g.arboreum_cottongen_reftransV1_0007657, g.arboreum_cottongen_reftransV1_0007657 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0007657
Unique Name	g.arboreum_cottongen_reftransV1_0007657
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	2688

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr6	chromosome	g.arboreum_cottongen_reftransV1_0007657:1..2688 . Chr6:171264..174366 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Match: I1JX76_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0
Identity = 511/746 (68.50%), Postives = 591/746 (79.22%), Query Frame = 1

Query:  247 MPGVLMDEIKEEGVLNEMKG-TSARVKENSVSKRTP-----SPQSPRGDRMVQ------VETSIEQLYENVCDMQSSDQSPSRQSFGSYGEESRIDSELHHLAGGESTEVEIMKGEEQEVDKPEDDSRXXXXXXXXXXXXXXXXXLLDKPRPTGVKSISSGDVKKVSR---TQLDSEASTKPNV--KGKTPPEKPPINKGKVKTLKKPNTGVLLMKKGKGSKL-----QNGTEDASESGLGNPDLGPFLLKQARDLVSAGDNPQKALELALRAAKSYELCSSGKPNLELVMCLHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVESRKARSLETLLDANPHHNSN 2418
            MPG++ + +++EG  NEM G   +  KE     ++P     SP   +GD          VE SIEQLYENVCDMQSSDQSPSRQSFGS G+ESRIDSEL HL GG   EVEIM+ E  E  +PE  S S  SS  G  S+ KK   +D+ +     + SSG  +K  +   +Q++S+ +T P +  KG++P  K PI +   K L+KP  GV  +K  K S +     QN  E  +ES L  P+  P LLKQARDL+S+GDNPQKAL+LAL+A + +E   +GKP+LELVMCLHVTAAIYCSLGQY EAIP+LE+SIEIPVI E Q+HALAKFAGHMQLGDTYAMLGQLENSI CY+TG EVQ+++LGETDPRVGETCRY+AEA++QALQFDEA+RLCQMALDIH+ N +  S+EEAADRRLMGLICETKG+HE ALEHLVLA MAMV N QEAEVASVDCSIGD YLSLSRYDEA FAYQKALT FKT+KGENHPA+G VFVRLADLY RTGK+RES SYCENAL+IYE PMPG+P EEIA+GLT++S IYESMN+L+QA+KLLQKAL+IY+D PGQQST+AGIEAQMGVMYYMLGNYSESYN+   AISKLR   +KKS+FFGIALNQMGLACVQRYA+ EA ELFEEAKSILEQE GPYHP+TL VYSNLAGTYDAIGRLDDA++ILEYVV TREEKLGTAN EVDDEK+RL ELLKEAGRV SRKARSLE LLD N H  +N
Sbjct:    6 MPGIVTNGVQDEGGSNEMNGDQDSPFKEPLNLVKSPRGGSVSPGRGQGDDGANFGGDGVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKEPEGSSSSEISSALGGLSHDKKLDQVDEIQEVQPAATSSGSTEKSVKALNSQVESD-NTLPKLTSKGRSPLSKAPIPRKNGKPLRKPIGGVTGVKNTKNSPIGKSVSQNRVESMAESALEKPERAPVLLKQARDLISSGDNPQKALDLALQAMELFEKFGNGKPSLELVMCLHVTAAIYCSLGQYAEAIPILERSIEIPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGLEVQKQILGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANNSAPSVEEAADRRLMGLICETKGNHETALEHLVLASMAMVNNGQEAEVASVDCSIGDTYLSLSRYDEAAFAYQKALTVFKTSKGENHPAVGLVFVRLADLYNRTGKIRESKSYCENALKIYENPMPGVPLEEIASGLTNISTIYESMNELEQALKLLQKALEIYSDTPGQQSTIAGIEAQMGVMYYMLGNYSESYNTLKDAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEQEYGPYHPETLGVYSNLAGTYDAIGRLDDAIQILEYVVNTREEKLGTANPEVDDEKRRLGELLKEAGRVRSRKARSLENLLDGNAHAANN 750

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Match: A0A0B2REY3_GLYSO (Nephrocystin-3 OS=Glycine soja GN=glysoja_017446 PE=4 SV=1)

HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0
Identity = 511/746 (68.50%), Postives = 591/746 (79.22%), Query Frame = 1

Query:  247 MPGVLMDEIKEEGVLNEMKG-TSARVKENSVSKRTP-----SPQSPRGDRMVQ------VETSIEQLYENVCDMQSSDQSPSRQSFGSYGEESRIDSELHHLAGGESTEVEIMKGEEQEVDKPEDDSRXXXXXXXXXXXXXXXXXLLDKPRPTGVKSISSGDVKKVSR---TQLDSEASTKPNV--KGKTPPEKPPINKGKVKTLKKPNTGVLLMKKGKGSKL-----QNGTEDASESGLGNPDLGPFLLKQARDLVSAGDNPQKALELALRAAKSYELCSSGKPNLELVMCLHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVESRKARSLETLLDANPHHNSN 2418
            MPG++ + +++EG  NEM G   +  KE     ++P     SP   +GD          VE SIEQLYENVCDMQSSDQSPSRQSFGS G+ESRIDSEL HL GG   EVEIM+ E  E  +PE  S S  SS  G  S+ KK   +D+ +     + SSG  +K  +   +Q++S+ +T P +  KG++P  K PI +   K L+KP  GV  +K  K S +     QN  E  +ES L  P+  P LLKQARDL+S+GDNPQKAL+LAL+A + +E   +GKP+LELVMCLHVTAAIYCSLGQY EAIP+LE+SIEIPVI E Q+HALAKFAGHMQLGDTYAMLGQLENSI CY+TG EVQ+++LGETDPRVGETCRY+AEA++QALQFDEA+RLCQMALDIH+ N +  S+EEAADRRLMGLICETKG+HE ALEHLVLA MAMV N QEAEVASVDCSIGD YLSLSRYDEA FAYQKALT FKT+KGENHPA+G VFVRLADLY RTGK+RES SYCENAL+IYE PMPG+P EEIA+GLT++S IYESMN+L+QA+KLLQKAL+IY+D PGQQST+AGIEAQMGVMYYMLGNYSESYN+   AISKLR   +KKS+FFGIALNQMGLACVQRYA+ EA ELFEEAKSILEQE GPYHP+TL VYSNLAGTYDAIGRLDDA++ILEYVV TREEKLGTAN EVDDEK+RL ELLKEAGRV SRKARSLE LLD N H  +N
Sbjct:    6 MPGIVTNGVQDEGGSNEMNGDQDSPFKEPLNLVKSPRGGSVSPGRGQGDDGANFGGDGVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKEPEGSSSSEISSALGGLSHDKKLDQVDEIQEVQPAATSSGSTEKSVKALNSQVESD-NTLPKLTSKGRSPLSKAPIPRKNGKPLRKPIGGVTGVKNTKNSPIGKSVSQNRVESMAESALEKPERAPVLLKQARDLISSGDNPQKALDLALQAMELFEKFGNGKPSLELVMCLHVTAAIYCSLGQYAEAIPILERSIEIPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGLEVQKQILGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHKANNSAPSVEEAADRRLMGLICETKGNHETALEHLVLASMAMVNNGQEAEVASVDCSIGDTYLSLSRYDEAAFAYQKALTVFKTSKGENHPAVGLVFVRLADLYNRTGKIRESKSYCENALKIYENPMPGVPLEEIASGLTNISTIYESMNELEQALKLLQKALEIYSDTPGQQSTIAGIEAQMGVMYYMLGNYSESYNTLKDAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEQEYGPYHPETLGVYSNLAGTYDAIGRLDDAIQILEYVVNTREEKLGTANPEVDDEKRRLGELLKEAGRVRSRKARSLENLLDGNAHAANN 750

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Match: A0A068UXN5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_64 OS=Coffea canephora GN=GSCOC_T00035914001 PE=4 SV=1)

HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0
Identity = 499/728 (68.54%), Postives = 587/728 (80.63%), Query Frame = 1

Query:  247 MPGVLMDEIKEEGVLNEMK--GTSARVKENSVSKR-------TPSPQSPRGDRMVQ--VETSIEQLYENVCDMQSSDQSPSRQSFGSYGEESRIDSELHHLAGGESTEVEIMKGEEQEVDKPEDDSRXXXXXXXXXXXXXXXXXLLDKPRPTGVKSISSGDVKKVSRTQLDSEASTKPNVKGKTPPEKPPINKGKVKTLKKPNTGVLLMKKGKGSKLQNGTEDASESGLGNPDLGPFLLKQARDLVSAGDNPQKALELALRAAKSYELCSSGKPNLELVMCLHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVESRKARSLETLLDA 2397
            MPG +M+   EEG  +E+   G S   KEN V+ +       T +PQ+     +V+  VETSIEQLYENVC+MQSSD SPSR SFGS GEESRIDSEL HL GGE  EVEIM+ EE+ V KPE+D                     D      +K  SS  +  +  +Q  ++ + K   KG T         G + + K+ N+         G KLQNG+ED+SESGL NPDLGPFLLKQARDL+S+GDNPQKAL+LALRAAKS+E C+ GKP+L+LVM LHVTAAIYC+LGQY++AIP+LE SIEIPVIEEGQ+HALAKFAG+MQLGDTYAMLGQLENSI  YSTG EVQ+R+LG++DPRVGETCRYLAEAH+QALQFDEA++LCQMALD+HRE+G+PASLEEAADRRLMGLICE+KGDHEAALEHLVLA M++ AN QEAEVASVDCSIGD YLSL+RYDEA+FAYQKALTA K+ KGEN+PA+ SVFVRLADLY +TGK +ES SYCENALRI+ KP PG  PEEIA+GLTD+SAIYESMN+L+QA+KLLQKALK+Y++ PGQQ+T+AGIEAQMGV+YYMLGNYS+SYNSF SA+ KLR C DKKSAFFGIALNQMGLACVQRYAI EA++LFEE++SILEQE GPYHPDTL VYSNLAGTYDA+GRL+DA+++LE+VV  REEKLGTAN +VDDEKKRLAELLKEAG+V +RKARSLE LLD+
Sbjct:    1 MPGFVMEVNHEEGPASEVNENGNSTNGKENVVANKSLNEGLTTQNPQNGGTGNVVEGEVETSIEQLYENVCEMQSSDHSPSRVSFGSEGEESRIDSELRHLVGGEMREVEIME-EEEGVRKPEND---------------------DSHSDIAIKKESS-SIGNLENSQSGNKRNEKNQKKGIT---------GGIFSKKQSNS------PSGGLKLQNGSEDSSESGLDNPDLGPFLLKQARDLISSGDNPQKALDLALRAAKSFERCADGKPSLDLVMSLHVTAAIYCNLGQYSDAIPVLEHSIEIPVIEEGQDHALAKFAGYMQLGDTYAMLGQLENSIMSYSTGLEVQRRILGDSDPRVGETCRYLAEAHVQALQFDEAEKLCQMALDLHRESGSPASLEEAADRRLMGLICESKGDHEAALEHLVLASMSLAANGQEAEVASVDCSIGDTYLSLNRYDEAIFAYQKALTALKSAKGENNPAVASVFVRLADLYNKTGKFKESKSYCENALRIFGKPPPGFAPEEIASGLTDISAIYESMNELEQALKLLQKALKMYDNAPGQQNTIAGIEAQMGVLYYMLGNYSDSYNSFKSAVLKLRACGDKKSAFFGIALNQMGLACVQRYAINEALDLFEESRSILEQEYGPYHPDTLGVYSNLAGTYDAVGRLEDAIKMLEFVVGMREEKLGTANPDVDDEKKRLAELLKEAGKVRNRKARSLENLLDS 690

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BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Match: V7B0T3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G179000g PE=4 SV=1)

HSP 1 Score: 953.355 bits (2463), Expect = 0.000e+0
Identity = 501/745 (67.25%), Postives = 584/745 (78.39%), Query Frame = 1

Query:  247 MPGVLMDEIKEEGVLNEMKGTSARVKENSVSK-RTP----SPQSPRGDRM---VQ--VETSIEQLYENVCDMQSSDQSPSRQSFGSYGEESRIDSELHHLAGGESTEVEIMKGEEQEVDKPEDDSRXXXXXXXXXXXXXXXXXLLD-----KPRPTGVKSISSGDVKKVSRTQLDSEASTKPNVKGKTPPEKPPINKGKVKTLKKPNTGVLLMKKGKGSKL------QNGTEDASESGLGNPDLGPFLLKQARDLVSAGDNPQKALELALRAAKSYELCSSGKPNLELVMCLHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVESRKARSLETLLDANPHHNSN 2418
            M G++ +E+++EG  NEM G      + ++S+ ++P    SP    GD     V+  VE SIEQLYENVCDMQSSDQSPSRQSFGS G+ESRIDSEL HL GG   EVEIM+ E  E   PE  S S  SS     +N KK   ++     +P  T   S     VK  S +++  + S K   KGK+P +KPPI K   +  +K ++G   +K  K S L      QN  E  +ES +  P+  P LLKQARD++S GDNP KAL+LAL+A + +E    GKP+LELVMCLHV AAIYCSLGQY EAIP+LE+SIEIPVIEE Q+HALAKFAGHMQLGDTYAMLGQLENSITCY+TG E+Q++VLGETDPRVGETCRY+AEA++QALQFDEA++LCQMALDIH+ N +  SLEEAADRRLMGL+C+TKG+HE+ALEHLVLA MAMVAN QE +VASVDCSIGD YLSLSRYDEAVFAYQKALTAFKT KGENHPA+G VFVRLADLY R GK+RES SYCE+AL+IYE P+PG+P EEIA+GLT++S IYESMN+L+QA+KLLQKAL+IYNDVPGQQST+AGIEAQMGVMYYMLG YSESY +  +AISKLR   +KKS+FFGIALNQMGLACVQRYA+ EA ELFEEAKSILE+E GPYHP+TL V SNLAGTYDAIGRLDDA++ILEYVV TREEKLGTAN EVDDEKKRL ELLKEAGRV SRK RSLE LLD N H  +N
Sbjct:    1 MSGIVTNEVRDEGEGNEMNGNRDSPSKETLSQVKSPRGSSSPGKGEGDTANFGVEEVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEGKGPERSSSSEISSGLDGLTNDKKVDQVNEIQEVQPAATSSGSSVK-SVKASSSSRVGPDTSPKSTAKGKSPLQKPPIEKKNGRHSRKQSSGGTGVKNLKNSPLGNKSVSQNRVEKRAESVVERPERAPLLLKQARDMISFGDNPHKALDLALQAMQLFEKLGDGKPSLELVMCLHVIAAIYCSLGQYGEAIPILERSIEIPVIEESQQHALAKFAGHMQLGDTYAMLGQLENSITCYNTGLELQKQVLGETDPRVGETCRYVAEANVQALQFDEAEKLCQMALDIHKTNNSAPSLEEAADRRLMGLVCDTKGNHESALEHLVLASMAMVANGQEGDVASVDCSIGDTYLSLSRYDEAVFAYQKALTAFKTNKGENHPAVGFVFVRLADLYNRIGKIRESKSYCESALKIYENPIPGVPLEEIASGLTNISTIYESMNELEQALKLLQKALEIYNDVPGQQSTIAGIEAQMGVMYYMLGKYSESYETLKTAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEKEYGPYHPETLGVCSNLAGTYDAIGRLDDAIQILEYVVSTREEKLGTANPEVDDEKKRLGELLKEAGRVRSRKTRSLENLLDGNAHTVNN 744

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Match: A0A0B2QDH5_GLYSO (Nephrocystin-3 OS=Glycine soja GN=glysoja_012230 PE=4 SV=1)

HSP 1 Score: 939.102 bits (2426), Expect = 0.000e+0
Identity = 504/748 (67.38%), Postives = 577/748 (77.14%), Query Frame = 1

Query:  247 MPGVLMDEIK-EEGVLNEMKGT-SARVKENSVSKRTP-----SPQSPRGDRMVQ------VETSIEQLYENVCDMQSSDQSPSRQSFGSYGEESRIDSELHHLAGGESTEVEIMKGEEQEVDK-PEDDSRXXXXXXXXXXXXXXXXXLLDKPRPTGVKSISSGDVKKVSRTQLD----SEASTKPNVKGKTPPEKPPINKGKVKTLKKPNTGVLL-MKKGKGSKL-----QNGTEDASESGLGNPDLGPFLLKQARDLVSAGDNPQKALELALRAAKSYELCSSGKPNLELVMCLHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVESRKARSLETLLDANPHHNSN 2418
            MPG++ + +  +EG  N+M G   +  KE     ++P     SPQ  +GD          VE SIEQLYENVCDMQSSDQSPSRQSFGS G+ESRIDSEL HL GG   EVEIM+ E  E    PE  S S  SS  G  SN KK   +D+ +     + SSG  +K  +  +        S K   KGK P  K PI +   K L+K  +G    +K  K S +     +N  E  +ES L  P+  P LLKQARDL+S+GDNP KAL+LAL+A K +E   + KP+LELVMCLHVTAAIYCSLGQY EAIP+LE+SIE+PVI E Q+HALAKFAGHMQLGDTYAMLGQLENS  CY+TG EVQ+++LGETDPRVGETCRY+AEA++QALQFDEA+RLCQMALDIH  N +  SLEEAADRRLMGLICETKG+HE ALEHLVLA MAMV+N QEAEVASVDCSIGD YLSLSRYDEAVFAYQKALT FKT+KGENHPA+G VFVRLADLY RTGK+RES SYCE+AL+IYE PMPGIPPEEIA+GLT++S IYESMN+L+ A+KLLQKAL+IYND PGQQST+AGIEAQMGVMYYMLGNYS+SYN+  +AISKLR   +KKS+FFGIALNQMGLACVQRYA+ EA ELFEEAKSILEQE GPYHP+TL V SNLA TYDAIGRLDDA++ILEYVV TREEKLGTAN EVDDEK+RL ELLKEAGRV SRK RSLE LLD N H  +N
Sbjct:    1 MPGIVRNGVHHDEGGSNDMNGDHDSTSKEPLNLVKSPRGGSVSPQRGQGDDGANFGGDEVVEPSIEQLYENVCDMQSSDQSPSRQSFGSDGDESRIDSELRHLVGGRMREVEIMEEEVGEEKGLPEGSSSSEISSALGGLSNDKKLNQVDEIQEVQPAATSSGSSEKSIKASISMVGPDNTSPKSTSKGKIPLSKAPIPRNNGKPLRKQISGATTGVKTTKNSPMGKSVSRNRAESTAESALEKPERAPVLLKQARDLISSGDNPHKALDLALQAMKLFEKFGNEKPSLELVMCLHVTAAIYCSLGQYGEAIPILERSIEVPVIGESQQHALAKFAGHMQLGDTYAMLGQLENSTMCYTTGLEVQKQILGETDPRVGETCRYVAEANVQALQFDEAERLCQMALDIHIANNSAPSLEEAADRRLMGLICETKGNHETALEHLVLASMAMVSNDQEAEVASVDCSIGDTYLSLSRYDEAVFAYQKALTVFKTSKGENHPAVGLVFVRLADLYNRTGKIRESKSYCESALKIYENPMPGIPPEEIASGLTNISTIYESMNELEHALKLLQKALEIYNDTPGQQSTIAGIEAQMGVMYYMLGNYSKSYNTLKNAISKLRAIGEKKSSFFGIALNQMGLACVQRYALSEATELFEEAKSILEQEYGPYHPETLGVSSNLAATYDAIGRLDDAIQILEYVVNTREEKLGTANPEVDDEKRRLGELLKEAGRVRSRKTRSLENLLDGNAHAANN 748

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: NPHP3_XENLA (Nephrocystin-3 OS=Xenopus laevis GN=nphp3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.062e-10
Identity = 49/195 (25.13%), Postives = 89/195 (45.64%), Query Frame = 1

Query: 1192 QLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKG--DHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYE 1770
            +LG  Y +   LE + T      E+++RVLG   P   ++   LA  + +  Q+D+A+ L + ALDI R   +P     A   + + ++ + KG  D    L  L +         +   VA+   ++   Y  + + D+A+  Y++A+  ++ + G  HP +G     LA L Y  G   ++    + A+ I E
Sbjct: 1071 ELGVLYYLQNNLETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELAVDIRQKSFGPKHPSVATALVNLAVLYCQMKKQDDALPLYERAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDYEKAAELYKRAMEIKE 1265

HSP 2 Score: 63.1586 bits (152), Expect = 1.144e-8
Identity = 72/340 (21.18%), Postives = 132/340 (38.82%), Query Frame = 1

Query: 1564 SIGDAYLSLSRY-------DEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEA-------------------------QMGVMYYMLGNYSESYNSF-------------------GSAISKLRICRDKKSAF------------------------FGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVE 2358
            S+ D Y +L R+        +AV   Q++L   +T    +HP++     +LA +Y ++ K   +    + AL I E    G     +A  L  ++ +Y+  N  +QA +L +K+LKI      ++ ++ G                            ++GV+YY+  N  E+  +F                     +I+ L    ++K  +                            +  + +   ++  + +AV L+E A  I ++  GP HP   +   NLA  Y  + + DDA+ + E  ++  E+ LG  +  V +  K LA L  E G  E
Sbjct:  914 SLADLYETLGRFLKDLGLLSQAVTPLQRSLEIRETALDPDHPSVAQSLHQLAGVYMQSKKFGNAEQLYKQALEISENAY-GSEHLRVARELDALAVLYQKQNKFEQAEQLRKKSLKIRQKSARRKGSMYGFALLRRRALQLEELTLGKDTSDNARTLNELGVLYYLQNNL-ETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELAVDIRQKSFGPKHPSVATALVNLAVLYCQMKKQDDALPLYERAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDYE 1251

HSP 3 Score: 58.9214 bits (141), Expect = 2.051e-7
Identity = 81/380 (21.32%), Postives = 149/380 (39.21%), Query Frame = 1

Query: 1150 EGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYN-----DVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTRE 2274
            EG+E   +    +  LG     LG L  ++T      E+++  L    P V ++   LA  +MQ+ +F  A++L + AL+I         L  A +   + ++ + +   E A               ++    S+      A    S Y  A+   ++AL   + T G++          L  LYY    L  + ++ + +L + E+ +    P+  A  + +++A+Y      D+A +L ++AL I       D P    TV      + V+Y   G   ++   +  A+   +     K      AL  + +   Q     +A+ L+E A  I E   G  HP       NLA      G  + A E+ +  ++ +E
Sbjct:  907 EGEEKMTSLADLYETLGRFLKDLGLLSQAVTPLQRSLEIRETALDPDHPSVAQSLHQLAGVYMQSKKFGNAEQLYKQALEISENAYGSEHLRVARELDALAVLYQKQNKFEQA---------------EQLRKKSLKIRQKSARRKGSMYGFALLR-RRALQLEELTLGKDTSDNARTLNELGVLYYLQNNLETAETFLKRSLEMRERVLGADHPD-CAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVK----HLAVLYKRKGKLDKAVPLYELAVDIRQKSFGPKHPSVATALVNLAVLYCQMKKQDDALPLYERAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDYEKAAELYKRAMEIKE 1265

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: NPHP3_HUMAN (Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.302e-10
Identity = 59/278 (21.22%), Postives = 107/278 (38.49%), Query Frame = 1

Query: 1567 IGDAYLSLSRY-------DEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEA-------------------------QMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEV 2304
            + D Y +L R+        +A+   Q++L   +T    +HP +     +LA +Y +  K   +    + AL I E       P   A  L  ++ +Y+  N  +QA    +K+ KI+     ++  + G                            ++GV+YY+  N   +      ++                +LN +   C ++    +A EL+E A  I  +   P HP       +LA  Y  +G+LD AV + E  V+ R++  G  +  V
Sbjct:  942 LADLYETLGRFLKDLGLLSQAIVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPY-TARELEALATLYQKQNKYEQAEHFRKKSFKIHQKAIKKKGNLYGFALLRRRALQLEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSV 1218

HSP 2 Score: 62.3882 bits (150), Expect = 1.914e-8
Identity = 56/237 (23.63%), Postives = 100/237 (42.19%), Query Frame = 1

Query: 1192 QLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEA---ALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKI 1893
            +LG  Y +   LE +        E+++RVLG   P   ++   LA    +  Q+D+A+ L + ALDI R    P                    DH +    ++HL +                        Y  + + D+AV  Y+ A+   + + G  HP++ +  V LA LY +  K  E+    E AL+IYE  +  + P  +   L +++ +     D ++A +L ++A++I
Sbjct: 1098 ELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYDKAEELYERALDIRRRALAP--------------------DHPSLAYTVKHLAI-----------------------LYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHVEALPLYERALKIYEDSLGRMHP-RVGETLKNLAVLSYEGGDFEKAAELYKRAMEI 1290

HSP 3 Score: 57.7658 bits (138), Expect = 4.815e-7
Identity = 60/295 (20.34%), Postives = 117/295 (39.66%), Query Frame = 1

Query: 1546 VASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMP--------------GIPPEEIAAG---------LTDVSAIYESMNDLDQAIKLLQKALKIYNDVPG-QQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVE 2358
            VA     +   Y+   ++  A   Y++AL   +   G +HP        LA LY +  K  ++  + + + +I++K +                +  EE+  G         L ++  +Y   N+L+ A + L+++L++   V G      A     +  +      Y ++   +  A+   R             +  + +   +   + +AV L+E A  I ++  GP HP   +   NLA  Y  + +  +A+ + E  ++  E+ LG  +  V +  K LA L  E G  E
Sbjct:  984 VAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYGADHPYTARELEALATLYQKQNKYEQAEHFRKKSFKIHQKAIKKKGNLYGFALLRRRALQLEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHVEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEGGDFE 1278

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: NPHP3_XENTR (Nephrocystin-3 OS=Xenopus tropicalis GN=nphp3 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.897e-10
Identity = 58/253 (22.92%), Postives = 110/253 (43.48%), Query Frame = 1

Query: 1192 QLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMG 1950
            +LG  Y +   LE + T      E+++RVLG   P   ++   LA  + +  Q+D+A+ L + ALDI R   +P     A   + + ++ + KG                                        + D+AV  Y+ A+   + + G  HP++ +  V LA LY +  K  E++   E A++IYE  +  + P  +   L +++ +     D ++A +L ++A++I       +++V G +A  G
Sbjct: 1082 ELGVLYYLQNNLETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKG----------------------------------------KLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKQAEASPLYERAMKIYEDSLGRMHP-RVGETLKNLAVLRYEEGDFEKAAELYKRAMEIKET----ETSVLGAKAHSG 1289

HSP 2 Score: 56.9954 bits (136), Expect = 7.591e-7
Identity = 70/340 (20.59%), Postives = 130/340 (38.24%), Query Frame = 1

Query: 1564 SIGDAYLSLSRY-------DEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEA-------------------------QMGVMYYMLGNYSESYNSF-------------------GSAISKLRICRDKKSAF------------------------FGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVE 2358
            S+ D Y +L R+        +AV   Q++L   +T    +HP++     +LA +Y ++ K   +    + AL I E    G     +A  L  ++ +Y+  N  +QA +L +K+LKI      ++ ++ G                            ++GV+YY+  N  E+  +F                     +I+ L    ++K  +                            +  + +   ++  + +AV L+E A  I ++  GP HP   +   NLA  Y  + +  +A  + E  ++  E+ LG  +  V +  K LA L  E G  E
Sbjct:  925 SLADLYETLGRFLKDLGLLSQAVTPLQRSLEIRETALDPDHPSVAQSLHQLAGVYVQSKKFGNAEQLYKQALEISENAY-GSEHMRVARELDALAVLYQKQNKFEQAEQLRKKSLKIRQKSARRKGSMYGFALLRRRALQLEELTLGKDTSDNARTLNELGVLYYLQNNL-ETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKQAEASPLYERAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDFE 1262

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: KLC_DROME (Kinesin light chain OS=Drosophila melanogaster GN=Klc PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.029e-9
Identity = 52/188 (27.66%), Postives = 88/188 (46.81%), Query Frame = 1

Query: 1438 RRLMGLICE--TKGDHEAA--LEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPG-QQSTVAGIEAQMGVMYYMLGNYSES 1986
            R L  L+ +  ++G +E A  L    L  +   +     +VA++   +   Y   ++Y EA      AL+    T GENHPA+ +    LA LY + GK +++   C+ AL I EK +    P ++A  L +++ + ++    D+  K  Q+AL IY    G     VA  +  +   Y   G Y+E+
Sbjct:  187 RTLHNLVIQYASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHP-DVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEA 373

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: KLC_CAEEL (Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=2 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 3.472e-9
Identity = 62/241 (25.73%), Postives = 108/241 (44.81%), Query Frame = 1

Query: 1294 PRVGETCRYLA-----EAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICE--TKGDHEAA--LEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPG-QQSTVAGIEAQMGVMYYMLGNYSES 1986
            P   ET + L      E  M A QF++     QMA   +     PA L     R L  L+ +  ++G +E A  L    L  +   +     +VA++   +   Y   ++Y EA     +AL+  +   GE+HPA+ +    LA L+ + GK +++   C+ AL I EK +    P ++A  L +++ + ++    ++  K  ++AL+IY    G     VA  +  +   Y   G Y E+
Sbjct:  159 PVTNETLQELGFGPEDEEDMNASQFNQPTPANQMAASANVGYEIPARL-----RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEALSIREKCLGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREKVLGDDHP-DVAKQLNNLALLCQNQGKYEEVEKYYKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEA 393

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: NPHP3_DANRE (Nephrocystin-3 OS=Danio rerio GN=nphp3 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 6.480e-9
Identity = 48/195 (24.62%), Postives = 88/195 (45.13%), Query Frame = 1

Query: 1192 QLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAA--LEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYE 1770
            +LG  Y +   L+ +    +   E++QRVLG   P   ++   LA  H +  +++ A+ L + ALDI +    P     A   + + ++ + +G  E A  L  L L         +   VA+   ++   Y  L ++ +A+  Y++AL  ++ + G  HP +G     LA L Y  G   ++    + A+ I E
Sbjct: 1076 ELGVLYYLQNNLDAAKLFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHSERKEYESAEELYERALDIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATALVNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAELYKRAMEIKE 1270

HSP 2 Score: 61.2326 bits (147), Expect = 4.806e-8
Identity = 73/338 (21.60%), Postives = 128/338 (37.87%), Query Frame = 1

Query: 1567 IGDAYLSLSRY-------DEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEA-------------------------QMGVMYYMLGNY-------------------------SESYNSFGSAISKL-----------RICRDKKSAF------FGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVE 2358
            + + Y +L R+        +AV   Q++L   +T    +HP++     +LA +Y    K   +    + A+ I E    G     +A  L  +S +Y+  N  +QA KL ++++KI      Q+  + G                            ++GV+YY+  N                          ++S N+  +  S+            R    +K A           L  + +   +R  +++AV L+E A  I E+  GP HP   +   NLA  Y  + +  DA+ + E  ++  E+ LG  +  V +  K LA L  E G  E
Sbjct:  920 LANLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPSVAQSLHQLAGVYVHWRKFGNAEQLYKQAMEICENAY-GPEHSTVARELDSLSLLYQKQNKYEQAEKLRKRSVKIRQKTARQKGHMYGFALLKRRALQLEELTLGKDSTDCAKTLNELGVLYYLQNNLDAAKLFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHSERKEYESAEELYERALDIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATALVNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFE 1256

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: NPHP3_MOUSE (Nephrocystin-3 OS=Mus musculus GN=Nphp3 PE=1 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 1.457e-8
Identity = 93/415 (22.41%), Postives = 163/415 (39.28%), Query Frame = 1

Query: 1150 EGQEHALAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGL--ICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAY----QKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPM-PGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYN-----DVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTREEKLGTANSEVDDEKKRLAELLKEAGRVE 2358
            EG+E+ L     +  LG     LG L  ++       E+++  L    PRV ++   LA  ++Q  +F +A++L + AL+I  EN   A    AA R L  L  +   +  +E A EH    R   V   Q+A                +R   +++ +    ++AL   + T G++ P        L  LY+    L  +  + + +L + E+ + P  P  + A  L +++A+       ++A +L ++AL I       D P    TV      + ++Y   G                                           + +AV L+E A  I ++  GP HP   +   NLA  +  + +  +A+ + E  ++  E+ LG  +  V +  K LA L  E G  E
Sbjct:  929 EGEENMLCLADLYETLGRFLKDLGLLSQAVVPLQRSLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFGDAEQLYKQALEI-SENAYGADHPHAA-RELEALATLYHKQNKYEQA-EHF---RKKSVIIRQQA----------------TRRKGSLYGFALLRRRALQLEELTLGKDKPENARTLNELGVLYFLQNNLETAEQFLKRSLEMRERVLGPDHP--DCAQSLNNLAALCNEKKQYEKAEELYERALDIRRRALAPDHPSLAYTVK----HLAILYKKTGK------------------------------------------VDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLHSQMKKHSEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEEGNFE 1273

HSP 2 Score: 59.6918 bits (143), Expect = 1.166e-7
Identity = 46/195 (23.59%), Postives = 85/195 (43.59%), Query Frame = 1

Query: 1192 QLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKG--DHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYE 1770
            +LG  Y +   LE +        E+++RVLG   P   ++   LA    +  Q+++A+ L + ALDI R    P     A   + + ++ +  G  D    L  L +         +   VA+   ++   +  + ++ EA+  Y++AL  ++ + G  HP +G     LA L Y  G   ++    + A+ I E
Sbjct: 1093 ELGVLYFLQNNLETAEQFLKRSLEMRERVLGPDHPDCAQSLNNLAALCNEKKQYEKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKTGKVDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLHSQMKKHSEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEEGNFEKAAELYKRAMEIKE 1287

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: KLC_DORPE (Kinesin light chain OS=Doryteuthis pealeii PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.841e-8
Identity = 66/250 (26.40%), Postives = 101/250 (40.40%), Query Frame = 1

Query: 1579 YLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPM-PGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEILEYVVQTR--EEKLGTANSEVDDEKK 2319
            Y S  RY+ AV   ++AL   + T G +HP + ++   LA +Y   GK +E+ +   +AL I EK + P  P   +AA L +++ +Y        A  L ++AL I   V G                                         K        LN + L C  +   +E    ++ A  I ++E GP  P+     +NLA  Y   G+   A EIL   V TR  E++ G    +VDD+ K
Sbjct:  230 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQGKYKEAANLLNDALGIREKTLGPDHPA--VAATLNNLAVLYGKRGKYKDAEPLCKRALVIREKVLG-----------------------------------------KDHPDVAKQLNNLALLCQNQGKYEEVERYYQRALEIYQKELGPDDPNVAKTKNNLASAYLKQGKYKQA-EILYKEVLTRAHEKEFG----KVDDDNK 431

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: KLC1_PONAB (Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 1.616e-7
Identity = 54/249 (21.69%), Postives = 100/249 (40.16%), Query Frame = 1

Query: 1057 LHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHA-LAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRES-TSYCENALRIYEKPMPGIPPE 1797
            LH     Y S G+Y  A+PL +Q++E      G +H  +A     + L   Y    + +++    +    ++++ LG+  P V  T   LA  + +  ++ EA+ LC+ AL+I  +       + A     + L+C+ +G                                        +Y+E  + YQ+AL  ++T  G + P +      LA  Y + GK +++ T Y E   R +E+    +  E
Sbjct:  216 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILAL--VYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQG----------------------------------------KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDE 422

HSP 2 Score: 56.6102 bits (135), Expect = 7.869e-7
Identity = 58/248 (23.39%), Postives = 97/248 (39.11%), Query Frame = 1

Query: 1579 YLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEIL-EYVVQTREEKLGTANSEVDDEKK 2319
            Y S  RY+ AV   ++AL   + T G +HP + ++   LA +Y    K +++ +   +AL I EK +    P  +AA L +++ +Y       +A  L ++AL+I   V G                                         K        LN + L C  +   +E    ++ A  I + + GP  P+     +NLA  Y   G+   A  +  E + +  E + G+    VDDE K
Sbjct:  223 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP-AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG-----------------------------------------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGS----VDDENK 424

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Match: KLC1_RAT (Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.687e-7
Identity = 54/249 (21.69%), Postives = 99/249 (39.76%), Query Frame = 1

Query: 1057 LHVTAAIYCSLGQYNEAIPLLEQSIEIPVIEEGQEHA-LAKFAGHMQLGDTYAMLGQLENSITCYSTGFEVQQRVLGETDPRVGETCRYLAEAHMQALQFDEAQRLCQMALDIHRENGTPASLEEAADRRLMGLICETKGDHEAALEHLVLARMAMVANSQEAEVASVDCSIGDAYLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRES-TSYCENALRIYEKPMPGIPPE 1797
            LH     Y S G+Y  A+PL +Q++E      G +H  +A     + L   Y    + +++    +    ++++ LG   P V  T   LA  + +  ++ EA+ LC+ AL+I  +       + A     + L+C+ +G                                        +Y+E  + YQ+AL  ++T  G + P +      LA  Y + GK +++ T Y E   R +E+    +  E
Sbjct:  216 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILAL--VYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQG----------------------------------------KYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDE 422

HSP 2 Score: 56.9954 bits (136), Expect = 6.347e-7
Identity = 58/248 (23.39%), Postives = 97/248 (39.11%), Query Frame = 1

Query: 1579 YLSLSRYDEAVFAYQKALTAFKTTKGENHPAIGSVFVRLADLYYRTGKLRESTSYCENALRIYEKPMPGIPPEEIAAGLTDVSAIYESMNDLDQAIKLLQKALKIYNDVPGQQSTVAGIEAQMGVMYYMLGNYSESYNSFGSAISKLRICRDKKSAFFGIALNQMGLACVQRYAIKEAVELFEEAKSILEQECGPYHPDTLSVYSNLAGTYDAIGRLDDAVEIL-EYVVQTREEKLGTANSEVDDEKK 2319
            Y S  RY+ AV   ++AL   + T G +HP + ++   LA +Y    K +++ +   +AL I EK +    P  +AA L +++ +Y       +A  L ++AL+I   V G                                         K        LN + L C  +   +E    ++ A  I + + GP  P+     +NLA  Y   G+   A  +  E + +  E + G+    VDDE K
Sbjct:  223 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHP-AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG-----------------------------------------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGS----VDDENK 424

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
I1JX76_SOYBN	0.000e+0	68.50	Uncharacterized protein OS=Glycine max PE=4 SV=2	[more]
A0A0B2REY3_GLYSO	0.000e+0	68.50	Nephrocystin-3 OS=Glycine soja GN=glysoja_017446 P...	[more]
A0A068UXN5_COFCA	0.000e+0	68.54	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]
V7B0T3_PHAVU	0.000e+0	67.25	Uncharacterized protein OS=Phaseolus vulgaris GN=P...	[more]
A0A0B2QDH5_GLYSO	0.000e+0	67.38	Nephrocystin-3 OS=Glycine soja GN=glysoja_012230 P...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0007657 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 13


Match Name	E-value	Identity	Description
NPHP3_XENLA	4.062e-10	25.13	Nephrocystin-3 OS=Xenopus laevis GN=nphp3 PE=2 SV=...	[more]
NPHP3_HUMAN	6.302e-10	21.22	Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE=1 SV=1	[more]
NPHP3_XENTR	7.897e-10	22.92	Nephrocystin-3 OS=Xenopus tropicalis GN=nphp3 PE=2...	[more]
KLC_DROME	3.029e-9	27.66	Kinesin light chain OS=Drosophila melanogaster GN=...	[more]
KLC_CAEEL	3.472e-9	25.73	Kinesin light chain OS=Caenorhabditis elegans GN=k...	[more]
NPHP3_DANRE	6.480e-9	24.62	Nephrocystin-3 OS=Danio rerio GN=nphp3 PE=3 SV=1	[more]
NPHP3_MOUSE	1.457e-8	22.41	Nephrocystin-3 OS=Mus musculus GN=Nphp3 PE=1 SV=2	[more]
KLC_DORPE	1.841e-8	26.40	Kinesin light chain OS=Doryteuthis pealeii PE=2 SV...	[more]
KLC1_PONAB	1.616e-7	21.69	Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2...	[more]
KLC1_RAT	1.687e-7	21.69	Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 680..707
None	No IPR available	COILS	Coil	Coil	coord: 534..554
None	No IPR available	PFAM	PF13424	TPR_12	coord: 435..510 e-value: 1.2E-10 score: 41.4 coord: 605..673 e-value: 9.4E-11 score: 41.7
None	No IPR available	PANTHER	PTHR19959	KINESIN LIGHT CHAIN	coord: 44..64
None	No IPR available	PANTHER	PTHR19959:SF156	SUBFAMILY NOT NAMED	coord: 214..715 coord: 44..64
None	No IPR available	PANTHER	PTHR19959	KINESIN LIGHT CHAIN	coord: 214..715
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 478..511 e-value: 1.3 score: 18.0 coord: 604..637 e-value: 32.0 score: 10.5 coord: 354..387 e-value: 2.7 score: 17.0 coord: 562..595 e-value: 42.0 score: 9.5 coord: 646..679 e-value: 65.0 score: 7.8 coord: 436..469 e-value: 0.39 score: 19.8 coord: 269..302 e-value: 85.0 score: 6.8 coord: 521..554 e-value: 0.83 score: 18.7 coord: 312..345 e-value: 17.0 score: 12.9
IPR019734	Tetratricopeptide repeat	PFAM	PF13176	TPR_7	coord: 276..303 e-value: 0.0051 score: 16.6
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 530..552 e-value: 0.008 score: 16.2
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 646..679 score: 7.346
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 354..387 score: 5.576
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 562..595 score: 5.635
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 436..469 score: 8.791
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 269..302 score: 5.399
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 312..345 score: 5.723
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 478..511 score: 6.785
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 604..637 score: 5.871
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 521..554 score: 8.526
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 540..707 e-value: 3.9E-19 score: 68.2
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 221..341 e-value: 1.1E-7 score: 30.9
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 411..539 e-value: 8.9E-15 score: 53.9 coord: 350..410 e-value: 1.4E-11 score: 43.6
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 442..683 coord: 249..393
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 436..679 score: 17.21

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0007657 ID=g.arboreum_cottongen_reftransV1_0007657; Name=g.arboreum_cottongen_reftransV1_0007657; organism=Gossypium arboreum; type=contig; length=2688bp
GACATTTGTCGTTTTTATGAGAAACCCAGAAAAGATATCACCTTGTTTGT
TTCATGACTGTTTTATTGAGGTTGCTATAAAATTGGGTGTGTTACAAAAT
TTATGCTTTCTCTTGCTTGGATCTGGCGTTTCAATTGTTTGATAGGATAA
GATAGGATTGAATTGGAAACCAATTTAATTGAATTGAATTGGAAACCAAT
TTGGTGGTGATAAGTTTAGGATATTTGTGGGTTTTGGCACATACTGATGC
CAGGTGTTCTCATGGATGAAATTAAAGAAGAGGGTGTGTTGAATGAAATG
AAAGGGACTTCTGCACGTGTTAAGGAAAATTCGGTTTCCAAGAGAACACC
AAGTCCGCAAAGCCCTCGTGGTGATAGGATGGTTCAGGTTGAGACCTCCA
TTGAGCAGCTTTATGAGAATGTATGTGATATGCAGAGTTCTGATCAGTCA
CCTTCGAGGCAGAGCTTTGGATCATATGGTGAAGAGTCGAGGATTGATTC
GGAATTGCACCATCTTGCTGGAGGAGAGAGTACAGAAGTTGAGATAATGA
AAGGGGAGGAACAGGAGGTGGATAAACCAGAAGATGATAGTCGTAGTAAT
TCATCTTCTAAGAAGGGAAGCTCATCGAATGGTAAGAAGTCGGGGCTGTT
GGACAAGCCCCGACCCACAGGTGTAAAATCCATTTCTTCAGGTGATGTGA
AGAAAGTGTCTCGGACACAACTGGACTCTGAAGCATCAACAAAACCCAAT
GTTAAGGGGAAAACTCCACCTGAGAAACCTCCCATCAATAAGGGGAAAGT
TAAGACTCTGAAGAAACCAAACACGGGAGTCTTACTCATGAAGAAAGGGA
AAGGATCAAAGCTACAAAATGGAACCGAGGATGCTTCCGAGTCGGGGTTA
GGTAATCCTGATCTTGGGCCGTTTCTACTCAAACAAGCTAGGGATTTGGT
GTCTGCAGGAGACAATCCCCAGAAAGCTCTTGAACTAGCACTTCGAGCAG
CCAAATCGTATGAACTTTGTAGCAGTGGAAAACCCAATTTAGAATTGGTC
ATGTGTTTACATGTCACTGCAGCTATATATTGCAGCCTAGGCCAGTACAA
TGAGGCAATTCCTCTTCTTGAACAATCAATTGAGATTCCAGTGATTGAGG
AAGGCCAAGAGCATGCCCTGGCTAAGTTTGCTGGTCATATGCAGTTGGGT
GACACTTATGCCATGCTAGGACAGCTTGAGAACTCAATAACCTGTTACAG
CACTGGTTTTGAAGTCCAGCAACGAGTTCTTGGAGAAACAGATCCTAGAG
TTGGCGAGACATGCCGGTATTTGGCTGAAGCTCATATGCAGGCATTGCAA
TTTGATGAAGCTCAGAGGCTATGCCAAATGGCTCTTGACATTCACAGAGA
GAACGGTACGCCGGCTTCTCTTGAAGAGGCAGCAGATAGGAGGCTCATGG
GTCTCATATGTGAAACAAAGGGAGACCACGAAGCTGCTTTGGAGCATCTT
GTTTTAGCCCGTATGGCCATGGTGGCAAATAGCCAGGAGGCAGAGGTGGC
TTCTGTTGATTGCAGTATTGGAGATGCATACTTATCTTTGTCTCGATATG
ATGAAGCTGTTTTTGCCTATCAGAAAGCACTTACAGCTTTTAAGACAACT
AAAGGAGAGAATCATCCAGCGATTGGGTCAGTCTTTGTCCGGTTGGCTGA
TTTGTATTACAGGACAGGGAAATTAAGGGAATCAACATCATACTGCGAGA
ATGCCCTTCGAATCTATGAAAAGCCCATGCCAGGGATTCCCCCGGAGGAG
ATTGCCGCTGGCCTCACTGATGTTTCTGCCATCTATGAATCAATGAATGA
TCTTGATCAGGCAATCAAGTTGCTGCAGAAGGCCTTAAAAATATACAATG
ATGTCCCTGGTCAGCAAAGCACAGTAGCTGGAATTGAAGCTCAGATGGGA
GTTATGTACTACATGTTGGGGAATTATTCAGAATCTTACAACTCCTTCGG
CAGTGCCATTTCGAAGCTACGCATATGTAGAGACAAGAAATCTGCCTTCT
TCGGCATTGCTCTCAATCAAATGGGGCTGGCTTGTGTGCAACGCTATGCT
ATAAAGGAGGCTGTTGAGTTGTTTGAAGAAGCCAAAAGCATTTTAGAGCA
AGAGTGTGGACCGTACCACCCTGATACACTCAGCGTATACAGTAATCTCG
CAGGCACTTATGACGCAATTGGCAGGTTGGATGATGCCGTTGAAATACTG
GAGTATGTTGTTCAGACGAGAGAGGAAAAACTGGGGACAGCAAATTCTGA
GGTAGATGATGAGAAGAAAAGGTTGGCTGAACTATTAAAGGAAGCAGGAA
GAGTTGAGAGCAGAAAAGCCAGATCATTAGAAACCCTTCTTGATGCCAAC
CCTCATCATAATTCTAATGCTGAGCGATTTAAGGTATGAATATGCTAAAC
ATGAATTTATGTACTTTATAATATATTATAAATGGAGAAAGAAATGAAAG
AAAAAAGAACACAGAGCTATGTTTTCTTTTCCATTTTCTTTTTTTGTTGG
ATAGATTCTTGGCATGGAGATGGGTATATATAAATACTATATTGATAATA
AAAATGGGTGGACAGTGGGAGTTTGGGGGTGAAAGAAATGTACTATTTAT
TGTACTTTTATATTTGATTAAAGGTTACTTTTAAGTCA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0007657, g.arboreum_cottongen_reftransV1_0007657 (contig) Gossypium arboreum

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