g.arboreum_cottongen_reftransV1_0012685, g.arboreum_cottongen_reftransV1_0012685 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: A0A0D2NJR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G006500 PE=4 SV=1) HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0 Identity = 342/353 (96.88%), Postives = 344/353 (97.45%), Query Frame = 3 Query: 54 MAKNMGVAGAAASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMDNQEHINDSNSEADRKHEINANISXXXXXXXXXXXCPXXXXXXXXXXXXSLAA 1112 MAKNMGVA AAA SELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFL SGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSKEEKQEVEEEEDD SHQ KKKKNKGRIHDVQYMD++EHINDSNSEAD KHEINANISTKKKKTALKKLC IDIKVKDKKKKKSLAA Sbjct: 1 MAKNMGVAVAAALSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLGSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSKEEKQEVEEEEDDTSHQ-KTKKKKNKGRIHDVQYMDDREHINDSNSEADGKHEINANISTKKKKTALKKLCSIDIKVKDKKKKKSLAA 352
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: A0A0D2Q182_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G006500 PE=4 SV=1) HSP 1 Score: 461.84 bits (1187), Expect = 3.109e-158 Identity = 227/232 (97.84%), Postives = 227/232 (97.84%), Query Frame = 3 Query: 54 MAKNMGVAGAAASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSF 749 MAKNMGVA AAA SELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFL SGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIR Sbjct: 1 MAKNMGVAVAAALSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLGSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRKL 232 HSP 2 Score: 68.5514 bits (166), Expect = 1.119e-9 Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = 1 Query: 943 FSTWIIKNILMTLTLRLIENMKSMRISQPRKRRLH 1047 FSTW+I+NILMTLTLRL+ENMKSMRISQPRKRRLH Sbjct: 256 FSTWMIENILMTLTLRLMENMKSMRISQPRKRRLH 290
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: A0A061DJ97_THECC (Ribosomal protein L1p/L10e family, putative OS=Theobroma cacao GN=TCM_001556 PE=4 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 1.079e-147 Identity = 244/305 (80.00%), Postives = 271/305 (88.85%), Query Frame = 3 Query: 102 NVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPIID---DPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMDNQEHINDSNSEADRKHE 1007 VEKAVNALLKWRDSQS +QKPQLLEQDE LYLIVSLKKIPQK RVNP KVPLPHP+ID DPAELCL IDDRSKSG+TKDAASKKIKSENIPI+KVIKLSKLKTDY+ FEAKRKLCDSYDMFFADKRI+PLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIH +SA+LFLS+GTC VVKV KLS++KKEIV+NV AAI+GIAE VPSKWGNIRSFHLKLLDSLALPL+QA+PDLRLKILA+AD+ + E+++ EE DAS+QK KK KK+KGRIH+VQYMD E+ ND++S A RK E Sbjct: 23 TVEKAVNALLKWRDSQSHSQKPQLLEQDELLYLIVSLKKIPQKPRVNPHKVPLPHPLIDPSTDPAELCLVIDDRSKSGLTKDAASKKIKSENIPISKVIKLSKLKTDYRAFEAKRKLCDSYDMFFADKRILPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHKGYASALLFLSTGTCSVVKVGKLSMDKKEIVDNVTAAIHGIAEIVPSKWGNIRSFHLKLLDSLALPLYQAVPDLRLKILAEADNPSKEVLEEKQEEE---DASYQKKKKHKKSKGRIHEVQYMD--ENSNDTDSGAKRKDE 322
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: W9RT08_9ROSA (Ribosomal L1 domain-containing protein 1 OS=Morus notabilis GN=L484_021401 PE=4 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 4.760e-124 Identity = 188/292 (64.38%), Postives = 231/292 (79.11%), Query Frame = 3 Query: 84 AASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPI-IDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMD 956 A S V++AVN+LLKWR+S+SQ Q PQLL+ DEF+YLI++LKKIP K R+N K+PLPHP+ + +ELCLFIDDR KSG+TKD A KKIKSE IP++KV+KLSKLK+DY+PFEAKRKLCDSYDMFFADKR++PLLPRLLGK FFKK+KIPVPVDLKH NWKEQI AC SA+LFL +GTC VV+VAK S+ EI EN +AAINGIAE VP KWGN+RSFHLKLL+S+ALP++QA+PD++LKI + E+ + + +D K KKK RIH+V+YMD Sbjct: 18 ARMSPKTVQRAVNSLLKWRNSKSQTQNPQLLDDDEFVYLILTLKKIPSKDRINAHKIPLPHPLHAGESSELCLFIDDRPKSGLTKDDAMKKIKSEGIPVSKVLKLSKLKSDYRPFEAKRKLCDSYDMFFADKRVVPLLPRLLGKHFFKKRKIPVPVDLKHQNWKEQIEKACGSALLFLRTGTCSVVRVAKASMGAAEIAENAMAAINGIAEIVPRKWGNVRSFHLKLLESVALPVYQALPDIKLKIEGIKEDEEKKTEKGEGDKRVGEDEKAGKKKKKG----RIHEVRYMD 305
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: A0A067F0Q1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014066mg PE=4 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 9.123e-124 Identity = 189/299 (63.21%), Postives = 237/299 (79.26%), Query Frame = 3 Query: 75 AGAAASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPII----DDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMDN 959 AG+ S + VE+AV ALLKW S SQ QKPQLLEQD+F+YLI++LKKIPQ +R N K+PLPH ++ D+P E+CL +DDR KS +TKDA KKIK++N+PI KVIK++KLKTDY+PFEAKRKLCDSYD+F ADKR++PLLP+LLGK FFKKKKIPVPVDLKH NWKEQI C SA+L+L +GTC V+KV K+S+ ++I ENVIAAING+AE VP KWGN+RSFHLKLL+SLALP++QA+PDL+LKI ++ +++ E E ED H KK KK KGRIH+V+YMD+ Sbjct: 15 AGSRVSPK-TVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKIPQVSRTNAFKIPLPHSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKITKLKTDYRPFEAKRKLCDSYDIFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKEQIEKVCGSALLYLRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHLKLLESLALPVYQAVPDLKLKIEGVKENEGEGQDKDSEKENAEDVNDHGSKKKLKKKKGRIHEVRYMDS 312
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: V4SRI4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031604mg PE=4 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 7.594e-123 Identity = 189/299 (63.21%), Postives = 236/299 (78.93%), Query Frame = 3 Query: 75 AGAAASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPII----DDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMDN 959 AG+ S + VE+AV ALLKW S SQ QKPQLLEQD+F+YLI++LKK+PQ +R N K+PLPH ++ D+P E+CL +DDR KS +TKDA KKIK++N+PI KVIK++KLKTDY+PFEAKRKLCDSYDMF ADKR++PLLP+LLGK FFKKKKIPVPVDLKH NWKEQI C SA+L+L +GTC V+KV K+S+ ++I ENVIAAING+AE VP KWGN+RSFHLKLL+SLALP++QA+PDL+LKI + ++K+ E ED H KK KK KGRIH+V+YMD+ Sbjct: 15 AGSRVSPK-TVERAVKALLKWLKSNSQTQKPQLLEQDDFVYLILTLKKVPQVSRTNAFKIPLPHSLLGNDSDNPPEICLIMDDRPKSNLTKDAVMKKIKNDNLPITKVIKITKLKTDYRPFEAKRKLCDSYDMFLADKRVVPLLPKLLGKHFFKKKKIPVPVDLKHQNWKEQIEKVCGSALLYLRTGTCSVLKVGKVSMGAEDIAENVIAAINGVAEIVPRKWGNVRSFHLKLLESLALPVYQAVPDLKLKIEG-VKENEGEGQDKESKENAEDVNDHGSKKKLKKKKGRIHEVRYMDS 311
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: A0A067L5R8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22354 PE=4 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 1.347e-119 Identity = 175/250 (70.00%), Postives = 213/250 (85.20%), Query Frame = 3 Query: 84 AASSELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKA--RVNPIKVPLPHPIID---DPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKI 818 + S +E+A+ ALLKWR ++S+ QKPQLLE DEF+YLI++LKKIPQK RVNP KV LP+P+I+ D +ELCL IDDR KSG+TKDAA KKI+++NIPI+K+IKLSKLKTDY+PFEAKRKLCDSYDMFFAD+R+IPLLP++LGKQFFKKKKIPV VDLKH NWKEQI AC S +LFLS+GTC VVKV ++S+ K+E+V NV+AAIN IAE VP KWG IRS HLKLL+SLALPL++A+PD +LKI Sbjct: 8 SGVSPKTIERAIGALLKWRAAKSETQKPQLLESDEFVYLILTLKKIPQKGVSRVNPYKVSLPNPLINPQNDNSELCLIIDDRPKSGLTKDAAQKKIQNDNIPISKIIKLSKLKTDYRPFEAKRKLCDSYDMFFADRRVIPLLPKMLGKQFFKKKKIPVAVDLKHKNWKEQIDKACGSGLLFLSTGTCSVVKVGRVSMGKEEMVNNVVAAINEIAEIVPRKWGGIRSLHLKLLESLALPLYEALPDFKLKI 257
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: V4L1Q6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006007mg PE=4 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 3.010e-117 Identity = 185/319 (57.99%), Postives = 233/319 (73.04%), Query Frame = 3 Query: 102 NVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPII---DDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXD----DASHQXXXXXXXXXG----RIHDVQYMD-NQEHINDSNSEADRKHEINANI 1022 V+ AVNALLKWR +S+ +KPQLLEQDEF+YLIV+LKKIPQ +R N +V LPHP+I +D ELCL IDDR KSG+TKD A KKIKSENIP+ KV+KLSKLKTDY+PFEAKRKLCDSYDMFFAD+R+IPLLPRL+GK+FF +KKIPVPVDLKH NWKEQ+ AC SAM F+ +GTC V+KV KLS+E +EI ENV+ +NG+ E +P+KW +RS HLKL +S+ALP++Q++PDL+LKI DA S ++ + + + D D S K RIH+V+YMD N + D + D E+N I Sbjct: 28 TVDGAVNALLKWRSEKSKTEKPQLLEQDEFVYLIVTLKKIPQTSRTNAYRVLLPHPLINPAEDSPELCLIIDDRPKSGLTKDDAMKKIKSENIPVTKVLKLSKLKTDYRPFEAKRKLCDSYDMFFADRRVIPLLPRLIGKKFFARKKIPVPVDLKHKNWKEQMEKACGSAMFFMRTGTCSVIKVGKLSMESEEIAENVMETLNGVVEFLPNKWKYVRSLHLKLSESVALPIYQSVPDLKLKI--DAFDTEKSVVKEVKKKGKSDAVVVDGSESSEKSVAVKGKKKKGRIHEVRYMDSNVSEVLDEDEIGD--VEVNNEI 342
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: D7LW62_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486318 PE=4 SV=1) HSP 1 Score: 358.992 bits (920), Expect = 3.901e-116 Identity = 183/292 (62.67%), Postives = 222/292 (76.03%), Query Frame = 3 Query: 93 SELNVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKARVNPIKVPLPHPII---DDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYMDN 959 S V A+N L KWR +S+ +KPQLLEQDE +YLI SLKKIPQ +R N ++PLPHP+I +D ELCL IDDR KSG+TK KKIKSENIPI KVIKLSKLKTDYK FEAKRKLCDSYDMFFAD+RIIPLLPR++GK+FF KKIPV +DLKH NWK+QI AC SAM F+ +GTC V+KV KLS+E EI+ENV+A +NG+ E +P+KW +RS HLKL +SLALP++Q++PDL+LKI A A + KEEK+ E D T K KK KGRIH+V+YMD+ Sbjct: 27 SPYTVGSALNGLTKWRSEKSKTEKPQLLEQDELVYLIASLKKIPQTSRTNAYRIPLPHPLINPTEDSPELCLIIDDRPKSGLTKADVMKKIKSENIPITKVIKLSKLKTDYKAFEAKRKLCDSYDMFFADRRIIPLLPRVIGKKFFTSKKIPVAIDLKHKNWKQQIEKACGSAMFFIRTGTCSVIKVGKLSMELNEIIENVMATLNGVVELLPNKWKYVRSLHLKLSESLALPIYQSVPDLKLKIDAFATGKSVVKEEKEGEVEAADGGEKSVTGKGKKKKGRIHEVRYMDS 318
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Match: B9IDC0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12760g PE=4 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 5.037e-116 Identity = 180/290 (62.07%), Postives = 224/290 (77.24%), Query Frame = 3 Query: 102 NVEKAVNALLKWRDSQSQAQKPQLLEQDEFLYLIVSLKKIPQKA--RVNPIKVPLPH----PIIDDPAELCLFIDDRSKSGITKDAASKKIKSENIPINKVIKLSKLKTDYKPFEAKRKLCDSYDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLKLLDSLALPLFQAMPDLRLKILADADHHTSSXXXXXXXXXXXDDASHQXXXXXXXXXGRIHDVQYM 953 VEKAVNALLKWR S QKPQLLEQDEF YLI++LKKIPQK R+N K+PLP+ P+I+ P E+CL IDDR KSG+ KDAA KKI+++N+PI+K+IK+SKLKTDY+PFEAKRKL DSYDMFFADKR++PLLP++LGKQFFKKKKIPV +DLKH+NWKEQI AC SA+L+L SGTC VVKV ++S+ ++EI +NV+AAINGIA+ VP KWG +RSFHLKLLDSLALP++Q +PD +LKI + + EE+ + K KGRI +V+YM Sbjct: 16 TVEKAVNALLKWRSSTLNTQKPQLLEQDEFFYLILTLKKIPQKGVSRINAHKIPLPNSLINPLIEAP-EICLIIDDRPKSGLNKDAAKKKIQNDNLPISKIIKVSKLKTDYRPFEAKRKLRDSYDMFFADKRVVPLLPKMLGKQFFKKKKIPVTLDLKHHNWKEQIDKACGSALLYLRSGTCSVVKVGRVSMSREEIAKNVMAAINGIADIVPRKWGGVRSFHLKLLDSLALPVYQVVPDSKLKIDGGPKEQENDEGVVSVEEEKAKEGR------VGKKKGRIQEVRYM 298
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy Swiss-Prot
Match: RL10A_NEUCR (60S ribosomal protein L10a OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=crp-74 PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 6.815e-7 Identity = 29/102 (28.43%), Postives = 50/102 (49.02%), Query Frame = 3 Query: 453 YDMFFADKRIIPLLPRLLGKQFFKKKKIPVPVDLKHNNWKEQIHNACSSAMLFLSSGTCCVVKVAKLSLEKKEIVENVIAAINGIAERVPSKWGNIRSFHLK 758 YD F A + +I +PRLLG K K P PV ++ +++ S+ L C V V + + ++++V N++ AIN + + W N+ S +K Sbjct: 107 YDAFVASEALIKQIPRLLGPGLSKAGKFPTPVS-HSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLVSLLKKGWQNVGSLTIK 207 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0012685 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 11
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0012685 ID=g.arboreum_cottongen_reftransV1_0012685; Name=g.arboreum_cottongen_reftransV1_0012685; organism=Gossypium arboreum; type=contig; length=1356bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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