g.arboreum_cottongen_reftransV1_0001886, g.arboreum_cottongen_reftransV1_0001886 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0001886
Unique Nameg.arboreum_cottongen_reftransV1_0001886
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length895
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr3chromosomeg.arboreum_cottongen_reftransV1_0001886:1..895 .
Chr3:362906..366939 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A067F3C0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036563mg PE=3 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 4.968e-138
Identity = 194/233 (83.26%), Postives = 212/233 (90.99%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MA+R+VT+NL  R+ P L S SLLHSHATSFGFKEV  EEKSQ+V  VFS+VA NYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRIL++VNSIKRRALQD L DDLQEETRIYVCDINPNML+VGK RALE+G   DKSL+WV+GDAEAL FED++MDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHVDIPVFKELYD+YSFSVIP +G
Sbjct:    1 MAVRVVTRNLGSRLLPMLSSTSLLHSHATSFGFKEVPAEEKSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A061GXT8_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_039314 PE=3 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 7.871e-138
Identity = 205/233 (87.98%), Postives = 217/233 (93.13%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALRLVT N   +IS  L SASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYD+MND MS GLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILES++SI+RRALQDPLND LQEET+IYVCDINPNML+VGK RA+E+GLGEDKSL WVQGDAE LSF DNSMDGYTIAFGIRNVTHIEKVL EA RVLKRGGRFLCLELSHV++PVFKELYDFYSFSVIP+LG
Sbjct:    1 MALRLVTNNFRSKISSMLSSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDIMNDLMSAGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESISSIRRRALQDPLNDGLQEETQIYVCDINPNMLNVGKKRAVERGLGEDKSLTWVQGDAEVLSFGDNSMDGYTIAFGIRNVTHIEKVLDEANRVLKRGGRFLCLELSHVEVPVFKELYDFYSFSVIPQLG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0D2QY40_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025900 PE=3 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 5.036e-135
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 2
Query:  326 MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG
Sbjct:    1 MVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 190          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: D7T7K9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g01590 PE=3 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 2.146e-132
Identity = 179/233 (76.82%), Postives = 209/233 (89.70%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR  + N+  ++ P   + SLLHSHATSFGFKEV+EEEKSQMVG VF++VAS+YDLMND MSGGLHRLWKDRLVSKL PFPGMKHLDVAGGTGDVAF+ILE++N +K R + +   D+LQEET+IY+CDINP MLDVGK RA+E+GLG+D +L+W++GDAEALSF+D+SMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHV+IPVFKELYD+YSFSVIP +G
Sbjct:    1 MALRTASMNMRNKLLPMFSATSLLHSHATSFGFKEVQEEEKSQMVGNVFTSVASSYDLMNDLMSGGLHRLWKDRLVSKLHPFPGMKHLDVAGGTGDVAFKILETINKMKLRTMHNVPEDELQEETQIYICDINPRMLDVGKKRAMEQGLGKDPTLLWLEGDAEALSFDDDSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVEIPVFKELYDYYSFSVIPAMG 233          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A068V646_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_119 OS=Coffea canephora GN=GSCOC_T00017310001 PE=3 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 5.333e-132
Identity = 183/233 (78.54%), Postives = 209/233 (89.70%), Query Frame = 2
Query:  200 ALRLVTKNLS-GRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            ALR +T+ +   ++     S  +LHSHATSFG+KEVREEEKSQMVG VF++VASNYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRILES+NS+KRRALQD   D+L EET+I+VCDINPNML+VGK RA E+GL ED++LVWV+GDAEAL+FEDNSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHV++P+FKELYD YSFSVIP +G
Sbjct:    4 ALRSLTRAMRRSKLLSMYSSGYMLHSHATSFGYKEVREEEKSQMVGNVFTSVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILESINSVKRRALQDSPEDNLLEETQIFVCDINPNMLNVGKKRAQERGLAEDRALVWVEGDAEALNFEDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVEVPIFKELYDLYSFSVIPAVG 236          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: B9SNZ3_RICCO (Ubiquinone/menaquinone biosynthesis methyltransferase, putative OS=Ricinus communis GN=RCOM_0440510 PE=3 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 6.291e-132
Identity = 182/231 (78.79%), Postives = 208/231 (90.04%), Query Frame = 2
Query:  203 LRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            +RL +  L  +    L S S LHSHATSFGFKEV+EEEKS+MV  VFSNVASNYDLMND MSGGLHRLWKDRLVSKL+PFPG++H+DVAGGTGD+AFRILE+VNS + RA++DPLND LQEET+IYVCDINPNML+VG+ RA+E+G GEDK LVWV+GDAEALSF D+SMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHV+IP+FKELYD+YSFS+IP LG
Sbjct:    1 MRLASTKLGRKCFHMLSSTSRLHSHATSFGFKEVQEEEKSRMVNNVFSNVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGIRHVDVAGGTGDIAFRILETVNSTRYRAIRDPLNDHLQEETQIYVCDINPNMLNVGRKRAIERGFGEDKCLVWVEGDAEALSFPDDSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVEIPMFKELYDYYSFSIIPALG 231          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: W9SUN1_9ROSA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase OS=Morus notabilis GN=L484_009209 PE=3 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 4.219e-131
Identity = 178/216 (82.41%), Postives = 202/216 (93.52%), Query Frame = 2
Query:  248 LCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
              SA+ LHSHATSFGFKEV+E+EKSQMVG VFS+VASNYDLMND MS GLHRLWKDRLVS+L+PFPGMKHLDVAGGTGDVAFRILES+NS +RRALQD   D LQEET+IYVCDINPNML+VGK RA+E+GLGE++SL+WV+GDAEAL+F++NSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHVDIPVFK+LYD+YSFS+IP +G
Sbjct:    2 FSSANALHSHATSFGFKEVKEDEKSQMVGNVFSSVASNYDLMNDLMSAGLHRLWKDRLVSELNPFPGMKHLDVAGGTGDVAFRILESINSTRRRALQDVSEDGLQEETQIYVCDINPNMLNVGKKRAMERGLGENQSLIWVEGDAEALTFDNNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKDLYDYYSFSIIPAVG 217          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A059AM94_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01084 PE=3 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.113e-130
Identity = 179/235 (76.17%), Postives = 205/235 (87.23%), Query Frame = 2
Query:  197 MALRLVTKNL--SGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR++ + L    ++ P   SASLLHSHATSFGFKEVREE+KSQ+VG VF++VAS YDLMND MS GLHRLWKDRLVSKL PFPGMKHLDVAGGTGDVAFRILE +NS + RALQD   D L EET+IY+CDINPNML+VGK RA+E+G G++K+L WV+GDAEAL FEDNSMDGYTIAFGIRNVTHIEK L+EA+RVL+RGGRFLCLELSHVD P+FKELYD+YSFSVIP +G
Sbjct:    1 MALRMIARRLRLQSKLRPMFSSASLLHSHATSFGFKEVREEDKSQLVGNVFTSVASTYDLMNDLMSAGLHRLWKDRLVSKLHPFPGMKHLDVAGGTGDVAFRILEDINSTRHRALQDATEDYLHEETQIYICDINPNMLNVGKKRAIERGFGDNKALRWVEGDAEALKFEDNSMDGYTIAFGIRNVTHIEKALAEAHRVLRRGGRFLCLELSHVDTPIFKELYDYYSFSVIPAMG 235          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: K4AY39_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g081470.2 PE=3 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.313e-130
Identity = 186/236 (78.81%), Postives = 207/236 (87.71%), Query Frame = 2
Query:  188 CRGMALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
             R +A  L  KNLS       C AS L SHATSFGFK+V EEEKS+MVG VF++VASNYDLMND MSGGLHRLWKDRLVSKL+PFPGMKHLDVAGGTGDVAFRILE++ ++KRRA+QD L+DD+ EETRIYVCDINPNML VGK RA ++G G +KSLVWV+GDAEALSFEDNSMDGYTIAFGIRNVTHIEKVL+EAYRVLKRGGRFLCLELSHVDIPV+K+LYD YSFSVIP +G
Sbjct:    5 VRSVARSLRRKNLSS----MYCPASTLQSHATSFGFKDVAEEEKSKMVGNVFTSVASNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILENIKNVKRRAMQDVLDDDMIEETRIYVCDINPNMLGVGKKRAEQRGFGLEKSLVWVEGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLAEAYRVLKRGGRFLCLELSHVDIPVYKDLYDVYSFSVIPAVG 236          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Match: A0A0A0LXL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G086890 PE=3 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 8.708e-130
Identity = 181/233 (77.68%), Postives = 206/233 (88.41%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR VT+ +  +  P   SA+LLHSHATSFGFKEV EEEKS++VG VFSNVASNYDLMND MSGGLHRLWKDRLVS+L+PFPGM HLDVAGGTGDVAFRIL+ +N +KRRA+QD   DDLQE+T++YVCDINP+ML VGK RA E+GLGE  SL+WV+GDAEALSF DNSMDGYTIAFGIRNVTHIEKVL EAYRVL+RGGRFLCLELSHV+ P+FKELYD+YSFS+IP +G
Sbjct:  112 MALRSVTRRIGSKFFPMFSSANLLHSHATSFGFKEVPEEEKSRLVGNVFSNVASNYDLMNDLMSGGLHRLWKDRLVSELNPFPGMNHLDVAGGTGDVAFRILDRINDVKRRAMQDVREDDLQEQTQVYVCDINPHMLSVGKKRATERGLGEGGSLIWVEGDAEALSFPDNSMDGYTIAFGIRNVTHIEKVLDEAYRVLRRGGRFLCLELSHVEAPLFKELYDYYSFSIIPAVG 344          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ARATH (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Arabidopsis thaliana GN=COQ5 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 3.154e-125
Identity = 176/233 (75.54%), Postives = 203/233 (87.12%), Query Frame = 2
Query:  197 MALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            MALR V++ L  RI  +    + LHSHATSFGF+EV+EEEKS++VG VF+NVAS+YD+MND MSGGLHRLWK+RLV KLSPF GMKHLDVAGGTGDVAFRI ++V S+KRRALQ  +++   EET+IYVCDINPNML+VGK RA E+GL ++KSLVWV+GDAEALSF+DNSMDGYTIAFGIRNVTHIEK L+EAYRVLKRGGRFLCLELSHV+IPVFK LYD YSF VIP LG
Sbjct:    1 MALRSVSRRLGSRILNQRSFVASLHSHATSFGFQEVKEEEKSKLVGNVFTNVASSYDIMNDVMSGGLHRLWKERLVGKLSPFAGMKHLDVAGGTGDVAFRIYDAVYSVKRRALQ-KVDEASLEETQIYVCDINPNMLNVGKQRAAERGLRDNKSLVWVEGDAEALSFDDNSMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVEIPVFKNLYDLYSFQVIPNLG 232          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_ORYSJ (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Oryza sativa subsp. japonica GN=COQ5 PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 7.379e-120
Identity = 170/236 (72.03%), Postives = 196/236 (83.05%), Query Frame = 2
Query:  191 RGMALRLVTKNLSGRISPKLC-SASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            R  A RL + +    +SP      + LHSHATSFG+K+V EE+KS++VG VFS+VAS+YDLMND MS GLHRLWKDRL+SKL+PFPGMKHLDVAGGTGDVAFR LE +NS+  RA+Q  L D ++EET+IYVCDINPNML+VGK RA E+G  E   L W+QGDAEALSFED SMDGYTIAFGIRNVTHIEK LSEAYRVLKRGGRFLCLELSHVD+P+FKE+YD YSFSVIP +G
Sbjct:    4 RSAAGRLASSSRRRLLSPPTSIHTAFLHSHATSFGYKQVAEEDKSKLVGNVFSSVASSYDLMNDLMSVGLHRLWKDRLISKLNPFPGMKHLDVAGGTGDVAFRALERINSVSHRAMQGTLTD-IEEETQIYVCDINPNMLNVGKKRASERGYKEGHCLSWIQGDAEALSFEDGSMDGYTIAFGIRNVTHIEKALSEAYRVLKRGGRFLCLELSHVDVPLFKEIYDVYSFSVIPAVG 238          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_XENLA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Xenopus laevis GN=coq5 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.646e-69
Identity = 117/223 (52.47%), Postives = 146/223 (65.47%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL--NDDL-----------QEE-----TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V EEEK + V KVF NVA NYD+MND MS G+HR WKD L+  + P PGM+ LD+AGGTGD++FR +  + + + + ++  L    DL           +EE     +R  +CDIN  ML VG  ++L   LG  + L WV GDAE L F D+  D YTIAFGIRNVTHIE+ L EAYRVLK GGRFLCLE SHV+ P+  ++YD YSF VIP LG
Sbjct:   34 THFGFQAVSEEEKRERVYKVFENVAHNYDIMNDAMSLGVHRFWKDWLLQLMKPTPGMQLLDMAGGTGDISFRFINYIRAQREKWIRQELKFQQDLSWPDISKTYQNKEEGSLMGSRAVICDINKEMLKVGLQKSLR--LGYSEGLSWVAGDAEELPFGDDKFDVYTIAFGIRNVTHIEQALQEAYRVLKPGGRFLCLEFSHVNNPLLSKIYDVYSFQVIPVLG 254          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_HUMAN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Homo sapiens GN=COQ5 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.247e-69
Identity = 123/237 (51.90%), Postives = 151/237 (63.71%), Query Frame = 2
Query:  248 LCSASLL----HSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            L SA LL     +  T FGF+ V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L  V S  +R       A Q+   +++ +E          +R+ VCDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   37 LLSARLLSQEKRAAETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_BOVIN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Bos taurus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.687e-69
Identity = 125/258 (48.45%), Postives = 157/258 (60.85%), Query Frame = 2
Query:  173 KAGNRCRGMALRLVTKNLSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            +A + CR   LR  + +  G +  +L S     +  T FGF+ V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ PFPG + LDVAGGTGD+AFR L  V +     ++R L+   N   +E  R Y             VCDIN  ML +GK +A  +  G    L W+ GDAE L F+DN  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   19 RAVSGCRLPGLR--SSSPRGPLGARLLSQEK-EATETHFGFETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPFPGTQLLDVAGGTGDIAFRFLNYVQAQHQRKQKRQLRAQQNLSWEEIARKYQNEEDSLGGSHVMVCDINKEMLKIGKQKA--RAQGYKAGLAWILGDAEELPFDDNKFDVYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLLSRLYDVYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_DANRE (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Danio rerio GN=coq5 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.709e-68
Identity = 121/250 (48.40%), Postives = 155/250 (62.00%), Query Frame = 2
Query:  203 LRLVTKNLSGR--ISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNS-------IKRRALQDPLNDDLQ----------EETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            LR  +K L  R  I+ +   +      +T FGF+ V EEEK++ V KVF +VA  YD+MND MS G+HRLWKD L+  ++P PG++ LD AGGTGD++FR LE   S       ++ ++ Q P   D+            ++R  VCDIN  ML VGK RA + G+     L WV GDAE L F+D+  D YTIAFGIRNVTHIE+ L EA+RVLK GGRF+CLE S V  P+   LYD YSF +IP LG
Sbjct:   24 LRCRSKYLCRRAAITARRGYSDSTEGRSTHFGFQTVPEEEKAEKVYKVFESVAKKYDVMNDAMSLGIHRLWKDTLLHIMNPQPGLRLLDTAGGTGDISFRFLEYTRSMYDRQQRLRAKSQQTPSWKDIAGHYVSDEEGPPQSRAVVCDINKEMLKVGKQRAEDAGI--TTGLSWVAGDAEELPFDDDQFDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFMCLEFSKVTNPLLARLYDAYSFQMIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_CHICK (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Gallus gallus GN=COQ5 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.918e-68
Identity = 117/223 (52.47%), Postives = 143/223 (64.13%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPL-----------NDDLQEE-------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V E E+ + + +VF NVA  YD+MND MS G+HR+WKD LV K++P PG   +DVAGGTGD+AFR L  V S++ R LQ  L           +   QEE       +++ VCDIN  ML  GK +A  + LG  + L WV G+AE L F+D+  D YTIAFGIRNVT I+  L EAYRVLK GGRFLCLE SHV  P+   LYD YSF VIP LG
Sbjct:   35 THFGFQNVSEAERREKIYQVFENVAEKYDVMNDSMSLGIHRVWKDILVHKMNPSPGTLLVDVAGGTGDIAFRFLNYVRSVRERQLQQKLRHHQNLSWQEISKSYQEEKSNPLGDSQVVVCDINKEMLKAGKQKA--QHLGYSEGLSWVLGNAEELHFDDDKFDVYTIAFGIRNVTRIDLALQEAYRVLKPGGRFLCLEFSHVSNPLLSRLYDLYSFQVIPVLG 255          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_RAT (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Rattus norvegicus GN=Coq5 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.408e-68
Identity = 118/222 (53.15%), Postives = 141/222 (63.51%), Query Frame = 2
Query:  281 TSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSI----KRRALQDPLNDDLQEETRIY-------------VCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            T FGF+ V E+EK   V +VF +VA  YDLMND MS G+HR WKD L+ K+ P PG + LDVAGGTGD+AFR L  V +     +RR L+   N   +E  R Y             VCDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP +G
Sbjct:   52 THFGFETVSEKEKGGKVYQVFQSVARKYDLMNDMMSLGIHRAWKDLLIRKMHPLPGTQLLDVAGGTGDIAFRFLSYVQTQHERKQRRQLRTRQNLSWEEIARKYQSKEDPLGGSLVMVCDINREMLKVGKQKALARG--HTAGLAWVLGDAEELPFDDDRFDVYTIAFGIRNVTHIDRALQEAHRVLKPGGRFLCLEFSQVNDPLISRLYDLYSFQVIPVIG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: COQ5_PONAB (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Pongo abelii GN=COQ5 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.049e-68
Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 2
Query:  224 LSGRISPKLCSASLLHSHATSFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPFPGMKHLDVAGGTGDVAFRILESVNSIKRR-------ALQDPLNDDLQEE----------TRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            LS R+ P+   A+  H     FG + V EEEK   V +VF +VA  YD+MND MS G+HR+WKD L+ K+ P PG + LDVAGGTGD+AFR L  V S  +R       A Q+   +++ +E          +R+ +CDIN  ML VGK +AL +G      L WV GDAE L F+D+  D YTIAFGIRNVTHI++ L EA+RVLK GGRFLCLE S V+ P+   LYD YSF VIP LG
Sbjct:   38 LSARLLPQEKRATETH-----FGSETVSEEEKGGKVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMRPLPGTQLLDVAGGTGDIAFRFLNYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVMCDINKEMLKVGKQKALAQGY--RAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCLEFSQVNNPLISRLYDLYSFQVIPVLG 271          
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Match: UBIE_BRUME (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=ubiE PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 9.373e-67
Identity = 111/206 (53.88%), Postives = 140/206 (67.96%), Query Frame = 2
Query:  284 SFGFKEVREEEKSQMVGKVFSNVASNYDLMNDFMSGGLHRLWKDRLVSKLSPF--PGMKHLDVAGGTGDVAFRILESVNSIKRRALQDPLNDDLQEETRIYVCDINPNMLDVGKNRALEKGLGEDKSLVWVQGDAEALSFEDNSMDGYTIAFGIRNVTHIEKVLSEAYRVLKRGGRFLCLELSHVDIPVFKELYDFYSFSVIPRLG 895
            SFGFK V E EK  +V  VF  VA  YD+MND MS G+HR+WKD +V+ L+P   PG   LDVAGGTGD+AFRI+E+                   +  + + DIN +ML VG+ RA++KGL ++  L +V+ +AE L FEDNS D YTIAFGIRNV HI+K LSEAYRVLK GGRFLCLE S V++PV  ++YD +SF  IPR+G
Sbjct:   26 SFGFKAVDENEKQGLVNDVFHKVAKRYDIMNDLMSAGMHRVWKDAMVAWLAPSKRPGWTSLDVAGGTGDIAFRIVEASG----------------RQAHVTILDINGSMLGVGRERAIKKGLIDN--LEFVEANAEELPFEDNSFDAYTIAFGIRNVPHIDKALSEAYRVLKPGGRFLCLEFSEVELPVLDKVYDEWSFRAIPRIG 213          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067F3C0_CITSI4.968e-13883.26Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A061GXT8_THECC7.871e-13887.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A0D2QY40_GOSRA5.036e-135100.00Uncharacterized protein OS=Gossypium raimondii GN=... [more]
D7T7K9_VITVI2.146e-13276.82Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A068V646_COFCA5.333e-13278.54Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
B9SNZ3_RICCO6.291e-13278.79Ubiquinone/menaquinone biosynthesis methyltransfer... [more]
W9SUN1_9ROSA4.219e-13182.412-methoxy-6-polyprenyl-1,4-benzoquinol methylase O... [more]
A0A059AM94_EUCGR1.113e-13076.17Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
K4AY39_SOLLC1.313e-13078.81Uncharacterized protein OS=Solanum lycopersicum GN... [more]
A0A0A0LXL7_CUCSA8.708e-13077.68Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0001886 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
COQ5_ARATH3.154e-12575.542-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_ORYSJ7.379e-12072.032-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_XENLA2.646e-6952.472-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_HUMAN3.247e-6951.902-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_BOVIN3.687e-6948.452-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_DANRE1.709e-6848.402-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_CHICK1.918e-6852.472-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_RAT2.408e-6853.152-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
COQ5_PONAB6.049e-6850.212-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
UBIE_BRUME9.373e-6753.88Ubiquinone/menaquinone biosynthesis C-methyltransf... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004033UbiE/COQ5 methyltransferasePFAMPF01209Ubie_methyltrancoord: 40..233
e-value: 1.4E-58
score: 197.8
IPR004033UbiE/COQ5 methyltransferaseTIGRFAMTIGR01934TIGR01934coord: 45..233
e-value: 5.8E-57
score: 190.5
IPR004033UbiE/COQ5 methyltransferasePROSITEPS51608SAM_MT_UBIEcoord: 40..233
score: 70.491
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseGENE3D3.40.50.150coord: 43..230
e-value: 5.1E-43
score: 146.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 27..229
NoneNo IPR availablePANTHERPTHR10108:SF242-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIALcoord: 28..109
NoneNo IPR availablePANTHERPTHR10108:SF242-METHOXY-6-POLYPRENYL-1,4-BENZOQUINOL METHYLASE, MITOCHONDRIALcoord: 127..233
NoneNo IPR availablePANTHERPTHR10108METHYLTRANSFERASEcoord: 28..109
coord: 127..233
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..21
score: 0.452
IPR023576UbiE/COQ5 methyltransferase, conserved sitePROSITEPS01183UBIE_1coord: 56..71
IPR023576UbiE/COQ5 methyltransferase, conserved sitePROSITEPS01184UBIE_2coord: 196..210

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0001886 ID=g.arboreum_cottongen_reftransV1_0001886; Name=g.arboreum_cottongen_reftransV1_0001886; organism=Gossypium arboreum; type=contig; length=895bp
CGCCTCTGTTTAGTCTTTAGTACCCTAAAACCCCAAAATTATCAGTGATT
TTCGTTATTCCATTGATCCTTTCGCCAATATCCAACGCCATCTCTGTCTT
CACCATTTTCAGTCACGATCGAAATCTGCTGGGCCCTGGAGGTTTCGTTT
CTCCATACAAATCGACACAGTGAAAGCAGGCAATCGTTGTAGGGGAATGG
CTCTCAGGCTGGTAACTAAGAATCTCAGCGGTCGAATCTCGCCCAAGCTG
TGTTCTGCTTCTCTGTTACATTCACATGCCACAAGTTTTGGGTTTAAAGA
AGTACGAGAAGAAGAGAAAAGCCAAATGGTTGGTAAAGTCTTTAGCAATG
TTGCTTCAAACTATGATCTCATGAATGACTTCATGAGTGGCGGACTACAT
AGACTGTGGAAGGATAGATTGGTTTCCAAACTGAGCCCATTTCCAGGAAT
GAAACATCTTGATGTAGCTGGTGGAACAGGTGATGTTGCTTTCAGGATTC
TGGAAAGTGTTAACAGCATCAAACGCAGAGCATTACAAGATCCACTCAAT
GATGACCTACAGGAAGAAACTCGGATATATGTCTGCGACATCAACCCAAA
CATGTTAGATGTTGGAAAAAATCGTGCCCTAGAGAAAGGTCTTGGAGAAG
ACAAATCTCTTGTATGGGTGCAAGGAGATGCAGAAGCCCTAAGTTTTGAA
GATAATTCAATGGATGGTTATACCATTGCATTTGGAATTAGAAATGTCAC
CCACATAGAGAAAGTTCTTTCTGAAGCTTATAGGGTTTTGAAACGGGGAG
GAAGATTCCTTTGTCTCGAACTGAGCCATGTTGACATTCCTGTATTTAAG
GAACTGTATGACTTTTATTCTTTCTCGGTTATCCCACGACTGGGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004033UbiE/COQ5_MeTrFase
IPR029063SAM-dependent_MTases_sf
IPR023576UbiE/COQ5_MeTrFase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity