g.arboreum_cottongen_reftransV1_0013307, g.arboreum_cottongen_reftransV1_0013307 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0013307
Unique Nameg.arboreum_cottongen_reftransV1_0013307
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1375
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr6chromosomeg.arboreum_cottongen_reftransV1_0013307:1..1375 .
Chr6:54404039..54409105 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: G7JN49_MEDTR (P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncatula GN=MTR_4g032220 PE=4 SV=2)

HSP 1 Score: 468.389 bits (1204), Expect = 6.521e-160
Identity = 252/350 (72.00%), Postives = 293/350 (83.71%), Query Frame = -1
Query:  275 MMGGSAIDDDWEFTSP---------SNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR--CAIL 1291
            MMGGS ++DDWE  S          +N  +TVVLVGRTGNGKSATGNSILGKK FKSRASSSGVTSSCE+Q   L DGQI+NVIDTPGLF+ SAGSEFIGKEIVKCID AKDGIHA+LVV SVR+RFS+EEE ALRSLQTLFGSKIV+YMIVVFTGGDELE++E+TL+DYLGRECP+ LK IL LCGNR VLFDNKTKDE KR  QVQ LL+ VN+++ QNGGQPYTDELFAELKKGA KL  +Q  V +L+GYS+ +ISE K+ ++++YEEQL  ITEM+ESKLKE T RLE+QLAEEQAARL+AE+ A+LAQ KS+DEIRKLR++LE+A    EELRK+  +  CAIL
Sbjct:    1 MMGGSYVEDDWELASSGSASEVQISANEARTVVLVGRTGNGKSATGNSILGKKVFKSRASSSGVTSSCEMQTAELSDGQIVNVIDTPGLFEVSAGSEFIGKEIVKCIDFAKDGIHAILVVLSVRSRFSEEEENALRSLQTLFGSKIVDYMIVVFTGGDELEDDEDTLDDYLGRECPESLKQILSLCGNRCVLFDNKTKDEKKRSGQVQQLLSFVNLIVLQNGGQPYTDELFAELKKGAMKLHREQRKVDSLEGYSEGQISELKKHMQQTYEEQLKHITEMIESKLKEATTRLEKQLAEEQAARLRAEDSAKLAQKKSDDEIRKLRKHLEKAH---EELRKRGDKGGCAIL 347          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: V4TTG1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020992mg PE=4 SV=1)

HSP 1 Score: 462.611 bits (1189), Expect = 9.269e-158
Identity = 246/340 (72.35%), Postives = 285/340 (83.82%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR--CAIL 1288
            MGG  ID D +  SPSNG + +VLVGRTGNGKSAT NSILGKK+F S+A SSGVT +CE+Q+T+LK GQ++NVIDTPGLFD SA  EF+ KEIVKCI +AKDGIHAVL+VFS+R RFS+EE AA+  L++LFG KI +YMIVVFTGGDELE+N+ETLEDYLGRECP+PLK+IL LC NR VLFDNKTKD  KR  QV  LL+LVN VI QN GQPYTDE+FAELKKGATKLRD Q  V +LKGYSKREISE KEQ+++SYE+QL R TEMVESKLKETT RLEQQLAEE  ARLKAE  AQLAQMKSN++I KLRE LER+++ET+ELR +A +  C IL
Sbjct:    1 MGGRVIDADSKPNSPSNGERNLVLVGRTGNGKSATANSILGKKAFMSKAGSSGVTKTCEMQRTMLKAGQVVNVIDTPGLFDSSADPEFVSKEIVKCIGMAKDGIHAVLLVFSIRNRFSKEEGAAIHILESLFGKKISDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDAAKRTEQVGKLLSLVNSVIAQNAGQPYTDEIFAELKKGATKLRDTQVEVDSLKGYSKREISELKEQMQKSYEDQLKRTTEMVESKLKETTTRLEQQLAEEHLARLKAEGAAQLAQMKSNEKIFKLREKLERSQRETQELRNRAPQPPCPIL 340          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: Q9ZRD1_TOBAC (NTGP4 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 462.225 bits (1188), Expect = 1.431e-157
Identity = 243/341 (71.26%), Postives = 296/341 (86.80%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR---CAIL 1288
            MGGSAI DDWEF +  NG +T+VLVGRTGNGKSATGNSILG+K+F+S +SS+GVTS+CELQ+TVL+DGQIL+VIDTPGLFDFSA  EFIG EIVKCI++AKDGIHAVLVV SVRTRFS+EE+AA++SL+  FG KI +YM++VFTGGD+LE+NEETLEDYLGR+CP+PLKDIL +CGNR VLFDNK+KD  K+  Q++ LL+LVN+V+E NGG+PYTD+LF ELKKGA KLR+Q   V  L GYSK+EI E KEQ+++SYEEQL RITE+VESKLK+TT RLE+QLA+EQAARL+AE  A+ AQ KS++EIRKLRE LERA++ETEELR ++A    C IL
