g.arboreum_cottongen_reftransV1_0013342, g.arboreum_cottongen_reftransV1_0013342 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Match: G7LH14_MEDTR (Inositol-tetrakisphosphate 1-kinase OS=Medicago truncatula GN=MTR_8g066720 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 6.747e-35 Identity = 82/151 (54.30%), Postives = 101/151 (66.89%), Query Frame = -1 Query: 3 IGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKI---------NNTGVPKQITITEVTGLENLK----LNFPLIAKPLDADGSETSHK 416 IGYAL PKK+ +FI SLL+ A G+ L +ID TKPLI QGPFDCILHKLY DWK+ LQ F RNPN I+D+PE+I+ L NRISML+ VS+L++ G+PKQI I + L + + L FP+IAKPL ADGS SHK Sbjct: 9 IGYALAPKKQNSFIRDSLLTLASSRGIKLIQIDSTKPLIDQGPFDCILHKLYGDDWKRQLQQFQIRNPNAVILDAPEAIERLHNRISMLQVVSELRVRVGVDEKGGETFGIPKQIVIYDKETLSDGQAWESLKFPVIAKPLVADGSAKSHK 159
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Match: A0A059CID6_EUCGR (Inositol-tetrakisphosphate 1-kinase OS=Eucalyptus grandis GN=EUGRSUZ_D02214 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.713e-34 Identity = 73/153 (47.71%), Postives = 105/153 (68.63%), Query Frame = -1 Query: 3 LSSKPYQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNT----GVPKQITITEVTGLEN----LKLNFPLIAKPLDADGSETSHK 437 ++ +++GYAL PKK ++FI SL++ A GV L +ID +PL+ QGPFDC+LHKLY DW++ L++F +RNPN ++DSP++I+ L NRISML+ VS+L++ + G+P QI I + L + L FP+IAKPL ADGS SHK Sbjct: 1 MAEGRFRVGYALLPKKRESFIQDSLVALAGSRGVDLVRIDAGRPLVDQGPFDCVLHKLYGEDWRRQLEEFTARNPNAVVLDSPDAIERLHNRISMLQVVSELRVESESESFGIPNQIVIYDKETLVDKHAWASLKFPVIAKPLVADGSAKSHK 153
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Match: F6HEE3_VITVI (Inositol-tetrakisphosphate 1-kinase OS=Vitis vinifera GN=VIT_16s0039g01700 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.328e-34 Identity = 79/150 (52.67%), Postives = 106/150 (70.67%), Query Frame = -1 Query: 3 KPYQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKI----NNTGVPKQITITEVTGLENLK----LNFPLIAKPLDADGSETSHK 428 + + +GYAL PKK +FI PSL+ A Q G+ L +ID KPLI+QGPFDCI+HK+ D DWK L++F+++NPN+ IID P++I+ L +RISMLE V +LKI + G+PKQI I + L + K L+FP+IAKPL ADGS SHK Sbjct: 6 RRFTVGYALAPKKVSSFIQPSLVDHAKQRGIDLVRIDLDKPLIEQGPFDCIIHKMNDEDWKNQLEEFSTKNPNVVIIDPPDAIEQLHSRISMLEVVKELKIPEGTESFGIPKQIVIYDPESLLDSKVLDGLSFPVIAKPLVADGSAKSHK 155
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Match: I1L4Y5_SOYBN (Inositol-tetrakisphosphate 1-kinase OS=Glycine max PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.898e-34 Identity = 77/152 (50.66%), Postives = 103/152 (67.76%), Query Frame = -1 Query: 3 SSKPYQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNT----GVPKQITITEVTGLENLK----LNFPLIAKPLDADGSETSHK 434 K ++IGYAL PKK+ +FI SL++ A G+ L ++DP + L QGPFDC+LHKLY DWK+ L +F + PN ++DSPESI+ L NRISML+ VS+L I++ G+PKQI I + L + + LNFP+IAKPL ADGS SHK Sbjct: 3 EEKRFRIGYALLPKKQNSFIRDSLVNLARSRGIDLVRVDPNRNLTDQGPFDCVLHKLYGDDWKRQLTEFTVKYPNAVVLDSPESIERLHNRISMLQVVSELNIDDGSETFGIPKQIVIYDKETLLDRRNWEALNFPVIAKPLVADGSAKSHK 154
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Match: W9R373_9ROSA (Inositol-tetrakisphosphate 1-kinase OS=Morus notabilis GN=L484_017781 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.066e-34 Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = -1 Query: 3 LSSKPYQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNT----GVPKQITITEVTGL------ENLKLNFPLIAKPLDADGSETSHK 437 ++ + + +GYAL PKK+Q+FI SL+S A G+ L +I+ PL QGPFDC+LHKLY DW++ L+DF ++NPN IID PE+I+ L NRISML+ VS+LKI + G+PKQI I + L E LK FP+IAKPL ADGS SHK Sbjct: 1 MAERRFGVGYALAPKKQQSFIQDSLVSLARSRGIDLVRIEREIPLADQGPFDCVLHKLYGDDWRRQLEDFRAKNPNAVIIDYPEAIERLHNRISMLQVVSELKIEDRSETFGIPKQIVIYDKETLFDRPAWEGLK--FPVIAKPLVADGSAKSHK 153
