g.arboreum_cottongen_reftransV1_0012411, g.arboreum_cottongen_reftransV1_0012411 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A0B0MEB5_GOSAR (Amidase 1-like protein OS=Gossypium arboreum GN=F383_18931 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 5.052e-74 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS Sbjct: 498 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 635
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A0D2PXP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G221100 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 5.929e-73 Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQVS+ASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAIS DKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAE+RLRKLVS Sbjct: 445 EQVSMASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAISLDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAERRLRKLVS 582
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A0D2NGY2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G221100 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.282e-72 Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQVS+ASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAIS DKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAE+RLRKLVS Sbjct: 466 EQVSMASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNGTNATYYNNRAAAYLELGCFQQAEEDCNKAISLDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAERRLRKLVS 603
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A061E2D6_THECC (Translocon at the outer membrane of chloroplasts 64-V isoform 1 OS=Theobroma cacao GN=TCM_007478 PE=4 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.007e-66 Identity = 125/137 (91.24%), Postives = 133/137 (97.08%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 +QVSIASN APLPD+NGNMDASELLKEKGNAAFKG QWNKAV+YY++AIKLNGT ATYYNNRAAAYLELGCFQQAEEDC+KAIS DKKNVKAYLRRGTAR+SLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKL+ Sbjct: 469 DQVSIASNLAPLPDVNGNMDASELLKEKGNAAFKGMQWNKAVSYYSKAIKLNGTTATYYNNRAAAYLELGCFQQAEEDCSKAISLDKKNVKAYLRRGTARESLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLI 605
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A067KXG8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24900 PE=4 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 7.686e-66 Identity = 121/138 (87.68%), Postives = 131/138 (94.93%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQV I SNSAP+PD+NGN+DASELLKEKGNAAFKGKQWNKAVNYYTEAIKLN NATYY+NRAAA+LELGCFQQAEEDC+KAIS DKKNVKAYLRRGTAR+SLL YKEA +DFKHALVLEPQNKVA+LAEKRLRKL+S Sbjct: 468 EQVGIVSNSAPIPDINGNIDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLNELNATYYSNRAAAFLELGCFQQAEEDCSKAISLDKKNVKAYLRRGTARESLLFYKEAAQDFKHALVLEPQNKVASLAEKRLRKLMS 605
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: D7TR56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g00300 PE=4 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.697e-64 Identity = 122/138 (88.41%), Postives = 128/138 (92.75%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQ SI SNS PLPD NG+MDASELLKEKGNAAFKG+QWNKAVNYYTEAIKLN TNATYY NRAAAYLELGCFQQA EDC+KAI DKKNVKAYLRRGTAR+SLLCYKEA +DFKHALVLEPQNKVANLAEKRLRKL+S Sbjct: 470 EQASITSNSLPLPDTNGDMDASELLKEKGNAAFKGRQWNKAVNYYTEAIKLNETNATYYCNRAAAYLELGCFQQAVEDCSKAILLDKKNVKAYLRRGTARESLLCYKEAAQDFKHALVLEPQNKVANLAEKRLRKLMS 607
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: M5VMQ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003071mg PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.168e-63 Identity = 118/138 (85.51%), Postives = 130/138 (94.20%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 E+VSIAS+S+PLPD N N+D SELLKEKGNAAFKGKQWNKAV YYTEAIKLN T+ATYY NRAAAYLELGCFQQAEEDC+KAIS DKKNVKAY+RRGTAR+SLLCYK+A +DFKHALVLEPQNKVANLAEKRLR+L+S Sbjct: 470 EKVSIASHSSPLPDTNDNLDVSELLKEKGNAAFKGKQWNKAVKYYTEAIKLNMTSATYYCNRAAAYLELGCFQQAEEDCSKAISLDKKNVKAYMRRGTARESLLCYKDAAQDFKHALVLEPQNKVANLAEKRLRELMS 607
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A068TQ00_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_1 OS=Coffea canephora GN=GSCOC_T00014789001 PE=4 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.619e-63 Identity = 115/138 (83.33%), Postives = 124/138 (89.86%), Query Frame = 1 Query: 1 EQVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 ++VS SNS PLPD+NGNM+ SELLKEKGNAA+KGKQWNKAV+YYTEAI LN ATYY NRAAA+LELGCFQQAEEDC AIS DKKNVKAYLRRGTAR+SLLCYKEAL DFKHALVLEPQNK ANLAEKRLRKL+S Sbjct: 464 DEVSTVSNSPPLPDINGNMETSELLKEKGNAAYKGKQWNKAVSYYTEAIGLNDKIATYYCNRAAAFLELGCFQQAEEDCTSAISLDKKNVKAYLRRGTARESLLCYKEALLDFKHALVLEPQNKAANLAEKRLRKLIS 601
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: A0A0A0K408_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062900 PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.958e-58 Identity = 116/139 (83.45%), Postives = 128/139 (92.09%), Query Frame = 1 Query: 1 EQVSIASNSA-PLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 EQV +ASN+ P D NG+MDASELLKEKGNAAFKG+QWNKAVNYYT+AIKLNGTNATYY NRAAAYLELGCFQQAE+DC+KAI DKK VKAYLRRGTAR+SLL YKEA++DFKHALVLEPQNKVANLAEKRL+KL+S Sbjct: 468 EQVGVASNNLLPFADTNGDMDASELLKEKGNAAFKGRQWNKAVNYYTDAIKLNGTNATYYCNRAAAYLELGCFQQAEDDCSKAILLDKKTVKAYLRRGTARESLLLYKEAIKDFKHALVLEPQNKVANLAEKRLQKLIS 606
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Match: K4CZZ3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g047300.1 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.710e-57 Identity = 103/137 (75.18%), Postives = 119/137 (86.86%), Query Frame = 1 Query: 4 QVSIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLVS 414 +VSI S+++PLPD NG++DASELLKEKGNAA+KGKQWNKAV+YYTEAIKLN Y N AA LELGCF QAEEDC KAIS DKKNVKAY+RRGTAR+SLL YKEAL+D +HALVLEPQNK A+++EKRLRKL+S Sbjct: 463 EVSIQSSASPLPDTNGSIDASELLKEKGNAAYKGKQWNKAVSYYTEAIKLNDNATYYSNRAAAY-LELGCFHQAEEDCTKAISLDKKNVKAYMRRGTARESLLFYKEALQDIRHALVLEPQNKYASVSEKRLRKLIS 598
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: PPP5_RAT (Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus GN=Ppp5c PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.478e-11 Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 37 PDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 P G + +E LK + N FK K + A+ +Y++AI+LN +NA YY NR+ AYL C+ A D +AI DKK +K Y RR + +L ++ AL D++ + ++P +K A + + K+V Sbjct: 19 PPAEGTLKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDKDAKMKYQECSKIV 143
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: RPAP3_XENTR (RNA polymerase II-associated protein 3 OS=Xenopus tropicalis GN=rpap3 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 9.293e-11 Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 70 LLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLA-EKRLRKLVS 414 + K+ GNA FK ++ A++ Y++ ++ + TNA NRA AYL++ +++AE DC AIS D KA+ RRGTAR L KEA EDF+ L L+P NK A L EK R+L S Sbjct: 286 MQKDLGNAYFKEGKYEIAIDCYSQGMEADTTNALLPANRAMAYLKIQKYKEAETDCTLAISLDASYCKAFARRGTARIMLGKQKEAKEDFEMVLKLDPGNKQAVLELEKISRELRS 401 HSP 2 Score: 54.299 bits (129), Expect = 1.918e-7 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 1 Query: 70 LLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQN 369 L KEKGN FK Q+++A+ YT + + NA NRA+A+ L + AE DCN AI+ + KAY RRG AR +L + A ED++ L L+ N Sbjct: 134 LEKEKGNNYFKSGQYDEAIECYTRGMDADPYNAVLPTNRASAFFRLKKYAVAESDCNLAIALNHNYAKAYARRGAARLALKDLQGAKEDYEKVLELDVNN 233
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: SGTB_MOUSE (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Mus musculus GN=Sgtb PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.056e-10 Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 19 SNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKV--ANL--AEKRLRKLVS 414 SNS P ++ ++ LK++GN K + + AV+ YT+AI+L+ NA YY NRAAA +L + A +DC KAI+ D K KAY R G A ++ ++EA+ ++ AL L+P+N +NL AE++LR++ S Sbjct: 75 SNSVP-----EDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSS 205
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: SGTB_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 4.558e-10 Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 19 SNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKV--ANL--AEKRLRKLVS 414 SNS P ++ ++ LK++GN K + + AV+ YT+AI+L+ NA YY NRAAA +L + A +DC KAI+ D K KAY R G A ++ ++EA+ ++ AL L+P+N +NL AE++LR++ S Sbjct: 75 SNSVP-----EDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSS 205