Sbjct:    6 MGGSAISDDWEFAA--NGARTLVLVGRTGNGKSATGNSILGRKAFRSMSSSAGVTSTCELQRTVLEDGQILDVIDTPGLFDFSAEPEFIGNEIVKCINMAKDGIHAVLVVLSVRTRFSREEQAAVQSLREFFGGKISDYMVLVFTGGDDLEDNEETLEDYLGRDCPEPLKDILAMCGNRRVLFDNKSKDHLKKADQLKQLLSLVNVVVENNGGKPYTDDLFKELKKGAIKLRNQATEVNNLVGYSKQEILELKEQMQKSYEEQLRRITEVVESKLKDTTHRLEEQLAKEQAARLEAELSAKEAQKKSDNEIRKLREYLERAQRETEELRGRSADRGVCNIL 344          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: V7AGT1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G000400g PE=4 SV=1)

HSP 1 Score: 454.907 bits (1169), Expect = 9.046e-155
Identity = 242/341 (70.97%), Postives = 290/341 (85.04%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPS-NGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKG-YSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGG++IDDDWE TS S N ++TVVLVGRTGNGKSATGNSI+G++ F SRASSS V++SCELQ   L DGQ +NVIDTPGLFD S+GSEF+GKEIVKCIDLAKDGIHA++VVFS+RTRF++EEE ALRSLQ LFGSKIV+YMIVVFTGGDELEEN E++E+YLGRECP+ LK+IL LC NR+VLFDNKTKDE KR  QVQ LL+ VN+V+ +NGG+PYTDELF ELKKGA  L +QQ    +LKG YS+  I EF++Q+++ Y +QL RITEMVESKL E T+RL+QQL EEQAARLKAEE A LAQM+S++EIRKLRE+LE+A    EELR++A + CAIL
Sbjct:    1 MGGNSIDDDWELTSSSSNEVRTVVLVGRTGNGKSATGNSIIGRRVFLSRASSSAVSTSCELQTAELDDGQRVNVIDTPGLFDLSSGSEFVGKEIVKCIDLAKDGIHAIVVVFSIRTRFTEEEETALRSLQRLFGSKIVDYMIVVFTGGDELEENNESIEEYLGRECPKALKEILVLCENRVVLFDNKTKDEGKRSGQVQQLLSFVNIVLSRNGGRPYTDELFTELKKGAMNLHNQQRKFDSLKGHYSEGAILEFEKQMQQKYNDQLKRITEMVESKLSEATLRLKQQLDEEQAARLKAEEKAMLAQMRSDEEIRKLREHLEKAH---EELRQRAQSHCAIL 338          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: I3SDB7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 449.129 bits (1154), Expect = 1.414e-152
Identity = 236/339 (69.62%), Postives = 284/339 (83.78%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGG++ D+DWE TS +N ++TVV VGRTGNGKSATGNSILGKK FKSRASS GVTSSCE   T+  DGQ +NVIDTPGLFD SAGS+F+GKEIV CI+LAKDGIHA++VVFSVRTRFSQEE  ALRSLQTLFG KI +Y +VVFTGGDELEE ++TLEDYLG +CP+PLKD+L LC NR +LFDNKTKDE KR  QVQ L + VNMV+ QNGG+PYTD+LFAELKKGA KL +QQ  V +L+G+S +EI E+K+Q +++Y++QL RI EMVESKL++ T+RLEQQLA+EQAARLKAEE A LA+++S+ EIR+LR++LERA    EELRK    RC IL
Sbjct:    1 MGGNSFDEDWELTSSANEVRTVVSVGRTGNGKSATGNSILGKKVFKSRASSVGVTSSCE-SHTIELDGQTVNVIDTPGLFDISAGSDFVGKEIVNCINLAKDGIHAIIVVFSVRTRFSQEEATALRSLQTLFGDKIYDYTVVVFTGGDELEEEDQTLEDYLGCDCPEPLKDLLSLCENRRLLFDNKTKDERKRSEQVQQLFSFVNMVLSQNGGRPYTDDLFAELKKGALKLHNQQSQVNSLEGHSNKEILEYKKQAKQAYDDQLKRIAEMVESKLRDATLRLEQQLAKEQAARLKAEENANLARVRSDKEIRELRKHLERAH---EELRKHGENRCGIL 335          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: AIG1_ARATH (Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.421e-82
Identity = 162/334 (48.50%), Postives = 231/334 (69.16%), Query Frame = -1
Query:  275 IDDDWEFT-SPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1273
            +D   EF+ S  + ++ +VLVGRTGNGKSATGNSI+  K FKS+  SSGVT  C   K V  +G ILNVIDTPGLFD S  +EFIGKEIVKC+ LA  G+HAVL+V SVRTR SQEEE  L +LQ LFGSKIV+Y+IVVFTGGD LE++  TLEDYLG   P  LK +L LCG R++LFDNKTKD+ K+  QV +LL L+++V +QN   PYTDE++  +K+   + + +QE + + KG+S+ +++   ++++   E  L  + EM+E  +K   +  +++L E+   R KA+E++   +M+  ++++++ E   RAE E + L +Q  +C+IL
