g.arboreum_cottongen_reftransV1_0002977, g.arboreum_cottongen_reftransV1_0002977 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002977
Unique Nameg.arboreum_cottongen_reftransV1_0002977
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1106
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: G7IIR8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g044600 PE=4 SV=1)

HSP 1 Score: 474.167 bits (1219), Expect = 2.203e-163
Identity = 230/285 (80.70%), Postives = 260/285 (91.23%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KS+RFG++CKPLTWKHGDIFLMCLSSSQILS+YIL Q+SLP SY+SFLNKHGGKD VILQGVK+IASG PFTNL AI+K YK  GVDVKLDPNMK+PC+++HGNQSCS H+ISF  + YKRALPVYLPVYLIPALIVHR+ LL+RP TIL KG++GTARSSLFLS YC SAW+WTC LFR+F+ CN+PMVAMGTFP GL LAIEKKSRR+EISLYCLARAIES FTC+AD GYLP+S  +KRADVV+FSLSTAIIMHCYAQER+VFRSKYL+VLDWVFGV
Sbjct:   67 SRCGIKSERFGRICKPLTWKHGDIFLMCLSSSQILSAYILNQESLPASYKSFLNKHGGKDPVILQGVKDIASGKPFTNLNAIKKYYKTMGVDVKLDPNMKVPCTIVHGNQSCSGHIISFLIQAYKRALPVYLPVYLIPALIVHRKGLLQRPYTILAKGLIGTARSSLFLSVYCASAWMWTCFLFRIFKTCNVPMVAMGTFPPGLGLAIEKKSRRMEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAIIMHCYAQERDVFRSKYLNVLDWVFGV 351          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: F6H0Q1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05640 PE=4 SV=1)

HSP 1 Score: 481.871 bits (1239), Expect = 2.625e-163
Identity = 246/298 (82.55%), Postives = 271/298 (90.94%), Query Frame = -3
Query:  211 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGVXXXXXXXXXCKNR 1104
            SRCG+KSKRFG++CKPLTW HGDIFLMCLSSSQILS+YILKQ+SLPPSY+SFLNKHGGKD +ILQ VK+IASG+PFTNLEA+E  Y   GV +KLDP+MK+PCS+IHG+QSCS HV+SF  + YKRALPVYLPVYLIPALIVHRQDLLKRP TIL KG++GTARSSLFLS YC+SAW+WTCLLFR+ +RCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCL+RAIES FTCM D GYL  S  LKRADVVIFSLSTAIIMHCYAQEREVFRSKYL+VLDWVFGVPPPP ETP  KNR
Sbjct:  186 SRCGIKSKRFGRICKPLTWSHGDIFLMCLSSSQILSAYILKQESLPPSYKSFLNKHGGKDPIILQAVKDIASGIPFTNLEAVENYYNTIGVKIKLDPSMKVPCSIIHGHQSCSKHVVSFLIQAYKRALPVYLPVYLIPALIVHRQDLLKRPYTILGKGLLGTARSSLFLSVYCSSAWMWTCLLFRILKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLSRAIESFFTCMVDAGYLQPSKNLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLNVLDWVFGVPPPPDETPRYKNR 483          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: A0A067GMU1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010872mg PE=4 SV=1)

HSP 1 Score: 479.174 bits (1232), Expect = 2.798e-163
Identity = 230/285 (80.70%), Postives = 263/285 (92.28%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+ SKRFG++CKPLTWKHGD+FLMCLSSSQILS+Y+LKQ+SLPPSY+SFLNKHGGKD VILQG+KE+ASGLPF+NLEAIEK YK +GVD+KLDP MK+PCS++HGNQ C  HV+SFF + YKRALPVYLPVYLIPALIVHR+ LL+RP TIL KG++GTARSSLFLS YC+SAW+WTC LFR+F +CNIPMVAMGTFPTGL+LAIEKKSRR+EISLYCLARAIES   C+ D+GYLP+S  +KRADVVIFSLSTAIIMHCYAQEREVFRSKYL+VLDWVFGV
Sbjct:  201 SRCGINSKRFGRICKPLTWKHGDLFLMCLSSSQILSAYLLKQESLPPSYKSFLNKHGGKDAVILQGMKEMASGLPFSNLEAIEKFYKTTGVDIKLDPEMKVPCSIVHGNQGCLTHVVSFFIQAYKRALPVYLPVYLIPALIVHRKGLLERPYTILGKGLLGTARSSLFLSVYCSSAWMWTCFLFRIFEKCNIPMVAMGTFPTGLSLAIEKKSRRMEISLYCLARAIESFCACLTDIGYLPQSKNVKRADVVIFSLSTAIIMHCYAQEREVFRSKYLNVLDWVFGV 485          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: V7AYD8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G222900g PE=4 SV=1)

HSP 1 Score: 478.404 bits (1230), Expect = 3.311e-163
Identity = 234/285 (82.11%), Postives = 259/285 (90.88%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFGK  KPLTWKHGDIFLMCLSSSQILS+YILKQDSLP +Y+SFLNKHGGKD VILQGVK+IASG PFTNL AIE  YK  GVDVKL P+MK+PCS++HGNQSC+ H+ +F  + Y+RALPVYLPVYLIPALIVHR+ LLKRPSTIL KG+ GTARSSLFLS YC SAW+WTC LFR+F+RCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIES FTC+AD GYLP+S  +KRADVV+FSLSTAIIMHCYA+EREVFRSKYL+VLDWVFGV
Sbjct:  180 SRCGIKSKRFGKFFKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPATYKSFLNKHGGKDPVILQGVKDIASGKPFTNLGAIENYYKTMGVDVKLKPDMKVPCSIVHGNQSCTGHIFTFLLQAYQRALPVYLPVYLIPALIVHRKGLLKRPSTILAKGLFGTARSSLFLSVYCASAWMWTCFLFRIFKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESFFTCVADAGYLPQSRRIKRADVVVFSLSTAIIMHCYAEEREVFRSKYLNVLDWVFGV 464          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: V4T719_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003185mg PE=4 SV=1)

HSP 1 Score: 478.404 bits (1230), Expect = 5.433e-163
Identity = 233/285 (81.75%), Postives = 262/285 (91.93%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+ SKRFG++CKPLTWKHGD+FLMCLSSSQILS+YILKQ+SLPPSY+SFLNKHGGKD VILQGVKEIAS LPF+NLEAIEK YK  GVD+KLDP M++PCS++HGNQ C  HV+SFF + YKRALPVYLPVYLIPALIVHR+ LL+RP TIL KG++GT RSSLFLS YC+SAW+WTC LFR+F +CNIPMVAMGTFPTGL+LAIEKKSRR+EISLYCLARAIES  TC+AD+GYLP+S  LKRADVVIFSLSTAIIMHCYAQEREVFRSKYL+VLDWVFGV
Sbjct:  201 SRCGINSKRFGRICKPLTWKHGDLFLMCLSSSQILSAYILKQESLPPSYKSFLNKHGGKDAVILQGVKEIASCLPFSNLEAIEKFYKTMGVDIKLDPEMRVPCSIVHGNQGCLTHVVSFFIQAYKRALPVYLPVYLIPALIVHRKGLLERPYTILGKGLLGTTRSSLFLSVYCSSAWMWTCFLFRIFEKCNIPMVAMGTFPTGLSLAIEKKSRRMEISLYCLARAIESFCTCLADIGYLPQSKNLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLNVLDWVFGV 485          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: A0A022QLN4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010068mg PE=4 SV=1)

HSP 1 Score: 469.159 bits (1206), Expect = 4.808e-162
Identity = 231/285 (81.05%), Postives = 257/285 (90.18%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFG++CKPLTW HGDIFLMCLSSSQILS+YILKQDSLPPSY+SFLNKHG KD VIL GV+EIASGLPF+NL AIEK YK+SGVDVKLDP MKIPCS++HGNQSC  H  SF  + YKRALPVYLPVYLIPALIVHR+ LL  P  IL KG+ GTARSSLFLS YC+SAW+WTC+LFR+ +RCNIPMVA+GTFPTG+ALAIEKKSRRIEISLYCLARAIES FTCM DVG+LP+S  LKRADVV+FS+STAIIMHCYA ER+VFRSKYL+VLDWVFGV
Sbjct:   26 SRCGIKSKRFGRICKPLTWVHGDIFLMCLSSSQILSAYILKQDSLPPSYKSFLNKHGAKDAVILNGVREIASGLPFSNLGAIEKFYKSSGVDVKLDPQMKIPCSIVHGNQSCGTHFFSFLLQAYKRALPVYLPVYLIPALIVHRKGLLNSPFKILWKGLFGTARSSLFLSMYCSSAWIWTCILFRILKRCNIPMVAIGTFPTGIALAIEKKSRRIEISLYCLARAIESFFTCMGDVGHLPQSKNLKRADVVVFSVSTAIIMHCYAMERDVFRSKYLNVLDWVFGV 310          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: I1MHL0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 474.167 bits (1219), Expect = 2.727e-161
Identity = 238/307 (77.52%), Postives = 262/307 (85.34%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKR----------------------PSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFGK+CKPLTWKHGDIFLMCLSSSQILS+YILKQDSLP SY+SFLNKHGGKDLVILQGVK+IASG PFTNL AIEK YK  GV+VKLDPNMK+PCS++HGNQSCS H++SF  + Y+RALPVYLPVYLIPALIVHR+ LLK                       P TIL KG+ GTARSSLFLS YC SAW+WTC LFR+ +RCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIES FTC+AD GYLP+S  +KRADVV+FSLSTAIIMHCYA+EREVFRSKYL+VLDWVFGV
Sbjct:  181 SRCGIKSKRFGKICKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPASYKSFLNKHGGKDLVILQGVKDIASGKPFTNLGAIEKYYKTMGVNVKLDPNMKVPCSIVHGNQSCSGHILSFLVQAYQRALPVYLPVYLIPALIVHRKGLLKSGTYAGFVMKRASLEAWTINYSMPYTILAKGLFGTARSSLFLSVYCASAWMWTCFLFRILKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAIIMHCYAEEREVFRSKYLNVLDWVFGV 487          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: A0A0B2RM28_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_041534 PE=4 SV=1)

HSP 1 Score: 473.396 bits (1217), Expect = 5.301e-161
Identity = 238/307 (77.52%), Postives = 262/307 (85.34%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKR----------------------PSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFGK+CKPLTWKHGDIFLMCLSSSQILS+YILKQDSLP SY+SFLNKHGGKDLVILQGVK+IASG PFTNL AIEK YK  GV+VKLDPNMK+PCS++HGNQSCS H++SF  + Y+RALPVYLPVYLIPALIVHR+ LLK                       P TIL KG+ GTARSSLFLS YC SAW+WTC LFR+ +RCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIES FTC+AD GYLP+S  +KRADVV+FSLSTAIIMHCYA+EREVFRSKYL+VLDWVFGV
Sbjct:  185 SRCGIKSKRFGKICKPLTWKHGDIFLMCLSSSQILSAYILKQDSLPASYKSFLNKHGGKDLVILQGVKDIASGKPFTNLGAIEKYYKTMGVNVKLDPNMKVPCSIVHGNQSCSGHILSFLVQAYQRALPVYLPVYLIPALIVHRKGLLKSGTYAGFVMKRASLEAWTINYSMPYTILAKGLFGTARSSLFLSVYCASAWMWTCFLFRILKRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESFFTCIADAGYLPQSRRIKRADVVVFSLSTAIIMHCYAEEREVFRSKYLNVLDWVFGV 491          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: A0A0B0MIJ7_GOSAR (Transmembrane protein OS=Gossypium arboreum GN=F383_17106 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 9.994e-161
Identity = 230/285 (80.70%), Postives = 259/285 (90.88%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFGK CKPLTWKHGDIFLMCLS+S+ILSSYILKQD LPPSY+SFLN+HGGKD+VILQGVKE+ASGLPFT LEAIEK+YKA+GVDVKLDPNMKIPCSM+HGN+SC AH I+F  E YKRALPVYLPVYLIPALIVH Q L KRP TIL KGIV  ARSSLFL+ YCTSAW+WTC+LF   RRC+IP++A+G+FP GL++AIEKKSRR+EISLYCLARAIES FT MAD+GYLP+S  LKR DV+IFSLSTAIIMHCYAQERE+F SKYL+VLDW+FGV
Sbjct:  148 SRCGIKSKRFGKFCKPLTWKHGDIFLMCLSTSEILSSYILKQDCLPPSYKSFLNQHGGKDIVILQGVKELASGLPFTTLEAIEKIYKATGVDVKLDPNMKIPCSMVHGNKSCRAHAITFLIEAYKRALPVYLPVYLIPALIVHHQGLFKRPCTILGKGIVDIARSSLFLATYCTSAWMWTCILFGFLRRCSIPLIAIGSFPAGLSVAIEKKSRRMEISLYCLARAIESFFTWMADIGYLPRSKNLKRPDVMIFSLSTAIIMHCYAQERELFNSKYLNVLDWIFGV 432          
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Match: A0A068TXR7_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034553001 PE=4 SV=1)

HSP 1 Score: 468.003 bits (1203), Expect = 1.347e-160
Identity = 225/285 (78.95%), Postives = 260/285 (91.23%), Query Frame = -3
Query:  250 SRCGMKSKRFGKLCKPLTWKHGDIFLMCXXXXXXXXXXXLKQDSLPPSYRSFLNKHGGKDLVILQGVKEIASGLPFTNLEAIEKLYKASGVDVKLDPNMKIPCSMIHGNQSCSAHVISFFTEGYKRALPVYLPVYLIPALIVHRQDLLKRPSTILRKGIVGTARSSLFLSAYCTSAWLWTCLLFRLFRRCNIPMVAMGTFPTGLALAIEKKSRRIEISLYCLARAIESLFTCMADVGYLPKSMYLKRADVVIFSLSTAIIMHCYAQEREVFRSKYLSVLDWVFGV 1104
            SRCG+KSKRFG++CKPLTW HGDIFLMCLSSSQILS+YILKQ+SLP SY+SFLNKHGGKD VILQGV++IA GLPF+NL+AIEK YK++G+D+ LDP MK+PCS++HG Q+C AH +SF  + YKRALPVYLPVYL PALIVHRQ LLKRP +IL +G++GT RSSLFLS YC SAW+WTCLLFRL +RCN+PMVAMGTFPTG+ALAIEKKSRRIEI+LYC+ARAIES FTCMADVGYLP+S  LKRADVV+FS+STAIIMHCYA ER+VFRSKYL+VLDWVFGV
Sbjct:   91 SRCGIKSKRFGRICKPLTWAHGDIFLMCLSSSQILSAYILKQESLPSSYKSFLNKHGGKDAVILQGVRDIACGLPFSNLDAIEKHYKSTGIDITLDPKMKVPCSIVHGKQACEAHFVSFLLQAYKRALPVYLPVYLFPALIVHRQGLLKRPFSILARGLLGTFRSSLFLSTYCASAWMWTCLLFRLLKRCNVPMVAMGTFPTGMALAIEKKSRRIEIALYCMARAIESFFTCMADVGYLPQSKKLKRADVVVFSISTAIIMHCYAVERDVFRSKYLNVLDWVFGV 375          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7IIR8_MEDTR2.203e-16380.70Uncharacterized protein OS=Medicago truncatula GN=... [more]
F6H0Q1_VITVI2.625e-16382.55Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067GMU1_CITSI2.798e-16380.70Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V7AYD8_PHAVU3.311e-16382.11Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
V4T719_9ROSI5.433e-16381.75Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A022QLN4_ERYGU4.808e-16281.05Uncharacterized protein OS=Erythranthe guttata GN=... [more]
I1MHL0_SOYBN2.727e-16177.52Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
A0A0B2RM28_GLYSO5.301e-16177.52Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
A0A0B0MIJ7_GOSAR9.994e-16180.70Transmembrane protein OS=Gossypium arboreum GN=F38... [more]
A0A068TXR7_COFCA1.347e-16078.95Coffea canephora DH200=94 genomic scaffold, scaffo... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0002977 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031926Transmembrane protein 135, N-terminal domainPFAMPF15982TMEM135_C_richcoord: 106..227
e-value: 6.8E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR12459:SF6TRANSMEMBRANE PROTEINcoord: 1..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..204
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..261
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 262..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..161
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..239
IPR026749Transmembrane protein 135PANTHERPTHR12459UNCHARACTERIZEDcoord: 1..285

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002977 ID=g.arboreum_cottongen_reftransV1_0002977; Name=g.arboreum_cottongen_reftransV1_0002977; organism=Gossypium arboreum; type=contig; length=1106bp
TTGGAATCTCATTCAAAATGCATTGCTATATTTAGTACAAGTCCCACAGC
ACACCCGTGCAGACCCAAGAGAAGAATACATGAATTCGAGGACTTTCCAC
ACCAGGGCCTGGATTCAAGCCCTTAGACCCAACATGCAATTAGAGTCGTA
AGACGAACACTTCGGTGGCTGCCAGGAAATACCTGAGTCCAAAGCCCTGT
GAACTGCTCATCTGTTTTTGCAGGGAGGAGTTTCACATGGGGGAGGGGGC
ACACCAAAGACCCAATCGAGAACACTTAAGTACTTGGAACGGAACACTTC
CCTCTCCTGTGCGTAGCAGTGCATTATTATCGCTGTTGACAAGCTAAATA
TTACCACATCAGCTCTCTTCAGATACATTGACTTGGGCAAATACCCAACA
TCTGCCATGCATGTAAACAAGCTCTCTATGGCTCGTGCAAGGCAGTAGAG
TGATATCTCAATCCGTCTACTTTTCTTCTCAATTGCCAAGGCCAGACCCG
TCGGAAACGTTCCCATTGCTACCATCGGTATGTTACATCTTCTGAAAAGC
CTAAACAGCAGGCAAGTCCACAACCAAGCAGATGTGCAATAAGCAGACAA
AAATAAGCTTGATCTGGCAGTACCAACAATACCCTTTCTTAATATTGTGG
AAGGCCTTTTTAAGAGGTCTTGACGATGAACTATTAATGCAGGAATTAAA
TAAACTGGAAGATATACTGGTAATGCCCTTTTATATCCTTCAGTGAAAAA
AGAAATAACATGTGCACTGCATGATTGATTCCCATGTATCATCGAGCAAG
GGATTTTCATGTTTGGATCTAATTTAACATCTACTCCTGATGCCTTGTAA
AGTTTCTCTATTGCCTCCAAATTAGTGAATGGAAGACCACTGGCAATCTC
TTTTACACCTTGCAAGATGACAAGATCCTTTCCACCATGTTTATTGAGAA
AGGACCTATATGATGGGGGCAAACTGTCTTGCTTCAAAATGTAAGATGAC
AAAATTTGCGAAGAGGAGAGACACATAAGGAATATGTCACCATGCTTCCA
TGTAAGAGGTTTACAAAGCTTCCCAAATCGTTTACTCTTCATTCCGCAGC
GCGAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR031926TMEM135_N
IPR026749Tmem135