g.arboreum_cottongen_reftransV1_0006205, g.arboreum_cottongen_reftransV1_0006205 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: M5XCV2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007245mg PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 8.334e-88 Identity = 164/225 (72.89%), Postives = 201/225 (89.33%), Query Frame = -2 Query: 154 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTD 819 LAFNAVFSY +NSQK TALILNSV+I+S SAALIAV++DS GP+GVSK K+++GFICTLGASA+YSLLLSLMQL+FQKVL+KET++VVLEMQIYT+LVA+C +T GLF SGEW+ L EM+ F GRVSYV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+AA+++FHD+M+GVK+IAMLLA+ GF +YIYQNYLDD+K R+ + ++SH D Sbjct: 149 LAFNAVFSYFINSQKFTALILNSVIIVSFSAALIAVSDDSSGPAGVSKWKHILGFICTLGASAIYSLLLSLMQLTFQKVLKKETFSVVLEMQIYTALVASCAATVGLFASGEWRTLHGEMENFGEGRVSYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIAAVIIFHDKMDGVKIIAMLLAIWGFATYIYQNYLDDSKVRRRQTGVTESHND 373
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: I3SXT2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.812e-87 Identity = 164/225 (72.89%), Postives = 198/225 (88.00%), Query Frame = -2 Query: 154 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTD 819 LAFNAVFSY +NSQK TALI+NS V+L+ SA+L+AVNEDSD P G+S+GKY+VGF+ TLGASALYSL+LSLMQLSF KVL+KET++VVLEMQIYTSLVATC ST GLF SGEW L EM+GFK G V+YVLTLVW AV+WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+A+++VFHD+MNGVK+I+MLLA+ GF SYIYQNY+DD K R+++ S+SH D Sbjct: 137 LAFNAVFSYFINSQKFTALIINSTVVLTFSASLLAVNEDSDKPDGLSQGKYIVGFLVTLGASALYSLILSLMQLSFDKVLKKETFSVVLEMQIYTSLVATCASTIGLFASGEWHSLHGEMEGFKKGEVAYVLTLVWTAVAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIASVIVFHDKMNGVKIISMLLAIWGFASYIYQNYIDDLKTRRAQAVASKSHDD 361
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A067K9E7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14681 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 6.377e-87 Identity = 164/227 (72.25%), Postives = 201/227 (88.55%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTDDV 819 LAFNAVFSY +NSQK T+LILNSVV+LS SAALIAVN+DSDGP+GVSK KY++GF+CTLGASA+YSLLLSLMQL FQK+++KET++VVLEMQIYTSLVATCVS GLFGSGEWK L EM+GF GRVSY++TL W AVSWQVC+VGVVGLI VSSLFSNVISTL+LA++P+AA+LVFHD+MNG+K+IA+L+A GF Y YQNYLDD++AR+++ +++H D + Sbjct: 139 LAFNAVFSYFINSQKFTSLILNSVVVLSFSAALIAVNDDSDGPAGVSKWKYIIGFLCTLGASAIYSLLLSLMQLFFQKIIKKETFSVVLEMQIYTSLVATCVSVIGLFGSGEWKTLHAEMEGFGYGRVSYIMTLFWTAVSWQVCSVGVVGLILLVSSLFSNVISTLALAVSPIAAVLVFHDKMNGLKIIALLMAFWGFGCYTYQNYLDDSQARRAQHDANETHRDSL 365
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: G7KSG2_MEDTR (Purine permease OS=Medicago truncatula GN=MTR_7g080750 PE=4 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 3.677e-86 Identity = 152/226 (67.26%), Postives = 185/226 (81.86%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTDD 819 LAFNA+FSY +NSQK TALI+ DSD PSG+ KGKY+VGF+CTLGASALYSLLLSLMQL+F+KVL+KET++VVLEMQIYTSLVATC ST GLF SGEW L +EMK F+ G V+Y++TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLAITP+AA++VFHD+MNGVK+I+ML+AL GF SYIYQNYLDD KAR+++ S+ H + Sbjct: 138 LAFNAIFSYFINSQKFTALIVKLD-------------RDSDTPSGIPKGKYVVGFLCTLGASALYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSLVATCASTIGLFASGEWHSLHEEMKSFQKGEVAYLMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAITPIAAVIVFHDKMNGVKIISMLMALWGFASYIYQNYLDDLKARRAQAGTSKPHNES 350
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: D7KNT5_ARALL (ATPUP11 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473816 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 8.570e-86 Identity = 160/224 (71.43%), Postives = 195/224 (87.05%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDV 819 LAFNAVFSY +N+QK TALILNSVV+LS SAALIA+N+D+D PSGVS+ KY+VGF+CTL ASALYSLLLSLMQ SF+K+L++ET++VVLEMQIYTSLVATCVS GLF SGEW+ L EM+G+ G+ SYVLTLVW AV+WQVC+VGVVGLIF V+SLFSNVISTLSLA+TPLAAL+VF D+M+GVK++AML+AL GF SY+YQN++DD K R++ Q+ V Sbjct: 77 LAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSNVISTLSLAVTPLAALVVFRDKMSGVKIMAMLIALWGFASYVYQNHIDDLKVRRARQQAQAGRV 300
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: R0ILX9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009499mg PE=4 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 1.312e-85 Identity = 161/224 (71.88%), Postives = 196/224 (87.50%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDV 819 LAFNAVFSY +N+QK TALILNSVV+LS SAALIA+N+D+D P+GV + KY+VGF+CTL ASALYSLLLSLMQ SF+K+L++ET++VVLEMQIYTSLVATCVS GLF SGEW+ L EM+G+ G+ SYVLTLVW AV+WQVC+VGVVGLIF V+SLFSNVISTLSLA+TPLAAL+VF D+M+GVKV+AML+AL GF SY+YQN++DD K R++ Q+HT V Sbjct: 142 LAFNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPAGVPRSKYIVGFVCTLAASALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVATCVSVIGLFASGEWRTLHGEMEGYHKGQASYVLTLVWTAVTWQVCSVGVVGLIFLVTSLFSNVISTLSLAVTPLAALVVFRDKMSGVKVMAMLIALWGFASYVYQNHIDDLKVRRARQQAHTRRV 365
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A068ULG2_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_38 OS=Coffea canephora GN=GSCOC_T00028716001 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.854e-85 Identity = 160/225 (71.11%), Postives = 194/225 (86.22%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSH--TDD 819 LAFNAVFS+ +N QK T +ILNSV++L+LSA+L+A N DS PSGVSKGKYL+GF+ TL AS LYSLLLSLMQLSFQKVL+KET++VVLEMQIYTS+VATC+ST GLF SG+W LQ EM + +G++SYV+TLVW A+ WQ+CAVGV+GLIF VSSLFSNVISTLSLAITP+AAL+VFHD+MNGVK+IAML+AL GF SYIYQNY+DD K RK+ + + T+D Sbjct: 138 LAFNAVFSFFINRQKFTIMILNSVIVLTLSASLLAANGDSTEPSGVSKGKYLIGFLATLAASVLYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTSVVATCISTIGLFASGDWSTLQGEMNTYSTGKLSYVMTLVWTAICWQICAVGVIGLIFLVSSLFSNVISTLSLAITPIAALIVFHDKMNGVKIIAMLMALWGFASYIYQNYIDDIKTRKTHTNAERTTND 362
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A059C4F3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01707 PE=4 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 4.679e-85 Identity = 171/227 (75.33%), Postives = 201/227 (88.55%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTDDV 819 LAFNAVFS+ LNSQ+ TALILNSVV+LSLSAALIAVN+DSDG SGVSKGKY++GF+CTLGASA+YSLLLSLMQLSFQKVL+KET++VVLEMQIYT+LVATCVS GLF SGEWK L +EM+ F GR SYVLT+V+ AV WQ+C+VGVVGLIF VSSLFSNVIST+ LA+TP+A+++VFHD+MNGVKVIAMLLAL GF SYIYQNYLDD+KAR+ + ++ D V Sbjct: 131 LAFNAVFSFYLNSQRFTALILNSVVVLSLSAALIAVNDDSDGLSGVSKGKYILGFVCTLGASAIYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTALVATCVSVLGLFASGEWKTLHEEMQSFGQGRASYVLTVVFTAVCWQICSVGVVGLIFIVSSLFSNVISTVGLAVTPIASVIVFHDKMNGVKVIAMLLALWGFASYIYQNYLDDSKARRMQGAGDETRNDSV 357
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: B9I8W9_POPTR (Purine permease family protein OS=Populus trichocarpa GN=POPTR_0014s04340g PE=4 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 5.895e-85 Identity = 166/218 (76.15%), Postives = 195/218 (89.45%), Query Frame = -2 Query: 166 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQ 819 LAFNAVFSY +NSQK TALILNSV+ILS S+ALIAVN+DS GPSGVSK KY +GF+ TLGASA+YSLLLSLMQLSFQKV++KET++VVLEMQI+TS+VATCVS AGLF SGEWK L EM+ F G VSYVLTLVW AV+WQVC+VGVVGLIF VSSLFSNVIST++LA++P+AA++VFHD+MNGVK+IAMLLA+ GF SY YQNYLDD+K RK++S Sbjct: 141 LAFNAVFSYFINSQKFTALILNSVIILSFSSALIAVNDDSGGPSGVSKWKYFLGFLATLGASAVYSLLLSLMQLSFQKVIKKETFSVVLEMQIFTSIVATCVSVAGLFASGEWKTLHGEMQSFGKGSVSYVLTLVWTAVTWQVCSVGVVGLIFVVSSLFSNVISTVALAVSPIAAVIVFHDKMNGVKIIAMLLAVWGFASYTYQNYLDDSKLRKAQSN 358
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0B2QR17_GLYSO (Putative purine permease 11 OS=Glycine soja GN=glysoja_042894 PE=4 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.062e-84 Identity = 157/223 (70.40%), Postives = 198/223 (88.79%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDD 819 LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNED+D PSG SKGKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVLEMQIYTS VA+ S GLF SGEW+ L EM+GF+ G V+YV+TLVW +++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+K R +++ + + + Sbjct: 136 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDTDEPSGFSKGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSFVASGASVIGLFASGEWRTLHGEMEGFQKGYVAYVMTLVWTSIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKTRHAQAATKSQN 358
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP16_ARATH (Probable purine permease 16 OS=Arabidopsis thaliana GN=PUP16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.787e-13 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 286 FQKVL-------RKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLV 594 F KVL K+ + +VLEMQI S +AT + T GLF SGE+K L+ + + FK G+ Y+L+LV A+SWQV AVG++GL+ VS LF++V+ + +P+ ALLV Sbjct: 223 FDKVLVKTKRYGNKKVFRMVLEMQICVSFIATLICTVGLFASGEFKELKGDSERFKKGKTYYILSLVGLALSWQVWAVGLLGLVLLVSGLFADVV---HMGASPVVALLV 329
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP4_ARATH (Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.405e-10 Identity = 62/205 (30.24%), Postives = 111/205 (54.15%), Query Frame = -2 Query: 211 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKG-FKSGRVSY-VLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIY 819 L F + S ++ QK+T LN VV+L+LS+ L+A++ D PSG++K KY +G++ T+GA L++L L + + ++ V Y +V+E+Q+ AT +T G+ G +K + E F G Y ++ V+WQ+ G+++ S + + T LA+ + ++ + D GVK+++ +L + GF SY Y Sbjct: 135 LVFTLILSRIIVKQKITFSNLNCVVLLTLSSVLLALDSSKDKPSGLTKTKYFIGYVSTIGAGLLFALYLPVTEKLYRTVY---CYAMVMEVQLVMEFAATVFATIGMACEGGFKEMVKEANHVFTKGPTFYWTFAILANVVTWQLSFAATSGMVYLTSGITGGICMTALLAMNVIGGVVAYGDVFGGVKIVSTVLCIWGFSSYTY 336 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 22
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006205 ID=g.arboreum_cottongen_reftransV1_0006205; Name=g.arboreum_cottongen_reftransV1_0006205; organism=Gossypium arboreum; type=contig; length=820bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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