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: DYXC1_PONPY (Dyslexia susceptibility 1 candidate gene 1 protein homolog OS=Pongo pygmaeus GN=DYX1C1 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.249e-10 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 10 SIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISF------DKKN--VKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 ++ ++ A L DL E LK+KGN F + + A+N Y AI+LN Y NRAA +L+L +A ED +KA+ D N +KA++RRGTA L Y E L+D++ AL ++P NK+ + +++R ++ Sbjct: 272 AMNTDIAELCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVI 413
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: DYXC1_GORGO (Dyslexia susceptibility 1 candidate gene 1 protein homolog OS=Gorilla gorilla gorilla GN=DYX1C1 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.403e-10 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 10 SIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISF------DKKN--VKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 ++ ++ A L DL E LK+KGN F + + A+N Y AI+LN Y NRAA +L+L +A ED +KA+ D N +KA++RRGTA L Y E L+D++ AL ++P NK+ + +++R ++ Sbjct: 272 AMNTDIAELCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVI 413
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: DYXC1_PANPA (Dyslexia susceptibility 1 candidate gene 1 protein homolog OS=Pan paniscus GN=DYX1C1 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.560e-10 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 10 SIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISF------DKKN--VKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 ++ ++ A L DL E LK+KGN F + + A+N Y AI+LN Y NRAA +L+L +A ED +KA+ D N +KA++RRGTA L Y E L+D++ AL ++P NK+ + +++R ++ Sbjct: 272 AMNTDIAELCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVI 413
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: DYXC1_HUMAN (Dyslexia susceptibility 1 candidate gene 1 protein OS=Homo sapiens GN=DYX1C1 PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 8.560e-10 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 10 SIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISF------DKKN--VKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 ++ ++ A L DL E LK+KGN F + + A+N Y AI+LN Y NRAA +L+L +A ED +KA+ D N +KA++RRGTA L Y E L+D++ AL ++P NK+ + +++R ++ Sbjct: 272 AMNTDIAELCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVI 413
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: DYXC1_PANTR (Dyslexia susceptibility 1 candidate gene 1 protein homolog OS=Pan troglodytes GN=DYX1C1 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 8.802e-10 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 10 SIASNSAPLPDLNGNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISF------DKKN--VKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVANLAEKRLRKLV 411 ++ ++ A L DL E LK+KGN F + + A+N Y AI+LN Y NRAA +L+L +A ED +KA+ D N +KA++RRGTA L Y E L+D++ AL ++P NK+ + +++R ++ Sbjct: 272 AMNTDIAELCDLKEEEKNPEWLKDKGNKLFATENYLAAINAYNLAIRLNNKMPLLYLNRAACHLKLKNLHKAIEDSSKALELLMPPVTDNANARMKAHVRRGTAFCQLELYVEGLQDYEAALKIDPSNKIVQIDAEKIRNVI 413
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Match: TOM34_PONAB (Mitochondrial import receptor subunit TOM34 OS=Pongo abelii GN=TOMM34 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.333e-10 Identity = 40/110 (36.36%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 49 GNMDASELLKEKGNAAFKGKQWNKAVNYYTEAIKLXXXXXXXXXXXXXXXLELGCFQQAEEDCNKAISFDKKNVKAYLRRGTARDSLLCYKEALEDFKHALVLEPQNKVA 378 G+++ +++LKE+GN K KA+ Y+E++ + + Y+NRA YL L + +A +DC +A+ D KNVKA+ RR A +L YK + D + L +EP+N A Sbjct: 188 GDVEKAKVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPA 297 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0012411 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0012411 ID=g.arboreum_cottongen_reftransV1_0012411; Name=g.arboreum_cottongen_reftransV1_0012411; organism=Gossypium arboreum; type=contig; length=647bpback to top |