g.arboreum_cottongen_reftransV1_0001666, g.arboreum_cottongen_reftransV1_0001666 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Match: A0A096REI9_MAIZE (Uncharacterized protein OS=Zea mays GN=LOC100274333 PE=4 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.795e-97 Identity = 141/195 (72.31%), Postives = 168/195 (86.15%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKDGRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV++IDAQR+LGY L+KDG+ +++PLEKF S VAGR+FHNGRF+Q +R+K ASL NV LEQGTVTSL+EENG VKGVQYK++SG+ L AYAPLTIVCDGCFSNLRR+LCSPKVD+PS FVG +L NC LP N+G +I+A+PSPI+FY Sbjct: 76 LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLQDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHPNHGHVILANPSPILFY 270
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Match: B4G0B2_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 1.814e-97 Identity = 141/195 (72.31%), Postives = 168/195 (86.15%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKDGRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV++IDAQR+LGY L+KDG+ +++PLEKF S VAGR+FHNGRF+Q +R+K ASL NV LEQGTVTSL+EENG VKGVQYK++SG+ L AYAPLTIVCDGCFSNLRR+LCSPKVD+PS FVG +L NC LP N+G +I+A+PSPI+FY Sbjct: 76 LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLQDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHPNHGHVILANPSPILFY 270
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Match: C5WRR5_SORBI (Putative uncharacterized protein Sb01g042050 OS=Sorghum bicolor GN=Sb01g042050 PE=4 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 2.730e-97 Identity = 141/195 (72.31%), Postives = 168/195 (86.15%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKDGRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV++IDAQR+LGY L+KDG+ +++PLEKF S VAGR+FHNGRF+Q +R+K ASL NV LEQGTVTSL+EENG VKGVQYK++SG+ L AYAPLTIVCDGCFSNLRR+LCSPKVD+PS FVG +L NC LP N+G +I+A+PSPI+FY Sbjct: 78 LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHPNHGHVILANPSPILFY 272
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Match: B6U6N2_MAIZE (Squalene monooxygenase OS=Zea mays PE=2 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 2.876e-97 Identity = 141/195 (72.31%), Postives = 168/195 (86.15%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKDGRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV++IDAQR+LGY L+KDG+ +++PLEKF S VAGR+FHNGRF+Q +R+K ASL NV LEQGTVTSL+EENG VKGVQYK++SG+ L AYAPLTIVCDGCFSNLRR+LCSPKVD+PS FVG +L NC LP N+G +I+A+PSPI+FY Sbjct: 88 LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLQDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHPNHGHVILANPSPILFY 282
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Match: K7VKB3_MAIZE (Squalene monooxygenase OS=Zea mays GN=pco148653 PE=4 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 2.894e-97 Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKDGRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV++IDAQR+LGY L+KDG+ +++PLEKF S VAGR+FHNGRF+Q +R+K ASL NV LEQGTVTSL+EENG VKGVQYK++SG+ L AYAPLTIVCDGCFSNLRR+LCSPKVD+PS F+G +L NC LP N+G +I+A+PSPI+FY Sbjct: 83 LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLQDCVEEIDAQRVLGYALFKDGRNTKLAYPLEKFHSDVAGRSFHNGRFIQRMRQKAASLPNVQLEQGTVTSLLEENGTVKGVQYKTKSGEELKAYAPLTIVCDGCFSNLRRALCSPKVDVPSCFIGLVLENCQLPHPNHGHVILANPSPILFY 277
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG16_ARATH (Squalene epoxidase 3 OS=Arabidopsis thaliana GN=SQE3 PE=1 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 2.395e-94 Identity = 133/195 (68.21%), Postives = 163/195 (83.59%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LA++LGK+GRRV VIERDL P+R+ GE L PGGYLKLIELGL DCV DIDAQR+LGY L+KDGK +S+PL++F S VAGR+FHNGRFVQ +R+K + L NV +EQGTVTSL+EENGI+KGVQYK++ GQ L ++APLTIVCDGCFSNLRRSLC PKV++PS FVG +L NC LP N+G +++ PSPI+FY Sbjct: 69 LAHTLGKEGRRVHVIERDLTEPDRIVGELLQPGGYLKLIELGLEDCVKDIDAQRVLGYALFKDGKHTKLSYPLDQFDSDVAGRSFHNGRFVQRMREKASLLPNVRMEQGTVTSLVEENGIIKGVQYKTKDGQELKSFAPLTIVCDGCFSNLRRSLCKPKVEVPSNFVGLVLENCELPFPNHGHVVLGDPSPILFY 263
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 5.592e-91 Identity = 135/195 (69.23%), Postives = 161/195 (82.56%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L DGRRV VIERDL +R+ GE L PGGYLKLIELGL DCV++IDAQR+ GY LY DGK +S+PLEKF S VAGR+FHNGRFVQ +R+K ASL NV +EQGTVTSL+E+ G VKGVQYK++ GQ L+A+APLTIVCDGCFSNLRRSLC+PKV++PS FVG IL N +LP N+G +I+A PSPI+FY Sbjct: 89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFVQRMREKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQELSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSPILFY 283
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG14_ARATH (Squalene epoxidase 1 OS=Arabidopsis thaliana GN=SQE1 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 5.347e-89 Identity = 126/195 (64.62%), Postives = 163/195 (83.59%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+LGKD RRV VIERDL+ P+R+ GE L PGGYLKL+ELG+ DCV++IDAQR+ GY L+K+GK +++PLEKF V+GR+FHNGRF+Q +R+K ASL NV LEQGTV SL+EENG +KGV+YK+++G+ TA+A LTIVCDGCFSNLRRSLC+P+V++PS FVG +L NCNLP N+G +++A PSPI+ Y Sbjct: 75 LAYTLGKDKRRVHVIERDLSEPDRIVGELLQPGGYLKLLELGIEDCVEEIDAQRVYGYALFKNGKRIRLAYPLEKFHEDVSGRSFHNGRFIQRMREKAASLPNVQLEQGTVLSLLEENGTIKGVRYKNKAGEEQTAFAALTIVCDGCFSNLRRSLCNPQVEVPSCFVGLVLENCNLPYANHGHVVLADPSPILMY 269
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG15_ARATH (Squalene epoxidase 2, mitochondrial OS=Arabidopsis thaliana GN=SQE2 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.754e-88 Identity = 125/195 (64.10%), Postives = 156/195 (80.00%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LA++LGK+GRRV VIERD + +R+ GE L PGGYLKLIELGL DCV IDAQR+LGY L+KDGK +++PLE F S VAGR+FHNGRFVQ +R+K +L NV LEQGTVTSL+EE+G +KGV+Y+++ G ++APLTIVCDGCFSNLRRSLC PKVD+PS FVG +L NC LP N+G +++ PSPI+ Y Sbjct: 137 LAHTLGKEGRRVHVIERDFSEQDRIVGELLQPGGYLKLIELGLEDCVKKIDAQRVLGYVLFKDGKHTKLAYPLETFDSDVAGRSFHNGRFVQRMREKALTLSNVRLEQGTVTSLLEEHGTIKGVRYRTKEGNEFRSFAPLTIVCDGCFSNLRRSLCKPKVDVPSTFVGLVLENCELPFANHGHVVLGDPSPILMY 331
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene epoxidase 5 OS=Arabidopsis thaliana GN=SQE5 PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 5.609e-67 Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEK--FQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L KDGRRV VIERDL P R+ GE + PGG L L +LGL DC++ IDAQ+ G T+YKDGKEA SFP++ F + R+FHNGRFVQ LR+K +SL NV LE+GTV SLIEE G++KGV YK+ +G+ TA APLT+VCDGC+SNLRRSL ++ SY VGFI NC L +I++ PS + Y Sbjct: 60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTVVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSFTMLY 256
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene epoxidase 6 OS=Arabidopsis thaliana GN=SQE6 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.218e-65 Identity = 110/198 (55.56%), Postives = 137/198 (69.19%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEK--FQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSP-KVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L KDGRRV VIERD+ P RM GE + PGG L L +LGL DC++DIDAQ+ G +YKDGKEA FP++ F + R+FHNGRFVQ LR+K SL NV LE+GTV SL+EE G+VKGV YK++ G+ TA APLT+VCDGC+SNLRRSL +I SY VG+I NC L +I++ PS + Y Sbjct: 60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRKAFSLSNVRLEEGTVKSLLEEKGVVKGVTYKNKEGEETTALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPSFTMVY 257
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.224e-65 Identity = 108/196 (55.10%), Postives = 138/196 (70.41%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLE-KFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L KDGRRV VIERD+ P RM GE + PGG L L +LGL DC+++IDAQ+ G L+KDGKE FP++ F +GR FHNGRFVQ LR+K +SL NV LE+GTV SLIEE G+VKGV YK+ SG+ T++APLT+VCDGC SNLRRSL ++ +Y +G+I NC L + +I+A PS + Y Sbjct: 63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFVQRLRQKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETTSFAPLTVVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLIMAKPSFAMLY 258
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 6.996e-62 Identity = 104/196 (53.06%), Postives = 135/196 (68.88%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEK-FQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L KDGRRV VIERD+ P RM GE + PGG L L +LGL DC++ ID Q G +YKDG++A VSFP + F GR F+NGRFVQ LR+K +SL V LE+GTV SLIEE G++KGV YK+ +G+ TA+APLT+VCDGC+SNLRRS+ ++ SY VG++ NC L +I++ PS + Y Sbjct: 62 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFVQRLRQKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAFAPLTVVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQLEDPEKLKLIMSKPSFTMLY 257
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene epoxidase 4 OS=Arabidopsis thaliana GN=SQE4 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 9.185e-61 Identity = 104/196 (53.06%), Postives = 129/196 (65.82%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLYKDGKEAHVSFPLEK-FQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKSESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LAY+L KDGRRV VIERDL P R GE + GG L +LGL DC++DIDAQ +YKDGK A + FP +K F GR NGR VQ LR+K ASL NV LE+GTV SLIEE G+VKGV YK+ +G+ +TA+APLT+VCDGC+SNLRRSL ++ SY VG++ N L + +I + P V Y Sbjct: 58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLIFSKPLVCVIY 253
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 2.147e-48 Identity = 89/198 (44.95%), Postives = 126/198 (63.64%), Query Frame = -1 Query: 1 LAYSLGKDGRRVRVIERDLNAPNRMAGESLIPGGYLKLIELGLVDCVDDIDAQRLLGYTLY--KDGKEAHVSFPLEKFQSHVAGRTFHNGRFVQSLRKKVASLHNVSLEQGTVTSLIEENGIVKGVQYKS-ESGQVLTAYAPLTIVCDGCFSNLRRSLCSPKVDIPSYFVGFILTNCNLPIKNYGAIIVAHPSPIVFY 585 LA L +DGR+V VIERDL P+R+ GE L PGGY L +LGL D V+ +DAQ + GY ++ + E + +PL + +GR FH+GRF+ SLRK + N +G V L+EE+ +V GVQYK E+G + +APLT+V DG FS R+SL S KV + S+FVGF++ N N+ +I+A+PSP++ Y Sbjct: 138 LAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKELHAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIY 335 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001666 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 17
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001666 ID=g.arboreum_cottongen_reftransV1_0001666; Name=g.arboreum_cottongen_reftransV1_0001666; organism=Gossypium arboreum; type=contig; length=750bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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