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK1_ARATH (Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.009e-35 Identity = 74/157 (47.13%), Postives = 105/157 (66.88%), Query Frame = -1 Query: 3 MSNLSSKPYQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKI-----NNTGVPKQITITEVTGLEN----LKLNFPLIAKPLDADGSETSHK 446 MS+ + Y +GYAL KK+ +FI PSL+ + Q G+ L K+DPTK L++QG DCI+HKLYD WK+NL +F + P +P+ID PE+I+ L NR+SMLE +++L+ GVP+Q+ + + + L +L FP+IAKPLDADGS SHK Sbjct: 1 MSDSIQERYLVGYALAAKKQHSFIQPSLIEHSRQRGIDLVKLDPTKSLLEQGKLDCIIHKLYDVYWKENLHEFREKCPGVPVIDLPEAIERLHNRVSMLEVITQLRFPVSDSERFGVPEQVVVMDSSVLSGGGALGELKFPVIAKPLDADGSAKSHK 157
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK1_MAIZE (Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.167e-33 Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = -1 Query: 3 YQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKL-----KINNTGVPKQITITEVTGLENL----KLNFPLIAKPLDADGSETSHK 422 Y IGYAL PKK+Q+FI PSL++ A G+ L +D ++PL +QGPF ++HKLY DW+ L FA+R+P +PI+D P +ID L NRISML+ VS+L + + G+P Q+ + + L + L FPLIAKPL ADG+ SHK Sbjct: 19 YVIGYALAPKKQQSFIQPSLVAQAASRGMDLVPVDASQPLAEQGPFHLLIHKLYGDDWRAQLVAFAARHPAVPIVDPPHAIDRLHNRISMLQVVSELDHAADQDSTFGIPSQVVVYDAAALADFGLLAALRFPLIAKPLVADGTAKSHK 167
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK5_ORYSJ (Inositol-tetrakisphosphate 1-kinase 5 OS=Oryza sativa subsp. japonica GN=ITPK5 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.116e-32 Identity = 69/151 (45.70%), Postives = 98/151 (64.90%), Query Frame = -1 Query: 3 YQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKI-------NNTGVPKQITITEVTGLEN----LKLNFPLIAKPLDADGSETSHK 422 Y IGYAL PKK+Q+FI PSL+S A G+ L +DP++PL +QGPF ++HKLY +W+ L F++ +P +P++D P +ID L NRISML+ VS+L + + G+P Q+ + + L + L FPLIAKPL ADG+ SHK Sbjct: 16 YLIGYALAPKKQQSFIQPSLVSRAAGRGMDLVPVDPSRPLPEQGPFHLLIHKLYGEEWRGQLDAFSAAHPAVPVVDPPHAIDRLHNRISMLQVVSELDVPLHAHHHHTFGIPSQVVVYDAAALSDSGLLAALRFPLIAKPLVADGTAKSHK 166
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK5_ORYSI (Inositol-tetrakisphosphate 1-kinase 5 OS=Oryza sativa subsp. indica GN=ITPK5 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.116e-32 Identity = 69/151 (45.70%), Postives = 98/151 (64.90%), Query Frame = -1 Query: 3 YQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKI-------NNTGVPKQITITEVTGLEN----LKLNFPLIAKPLDADGSETSHK 422 Y IGYAL PKK+Q+FI PSL+S A G+ L +DP++PL +QGPF ++HKLY +W+ L F++ +P +P++D P +ID L NRISML+ VS+L + + G+P Q+ + + L + L FPLIAKPL ADG+ SHK Sbjct: 16 YLIGYALAPKKQQSFIQPSLVSRAAGRGMDLVPVDPSRPLPEQGPFHLLIHKLYGEEWRGQLDAFSAAHPAVPVVDPPHAIDRLHNRISMLQVVSELDVPLHAHHHHTFGIPSQVVVYDAAALSDSGLLAALRFPLIAKPLVADGTAKSHK 166
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK1_ORYSJ (Inositol-tetrakisphosphate 1-kinase 1 OS=Oryza sativa subsp. japonica GN=ITPK1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.080e-24 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = -1 Query: 3 IGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNTG----VPKQITITE-----VTGLENLKLNFPLIAKPLDADGSETSHK 416 +GYALT KK ++F+ P LLS A + + ID T+PL +QGPFD ILHKL D +W+Q L+D+ +P + ++D P +I L NR SML+ V+ L ++N P+Q+ I + + + L PL+AKPL DG+ SH+ Sbjct: 46 VGYALTKKKVKSFLQPKLLSLARKKSIHFVSIDETRPLSEQGPFDIILHKLTDKEWQQVLEDYREEHPEVTVLDPPNAIQHLHNRQSMLQEVADLNLSNAYGEVCTPRQLVIMKDPLSIPSAVAKAGLTLPLVAKPLVVDGTSKSHE 192
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK1_ORYSI (Inositol-tetrakisphosphate 1-kinase 1 OS=Oryza sativa subsp. indica GN=ITPK1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.134e-24 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = -1 Query: 3 IGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNTG----VPKQITITE-----VTGLENLKLNFPLIAKPLDADGSETSHK 416 +GYALT KK ++F+ P LLS A + + ID T+PL +QGPFD ILHKL D +W+Q L+D+ +P + ++D P +I L NR SML+ V+ L ++N P+Q+ I + + + L PL+AKPL DG+ SH+ Sbjct: 46 VGYALTKKKVKSFLQPKLLSLARKKSIHFVSIDETRPLSEQGPFDIILHKLTDKEWQQVLEDYREEHPEVTVLDPPNAIQHLHNRQSMLQEVADLNLSNAYGEVCTPRQLVIMKDPLSIPSAVAKAGLTLPLVAKPLVVDGTSKSHE 192
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.651e-24 Identity = 60/147 (40.82%), Postives = 92/147 (62.59%), Query Frame = -1 Query: 3 IGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINNT----GVPKQITITEVT-----GLENLKLNFPLIAKPLDADGSETSHK 416 +GYALT KK ++F+ P L A G++ ID KPL +QGPFD +LHK +W++ L++F +P++ ++D P++I LRNR SML+ V+ + ++++ GVPKQ+ I + + N L PL+AKPL ADGS SH+ Sbjct: 43 VGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAVNNAGLRLPLVAKPLVADGSAKSHE 189
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK4_ORYSJ (Inositol-tetrakisphosphate 1-kinase 4 OS=Oryza sativa subsp. japonica GN=ITPK4 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.130e-23 Identity = 58/144 (40.28%), Postives = 87/144 (60.42%), Query Frame = -1 Query: 6 YQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRX-XXXXXXXXXXXXXILRNRISMLETVSKLKINNTGVPKQITITEVTGLENL----KLNFPLIAKPLDADGSETSH 422 Y +GYAL P+K + + PSL++ A GV L +D ++PL +QGPFD ++HK+YD W+ L++ A+R+ ++DSP +ID L +R +ML+ VS L+ + P+ + + L L FPLIAKPL DGS SH Sbjct: 14 YTVGYALLPEKVSSVVRPSLVALAADRGVRLVAVDVSRPLAEQGPFDLLVHKMYDRGWRAQLEELAARHPGVTVVVDSPGAIDRLLDRATMLDVVSGLRTPVSVPPQVVVSDAAADADELLARAALRFPLIAKPLAVDGSAESH 157
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK4_ORYSI (Inositol-tetrakisphosphate 1-kinase 4 OS=Oryza sativa subsp. indica GN=ITPK4 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.784e-23 Identity = 58/144 (40.28%), Postives = 87/144 (60.42%), Query Frame = -1 Query: 6 YQIGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRX-XXXXXXXXXXXXXILRNRISMLETVSKLKINNTGVPKQITITEVTGLENL----KLNFPLIAKPLDADGSETSH 422 Y +GYAL P+K + + PSL++ A GV L +D ++PL +QGPFD ++HK+YD W+ L++ A+R+ ++DSP +ID L +R +ML+ VS L+ + P+ + + L L FPLIAKPL DGS SH Sbjct: 14 YTVGYALLPEKVSSVVRPSLVALAADRGVRLVAVDVSRPLAEQGPFDLLVHKMYDRGWRAQLEELAARHPGVPVVVDSPGAIDRLLDRATMLDVVSGLRTPVSVPPQVVVSDAAADADELLARAALRFPLIAKPLAVDGSAESH 157
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Match: ITPK2_ORYSJ (Inositol-tetrakisphosphate 1-kinase 2 OS=Oryza sativa subsp. japonica GN=ITPK2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.264e-23 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = -1 Query: 3 IGYALTPKKEQTFIVPSLLSCACQNGVVLTKIDPTKPLIQQGPFDCILHKLYDSDWKQNLQDFASRXXXXXXXXXXXXXXILRNRISMLETVSKLKINN----TGVPKQITITE-----VTGLENLKLNFPLIAKPLDADGSETSHK 416 +GYALT KK ++F+ P+LL A + G+ L ID T+PL +QGPFD ILHK+ +W+Q L+D+ +P + ++D P +I+ L NR SML VS L +++ P+Q+ I T + L PL+AKPL DG+ SH+ Sbjct: 41 VGYALTKKKVKSFLQPNLLLLARKKGINLVAIDDTRPLAEQGPFDVILHKITSKEWQQVLEDYHEEHPEVTVLDPPNAINHLNNRQSMLAEVSDLNLSSFYGEVCTPRQLVIMRDPSSIPTAVAMAGLTLPLVAKPLVVDGTSKSHE 187 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0013342 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013342 ID=g.arboreum_cottongen_reftransV1_0013342; Name=g.arboreum_cottongen_reftransV1_0013342; organism=Gossypium arboreum; type=contig; length=491bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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