Sbjct:   28 VDHKDEFSASQPHPVENIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLILCGQRMILFDNKTKDDEKKTKQVHELLKLIDLVRKQNNNIPYTDEMYHMIKEENERHKKEQEELES-KGHSEEQLAALMKELQIMNERNLKAMAEMMEKNMK-IAMEAQEKLFEQ---REKAQEMSYQQKMEMQEKLKQM-EGRMRAEMEAQMLSRQ--QCSIL 353          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: P2A03_ARATH (Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana GN=PP2A3 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.713e-64
Identity = 144/327 (44.04%), Postives = 215/327 (65.75%), Query Frame = -1
Query:  281 SNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELK-KGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLE--QQLAEEQAARLKAE-ELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR--CA 1243
            S  IK +VLVGRTGNGKS+TGN++LG K FKS+  + GVT  CE+ +  ++DG I+NVIDTPGL D     + I  EI+ C+ +A++GIHAVL+V S R R S+EEE+ + +LQ +FGS+I++Y IVVFTGGD+LEE+++TL+DY    CP+ L  +L LCG R VLFDNK+KDE K+V QV+ LL  V  V EQ GG PYT +L  ++K +   +LR+++ V+ + K  ++ E++E ++ +    E+      +M E+K K+   + E  ++L E++ A+ +AE ELA +           + E L+  E++ ++L  QA R  CA
Sbjct:    2 SEPIKNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDYCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGRKVLFDNKSKDEKKKVEQVKQLLARVENVGEQTGGIPYTYQLHRKIKEENDERLREEERVIES-KNRAEAELAEMQQNLLMEKEK-----LQMEEAKNKQLIAQAEANEKLMEQERAKNRAETELAAV-----------MVEKLQMEEEKNKQLIAQANRMICA 311          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA4_HUMAN (GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.975e-36
Identity = 88/277 (31.77%), Postives = 160/277 (57.76%), Query Frame = -1
Query:  416 PSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQA 1246
            P N    +VLVG+TG GKSATGNSILG+K F S  ++  +T  CE + +  K+ +++ V+DTPG+FD    +    KEI++CI L   G HA+L+V  +  R+++EE  A   +  +FG +  ++MI++F    + +  +  L DYL RE P+ ++D++ + G+R    +NK     +   + Q LL L+  V+ +N    YT+ ++   ++      + Q+   A++   + E+   K +I   YEE++ ++ + VE + ++   ++E++LAE++A
Sbjct:   26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGERARSFMILIF--TRKDDLGDTNLHDYL-REAPEDIQDLMDIFGDRYCALNNKATGAEQEAQRAQ-LLGLIQRVVRENKEGCYTNRMYQRAEE------EIQKQTQAMQELHRVELEREKARIREEYEEKIRKLEDKVEQEKRKK--QMEKKLAEQEA 288          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA4_RAT (GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.989e-27
Identity = 70/200 (35.00%), Postives = 118/200 (59.00%), Query Frame = -1
Query:  626 VVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELF 1225
            +VL+G+TG GKS+TGNSILG+K+F S   +  +T  CE +   + DG+ L V+DTPG+FD         KEI +C+ L   G HA+L+V  +   ++ EE  A R L ++F  K   +MI++     + +  +  + +YL    P+ L++++    NR  LF+NK     ++  Q + LLTLV  ++ +NGG+ +T++++
Sbjct:   33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCE-KGVSIWDGKELVVVDTPGIFDTEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARRFMILLL--TRKDDLEDTDIHEYL-ETAPEVLQELIYEFRNRYCLFNNKASG-AEQEEQKRQLLTLVQSMVRENGGKYFTNKMY 226          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA7_HUMAN (GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.436e-27
Identity = 73/218 (33.49%), Postives = 130/218 (59.63%), Query Frame = -1
Query:  575 VVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTK-DETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVV 1225
            +VLVG+TG+GKSAT N+ILG++ F SR ++  VT +C+ + +    G+ L V+DTPGLFD     +   KEI +CI  +  G HA+++V  +  R+++EE+  +  ++ +FG   + +M+++FT  +ELE            +    LK I+  CGNR   F N  K  + ++ +QVQ+L+ L+  +++ N G  ++D+++   K    +L+ ++EV+
Sbjct:   11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQ-KASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHD---FIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIY---KDTEERLKQREEVL 220          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA1_MOUSE (GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 1.972e-26
Identity = 73/219 (33.33%), Postives = 123/219 (56.16%), Query Frame = -1
Query:  572 VVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGK-EIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVA 1225
            ++LVGRTG GKSATGNSILG+K F SR  +  VT SC L   +    Q+  V+DTP +F         G  E  +C  L+  G HA+L+V  +  RF+ ++  AL +++ LFG +++   +VVFT  ++L  +      +      + L+D++  CG R+   +N+    ++R  Q + LL +V  ++ ++GG  Y++E++  ++   T+  D Q+ VA
Sbjct:    6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQV-EVVDTPDIFSSEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMARTVVVFTRQEDLAGDSLQDYVHCTDN--RALRDLVAECGGRVCALNNRATG-SEREAQAEQLLGMVACLVREHGGAHYSNEVYELVQD--TRCADPQDQVA 217          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA1_HUMAN (GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.700e-25
Identity = 73/227 (32.16%), Postives = 128/227 (56.39%), Query Frame = -1
Query:  569 KTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIG-KEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELF--AELKKGAT---KLRDQQEVVAA 1231
            + ++LVGRTG GKSATGNSILG++ F SR  ++ VT +C        D   + V+DTP +F         G +E   C  L+  G HA+L+V  +  RF+ +++ A+R ++ +FG  ++ +M++VF    + +    +L DY+     + L++++  CG R+  FDN+     +   QV+ LL +V  ++ ++ G  Y++E++  A++ + A    +LR   E VAA
Sbjct:   28 RRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRW-DKCHVEVVDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMFGEDVLKWMVIVF--TRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDNRATGREQEA-QVEQLLGMVEGLVLEHKGAHYSNEVYELAQVLRWAGPEERLRRVAERVAA 249          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA8_HUMAN (GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.305e-24
Identity = 69/195 (35.38%), Postives = 119/195 (61.03%), Query Frame = -1
Query:  641 VVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPY 1225
            ++L+G+  +GKSATGN+ILGK  FKS+ S   V   C+ +  VL++ +++ VIDTP LF   A +E   + I  C++L+   +HA+L+V ++   F++E+E   + +Q +FG++   ++I+VFT  D+L ++          E  +PLK ++     R  +F+NKT  + +++TQV +LL  V  ++  NGG PY
Sbjct:   13 LLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARRHIIIVFTRKDDLGDDLLQDFI----EKNKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVLELLRKVESLVNTNGG-PY 200          

HSP 2 Score: 100.908 bits (250), Expect = 1.940e-21
Identity = 73/228 (32.02%), Postives = 125/228 (54.82%), Query Frame = -1
Query:  560 TVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPG---LFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNG--GQPYTDELFAELKKGATKLRDQQEVVAALKG 1228
             +VLVGR+G GKSATGNSILG   F SR  +  VT + +  +    DGQ + V+DTP    + D       + +E+ +C+   + G    ++VF +  RF++E++ A+  L+ +FG+    Y I++F    + +     LED++     + L+ I   CG R+  F+NK   + +  TQV+ LLT VN + +++G  G P+T E  ++L K   ++   ++++  L G
Sbjct:  440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFTKYAIMLF--TRKEDLGAGNLEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQAQE-TQVKALLTKVNDLRKESGWSGYPHTQENVSKLIKNVQEMSQAEKLLKNLIG 662          

HSP 3 Score: 70.4774 bits (171), Expect = 1.457e-11
Identity = 59/202 (29.21%), Postives = 103/202 (50.99%), Query Frame = -1
Query:  647 SPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNK-TKDETKRVTQVQDLLTLVNMVIEQNGGQ 1249
            +P     TV+LVG+ G GKSA GNSILG+++F++  S   VT S   +    +  ++ ++ID P +         + K I         G HA L+V  +   +++ +EA L ++Q  FG K   YMI++     + +  ++ L+ +L R   + L  ++  C NR   F+ + T +E +R  Q  +LL  +  ++ QNG +
Sbjct:  242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKKV-SIIDAPDISSLKNIDSEVRKHICT-------GPHAFLLVTPL-GFYTKNDEAVLSTIQNNFGEKFFEYMIILL--TRKEDLGDQDLDTFL-RNSNKALYGLIQKCKNRYSAFNYRATGEEEQR--QADELLEKIESMVHQNGNK 429          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA6_MOUSE (GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.740e-23
Identity = 77/201 (38.31%), Postives = 122/201 (60.70%), Query Frame = -1
Query:  629 VVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLK-DGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGL-CGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDEL 1225
            ++LVG+TG+GKSATGNSILG+++F+S+ S+  VT++   QK   + +G+ L VIDTP +F      E   K+I  C  LA  G HAVL+V  V  R++ E++A  R LQ +FG+ I+ Y I+VF    + +  E +LE+Y+     + L D+L + C  R   F+NK + + +   Q++ L+  V +++ +N G  YT E 
Sbjct:  106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTT--FQKGTREFEGKELEVIDTPDIFSPQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTILVF--TRKEDLAEGSLEEYIQENNNKSL-DVLDVACERRHCGFNNKAQGDEQEA-QLKKLMEEVELILWENEGHCYTMEF 297          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMA5_HUMAN (GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.497e-22
Identity = 76/270 (28.15%), Postives = 149/270 (55.19%), Query Frame = -1
Query:  476 DDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELF--AEL--KKGATKLR-DQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMV 1270
            +D+   T P+     ++LVG+TG GKSATGNSILG+  F+S+  +  VT +C++ KT   +G+ + V+DTP +F+  A ++ + K I  C  L+  G H +L+V  +  RF+ ++  A+R ++ +FG+  + +++++F    + +   + L+DY+       LKD++  C  R   F+N    E +R  Q  +LL ++  +  +  G  ++++LF  A+L  + GA   + D ++  A ++   ++   E +E       + L+R+  ++
Sbjct:   18 EDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIRKVKEVFGTGAMRHVVILF--THKEDLGGQALDDYVANTDNCSLKDLVRECERRYCAFNNWGSVEEQRQQQA-ELLAVIERLGREREGSFHSNDLFLDAQLLQRTGAGACQEDYRQYQAKVEWQVEKHKQELRENESNWAYKALLRVKHLM 279          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JN49_MEDTR6.521e-16072.00P-loop nucleoside triphosphate hydrolase superfami... [more]
V4TTG1_9ROSI9.269e-15872.35Uncharacterized protein OS=Citrus clementina GN=CI... [more]
Q9ZRD1_TOBAC1.431e-15771.26NTGP4 (Fragment) OS=Nicotiana tabacum PE=2 SV=1[more]
V7AGT1_PHAVU9.046e-15570.97Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
I3SDB7_LOTJA1.414e-15269.62Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
AIG1_ARATH9.421e-8248.50Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 ... [more]
P2A03_ARATH1.713e-6444.04Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabi... [more]
GIMA4_HUMAN3.975e-3631.77GTPase IMAP family member 4 OS=Homo sapiens GN=GIM... [more]
GIMA4_RAT1.989e-2735.00GTPase IMAP family member 4 OS=Rattus norvegicus G... [more]
GIMA7_HUMAN2.436e-2733.49GTPase IMAP family member 7 OS=Homo sapiens GN=GIM... [more]
GIMA1_MOUSE1.972e-2633.33GTPase IMAP family member 1 OS=Mus musculus GN=Gim... [more]
GIMA1_HUMAN8.700e-2532.16GTPase IMAP family member 1 OS=Homo sapiens GN=GIM... [more]
GIMA8_HUMAN2.305e-2435.38GTPase IMAP family member 8 OS=Homo sapiens GN=GIM... [more]
GIMA6_MOUSE1.740e-2338.31GTPase IMAP family member 6 OS=Mus musculus GN=Gim... [more]
GIMA5_HUMAN3.497e-2228.15GTPase IMAP family member 5 OS=Homo sapiens GN=GIM... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..303
NoneNo IPR availableCOILSCoilCoilcoord: 305..339
NoneNo IPR availablePANTHERPTHR10903GTPASE, IMAP FAMILY MEMBER-RELATEDcoord: 7..332
NoneNo IPR availablePANTHERPTHR10903:SF65AIG1 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 7..332
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 22..236
e-value: 1.8E-81
score: 272.4
IPR006703AIG1-type guanine nucleotide-binding (G) domainPROSITEPS51720G_AIG1coord: 18..226
score: 74.484
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..224
e-value: 8.2E-56
score: 188.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..277

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0013307 ID=g.arboreum_cottongen_reftransV1_0013307; Name=g.arboreum_cottongen_reftransV1_0013307; organism=Gossypium arboreum; type=contig; length=1375bp
GAAATTTTTAATCCTAGTTATCTTGTAGTTGAATCGACTCCCCATTTCTA
CATTTAATTTCATCAAGTAAGAAAGAGATATTTCACAACAATAAAACCAG
TGTTGAAATCTCTTATACACTTCAATATTTACAAAGAGGCATGAAGATAA
GACAGTTGAATTTGGAGAAGCGTAAAATCATTTACGCAGGATTTAAAAGC
ATTATAGCAATTTAAAAGATTGAAAATAAATATAATAGCATAAGAGAGAC
ATCTTCTCATTGTAGCGGCAATCACAGGATGGCACACCGAGCAGCTTGCT
TGCGGAGCTCCTCTGTCTCTTTCTCTGCTCTTTCTAGATTCTCTCGAAGC
TTCCGGATTTCATCATTTGATTTCATTTGAGCTAACTGTGCCAACTCTTC
CGCCTTCAGCCGTGCTGCCTGCTCCTCTGCTAACTGCTGCTCCAACCTGA
CAGTTGTCTCCTTCAGCTTTGACTCAACCATTTCAGTAATTCGCATAAGC
TGCTCTTCATATGATCTTTCAATCTGCTCCTTAAATTCGGATATTTCTCG
CTTGGAGTAGCCCTTTAGAGCAGCAACCACTTCTTGTTGATCACGAAGTT
TAGTTGCCCCTTTCTTCAGTTCCGCAAACAACTCATCAGTATATGGTTGC
CCACCATTCTGTTCTATGACCATGTTCACAAGTGTGAGAAGATCCTGAAC
TTGTGTCACTCTCTTGGTTTCATCCTTAGTCTTGTTGTCAAAAAGTACAA
GTCGGTTTCCACAAAGACCTAGAATGTCCTTTAATGGCTGTGGGCACTCG
CGGCCCAAATAATCTTCCAATGTTTCCTCGTTTTCTTCCAGTTCATCCCC
ACCAGTAAACACTACAATCATGTAGTTAACAATTTTGCTACCAAATAAAG
TCTGCAAACTACGCAATGCAGCTTCCTCTTCTTGTGAAAAGCGGGTCCTA
ACTGAGAAAACAACAAGAACTGCATGGATTCCATCCTTGGCAAGATCAAT
ACATTTGACAATTTCTTTTCCAATGAATTCAGATCCAGCTGAGAAATCAA
ACAACCCAGGAGTATCAATGACATTTAAAATTTGCCCATCTTTAAGCACT
GTTTTCTGCAATTCACAAGAACTAGTAACCCCAGATGAGCTAGCCCTTGA
TTTGAAGGATTTTTTTCCAAGAATGCTATTGCCAGTTGCACTTTTCCCAT
TGCCGGTACGTCCAACTAGAACCACAGTCTTAATACCATTGGAAGGTGAG
GTGAACTCCCAATCATCATCTATTGCACTTCCACCCATCATATACTATTA
CAATGTAAAAAATAAGCAGAAAGAATCTGGAAAGTTTTGTGTTTCAATCC
GAAAGTAAAGCAGGAAGAAGAGAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006703G_AIG1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding