g.arboreum_cottongen_reftransV1_0013307, g.arboreum_cottongen_reftransV1_0013307 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0B0MT62_GOSAR (Protein AIG1-like protein OS=Gossypium arboreum GN=F383_25924 PE=4 SV=1) HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = -1 Query: 275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL Sbjct: 1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 339
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0D2W5Q1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G135100 PE=4 SV=1) HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0 Identity = 336/339 (99.12%), Postives = 338/339 (99.71%), Query Frame = -1 Query: 275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTS+CELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRV QVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERA+KETEELRKQAARCAIL Sbjct: 1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSTCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVKQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAQKETEELRKQAARCAIL 339
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A061FL24_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_036539 PE=4 SV=1) HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0 Identity = 303/339 (89.38%), Postives = 324/339 (95.58%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288 MGGSAIDDDWEFTSPSNG++TVVLVGRTGNGKSATGNSILG+KSFKSRASSSGVTS+CEL+ T +KDGQI+NVIDTPGLFD SAGSEF+GKEIVKCIDLAKDGIHAVLVVFSVRTRFS+EEEAALRSLQTLFGS+IV+YMIVVFTGGDELE+NEETLEDYLGRECPQPLKDIL LCGNRLVLFDNKTKDETKR QVQDLL+LVNMVI QNGGQPY+DELFAELKKGATKLRDQQ+ VA+L+GYSKREIS+ KEQIERSYEEQL RIT MVESKLKETT RLEQQLAEEQAARLKAEE AQ AQMKSNDEIRKLRENLERA++ETEELRKQA +RCAIL Sbjct: 1 MGGSAIDDDWEFTSPSNGVRTVVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCELRTTTIKDGQIVNVIDTPGLFDISAGSEFLGKEIVKCIDLAKDGIHAVLVVFSVRTRFSKEEEAALRSLQTLFGSRIVDYMIVVFTGGDELEDNEETLEDYLGRECPQPLKDILVLCGNRLVLFDNKTKDETKRAKQVQDLLSLVNMVIAQNGGQPYSDELFAELKKGATKLRDQQQEVASLEGYSKREISDLKEQIERSYEEQLRRITLMVESKLKETTTRLEQQLAEEQAARLKAEEQAQAAQMKSNDEIRKLRENLERAQRETEELRKQAESRCAIL 339
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A0D2U0T1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G135100 PE=4 SV=1) HSP 1 Score: 580.482 bits (1495), Expect = 0.000e+0 Identity = 310/339 (91.45%), Postives = 312/339 (92.04%), Query Frame = -1 Query: 275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAARCAIL 1291 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTS+CELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRV QVQDLLTLVNMVIEQNGGQPYTDELFAELK FKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERA+KETEELRKQAARCAIL Sbjct: 1 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSTCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFTGGDELEENEETLEDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVKQVQDLLTLVNMVIEQNGGQPYTDELFAELK--------------------------FKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAQKETEELRKQAARCAIL 313
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: A0A067KKF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07992 PE=4 SV=1) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 284/339 (83.78%), Postives = 316/339 (93.22%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288 MGGSA+DDDWE TSPSNG++TVVLVGRTGNGKSATGNSILG+K+FKSRASSSGVTS+CELQ+TV+ DGQI+NVIDTPGLFDFSA S+F+GKEIVKCI++AKDGIHAVLVVFSVRTRFSQEEE+ALRSLQTLFGSKI +YMIVVFTGGDELE+N+ETL+DYLGRECPQPLK+IL LC NRLVLFDNKTKDE KR QVQ LL LVNMV+ QNGGQPYTDE+F ELKKGA KLRDQQE V +L+GY+KREI E KEQ+ +SYEEQL RITEMVESKL+ETT RLEQQLAEEQAARLKAEE+AQLAQMKSNDEIR+LRENLERA+KETEELR+QA +RC IL Sbjct: 1 MGGSALDDDWELTSPSNGVRTVVLVGRTGNGKSATGNSILGRKAFKSRASSSGVTSTCELQRTVMSDGQIINVIDTPGLFDFSAESDFVGKEIVKCINMAKDGIHAVLVVFSVRTRFSQEEESALRSLQTLFGSKIFDYMIVVFTGGDELEDNDETLQDYLGRECPQPLKEILNLCKNRLVLFDNKTKDELKRAEQVQQLLFLVNMVMAQNGGQPYTDEIFVELKKGAMKLRDQQEEVDSLEGYTKREILELKEQMHKSYEEQLKRITEMVESKLRETTNRLEQQLAEEQAARLKAEEIAQLAQMKSNDEIRRLRENLERAQKETEELRRQAESRCNIL 339
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: V4TN07_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021509mg PE=4 SV=1) HSP 1 Score: 551.592 bits (1420), Expect = 0.000e+0 Identity = 286/341 (83.87%), Postives = 314/341 (92.08%), Query Frame = -1 Query: 275 MMGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAAR--CAIL 1291 MMGGSAIDDDWE TSPSNG +TVVLVGRTGNGKSATGNSILG+++FKSRASSSGVTS+CE+Q+TVLKDGQ++NVIDTPGLFDFSAGSEF+GKEIVKCI +AKDGIHAVLVVFSVR+RFSQEEEAAL SLQTLFG KI +YMIVVFTGGDELE+N+ETLEDYLGRECP+PLK+IL LC NR VLFDNKTKDE KR QV LL+LVN V QNGGQPYTD++FAELKKGATKLRDQQ V +LKGYSKREISE KEQ+ +SYE+QL RITEMVESKLKETT RLEQQLAEEQAARLKAEE+AQLAQMKSNDEIRKLRENLERA++ETEELRKQA + CAIL Sbjct: 1 MMGGSAIDDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKEILQLCDNRCVLFDNKTKDEAKRTEQVWKLLSLVNSVAVQNGGQPYTDDIFAELKKGATKLRDQQFEVDSLKGYSKREISELKEQMHKSYEDQLKRITEMVESKLKETTTRLEQQLAEEQAARLKAEEVAQLAQMKSNDEIRKLRENLERAQRETEELRKQAEKGGCAIL 341
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: B9R8X8_RICCO (Aig1, putative OS=Ricinus communis GN=RCOM_1602690 PE=4 SV=1) HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0 Identity = 281/339 (82.89%), Postives = 311/339 (91.74%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288 MGGSAIDDDWE TSPSNG++TVVLVGRTGNGKSATGNS+LG+K+FKSRASSSGVTS+CELQ+TV+ DGQ++NV+DTPGLFDFSA SEF+GKEIVKCI++AKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKI +YMIVVFTGGDELE+N+ETLEDYLGRECPQPL++IL LC NRLVLFDNKTKDE KR QV LL+LVN+VI +NGGQPYTDELF ELK A KLRDQQE V +LKGYSK EI E KEQ+ RSYEEQL RITEMVE KL+ETT RLEQQLAEEQAARLKAEE AQLAQMKSNDEIR+LRENLERA+KET+ELR+QA +RC IL Sbjct: 1 MGGSAIDDDWELTSPSNGVRTVVLVGRTGNGKSATGNSLLGRKAFKSRASSSGVTSTCELQQTVITDGQVINVVDTPGLFDFSAESEFVGKEIVKCINMAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIFDYMIVVFTGGDELEDNDETLEDYLGRECPQPLQEILTLCKNRLVLFDNKTKDEFKRAEQVHQLLSLVNLVIAENGGQPYTDELFVELKARAIKLRDQQEEVDSLKGYSKGEILELKEQMHRSYEEQLKRITEMVELKLRETTNRLEQQLAEEQAARLKAEEKAQLAQMKSNDEIRQLRENLERAQKETQELRRQAESRCNIL 339
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: D7U934_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01860 PE=4 SV=1) HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0 Identity = 273/340 (80.29%), Postives = 311/340 (91.47%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA--ARCAIL 1288 MGGS+IDD+WEFT+PS+G++T+VLVGRTGNGKSATGNSILG+KSFKSRASSSGVTS+CELQ+T+L+DGQI+NVIDTPGLFD SA S+F+GKEIVKCIDLAKDG+HAVLVVFSVRTRFS+EEEAAL SLQTLFGSKI++YMIVVFTGGDELE+N+ETLEDYLGRECP+PLK L LC NRLVLFDNKTKDE K+ QVQ LL+LVN VI QNGGQPYTDELF ELKKGA KLRDQ E V +L+GYSKREI KEQ+ +SYEEQL RITEMVE KL+ETT++LE+QLAEEQAARLKAEE+AQ AQ+ SNDEIRKLRENLERA++ETEELRK+A +CAIL Sbjct: 6 MGGSSIDDEWEFTAPSSGVRTLVLVGRTGNGKSATGNSILGRKSFKSRASSSGVTSTCELQRTILRDGQIVNVIDTPGLFDLSAESDFVGKEIVKCIDLAKDGVHAVLVVFSVRTRFSKEEEAALHSLQTLFGSKIIDYMIVVFTGGDELEDNDETLEDYLGRECPEPLKQTLLLCQNRLVLFDNKTKDEAKKYEQVQKLLSLVNSVILQNGGQPYTDELFMELKKGAQKLRDQTEEVDSLEGYSKREILVLKEQMHKSYEEQLKRITEMVEVKLRETTMKLERQLAEEQAARLKAEEIAQRAQLASNDEIRKLRENLERAQRETEELRKRAESGKCAIL 345
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: M5XWZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008340mg PE=4 SV=1) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 270/339 (79.65%), Postives = 310/339 (91.45%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVVAALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQA-ARCAIL 1288 MGGS+IDDDWE S S+ ++TVVLVGRTGNGKSATGNSILG+K+FKS+ SSSGVTS+CEL+K VL+DGQ++NVIDTPGLFDFSA S+F+GKEIVKCIDLAKDGIHAVLV FSVRTRFSQEEEAALRSLQTLFGSKI++YMIVVFTGGD+LEEN+ETLEDYLGRECP+PLK+IL LC NR VLFDNKTKDE+KRV QVQ LL+LVN VI QNGG+PYTDE+FAE+K+GA KLRDQQE V +LKGYSKREIS+ K Q++R+YEEQL RITEMVESKL+ETT+RLEQQLA+EQAARL+AEE AQ+AQM+S+DEIRKLRENL RAE EELRK+ +CAIL Sbjct: 1 MGGSSIDDDWELPSLSSAVRTVVLVGRTGNGKSATGNSILGRKAFKSKTSSSGVTSTCELEKAVLRDGQVVNVIDTPGLFDFSARSDFVGKEIVKCIDLAKDGIHAVLVTFSVRTRFSQEEEAALRSLQTLFGSKIIDYMIVVFTGGDDLEENDETLEDYLGRECPEPLKEILVLCENRCVLFDNKTKDESKRVQQVQHLLSLVNKVIAQNGGRPYTDEIFAEVKRGAIKLRDQQEEVNSLKGYSKREISDLKNQMQRAYEEQLTRITEMVESKLRETTIRLEQQLADEQAARLRAEENAQMAQMRSDDEIRKLRENLMRAE---EELRKRGEGKCAIL 336
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Match: W9S404_9ROSA (Protein AIG1 OS=Morus notabilis GN=L484_011636 PE=4 SV=1) HSP 1 Score: 509.605 bits (1311), Expect = 3.777e-176 Identity = 266/341 (78.01%), Postives = 306/341 (89.74%), Query Frame = -1 Query: 275 MGGSAIDDDWEFTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPGLFDFSAGSEFIGKEIVKCIDLAKDGIHAVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNKTKDETKRVTQVQDLLTLVNMVIEQNGGQPYTDELFAELKKGATKLRDQQEVV--AALKGYSKREISEFKEQIERSYEEQLMRITEMVESKLKETTVRLEQQLAEEQAARLKAEELAQLAQMKSNDEIRKLRENLERAEKETEELRKQAA-RCAIL 1288 MGG++I+DDWE TSPSNG++TVVLVGRTGNGKSATGNSILG+K+FKSRASSSGVTS+CELQ+TVL+D I+NVIDTPGLFDFSAGSEF+GKEIVKCI+LAKDGIHAVLVVFSVRTRFSQEE+AAL SLQTLFGSKI +YMI VFTGGDELE+N+E+LEDYLGRECP+PLKDI+ LC NRLVLFDNKTKDE+K+ QVQ LL+LVN V QNGGQPYTDE+FAE+K+GA +LRDQQE V +L+ Y+KREISE KE + +SY+EQL RITEMVESKL+ETT RLEQQLAEEQAARLKAEE AQ AQ +S++EIRKLRE+LE+A EELRK+ RCAIL Sbjct: 1 MGGNSIEDDWELTSPSNGVRTVVLVGRTGNGKSATGNSILGRKAFKSRASSSGVTSTCELQRTVLRDDHIINVIDTPGLFDFSAGSEFVGKEIVKCINLAKDGIHAVLVVFSVRTRFSQEEQAALHSLQTLFGSKIFDYMIAVFTGGDELEDNDESLEDYLGRECPEPLKDIITLCENRLVLFDNKTKDESKKFYQVQQLLSLVNKVTAQNGGQPYTDEIFAEVKQGAMRLRDQQEEVDSLSLEKYTKREISEMKELMHKSYDEQLKRITEMVESKLRETTSRLEQQLAEEQAARLKAEENAQKAQFRSDEEIRKLREHLEQAH---EELRKRGENRCAIL 338
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_MOUSE (GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.974e-10 Identity = 56/187 (29.95%), Postives = 89/187 (47.59%), Query Frame = -1 Query: 731 TSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQI----------LNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIH-AVLVVFSVRTRFSQEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVLFDNK 1252 T + I + + GRT +GKS+ GN +LG F S + VT C L ++ G + + V+DTPG + + +E+ K + ++G+H A+LV + F QE A++ +Q L G NYM V+FT +ELEE + E+YL RE L +L +R + + Sbjct: 2 TDTNKMIINLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQLMQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTLLTLLDSVQHRYIFLSGR 187
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_RAT (GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 2.808e-9 Identity = 38/139 (27.34%), Postives = 67/139 (48.20%), Query Frame = -1 Query: 857 IKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQI----------LNVIDTPGLFDFSAGSEFIGKEIVKCID--LAKDGIHAVLVVFSVRTR-FSQEEEAALRSLQTLFGSKIVNYMIVVF 1234 I + ++G+T +GKS+ GN +LG F SR + VT C L ++ G + + V+DTPG + + +E+ K ++ ++G+H L+V F QE +++ +Q L G NY ++F Sbjct: 7 IINLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQLIQELLGDSWKNYTAILF 145
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_HUMAN (GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.086e-9 Identity = 39/145 (26.90%), Postives = 69/145 (47.59%), Query Frame = -1 Query: 857 TSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTV-----LKDGQI-----LNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIHAVLVVFSVRTRFS-QEEEAALRSLQTLFGSKIVNYMIVVF 1252 T P+ I + L G T +GKS+ GN +LG F S + VT+ C L ++ ++ G + + V+DTPG +++ +E+ + + + G+H L+V F QE ++ +Q L G +NY ++F Sbjct: 2 TDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQELLGHAWMNYTAILF 146
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: DRL38_ARATH (Probable disease resistance protein At5g47260 OS=Arabidopsis thaliana GN=At5g47260 PE=3 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 1.577e-8 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = -1 Query: 1055 FTSPSNGIKTVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKTVLKDGQILNVIDTPG 1255 TS S+ I+T+ LVG TG+G++AT N+I GKK +S ++ VT C+ K D I N+IDTPG Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPINNMIDTPG 940
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Match: GIMD1_BOVIN (GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 7.210e-8 Identity = 48/175 (27.43%), Postives = 84/175 (48.00%), Query Frame = -1 Query: 743 TVVLVGRTGNGKSATGNSILGKKSFKSRASSSGVTSSCELQKT------VLKDGQ----ILNVIDTPGLFDFSAGSEFIGKEIVKCI--DLAKDGIHAVLVVFSVRTRFS-QEEEAALRSLQTLFGSKIVNYMIVVFXXXXXXXXXXXXXXDYLGRECPQPLKDILGLCGNRLVL 1228 + L G T +GKS+ GN ILG F S + VT C L ++ + + GQ + V+DTPG + + +E+ + + ++G+H L+V QEE + ++ +Q L G +NY ++FT +++EE ++YL RE + L +L +R + Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQVQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQMIQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLKLLNSIQHRYIF 182 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013307 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013307 ID=g.arboreum_cottongen_reftransV1_0013307; Name=g.arboreum_cottongen_reftransV1_0013307; organism=Gossypium arboreum; type=contig; length=1375bpback to top |