g.arboreum_cottongen_reftransV1_0006205, g.arboreum_cottongen_reftransV1_0006205 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0D2SGF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G084100 PE=4 SV=1) HSP 1 Score: 382.489 bits (981), Expect = 1.071e-128 Identity = 229/231 (99.13%), Postives = 230/231 (99.57%), Query Frame = -2 Query: 127 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV 819 LAFNAVFSYLLNSQKLTALILNSVVILSLSAALIAVNEDSDGPSGVSKGKYLVGFICTLGASALYSLLLSLMQLSFQKVLRKETYNVVLEMQIYTSLVATCVSTAG+FGSGEWKGLQDEMKGFKSGRVSYVLTLVW AVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV Sbjct: 141 LAFNAVFSYLLNSQKLTALILNSVVILSLSAALIAVNEDSDGPSGVSKGKYLVGFICTLGASALYSLLLSLMQLSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGMFGSGEWKGLQDEMKGFKSGRVSYVLTLVWTAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESHHV 371
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A061DV33_THECC (Purine permease 11 isoform 2 OS=Theobroma cacao GN=TCM_005801 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 5.340e-98 Identity = 188/229 (82.10%), Postives = 209/229 (91.27%), Query Frame = -2 Query: 133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESH 819 LAFNAVFS+ LNSQK TALILNSVVILSLSAALIAVN+DS+GPSGVSKGK+L+GF+CT+GASALYSLLLSLMQLSFQKVL+KET++VVLEMQIYTSLVA+CVST GLF SGEWK L EM+ F SGRVSYVLTLVW AV+WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNYLDD KAR+S++ +QE+H Sbjct: 124 LAFNAVFSFFLNSQKFTALILNSVVILSLSAALIAVNDDSEGPSGVSKGKFLLGFLCTVGASALYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTSLVASCVSTVGLFASGEWKTLHHEMEDFNSGRVSYVLTLVWTAVTWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYLDDKKARRSQTD------VQENH 346
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A061DUU7_THECC (Purine permease 11 isoform 1 OS=Theobroma cacao GN=TCM_005801 PE=4 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.001e-97 Identity = 188/229 (82.10%), Postives = 209/229 (91.27%), Query Frame = -2 Query: 133 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDVIQESH 819 LAFNAVFS+ LNSQK TALILNSVVILSLSAALIAVN+DS+GPSGVSKGK+L+GF+CT+GASALYSLLLSLMQLSFQKVL+KET++VVLEMQIYTSLVA+CVST GLF SGEWK L EM+ F SGRVSYVLTLVW AV+WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNYLDD KAR+S++ +QE+H Sbjct: 139 LAFNAVFSFFLNSQKFTALILNSVVILSLSAALIAVNDDSEGPSGVSKGKFLLGFLCTVGASALYSLLLSLMQLSFQKVLKKETFSVVLEMQIYTSLVASCVSTVGLFASGEWKTLHHEMEDFNSGRVSYVLTLVWTAVTWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYLDDKKARRSQTD------VQENH 361
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0D2PSU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G111600 PE=4 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.241e-95 Identity = 183/224 (81.70%), Postives = 204/224 (91.07%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSESQSHTDDV 819 LAFNAVFSY LNSQK TALILNSVVILSLSAALIAVN+DSDGPSGV KGK+L+GF+CTLGASALYSLLLS MQLSFQKVL+KET++VVLEMQIYTS+VA+C+ST GLF SGEWK LQ EM+ F +GRVSYVLTLVW A++WQVCAVGVVGLIF VSSLFSNVISTLSLA+TPLAAL+VFHD+MNGVKVIAMLLALCGF SYIYQNY+DD KAR Q+H ++ Sbjct: 139 LAFNAVFSYFLNSQKFTALILNSVVILSLSAALIAVNDDSDGPSGVPKGKFLIGFLCTLGASALYSLLLSFMQLSFQKVLKKETFSVVLEMQIYTSVVASCLSTIGLFASGEWKSLQHEMEVFGTGRVSYVLTLVWTAITWQVCAVGVVGLIFVVSSLFSNVISTLSLAVTPLAALVVFHDKMNGVKVIAMLLALCGFASYIYQNYIDDKKART--LQTHVREI 360
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: A0A0B2S886_GLYSO (Putative purine permease 11 OS=Glycine soja GN=glysoja_001002 PE=4 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 2.479e-91 Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819 LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S GLF SGEW L EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++ ++SH D Sbjct: 75 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 299
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: W9RFX8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023902 PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 4.470e-90 Identity = 169/227 (74.45%), Postives = 201/227 (88.55%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKS---ESQSHTDDV 819 LAFNAVFSY +NSQK TAL+LNSVV+LSLSAALIAVN+DSDGP+GVSK KY++GFICTL ASA+YSLLLSLMQLSFQKVL++ET+ VVLEMQIYTSLVAT VS GLF SGEW+ L EM+GF G +YV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+A+++VFHD+MNGVK++AML+A+ GF SYIYQNYLDD+KAR++ E++S D V Sbjct: 76 LAFNAVFSYFINSQKFTALVLNSVVVLSLSAALIAVNDDSDGPTGVSKAKYIIGFICTLAASAIYSLLLSLMQLSFQKVLKRETFTVVLEMQIYTSLVATSVSLIGLFASGEWRILHGEMQGFGKGGFAYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIASVIVFHDKMNGVKIVAMLMAIWGFASYIYQNYLDDSKARRTQTRETESQNDSV 302
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: I1N423_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 1.112e-89 Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819 LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S GLF SGEW L EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++ ++SH D Sbjct: 136 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 360
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: K7MUJ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 1.720e-89 Identity = 165/225 (73.33%), Postives = 201/225 (89.33%), Query Frame = -2 Query: 151 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE--SQSHTDD 819 LAFNAVFSY +NSQK TALI+NS V+L+LSAAL+AVNEDSD PSG+S GKY++GF+CTLGASA+YSLLLSLMQL+F+KVL+KET++VVL+MQIYTSLVATC S GLF SGEW L EMKGF+ G V+YV+TLVW A++WQVC+VGVVGLIF VSSL+SNVIST+SLA+TP+AA++VFHD+MNGVK+I+MLLAL GF SYIYQNYLDD+KAR ++ ++SH D Sbjct: 139 LAFNAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDSDEPSGLSMGKYIIGFLCTLGASAVYSLLLSLMQLTFEKVLKKETFSVVLQMQIYTSLVATCASVIGLFASGEWHTLHGEMKGFQKGHVAYVMTLVWTAIAWQVCSVGVVGLIFLVSSLYSNVISTVSLAVTPIAAVIVFHDKMNGVKIISMLLALWGFASYIYQNYLDDSKARHAQAVAKSHNDS 363
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: W9QQS4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021136 PE=4 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 3.312e-88 Identity = 169/227 (74.45%), Postives = 201/227 (88.55%), Query Frame = -2 Query: 148 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKS---ESQSHTDDV 819 LAFNAVFSY +NSQK TAL+LNSVV+LSLSAALIAVN+DSDGP+GVSK KY++GFICTL ASA+YSLLLSLMQLSFQKVL++ET+ VVLEMQIYTSLVAT VS GLF SGEW+ L EM+GF G +YV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+A+++VFHD+MNGVK++AML+A+ GF SYIYQNYLDD+KAR++ E++S D V Sbjct: 163 LAFNAVFSYFINSQKFTALVLNSVVVLSLSAALIAVNDDSDGPTGVSKAKYIIGFICTLAASAIYSLLLSLMQLSFQKVLKRETFTVVLEMQIYTSLVATSVSLIGLFASGEWRILHGEMQGFGKGGFAYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIASVIVFHDKMNGVKIVAMLMAIWGFASYIYQNYLDDSKARRTQTRETESQNDSV 389
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Match: M5WZV3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007245mg PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 5.411e-88 Identity = 164/225 (72.89%), Postives = 201/225 (89.33%), Query Frame = -2 Query: 154 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIYQNYLDDTKARKSE---SQSHTD 819 LAFNAVFSY +NSQK TALILNSV+I+S SAALIAV++DS GP+GVSK K+++GFICTLGASA+YSLLLSLMQL+FQKVL+KET++VVLEMQIYT+LVA+C +T GLF SGEW+ L EM+ F GRVSYV+TLVW AV+WQVC+VGVVGLIF VSSLFSNVISTLSLA+TP+AA+++FHD+M+GVK+IAMLLA+ GF +YIYQNYLDD+K R+ + ++SH D Sbjct: 141 LAFNAVFSYFINSQKFTALILNSVIIVSFSAALIAVSDDSSGPAGVSKWKHILGFICTLGASAIYSLLLSLMQLTFQKVLKKETFSVVLEMQIYTALVASCAATVGLFASGEWRTLHGEMENFGEGRVSYVMTLVWTAVAWQVCSVGVVGLIFVVSSLFSNVISTLSLAVTPIAAVIIFHDKMDGVKIIAMLLAIWGFATYIYQNYLDDSKVRRRQTGVTESHND 365
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP16_ARATH (Probable purine permease 16 OS=Arabidopsis thaliana GN=PUP16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.787e-13 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = -2 Query: 286 FQKVL-------RKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKGFKSGRVSYVLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLV 594 F KVL K+ + +VLEMQI S +AT + T GLF SGE+K L+ + + FK G+ Y+L+LV A+SWQV AVG++GL+ VS LF++V+ + +P+ ALLV Sbjct: 223 FDKVLVKTKRYGNKKVFRMVLEMQICVSFIATLICTVGLFASGEFKELKGDSERFKKGKTYYILSLVGLALSWQVWAVGLLGLVLLVSGLFADVV---HMGASPVVALLV 329
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Match: PUP4_ARATH (Probable purine permease 4 OS=Arabidopsis thaliana GN=PUP4 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.405e-10 Identity = 62/205 (30.24%), Postives = 111/205 (54.15%), Query Frame = -2 Query: 211 LAFNAVFSYLLNSQKLTXXXXXXXXXXXXXXXXXXXNEDSDGPSGVSKGKYLVGFICTXXXXXXXXXXXXXXXXSFQKVLRKETYNVVLEMQIYTSLVATCVSTAGLFGSGEWKGLQDEMKG-FKSGRVSY-VLTLVWAAVSWQVCAVGVVGLIFAVSSLFSNVISTLSLAITPLAALLVFHDEMNGVKVIAMLLALCGFCSYIY 819 L F + S ++ QK+T LN VV+L+LS+ L+A++ D PSG++K KY +G++ T+GA L++L L + + ++ V Y +V+E+Q+ AT +T G+ G +K + E F G Y ++ V+WQ+ G+++ S + + T LA+ + ++ + D GVK+++ +L + GF SY Y Sbjct: 135 LVFTLILSRIIVKQKITFSNLNCVVLLTLSSVLLALDSSKDKPSGLTKTKYFIGYVSTIGAGLLFALYLPVTEKLYRTVY---CYAMVMEVQLVMEFAATVFATIGMACEGGFKEMVKEANHVFTKGPTFYWTFAILANVVTWQLSFAATSGMVYLTSGITGGICMTALLAMNVIGGVVAYGDVFGGVKIVSTVLCIWGFSSYTY 336 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006205 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 22
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006205 ID=g.arboreum_cottongen_reftransV1_0006205; Name=g.arboreum_cottongen_reftransV1_0006205; organism=Gossypium arboreum; type=contig; length=820bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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