g.arboreum_cottongen_reftransV1_0003394, g.arboreum_cottongen_reftransV1_0003394 (contig) Gossypium arboreum
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Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A0D2PVP2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G157300 PE=4 SV=1) HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0 Identity = 291/298 (97.65%), Postives = 292/298 (97.99%), Query Frame = 1
Query: 34 MEPXXXXXXXXXXXNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLNQQQIVTDKDNSQGSKQ 927
MEPKGK KGKGKGSNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALAAAGASVCAQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQ SEQSTSASNFGNENSNHIH NYGFQGLEFPN+NMGFVSFSSLLNGSN QVPGLELGLSQDPHFGVSNSQAFSHFY QIGQQRGGVRPLNQQQIV DKDNSQGSKQ
Sbjct: 1 MEPKGKGKGKGKGSNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALAAAGASVCAQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQVSEQSTSASNFGNENSNHIHHNYGFQGLEFPNMNMGFVSFSSLLNGSNLQVPGLELGLSQDPHFGVSNSQAFSHFYQQIGQQRGGVRPLNQQQIVADKDNSQGSKQ 298
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A0B0NCD0_GOSAR (Transcription factor TCP20-like protein OS=Gossypium arboreum GN=F383_16179 PE=4 SV=1) HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0 Identity = 300/357 (84.03%), Postives = 307/357 (85.99%), Query Frame = 1
Query: 34 MEPXXXXXXXXXXXNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLNQQQIVTDKDNSQGSKQ*LVFLNNNKMMTTTGQPDYILRSLTRN*R*NDF*TVQFAGMSCEENNNGQEIGFTSAAC 1104
MEPKGKSKGKGKGSNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALAAAGASVCAQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRG + + D D+ ++ + FL+ Q MSCEENNNGQEIGFTSAAC
Sbjct: 1 MEPKGKSKGKGKGSNHHPQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALAAAGASVCAQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGIQAVASLSKQQQDDDDDWSTRLYIAFLD------------------------------QKLKMSCEENNNGQEIGFTSAAC 327
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A061E406_THECC (Teosinte branched 1 isoform 1 OS=Theobroma cacao GN=TCM_008601 PE=4 SV=1) HSP 1 Score: 443.351 bits (1139), Expect = 2.923e-151 Identity = 236/289 (81.66%), Postives = 253/289 (87.54%), Query Frame = 1
Query: 76 NHHPQEVPTCLTPQK----AENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLNQQQIVTDKDNSQGSKQ 927
NHHPQEVPT L P + AENNKPAEIKN QIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPASALAAAG SV QGNSV AGLHTK+ GLG+ GS+DRNNW+M+ GN+ RS IPSGAW S NGI SG Q S Q TSASNFG+ENSN+I + YGF GLEFP++NMGFVSFSSLLNGSN QVPGLELGLSQDPHFGV NSQAFS FY Q+GQQRGGV LNQQQ ++DKD+SQGSKQ
Sbjct: 7 NHHPQEVPTFLIPPQKANMAENNKPAEIKNFQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGTSVSEQGNSVPAGLHTKIEGLGSGIGSRDRNNWSMMSGNIERSHIPSGAWPSINGIASGFAQGSGQLTSASNFGSENSNNIPK-YGFHGLEFPHMNMGFVSFSSLLNGSNQQVPGLELGLSQDPHFGVLNSQAFSQFYQQMGQQRGGVGSLNQQQQLSDKDDSQGSKQ 294
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A067H2M9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023883mg PE=4 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 2.908e-116 Identity = 194/273 (71.06%), Postives = 219/273 (80.22%), Query Frame = 1
Query: 121 AENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNEN-SNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLN----QQQIVTDKDNSQGS 921
AENNKP EIK+ QIMIA+KDD+ K+LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPAS LAAAGASV QGNSVSAGLHTK+ GLG GS +R NW M+ N GRSQIPSG W + NG GSG +Q S Q T SNFG+EN S + +GF G+EFPN+NMG +SFSS+L+G++ Q+PGLELGLSQD H GV NSQA S FY Q+G R LN QQ ++DKD+SQGS
Sbjct: 2 AENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLT--SNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGS 272
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: V4VFG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032374mg PE=4 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 1.912e-115 Identity = 192/272 (70.59%), Postives = 218/272 (80.15%), Query Frame = 1
Query: 121 AENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLN----QQQIVTDKDNSQGS 921
AENNKP EIK+ QIMIA+KDD+ K+LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPAS LAAAGASV QGNSVSAGLH K+ GLG GS +R NW M+ N GRSQIPSG W + NG GSG +Q S Q T SNFG+EN + + +GF G+EFPN+NMG +SFSS+L+G++ Q+PGLELGLSQD H GV NSQA S FY Q+G R LN QQ ++DKD+SQGS
Sbjct: 2 AENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHAKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLT--SNFGSENLS-ANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGS 270
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: B9RMA7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1078980 PE=4 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.424e-114 Identity = 201/298 (67.45%), Postives = 230/298 (77.18%), Query Frame = 1
Query: 76 NHHPQEVPTCLTPQKAE--------NNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLGACTGSKDRNNWAMLGGNLGRSQIPSGAW-SSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLNQQQIVT----DKDNSQGSKQ 927
N H Q++PT L P + E ++K AEIK+ QIMIA+KDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPASALAAAGASV QGNSVSAGLH+KM G+G GS+DR NW M+ NLGR + +G W SS GIG+G + S Q SA NFGNE++N + + +GF G+E PNINMG +SF S+ N +N QVPGLELGLSQD H GV NSQA S FY Q+GQ R G+ L QQQ DKD+SQGS+Q
Sbjct: 8 NPHKQDLPTFLNPLQKETMAENSSSSSKTAEIKDFQIMIANKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQGNSVSAGLHSKMEGIGPSVGSRDRANWTMMNSNLGRCNVTNGMWPSSVGGIGAGYISNSSQ--SAMNFGNESANALPK-FGFHGVELPNINMGLMSFYSMFNATNQQVPGLELGLSQDGHTGVMNSQALSQFYQQMGQNRTGLNSLVQQQQHQQQPPDKDDSQGSRQ 302
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A067K4V4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18002 PE=4 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 2.746e-107 Identity = 191/279 (68.46%), Postives = 216/279 (77.42%), Query Frame = 1
Query: 121 AENNKPAEIKNLQIMIASKDD-NKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQR-GGVRPLNQQQIVT-------DKDNSQGSKQ 927
AENNKP+EIK+ QIMI++KDD NKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPASALAAAGASV Q NSVS GL TKM GLG GS++R NW M+ NLGRS + + W S GIG+G + S Q SA+NFGNE+S +GF G+EFPNINMG +S S+ +G+N Q PGLELGLSQD + GV NSQA S FY Q+GQ R G+ NQQQ DKD+SQGS+Q
Sbjct: 2 AENNKPSEIKDFQIMISNKDDSNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQENSVSTGLQTKMEGLGQTIGSRERANWTMMTSNLGRSNLSAAVWPSVGGIGTGFISNSGQ--SATNFGNESS-----KFGFHGIEFPNINMGLMSVYSMFSGANQQFPGLELGLSQDGNIGVLNSQALSQFYQQMGQSRPAGLNSFNQQQQQQQQEEQPPDKDDSQGSRQ 273
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: B9GZD6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16630g PE=4 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 3.574e-103 Identity = 188/286 (65.73%), Postives = 218/286 (76.22%), Query Frame = 1
Query: 85 PQEVPTCLTPQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKM-GLG-ACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQRGGVRPLN---QQQIVTDKDNSQGSKQ 927
PQE + NNKPA+I++ Q M+A KDD+KK+LAPKRSSNKDRHKKV+GRGRRIR+PALCAARIFQLTREL HKSDGETIQWLLQQ+EPSIIAATGTGTIPASALAAAGASV QG SVS GLH KM GLG TGS+DRN+W + LG S + +G W S GIG G V S QST SNFGNENS+ + + YGFQG+EFPNINMG +SF S+ +G+N Q+PGLELGLSQD H + N QA S FY Q+ Q RG + LN QQ+ DKD+SQGS+Q
Sbjct: 20 PQEASMSENNINSNNNKPADIEDFQNMMADKDDSKKKLAPKRSSNKDRHKKVEGRGRRIRIPALCAARIFQLTRELEHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSEQGGSVSTGLHAKMEGLGPGVTGSRDRNDWTLSNTKLGISNVATGVWPSVGGIGLGFVPNSGQST--SNFGNENSSTLPK-YGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELGLSQDGHSAMLNPQALSPFYHQMVQGRGVLDSLNQEKQQEQPPDKDDSQGSRQ 302
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: A0A059D9A1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03529 PE=4 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 3.320e-93 Identity = 165/275 (60.00%), Postives = 204/275 (74.18%), Query Frame = 1
Query: 115 QKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSA-SNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQ-AFSHFYPQIGQQRGG--VRPLNQQQIVTDKDNSQGSKQ 927
Q + P+EIK+ QI+IASKD++KKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHK+DGETIQWLLQQ+EPSI+AATGTGT+PASAL AAG+SV QG+SVSA + G+G G R N A+ GN RSQ+ SG W +GI GLV +QS + +N G E+SN++ + +GFQG+EFPN+N+G +SF + L+GSN ++PGLELGLSQD H GV NS + S + Q+GQ GG V + QQ T D GS++
Sbjct: 10 QHQKEKNPSEIKDFQIVIASKDESKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKTDGETIQWLLQQAEPSIVAATGTGTVPASALNAAGSSVSEQGSSVSAKMEGLAGVGPLLGFGGRTNLAISNGNFSRSQVVSGVWPPVSGIRPGLVHYPDQSAAVGANIGGESSNYVSK-FGFQGVEFPNMNVGLISFPTFLSGSNQRMPGLELGLSQDGHGGVLNSHSSLSQIFQQMGQSGGGETVSVGHHQQQQTPDDEGDGSQE 283
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Match: F6H463_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01690 PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 6.491e-92 Identity = 166/265 (62.64%), Postives = 193/265 (72.83%), Query Frame = 1
Query: 82 HPQEVPTCLT---PQKAENNKPAEIKNLQIMIASKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTK---MGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNINMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAFSHFYPQIGQQR 858
PQEVP L+ P EN KPAE+K+ QI+IA K++ KKQLAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQ+EPSIIAATGTGTIPASALAAAG SV QG S+SAGLH K +G + R +WAM+G NLGR + +G W +G G S S +N GNE+SN++ Q F G + P N+G +SF+S+L GSN Q+PGLELGLSQD H GV NSQA S Y Q+GQ R
Sbjct: 8 QPQEVPNFLSLPQPNMGEN-KPAEVKDFQIVIADKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSISAGLHQKIDELGGSSIGSGSSRTSWAMVGANLGRPHVATGLWPPVSGFGF----QSSSGPSTTNLGNESSNYL-QKIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLNSQALSQIYQQMGQAR 266
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.976e-30 Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 1
Query: 217 NKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIP 402
KDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETI+WLLQQ+EP+I+AATGTGTIP
Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTIP 213
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: TCP7_ARATH (Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.962e-30 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1
Query: 205 KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIP 402
K+ KDRH KVDGRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+Q+EPSIIAATGTGT P
Sbjct: 35 KKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTP 100
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 8.551e-30 Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 1
Query: 205 KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIP 402
KR S KDRH KVDGRGRRIRMPA+CAAR+FQLTREL HKSDGETI+WLLQQ+EP+IIAATGTGTIP
Sbjct: 52 KRPS-KDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIP 116
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.300e-28 Identity = 49/72 (68.06%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 190 KQLAPKRS-SNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIP 402
+++ P++S S+ DRH KV GRGRR+R+PA+ AAR+FQLTRELGH++DGETI+WLL+Q+EPSIIAATGTG P
Sbjct: 46 RRVRPRKSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAEPSIIAATGTGVTP 117
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: TCP6_ARATH (Transcription factor TCP6 OS=Arabidopsis thaliana GN=TCP6 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.055e-25 Identity = 78/208 (37.50%), Postives = 100/208 (48.08%), Query Frame = 1
Query: 205 KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPXXXXXXXXXXXXXQGNSVSAGLHTKMGLGACTGSKDRNNWAMLGGNLGRSQIPSGAWSSSNGIGSGLVQASEQSTSASNFGNENSNHIHQNYGFQGLEFPNI-NMGFVSFSSLLNGSNPQVPGLELGLSQDPHFGVSNSQAF 825
K+ NKDRH KV+GRGRR+R+P LCAARI+QLT+ELGHKSDGET++WLLQ +EPSI++AT G P SV + L C ++ + M +G W + G Q+ + NYG G +F + +GF G N Q PGLEL LSQ GV N Q F
Sbjct: 64 KKKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAEPSILSATVNGIKPT--------------ESVVSQPPLTADLMICHSVEEASRTQMEA---------NGLWRNETG----------QTIGGFDL----------NYGI-GFDFNGVPEIGF--------GDN-QTPGLELRLSQ---VGVLNPQVF 215
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: TCP11_ARATH (Transcription factor TCP11 OS=Arabidopsis thaliana GN=TCP11 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.140e-25 Identity = 47/60 (78.33%), Postives = 53/60 (88.33%), Query Frame = 1
Query: 217 NKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGT 396
KDRH KV+GR RR+ MPAL AARIFQLTRELGHK++GETI+WLL Q+EPSIIAATG GT
Sbjct: 43 TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT 102
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Match: TCP16_ARATH (Transcription factor TCP16 OS=Arabidopsis thaliana GN=TCP16 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.419e-18 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 208 RSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTG 393
R + KDRH K+ GR RRIR+P A ++F+LT+ELG K+DGET+ WLLQ +EP+I AATG G
Sbjct: 14 RRTPKDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNAEPAIFAATGHG 75 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0003394 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 17
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Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0003394 ID=g.arboreum_cottongen_reftransV1_0003394; Name=g.arboreum_cottongen_reftransV1_0003394; organism=Gossypium arboreum; type=contig; length=1293bpback to top |