  EV  L +LK+S+MKELV+ +R ELE++CR TH+ PD+ ++ E +   I+SG V  + +L  IE+QI K+K+EA SR++I++R+++
Sbjct:  167 LRNLNEYQTHLRTLQKEKSDRLNKVLGYVNEVHALCGVLGVDFSQTVSAVHPSLHRTDQEQSTNISDSTLEGLEHMIQKLKTERKSRFQKLKDVVASLFELWNLMDTPQEDRTKFGKVTYVVRSSEANITEPGILSTETIEQVSTEVDSLSKLKASRMKELVMKRRSELEDLCRLTHIQPDTSTSAEKSTALIDSGLVDPSELLANIEMQINKIKDEAQSRKDIMDRIDR 396

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA657_ARATH (65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana GN=MAP65-7 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.600e-55
Identity = 100/230 (43.48%), Postives = 155/230 (67.39%), Query Frame = -2

Query:    2 LRKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSL--GDSEGFWSISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 685
            LRKL E    L  L+KEK+DRL +V D++  +++LC V+G+DF  TV+EVHPSL   D E   +IS++T++ L  +I KL+  +  R Q+L+D+  ++ +LW LMDT  EE+  F +V+  + +SE +I EP  LS + I+ V AEV    +LK+S+MKELV+ +R ELE +CR  H+  D+ +++E +   I+SG V  + +L  IEL I K+KEEA SR+EI++R+++
Sbjct:  167 LRKLNEYQTHLRSLQKEKSDRLNKVLDYVNEVHTLCGVLGVDFGQTVSEVHPSLHRTDHEQSTNISDDTLDGLHHMIHKLKTERSVRFQKLKDVAGSLFELWNLMDTSQEERTKFASVSYVVRSSESDITEPNILSSETIEQVSAEVDCFNKLKASRMKELVMKRRTELENLCRLAHIEADTSTSLEKSTALIDSGLVDPSELLTNIELHINKIKEEAHSRKEIIDRIDR 396

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA655_ARATH (65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 1.404e-44
Identity = 93/229 (40.61%), Postives = 143/229 (62.45%), Query Frame = -2

Query:    2 RKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFWS--ISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHLVPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 682
            RKL+EL   L +L  EK  RL++V  +++ ++ L  ++  DF   +  VH SL +     S  ISN+T+ +   L+K L+  K ER+ +LQ LG +M +LW LM+TP++E++ F + +  +++   +  +   LS+D I+  E EV RL  LKSSKMKELV  ++ ELEEICR  H+  +S +A +  +E IESG    + IL  I+ QI K +EEA SR+EIL++V+K
Sbjct:  150 RKLDELRADLQDLRNEKAVRLQKVNSYISAVHELSEILSFDFSKALNSVHSSLTEFSKTHSKSISNDTLARFTELVKSLKAEKHERLLKLQGLGRSMQELWNLMETPMDERRRFDHCSSLLSSLPDDALKKGCLSLDIIREAEDEVRRLNSLKSSKMKELVFKRQCELEEICRGNHMDINSDAARKSLVELIESGDGDLSDILASIDGQIEKAREEALSRKEILDKVDK 378

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Match: MA658_ARATH (65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana GN=MAP65-8 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.834e-38
Identity = 77/229 (33.62%), Postives = 146/229 (63.76%), Query Frame = -2

Query:    2 RKLEELHRQLNELEKEKNDRLKQVEDHLTMLNSLCLVMGIDFKLTVTEVHPSLGDSEGFW-SISNNTIEQLATLIKKLQEVKIERMQRLQDLGTTMLKLWKLMDTPIEEQQMFQNVTCNIAASEHEIAEPTTLSVDFIKYVEAEVSRLEELKSSKMKELVLNKRLELEEICRKTHL-VPDSQSAVEDAIEAIESGAVGAATILEQIELQIAKVKEEAFSRREILERVEK 682
            +KLEE   +L+ L  EKN+RL++V+ ++  +  L   +G +  + +T++HPSL D  G   +IS++ +++L   +  L+E K +R+++L  LG  +  LW LMD   E++Q F +V   ++++  ++  P ++++D I+  EAEV RL++LK+S++KEL + K+ ELE+ C  +H+  P ++  + +    ++SG V    +L  ++ +IA+ KEEA SR+ I+E+V++
Sbjct:  166 KKLEEYQNELHRLHDEKNERLQKVDIYICAIRDLSATLGTEASMIITKIHPSLNDLYGISKNISDDILKKLNGTVVSLEEEKHKRLEKLHHLGRALSNLWNLMDASYEDRQKFFHVIDLLSSAPSDVCAPGSITLDIIQQAEAEVKRLDQLKASRIKELFIKKQKELEDTCNMSHMETPSTE--MGNITNLVDSGEVDHVDLLAAMDEKIARAKEEAASRKGIIEKVDR 392

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0NAV0_GOSAR	5.898e-129	85.09	65-kDa microtubule-associated 3-like protein OS=Go...	[more]
A0A0D2NMP1_GOSRA	9.297e-128	84.65	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
D7T1Y3_VITVI	6.997e-115	76.32	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A0D2QDA0_GOSRA	2.267e-114	78.07	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
A0A0D2RZ78_GOSRA	2.392e-114	78.07	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
A0A0D2T109_GOSRA	3.381e-114	78.07	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
M5X644_PRUPE	8.431e-113	75.00	Uncharacterized protein OS=Prunus persica GN=PRUPE...	[more]
A0A067K8W6_JATCU	1.331e-112	73.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
B9ICW8_POPTR	4.418e-112	75.88	Uncharacterized protein OS=Populus trichocarpa GN=...	[more]
W9SQM5_9ROSA	1.108e-111	77.63	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0011072 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 9


Match Name	E-value	Identity	Description
MA653_ARATH	5.211e-92	64.91	65-kDa microtubule-associated protein 3 OS=Arabido...	[more]
MA659_ARATH	8.893e-84	58.95	65-kDa microtubule-associated protein 9 OS=Arabido...	[more]
MA654_ARATH	2.019e-62	52.19	65-kDa microtubule-associated protein 4 OS=Arabido...	[more]
MA651_ARATH	2.602e-60	46.52	65-kDa microtubule-associated protein 1 OS=Arabido...	[more]
MA652_ARATH	1.910e-56	45.22	65-kDa microtubule-associated protein 2 OS=Arabido...	[more]
MA656_ARATH	3.320e-55	43.04	65-kDa microtubule-associated protein 6 OS=Arabido...	[more]
MA657_ARATH	9.600e-55	43.48	65-kDa microtubule-associated protein 7 OS=Arabido...	[more]
MA655_ARATH	1.404e-44	40.61	65-kDa microtubule-associated protein 5 OS=Arabido...	[more]
MA658_ARATH	2.834e-38	33.62	65-kDa microtubule-associated protein 8 OS=Arabido...	[more]

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22
None	No IPR available	PFAM	PF03999	MAP65_ASE1	coord: 2..222 e-value: 8.0E-50 score: 170.0
None	No IPR available	PANTHER	PTHR19321:SF7	65-KDA MICROTUBULE-ASSOCIATED PROTEIN 3-RELATED	coord: 1..222
IPR007145	Microtubule-associated protein, MAP65/Ase1/PRC1	PANTHER	PTHR19321	PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED	coord: 1..222

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0011072 ID=g.arboreum_cottongen_reftransV1_0011072; Name=g.arboreum_cottongen_reftransV1_0011072; organism=Gossypium arboreum; type=contig; length=686bp
ATTTCTCCACCCTTTCAAGTATTTCTCGCCTGCTAAAAGCTTCCTCTTTG
ACCTTAGCAATTTGAAGTTCAATCTGTTCTAGTATGGTAGCAGCACCAAC
AGCCCCAGACTCAATAGCTTCAATGGCATCTTCTACTGCACTTTGTGAAT
CTGGGACCAAGTGCGTCTTCCTACATATCTCCTCCAGCTCTAATCTCTTA
TTCAGGACAAGCTCTTTCATTTTGCTAGACTTTAACTCTTCCAACCTAGA
AACTTCTGCCTCAACATATTTGATGAAATCCACAGAGAGAGTGGTGGGTT
CTGCAATTTCATGTTCTGAAGCAGCTATATTACAGGTAACATTCTGAAAC
ATCTGTTGCTCCTCAATAGGTGTATCCATCAGTTTCCATAATTTCAACAT
GGTAGTACCAAGATCTTGTAGCCTTTGCATCCTCTCTATCTTAACTTCCT
GTAACTTTTTAATCAAAGTAGCCAGCTGCTCAATTGTGTTATTGCTAATA
CTCCAAAATCCTTCAGAGTCACCTAAACTAGGATGGACCTCAGTAACTGT
GAGCTTGAAATCGATGCCCATCACCAAGCAGAGTGAGTTCAACATGGTAA
GGTGGTCCTCAACCTGCTTTAAACGGTCATTCTTCTCTTTCTCAAGTTCA
TTGAGCTGTCTGTGCAATTCTTCAAGCTTCCTTAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR007145	MAP65_Ase1_PRC1

Vocabulary: **Biological Process**
Term	Definition
GO:0000226	microtubule cytoskeleton organization
GO:0000910	cytokinesis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008017	microtubule binding

Search form

g.arboreum_cottongen_reftransV1_0011072, g.arboreum_cottongen_reftransV1_0011072 (contig) Gossypium arboreum

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