g.arboreum_cottongen_reftransV1_0001886, g.arboreum_cottongen_reftransV1_0001886 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A067F3C0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036563mg PE=3 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 4.968e-138 Identity = 194/233 (83.26%), Postives = 212/233 (90.99%), Query Frame = 2 Query: 197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MA+R+VT+NL R+ P L S SLLHSHATSFGFKEV EEKSQ+V VFS+VA NYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRIL++VNSIKRRALQD L DDLQEETRIYVCDINPNML+VGK RALE+G DKSL+WV+GDAEAL FED++MDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHVDIPVFKELYD+YSFSVIP +G Sbjct: 1 MAVRVVTRNLGSRLLPMLSSTSLLHSHATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A061GXT8_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_039314 PE=3 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 7.871e-138 Identity = 205/233 (87.98%), Postives = 217/233 (93.13%), Query Frame = 2 Query: 197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MALRLVT N +IS L SASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYD+MND MS GLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILES++SI+RRALQDPLND LQEET+IYVCDINPNML+VGK RA+E+GLGEDKSL WVQGDAE LSF DNSMDGYTIAFGIRNVTHIEKVL EA RVLKRGGRFLCLELSHV++PVFKELYDFYSFSVIP+LG Sbjct: 1 MALRLVTNNFRSKISSMLSSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDIMNDLMSAGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESISSIRRRALQDPLNDGLQEETQIYVCDINPNMLNVGKKRAVERGLGEDKSLTWVQGDAEVLSFGDNSMDGYTIAFGIRNVTHIEKVLDEANRVLKRGGRFLCLELSHVEVPVFKELYDFYSFSVIPQLG 233
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2QY40_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=3 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 5.036e-135 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 2 Query: 326 MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG Sbjct: 1 MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 190
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: D7T7K9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01590 PE=3 SV=1) HSP 1 Score: 389.808 bits (1000), Expect = 2.146e-132 Identity = 179/233 (76.82%), Postives = 209/233 (89.70%), Query Frame = 2 Query: 197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MALR + N+ ++ P + SLLHSHATSFGFKEV+EEEKSQMVG VF++VAS+YDLMND MSGGLHRLWKDRLVSKL PFPGMKHLDVAGGTGDVAF+ILE++N +K R + + D+LQEET+IY+CDINP MLDVGK RA+E+GLG+D +L+W++GDAEALSF+D+SMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHV+IPVFKELYD+YSFSVIP +G Sbjct: 1 MALRTASMNMRNKLLPMFSATSLLHSHATSFGFKEVQEEEKSQMVGNVFTSVASSYDLMNDLMSGGLHRLWKDRLVSKLHPFPGMKHLDVAGGTGDVAFKILETINKMKLRTMHNVPEDELQEETQIYICDINPRMLDVGKKRAMEQGLGKDPTLLWLEGDAEALSFDDDSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVEIPVFKELYDYYSFSVIPAMG 233
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A068V646_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_119 OS=Coffea canephora GN=GSCOC_T00017310001 PE=3 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 5.333e-132 Identity = 183/233 (78.54%), Postives = 209/233 (89.70%), Query Frame = 2 Query: 200 ALRLVTKNLS-GRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 ALR +T+ + ++ S +LHSHATSFG+KEVREEEKSQMVG VF++VASNYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRILES+NS+KRRALQD D+L EET+I+VCDINPNML+VGK RA E+GL ED++LVWV+GDAEAL+FEDNSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHV++P+FKELYD YSFSVIP +G Sbjct: 4 ALRSLTRAMRRSKLLSMYSSGYMLHSHATSFGYKEVREEEKSQMVGNVFTSVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILESINSVKRRALQDSPEDNLLEETQIFVCDINPNMLNVGKKRAQERGLAEDRALVWVEGDAEALNFEDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVEVPIFKELYDLYSFSVIPAVG 236
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: B9SNZ3_RICCO (Ubiquinone/menaquinone biosynthesis methyltransferase, putative OS=Ricinus communis GN=RCOM_0440510 PE=3 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 6.291e-132 Identity = 182/231 (78.79%), Postives = 208/231 (90.04%), Query Frame = 2 Query: 203 LRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 +RL + L + L S S LHSHATSFGFKEV+EEEKS+MV VFSNVASNYDLMND MSGGLHRLWKDRLVSKL+PFPG++H+DVAGGTGD+AFRILE+VNS + RA++DPLND LQEET+IYVCDINPNML+VG+ RA+E+G GEDK LVWV+GDAEALSF D+SMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHV+IP+FKELYD+YSFS+IP LG Sbjct: 1 MRLASTKLGRKCFHMLSSTSRLHSHATSFGFKEVQEEEKSRMVNNVFSNVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGIRHVDVAGGTGDIAFRILETVNSTRYRAIRDPLNDHLQEETQIYVCDINPNMLNVGRKRAIERGFGEDKCLVWVEGDAEALSFPDDSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVEIPMFKELYDYYSFSIIPALG 231
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: W9SUN1_9ROSA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Morus notabilis GN=L484_009209 PE=3 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 4.219e-131 Identity = 178/216 (82.41%), Postives = 202/216 (93.52%), Query Frame = 2 Query: 248 LCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 SA+ LHSHATSFGFKEV+E+EKSQMVG VFS+VASNYDLMND MS GLHRLWKDRLVS+L+PFPGMKHLDVAGGTGDVAFRILES+NS +RRALQD D LQEET+IYVCDINPNML+VGK RA+E+GLGE++SL+WV+GDAEAL+F++NSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHVDIPVFK+LYD+YSFS+IP +G Sbjct: 2 FSSANALHSHATSFGFKEVKEDEKSQMVGNVFSSVASNYDLMNDLMSAGLHRLWKDRLVSELNPFPGMKHLDVAGGTGDVAFRILESINSTRRRALQDVSEDGLQEETQIYVCDINPNMLNVGKKRAMERGLGENQSLIWVEGDAEALTFDNNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKDLYDYYSFSIIPAVG 217
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A059AM94_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01084 PE=3 SV=1) HSP 1 Score: 385.571 bits (989), Expect = 1.113e-130 Identity = 179/235 (76.17%), Postives = 205/235 (87.23%), Query Frame = 2 Query: 197 MALRLVTKNL--SGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MALR++ + L ++ P SASLLHSHATSFGFKEVREE+KSQ+VG VF++VAS YDLMND MS GLHRLWKDRLVSKL PFPGMKHLDVAGGTGDVAFRILE +NS + RALQD D L EET+IY+CDINPNML+VGK RA+E+G G++K+L WV+GDAEAL FEDNSMDGYTIAFGIRNVTHIEK L+EA+RVL+RGGRFLCLELSHVD P+FKELYD+YSFSVIP +G Sbjct: 1 MALRMIARRLRLQSKLRPMFSSASLLHSHATSFGFKEVREEDKSQLVGNVFTSVASTYDLMNDLMSAGLHRLWKDRLVSKLHPFPGMKHLDVAGGTGDVAFRILEDINSTRHRALQDATEDYLHEETQIYICDINPNMLNVGKKRAIERGFGDNKALRWVEGDAEALKFEDNSMDGYTIAFGIRNVTHIEKALAEAHRVLRRGGRFLCLELSHVDTPIFKELYDYYSFSVIPAMG 235
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: K4AY39_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g081470.2 PE=3 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 1.313e-130 Identity = 186/236 (78.81%), Postives = 207/236 (87.71%), Query Frame = 2 Query: 188 CRGMALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 R +A L KNLS C AS L SHATSFGFK+V EEEKS+MVG VF++VASNYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRILE++ ++KRRA+QD L+DD+ EETRIYVCDINPNML VGK RA ++G G +KSLVWV+GDAEALSFEDNSMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHVDIPV+K+LYD YSFSVIP +G Sbjct: 5 VRSVARSLRRKNLSS----MYCPASTLQSHATSFGFKDVAEEEKSKMVGNVFTSVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILENIKNVKRRAMQDVLDDDMIEETRIYVCDINPNMLGVGKKRAEQRGFGLEKSLVWVEGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVDIPVYKDLYDVYSFSVIPAVG 236
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0A0LXL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086890 PE=3 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 8.708e-130 Identity = 181/233 (77.68%), Postives = 206/233 (88.41%), Query Frame = 2 Query: 197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MALR VT+ + + P SA+LLHSHATSFGFKEV EEEKS++VG VFSNVASNYDLMND MSGGLHRLWKDRLVS+L+PFPGM HLDVAGGTGDVAFRIL+ +N +KRRA+QD DDLQE+T++YVCDINP+ML VGK RA E+GLGE SL+WV+GDAEALSF DNSMDGYTIAFGIRNVTHIEKVL EAYRVL+RGGRFLCLELSHV+ P+FKELYD+YSFS+IP +G Sbjct: 112 MALRSVTRRIGSKFFPMFSSANLLHSHATSFGFKEVPEEEKSRLVGNVFSNVASNYDLMNDLMSGGLHRLWKDRLVSELNPFPGMNHLDVAGGTGDVAFRILDRINDVKRRAMQDVREDDLQEQTQVYVCDINPHMLSVGKKRATERGLGEGGSLIWVEGDAEALSFPDNSMDGYTIAFGIRNVTHIEKVLDEAYRVLRRGGRFLCLELSHVEAPLFKELYDYYSFSIIPAVG 344
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ARATH (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 3.154e-125 Identity = 176/233 (75.54%), Postives = 203/233 (87.12%), Query Frame = 2 Query: 197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 MALR V++ L RI + + LHSHATSFGF+EV+EEEKS++VG VF+NVAS+YD+MND MSGGLHRLWK+RLV KLSPF GMKHLDVAGGTGDVAFRI ++V S+KRRALQ +++ EET+IYVCDINPNML+VGK RA E+GL ++KSLVWV+GDAEALSF+DNSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHV+IPVFK LYD YSF VIP LG Sbjct: 1 MALRSVSRRLGSRILNQRSFVASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQ-KVDEASLEETQIYVCDINPNMLNVGKQRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVEIPVFKNLYDLYSFQVIPNLG 232
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ORYSJ (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 7.379e-120 Identity = 170/236 (72.03%), Postives = 196/236 (83.05%), Query Frame = 2 Query: 191 RGMALRLVTKNLSGRISPKLC-SASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 R A RL + + +SP + LHSHATSFG+K+V EE+KS++VG VFS+VAS+YDLMND MS GLHRLWKDRL+SKL+PFPGMKHLDVAGGTGDVAFR LE +NS+ RA+Q L D ++EET+IYVCDINPNML+VGK RA E+G E L W+QGDAEALSFED SMDGYTIAFGIRNVTHIEK LSEAYRVLKRGGRFLCLELSHVD+P+FKE+YD YSFSVIP +G Sbjct: 4 RSAAGRLASSSRRRLLSPPTSIHTAFLHSHATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTLTD-IEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLELSHVDVPLFKEIYDVYSFSVIPAVG 238
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_XENLA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Xenopus laevis GN=coq5 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 2.646e-69 Identity = 117/223 (52.47%), Postives = 146/223 (65.47%), Query Frame = 2 Query: 281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL--NDDL-----------QEE-----TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 T FGF+ V EEEK + V KVF NVA NYD+MND MS G+HR WKD L+ + P PGM+ LD+AGGTGD++FR + + + + + ++ L DL +EE +R +CDIN ML VG ++L LG + L WV GDAE L F D+ D YTIAFGIRNVTHIE+ L EAYRVLK GGRFLCLE SHV+ P+ ++YD YSF VIP LG Sbjct: 34 THFGFQAVSEEEKRERVYKVFENVAHNYDIMNDAMSLGVHRFWKDWLLQLMKPTPGMQLLDMAGGTGDISFRFINYIRAQREKWIRQELKFQQDLSWPDISKTYQNKEEGSLMGSRAVICDINKEMLKVGLQKSLR--LGYSEGLSWVAGDAEELPFGDDKFDVYTIAFGIRNVTHIEQALQEAYRVLKPGGRFLCLEFSHVNNPLLSKIYDVYSFQVIPVLG 254
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_HUMAN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Homo sapiens GN=COQ5 PE=1 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 3.247e-69 Identity = 123/237 (51.90%), Postives = 151/237 (63.71%), Query Frame = 2 Query: 248 LCSASLL----HSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 L SA LL + T FGF+ V EEEK V +VF +VA YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L V S +R A Q+ +++ +E +R+ VCDIN ML VGK +AL +G L WV GDAE L F+D+ D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+ LYD YSF VIP LG Sbjct: 37 LLSARLLSQEKRAAETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_BOVIN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Bos taurus GN=COQ5 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.687e-69 Identity = 125/258 (48.45%), Postives = 157/258 (60.85%), Query Frame = 2 Query: 173 KAGNRCRGMALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 +A + CR LR + + G + +L S + T FGF+ V EEEK V +VF +VA YD+MND MS G+HR+WKD L+ K+ PFPG + LDVAGGTGD+AFR L V + ++R L+ N +E R Y VCDIN ML +GK +A + G L W+ GDAE L F+DN D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+ LYD YSF VIP LG Sbjct: 19 RAVSGCRLPGLR--SSSPRGPLGARLLSQEK-EATETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEMLKIGKQKA--RAQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLLSRLYDVYSFQVIPVLG 271
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.709e-68 Identity = 121/250 (48.40%), Postives = 155/250 (62.00%), Query Frame = 2 Query: 203 LRLVTKNLSGR--ISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNS-------IKRRALQDPLNDDLQ----------EETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 LR +K L R I+ + + +T FGF+ V EEEK++ V KVF +VA YD+MND MS G+HRLWKD L+ ++P PG++ LD AGGTGD++FR LE S ++ ++ Q P D+ ++R VCDIN ML VGK RA + G+ L WV GDAE L F+D+ D YTIAFGIRNVTHIE+ L EA+RVLK GGRF+CLE S V P+ LYD YSF +IP LG Sbjct: 24 LRCRSKYLCRRAAITARRGYSDSTEGRSTHFGFQTVPEEEKAEKVYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGI--TTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCLEFSKVTNPLLARLYDAYSFQMIPVLG 271
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_CHICK (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Gallus gallus GN=COQ5 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.918e-68 Identity = 117/223 (52.47%), Postives = 143/223 (64.13%), Query Frame = 2 Query: 281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL-----------NDDLQEE-------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 T FGF+ V E E+ + + +VF NVA YD+MND MS G+HR+WKD LV K++P PG +DVAGGTGD+AFR L V S++ R LQ L + QEE +++ VCDIN ML GK +A + LG + L WV G+AE L F+D+ D YTIAFGIRNVT I+ L EAYRVLK GGRFLCLE SHV P+ LYD YSF VIP LG Sbjct: 35 THFGFQNVSEAERREKIYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEMLKAGKQKA--QHLGYSEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLALQEAYRVLKPGGRFLCLEFSHVSNPLLSRLYDLYSFQVIPVLG 255
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_RAT (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Rattus norvegicus GN=Coq5 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.408e-68 Identity = 118/222 (53.15%), Postives = 141/222 (63.51%), Query Frame = 2 Query: 281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 T FGF+ V E+EK V +VF +VA YDLMND MS G+HR WKD L+ K+ P PG + LDVAGGTGD+AFR L V + +RR L+ N +E R Y VCDIN ML VGK +AL +G L WV GDAE L F+D+ D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+ LYD YSF VIP +G Sbjct: 52 THFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREMLKVGKQKALARG--HTAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQEAHRVLKPGGRFLCLEFSQVNDPLISRLYDLYSFQVIPVIG 271
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_PONAB (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Pongo abelii GN=COQ5 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 6.049e-68 Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 2 Query: 224 LSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 LS R+ P+ A+ H FG + V EEEK V +VF +VA YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L V S +R A Q+ +++ +E +R+ +CDIN ML VGK +AL +G L WV GDAE L F+D+ D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+ LYD YSF VIP LG Sbjct: 38 LSARLLPQEKRATETH-----FGSETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: UBIE_BRUME (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=ubiE PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 9.373e-67 Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 2 Query: 284 SFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPF--PGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895 SFGFK V E EK +V VF VA YD+MND MS G+HR+WKD +V+ L+P PG LDVAGGTGD+AFRI+E+ + + + DIN +ML VG+ RA++KGL ++ L +V+ +AE L FEDNS D YTIAFGIRNV HI+K LSEAYRVLK GGRFLCLE S V++PV ++YD +SF IPR+G Sbjct: 26 SFGFKAVDENEKQGLVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLIDN--LEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIG 213 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001886 ID=g.arboreum_cottongen_reftransV1_0001886; Name=g.arboreum_cottongen_reftransV1_0001886; organism=Gossypium arboreum; type=contig; length=895bpback to top |