g.arboreum_cottongen_reftransV1_0013307, g.arboreum_cottongen_reftransV1_0013307 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0013307
Unique Nameg.arboreum_cottongen_reftransV1_0013307
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1375
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr6chromosomeg.arboreum_cottongen_reftransV1_0013307:1..1375 .
Chr6:54404039..54409105 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0B0MT62_GOSAR (Protein AIG1-like protein OS=Gossypium arboreum GN=F383_25924 PE=4 SV=1)

HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = -1
Query:  275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291
            MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL
Sbjct:    1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 339          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0D2W5Q1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G135100 PE=4 SV=1)

HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0
Identity = 336/339 (99.12%), Postives = 338/339 (99.71%), Query Frame = -1
Query:  275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291
            MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTS+CELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRV QVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERA+KETEELRKQAARCAIL
Sbjct:    1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSTCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVKQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAQKETEELRKQAARCAIL 339          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A061FL24_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_036539 PE=4 SV=1)

HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0
Identity = 303/339 (89.38%), Postives = 324/339 (95.58%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGGSAIDDDWEFTSPSNG++TVVLVGRTGNGKSATGNSILG+KSFKSRASSSGVTS+CEL+ T +KDGQI+NVIDTPGLFD SAGSEF+GKEIVKCIDLAKDGIHAVLVVFSVRTRFS+EEEAALRSLQTLFGS+IV+YMIVVFTGGDELE+NEETLEDYLGRECPQPLKDIL LCGNRLVLFDNKTKDETKR  QVQDLL+LVNMVI QNGGQPY+DELFAELKKGATKLRDQQ+ VA+L+GYSKREIS+ KEQIERSYEEQL RIT MVESKLKETT RLEQQLAEEQAARLKAEE AQ AQMKSNDEIRKLRENLERA++ETEELRKQA +RCAIL
Sbjct:    1 MGGSAIDDDWEFTSPSNGVRTVVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCELRTTTIKDGQIVNVIDTPGLFDISAGSEFLGKEIVKCIDLAKDGIHAVLVVFSVRTRFSKEEEAALRSLQTLFGSRIVDYMIVVFTGGDELEDNEETLEDYLGRECPQPLKDILVLCGNRLVLFDNKTKDETKRAKQVQDLLSLVNMVIAQNGGQPYSDELFAELKKGATKLRDQQQEVASLEGYSKREISDLKEQIERSYEEQLRRITLMVESKLKETTTRLEQQLAEEQAARLKAEEQAQAAQMKSNDEIRKLRENLERAQRETEELRKQAESRCAIL 339          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0D2U0T1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G135100 PE=4 SV=1)

HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0
Identity = 310/339 (91.45%), Postives = 312/339 (92.04%), Query Frame = -1
Query:  275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291
            MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTS+CELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRV QVQDLLTLVNMVIEQNGGQPYTDELFAELK                          FKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERA+KETEELRKQAARCAIL
Sbjct:    1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSTCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVKQVQDLLTLVNMVIEQNGGQPYTDELFAELK--------------------------FKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAQKETEELRKQAARCAIL 313          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A067KKF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07992 PE=4 SV=1)

HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0
Identity = 284/339 (83.78%), Postives = 316/339 (93.22%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGGSA+DDDWE TSPSNG++TVVLVGRTGNGKSATGNSILG+K+FKSRASSSGVTS+CELQ+TV+ DGQI+NVIDTPGLFDFSA S+F+GKEIVKCI++AKDGIHAVLVVFSVRTRFSQEEE+ALRSLQTLFGSKI +YMIVVFTGGDELE+N+ETL+DYLGRECPQPLK+IL LC NRLVLFDNKTKDE KR  QVQ LL LVNMV+ QNGGQPYTDE+F ELKKGA KLRDQQE V +L+GY+KREI E KEQ+ +SYEEQL RITEMVESKL+ETT RLEQQLAEEQAARLKAEE+AQLAQMKSNDEIR+LRENLERA+KETEELR+QA +RC IL
Sbjct:    1 MGGSALDDDWELTSPSNGVRTVVLVGRTGNGKSATGNSILGRKAFKSRASSSGVTSTCELQRTVMSDGQIINVIDTPGLFDFSAESDFVGKEIVKCINMAKDGIHAVLVVFSVRTRFSQEEESALRSLQTLFGSKIFDYMIVVFTGGDELEDNDETLQDYLGRECPQPLKEILNLCKNRLVLFDNKTKDELKRAEQVQQLLFLVNMVMAQNGGQPYTDEIFVELKKGAMKLRDQQEEVDSLEGYTKREILELKEQMHKSYEEQLKRITEMVESKLRETTNRLEQQLAEEQAARLKAEEIAQLAQMKSNDEIRRLRENLERAQKETEELRRQAESRCNIL 339          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: V4TN07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021509mg PE=4 SV=1)

HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0
Identity = 286/341 (83.87%), Postives = 314/341 (92.08%), Query Frame = -1
Query:  275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR--CAIL 1291
            MMGGSAIDDDWE TSPSNG +TVVLVGRTGNGKSATGNSILG+++FKSRASSSGVTS+CE+Q+TVLKDGQ++NVIDTPGLFDFSAGSEF+GKEIVKCI +AKDGIHAVLVVFSVR+RFSQEEEAAL SLQTLFG KI +YMIVVFTGGDELE+N+ETLEDYLGRECP+PLK+IL LC NR VLFDNKTKDE KR  QV  LL+LVN V  QNGGQPYTD++FAELKKGATKLRDQQ  V +LKGYSKREISE KEQ+ +SYE+QL RITEMVESKLKETT RLEQQLAEEQAARLKAEE+AQLAQMKSNDEIRKLRENLERA++ETEELRKQA +  CAIL
Sbjct:    1 MMGGSAIDDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDEAKRTEQVWKLLSLVNSVAVQNGGQPYTDDIFAELKKGATKLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQAEKGGCAIL 341          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: B9R8X8_RICCO (Aig1, putative OS=Ricinus communis GN=RCOM_1602690 PE=4 SV=1)

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 281/339 (82.89%), Postives = 311/339 (91.74%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGGSAIDDDWE TSPSNG++TVVLVGRTGNGKSATGNS+LG+K+FKSRASSSGVTS+CELQ+TV+ DGQ++NV+DTPGLFDFSA SEF+GKEIVKCI++AKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKI +YMIVVFTGGDELE+N+ETLEDYLGRECPQPL++IL LC NRLVLFDNKTKDE KR  QV  LL+LVN+VI +NGGQPYTDELF ELK  A KLRDQQE V +LKGYSK EI E KEQ+ RSYEEQL RITEMVE KL+ETT RLEQQLAEEQAARLKAEE AQLAQMKSNDEIR+LRENLERA+KET+ELR+QA +RC IL
Sbjct:    1 MGGSAIDDDWELTSPSNGVRTVVLVGRTGNGKSATGNSLLGRKAFKSRASSSGVTSTCELQQTVITDGQVINVVDTPGLFDFSAESEFVGKEIVKCINMAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIFDYMIVVFTGGDELEDNDETLEDYLGRECPQPLQEILTLCKNRLVLFDNKTKDEFKRAEQVHQLLSLVNLVIAENGGQPYTDELFVELKARAIKLRDQQEEVDSLKGYSKGEILELKEQMHRSYEEQLKRITEMVELKLRETTNRLEQQLAEEQAARLKAEEKAQLAQMKSNDEIRQLRENLERAQKETQELRRQAESRCNIL 339          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: D7U934_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01860 PE=4 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0
Identity = 273/340 (80.29%), Postives = 311/340 (91.47%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA--ARCAIL 1288
            MGGS+IDD+WEFT+PS+G++T+VLVGRTGNGKSATGNSILG+KSFKSRASSSGVTS+CELQ+T+L+DGQI+NVIDTPGLFD SA S+F+GKEIVKCIDLAKDG+HAVLVVFSVRTRFS+EEEAAL SLQTLFGSKI++YMIVVFTGGDELE+N+ETLEDYLGRECP+PLK  L LC NRLVLFDNKTKDE K+  QVQ LL+LVN VI QNGGQPYTDELF ELKKGA KLRDQ E V +L+GYSKREI   KEQ+ +SYEEQL RITEMVE KL+ETT++LE+QLAEEQAARLKAEE+AQ AQ+ SNDEIRKLRENLERA++ETEELRK+A   +CAIL
Sbjct:    6 MGGSSIDDEWEFTAPSSGVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCELQRTILRDGQIVNVIDTPGLFDLSAESDFVGKEIVKCIDLAKDGVHAVLVVFSVRTRFSKEEEAALHSLQTLFGSKIIDYMIVVFTGGDELEDNDETLEDYLGRECPEPLKQTLLLCQNRLVLFDNKTKDEAKKYEQVQKLLSLVNSVILQNGGQPYTDELFMELKKGAQKLRDQTEEVDSLEGYSKREILVLKEQMHKSYEEQLKRITEMVEVKLRETTMKLERQLAEEQAARLKAEEIAQRAQLASNDEIRKLRENLERAQRETEELRKRAESGKCAIL 345          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: M5XWZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008340mg PE=4 SV=1)

HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0
Identity = 270/339 (79.65%), Postives = 310/339 (91.45%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288
            MGGS+IDDDWE  S S+ ++TVVLVGRTGNGKSATGNSILG+K+FKS+ SSSGVTS+CEL+K VL+DGQ++NVIDTPGLFDFSA S+F+GKEIVKCIDLAKDGIHAVLV FSVRTRFSQEEEAALRSLQTLFGSKI++YMIVVFTGGD+LEEN+ETLEDYLGRECP+PLK+IL LC NR VLFDNKTKDE+KRV QVQ LL+LVN VI QNGG+PYTDE+FAE+K+GA KLRDQQE V +LKGYSKREIS+ K Q++R+YEEQL RITEMVESKL+ETT+RLEQQLA+EQAARL+AEE AQ+AQM+S+DEIRKLRENL RAE   EELRK+   +CAIL
Sbjct:    1 MGGSSIDDDWELPSLSSAVRTVVLVGRTGNGKSATGNSILGRKAFKSKTSSSGVTSTCELEKAVLRDGQVVNVIDTPGLFDFSARSDFVGKEIVKCIDLAKDGIHAVLVTFSVRTRFSQEEEAALRSLQTLFGSKIIDYMIVVFTGGDDLEENDETLEDYLGRECPEPLKEILVLCENRCVLFDNKTKDESKRVQQVQHLLSLVNKVIAQNGGRPYTDEIFAEVKRGAIKLRDQQEEVNSLKGYSKREISDLKNQMQRAYEEQLTRITEMVESKLRETTIRLEQQLADEQAARLRAEENAQMAQMRSDDEIRKLRENLMRAE---EELRKRGEGKCAIL 336          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: W9S404_9ROSA (Protein AIG1 OS=Morus notabilis GN=L484_011636 PE=4 SV=1)

HSP 1 Score: 509.605 bits (1311), Expect = 3.777e-176
Identity = 266/341 (78.01%), Postives = 306/341 (89.74%), Query Frame = -1
Query:  275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVV--AALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAA-RCAIL 1288
            MGG++I+DDWE TSPSNG++TVVLVGRTGNGKSATGNSILG+K+FKSRASSSGVTS+CELQ+TVL+D  I+NVIDTPGLFDFSAGSEF+GKEIVKCI+LAKDGIHAVLVVFSVRTRFSQEE+AAL SLQTLFGSKI +YMI VFTGGDELE+N+E+LEDYLGRECP+PLKDI+ LC NRLVLFDNKTKDE+K+  QVQ LL+LVN V  QNGGQPYTDE+FAE+K+GA +LRDQQE V   +L+ Y+KREISE KE + +SY+EQL RITEMVESKL+ETT RLEQQLAEEQAARLKAEE AQ AQ +S++EIRKLRE+LE+A    EELRK+   RCAIL
Sbjct:    1 MGGNSIEDDWELTSPSNGVRTVVLVGRTGNGKSATGNSILGRKAFKSRASSSGVTSTCELQRTVLRDDHIINVIDTPGLFDFSAGSEFVGKEIVKCINLAKDGIHAVLVVFSVRTRFSQEEQAALHSLQTLFGSKIFDYMIAVFTGGDELEDNDESLEDYLGRECPEPLKDIITLCENRLVLFDNKTKDESKKFYQVQQLLSLVNKVTAQNGGQPYTDEIFAEVKQGAMRLRDQQEEVDSLSLEKYTKREISEMKELMHKSYDEQLKRITEMVESKLRETTSRLEQQLAEEQAARLKAEENAQKAQFRSDEEIRKLREHLEQAH---EELRKRGENRCAIL 338          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_MOUSE (GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.974e-10
Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = -1
Query:  731 TSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQI----------LNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIH-AVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNK 1252
            T  +  I  + + GRT +GKS+ GN +LG   F S  +   VT  C L ++    G +          + V+DTPG       +  + +E+ K +     ++G+H A+LV  +    F QE   A++ +Q L G    NYM V+FT  +ELEE   + E+YL RE    L  +L    +R +    +
Sbjct:    2 TDTNKMIINLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQLMQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTLLTLLDSVQHRYIFLSGR 187          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_RAT (GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 2.808e-9
Identity = 38/139 (27.34%), Postives = 67/139 (48.20%), Query Frame = -1
Query:  857 IKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQI----------LNVIDTPGLFDFSAGSEFIGKEIVKCID--LAKDGIHAVLVVFSVRTR-FSQEEEAALRSLQTLFGSKIVNYMIVVF 1234
            I  + ++G+T +GKS+ GN +LG   F SR +   VT  C L ++    G +          + V+DTPG       +  + +E+ K ++    ++G+H  L+V       F QE   +++ +Q L G    NY  ++F
Sbjct:    7 IINLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQLIQELLGDSWKNYTAILF 145          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_HUMAN (GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.086e-9
Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = -1
Query:  857 TSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTV-----LKDGQI-----LNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIHAVLVVFSVRTRFS-QEEEAALRSLQTLFGSKIVNYMIVVF 1252
            T P+  I  + L G T +GKS+ GN +LG   F S  +   VT+ C L ++      ++ G +     + V+DTPG        +++ +E+ + +     + G+H  L+V      F  QE    ++ +Q L G   +NY  ++F
Sbjct:    2 TDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQELLGHAWMNYTAILF 146          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=3 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.577e-8
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = -1
Query: 1055 FTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPG 1255
             TS S+ I+T+ LVG TG+G++AT N+I GKK  +S   ++ VT  C+  K    D  I N+IDTPG
Sbjct:  874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPINNMIDTPG 940          
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_BOVIN (GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.210e-8
Identity = 48/175 (27.43%), Postives = 84/175 (48.00%), Query Frame = -1
Query:  743 TVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKT------VLKDGQ----ILNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIHAVLVVFSVRTRFS-QEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVL 1228
             + L G T +GKS+ GN ILG   F S  +   VT  C L ++      + + GQ     + V+DTPG        + + +E+ + +     ++G+H  L+V         QEE + ++ +Q L G   +NY  ++FT  +++EE     ++YL RE  + L  +L    +R + 
Sbjct:    9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQVQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQMIQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLKLLNSIQHRYIF 182          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0MT62_GOSAR0.000e+0100.00Protein AIG1-like protein OS=Gossypium arboreum GN... [more]
A0A0D2W5Q1_GOSRA0.000e+099.12Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061FL24_THECC0.000e+089.38P-loop containing nucleoside triphosphate hydrolas... [more]
A0A0D2U0T1_GOSRA0.000e+091.45Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A067KKF5_JATCU0.000e+083.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4TN07_9ROSI0.000e+083.87Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9R8X8_RICCO0.000e+082.89Aig1, putative OS=Ricinus communis GN=RCOM_1602690... [more]
D7U934_VITVI0.000e+080.29Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XWZ9_PRUPE0.000e+079.65Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
W9S404_9ROSA3.777e-17678.01Protein AIG1 OS=Morus notabilis GN=L484_011636 PE=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
GIMD1_MOUSE4.974e-1029.95GTPase IMAP family member GIMD1 OS=Mus musculus GN... [more]
GIMD1_RAT2.808e-927.34GTPase IMAP family member GIMD1 OS=Rattus norvegic... [more]
GIMD1_HUMAN5.086e-926.90GTPase IMAP family member GIMD1 OS=Homo sapiens GN... [more]
DRL38_ARATH1.577e-846.27Probable disease resistance protein At5g47260 OS=A... [more]
GIMD1_BOVIN7.210e-827.43GTPase IMAP family member GIMD1 OS=Bos taurus GN=G... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 273..303
NoneNo IPR availableCOILSCoilCoilcoord: 305..339
NoneNo IPR availablePANTHERPTHR10903GTPASE, IMAP FAMILY MEMBER-RELATEDcoord: 7..332
NoneNo IPR availablePANTHERPTHR10903:SF65AIG1 DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 7..332
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 22..236
e-value: 1.8E-81
score: 272.4
IPR006703AIG1-type guanine nucleotide-binding (G) domainPROSITEPS51720G_AIG1coord: 18..226
score: 74.484
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..224
e-value: 8.2E-56
score: 188.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..277

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0013307 ID=g.arboreum_cottongen_reftransV1_0013307; Name=g.arboreum_cottongen_reftransV1_0013307; organism=Gossypium arboreum; type=contig; length=1375bp
GAAATTTTTAATCCTAGTTATCTTGTAGTTGAATCGACTCCCCATTTCTA
CATTTAATTTCATCAAGTAAGAAAGAGATATTTCACAACAATAAAACCAG
TGTTGAAATCTCTTATACACTTCAATATTTACAAAGAGGCATGAAGATAA
GACAGTTGAATTTGGAGAAGCGTAAAATCATTTACGCAGGATTTAAAAGC
ATTATAGCAATTTAAAAGATTGAAAATAAATATAATAGCATAAGAGAGAC
ATCTTCTCATTGTAGCGGCAATCACAGGATGGCACACCGAGCAGCTTGCT
TGCGGAGCTCCTCTGTCTCTTTCTCTGCTCTTTCTAGATTCTCTCGAAGC
TTCCGGATTTCATCATTTGATTTCATTTGAGCTAACTGTGCCAACTCTTC
CGCCTTCAGCCGTGCTGCCTGCTCCTCTGCTAACTGCTGCTCCAACCTGA
CAGTTGTCTCCTTCAGCTTTGACTCAACCATTTCAGTAATTCGCATAAGC
TGCTCTTCATATGATCTTTCAATCTGCTCCTTAAATTCGGATATTTCTCG
CTTGGAGTAGCCCTTTAGAGCAGCAACCACTTCTTGTTGATCACGAAGTT
TAGTTGCCCCTTTCTTCAGTTCCGCAAACAACTCATCAGTATATGGTTGC
CCACCATTCTGTTCTATGACCATGTTCACAAGTGTGAGAAGATCCTGAAC
TTGTGTCACTCTCTTGGTTTCATCCTTAGTCTTGTTGTCAAAAAGTACAA
GTCGGTTTCCACAAAGACCTAGAATGTCCTTTAATGGCTGTGGGCACTCG
CGGCCCAAATAATCTTCCAATGTTTCCTCGTTTTCTTCCAGTTCATCCCC
ACCAGTAAACACTACAATCATGTAGTTAACAATTTTGCTACCAAATAAAG
TCTGCAAACTACGCAATGCAGCTTCCTCTTCTTGTGAAAAGCGGGTCCTA
ACTGAGAAAACAACAAGAACTGCATGGATTCCATCCTTGGCAAGATCAAT
ACATTTGACAATTTCTTTTCCAATGAATTCAGATCCAGCTGAGAAATCAA
ACAACCCAGGAGTATCAATGACATTTAAAATTTGCCCATCTTTAAGCACT
GTTTTCTGCAATTCACAAGAACTAGTAACCCCAGATGAGCTAGCCCTTGA
TTTGAAGGATTTTTTTCCAAGAATGCTATTGCCAGTTGCACTTTTCCCAT
TGCCGGTACGTCCAACTAGAACCACAGTCTTAATACCATTGGAAGGTGAG
GTGAACTCCCAATCATCATCTATTGCACTTCCACCCATCATATACTATTA
CAATGTAAAAAATAAGCAGAAAGAATCTGGAAAGTTTTGTGTTTCAATCC
GAAAGTAAAGCAGGAAGAAGAGAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006703G_AIG1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding