g.arboreum_cottongen_reftransV1_0008458, g.arboreum_cottongen_reftransV1_0008458 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A067GFE1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002333mg PE=4 SV=1) HSP 1 Score: 587.03 bits (1512), Expect = 0.000e+0 Identity = 287/410 (70.00%), Postives = 331/410 (80.73%), Query Frame = -3 Query: 274 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMII 1437 E+L FQ W KGEPVIVRN L TGLSWEPMVMWRALCE D S +MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L +D D + P ++ K TD + +D+ + DE++ A HS+ T GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLE+ + I Sbjct: 266 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEVYLVFI 675
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: V4MUI7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006772mg PE=4 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 284/403 (70.47%), Postives = 323/403 (80.15%), Query Frame = -3 Query: 232 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLL 1440 +++L HFQ W+KGEPVIVRNAL+N+ GLSWEPMVMWRALCE D TS +MS+V+AIDCLA CEV I FF+GY +GR+Y N WPEMLKLKDWPPS+ FE+LLPRHCDEFI LPFQEY+DPRSGILN+A KLP G LKPDLGPKTYIAYG S ELGRGDSVTKLH D+SDAVNIL HTA+V L +EQL+AIE LK +HK Q+ KE +D+ +N + + D+N + H TG ALWDIFRREDVPKLE YLRKH KEFRH YCSPV KV HPIHDQSF+LT+EHKRKLK EFG+EPWTF Q LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++I ECLRLTEEFRQLPK H+AREDKLEI KM+IY VE+A++EL LL Sbjct: 477 QDELLHFQEHWSKGEPVIVRNALNNTPGLSWEPMVMWRALCENVDPETSSKMSDVKAIDCLANCEVKIKARDFFEGYSKGRTYRNLWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIASKLPEGHLKPDLGPKTYIAYGNSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLTKEQLSAIEALKQRHKQQNEKE-----LQDQTCLNR-EEFVDDENGF--------------HHDETGSALWDIFRREDVPKLEEYLRKHCKEFRHTYCSPVTKVDHPIHDQSFFLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFRQLPKKHKAREDKLEIKKMVIYAVEQALKELETLL 859
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A067GF46_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002333mg PE=4 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 287/410 (70.00%), Postives = 331/410 (80.73%), Query Frame = -3 Query: 274 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMII 1437 E+L FQ W KGEPVIVRN L TGLSWEPMVMWRALCE D S +MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L +D D + P ++ K TD + +D+ + DE++ A HS+ T GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLE+ + I Sbjct: 296 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEVYLVFI 705
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D3BVN9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 585.874 bits (1509), Expect = 0.000e+0 Identity = 279/402 (69.40%), Postives = 319/402 (79.35%), Query Frame = -3 Query: 235 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSL-EMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDL 1437 E+L HFQ WAKGEPVI RN L ++ GLSWEPMVMWRALCE DL TS +MS VRAIDCL+ CEV +NT FF+GY +GR+Y NFWPEMLKLKDWPPS+ FEDLLPRHCDEFI LPFQEY+DPR+GILN+A KLP G++KPDLGPKTYIAYGI ELGRGDSVTKLH D+SDAVNILTHTA+V L +EQ++A++ +K KHK Q+ E+ G+ + N+ E+ S + TG ALWDIFRRED+PKLE YLRKH KEFRH YC PV KV HPIHDQS YLT+EHKRKLK EFG+EPWTF Q LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++IKECLRLTEEFRQLPKNH+AREDKLEI KM+IY +E+A+ EL L Sbjct: 533 EELLHFQEHWAKGEPVIARNVLDSTPGLSWEPMVMWRALCENADLSTSSSKMSHVRAIDCLSQCEVEVNTRDFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIAAKLPEGLIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAEVTLSQEQISAVKDIKQKHKEQNRFET-------------NGTGVACSQEEVEKNMPEIL---SHENDETGNALWDIFRREDIPKLEEYLRKHCKEFRHAYCCPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFRQLPKNHKAREDKLEIKKMVIYAIEQALIELETL 918
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: W9R989_9ROSA (Lysine-specific demethylase 3B OS=Morus notabilis GN=L484_014165 PE=4 SV=1) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 284/400 (71.00%), Postives = 315/400 (78.75%), Query Frame = -3 Query: 232 LSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLL 1431 LS FQ W GEPVIVRN L +TGLSWEPMVMWRAL E + T + EV+AIDCLA CEV INT QFF+GY EGR+Y N WPEMLKLKDWPPS+ F+D LPRHCDEFI LPFQEYTDPR GILNLAVKLP GVLKPDLGPKTYIAYG +ELGRGDSVTKLH D+SDAVNILTHTA+V L Q +I +LK HKAQD KE + N+ + + + D L S S+ TGGALWDIFRREDVPKLEAYLRKHSKEFRH YCSPV++V HPIHDQSFYL+ HK+KLKEE+GVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++I ECLRLTEEFRQLPKNHRAREDKLEI KM IY V+ A+++L DL+ Sbjct: 472 LSSFQKHWINGEPVIVRNVLEQATGLSWEPMVMWRALSENPEAETGSKFFEVKAIDCLAGCEVEINTRQFFEGYSEGRTYVNLWPEMLKLKDWPPSDKFDDFLPRHCDEFISALPFQEYTDPRIGILNLAVKLPLGVLKPDLGPKTYIAYGTQEELGRGDSVTKLHCDMSDAVNILTHTAEVGLSNLQRRSISRLKKLHKAQDEKEGIRTSSYLDEQTNDSEIHKVED----ETDGDFLPGFLSKESEETGGALWDIFRREDVPKLEAYLRKHSKEFRHTYCSPVQRVDHPIHDQSFYLSSAHKKKLKEEYGVEPWTFEQRLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFRQLPKNHRAREDKLEIKKMAIYAVDHALKDLEDLI 867
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: JMJ25_ARATH (Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.573e-148 Identity = 228/401 (56.86%), Postives = 285/401 (71.07%), Query Frame = -3 Query: 241 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDL-HTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELS 1440 ++DL HFQ W KGEPVIVRN L ++GLSWEPMVM RA + + H SL+ +V A+DCL CEV +N ++FF GY +GR WP +LKLKDWPP+ F+D LPRH +EF+ LP + YT P +G LNLAVKLP LKPD+GPKTY+A G +QELGRGDSVTKLH D+SDAVNILTH ++V I LK KH QD KE L +K + E I + +R N++ GALWDIFRRED+PKLE+Y+ KH KEFRH+YC PV +V+HPIHDQ+FYLT H KLKEE+G+EPWTF Q LG+AV IP GCPHQVRNLKSC KVA+DFVSP+++ ECLRLT+++R LP NH A+EDKL + KMI++ V++A+R+LS Sbjct: 512 QDDLKHFQHHWVKGEPVIVRNVLEATSGLSWEPMVMHRACRQISHVQHGSLK--DVVAVDCLDFCEVKVNLHEFFTGYTDGRYDRMGWPLVLKLKDWPPAKVFKDNLPRHAEEFLCSLPLKHYTHPVNGPLNLAVKLPQNCLKPDMGPKTYVASGFAQELGRGDSVTKLHCDMSDAVNILTHISEVP---NMQPGIGNLKKKHAEQDLKE-LYSSVANKEEMME----ILENSRQQVQNVE-----------TDDGALWDIFRREDIPKLESYIEKHHKEFRHLYCCPVSQVVHPIHDQNFYLTRYHIMKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCNKVALDFVSPENVSECLRLTKQYRLLPPNHFAKEDKLGVKKMIVHAVDKALRDLS 891
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3B_HUMAN (Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 2.789e-60 Identity = 139/397 (35.01%), Postives = 197/397 (49.62%), Query Frame = -3 Query: 244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVG-INTYQFFKGY---MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422 F+ W +G+PV+V W+P E +V ++C C + + F+ G+ + + P +LKLKDWPP +F D++P ++ + LP EYT R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDAVN++ + + +GE D E I+EG + DE+ + K GALW I+ +D K+ LRK +E +P + PIHDQS+YL +++L EE+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C RLT+EFR L H EDKL++ +I + V+ A+ L Sbjct: 1405 FRECWKQGQPVLVSGVHKKLKSELWKP----------EAFSQEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-IPIGEGA---------------------HDEEVLKTIDEG-------------DADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTL 1751
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3B_MOUSE (Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=2 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 6.342e-60 Identity = 139/397 (35.01%), Postives = 197/397 (49.62%), Query Frame = -3 Query: 244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVG-INTYQFFKGY---MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422 F+ W +G+PV+V W+P E +V ++C C + + F+ G+ + + P +LKLKDWPP +F D++P ++ + LP EYT R G LNLA +LP+ ++PDLGPK Y AYG+ R T LH D+SDAVN++ + + +GE D E I+EG + DE+ + K GALW I+ +D K+ LRK +E +P + PIHDQS+YL +++L EE+GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C RLT+EFR L H EDKL++ +I + V+ A+ L Sbjct: 1206 FRECWKQGQPVLVSGVHKKLKSELWKP----------EAFSQEFGDQDVDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVYVG-IPVGEGA---------------------HDEEVLKTIDEG-------------DADEVTKQRIHDGKEKPGALWHIYAAKDAEKIRELLRKVGEE--QGQENPPDH--DPIHDQSWYLDQILRKRLFEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYHAVKDAVGTL 1552
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_HUMAN (Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=4) HSP 1 Score: 214.927 bits (546), Expect = 1.182e-58 Identity = 137/401 (34.16%), Postives = 200/401 (49.88%), Query Frame = -3 Query: 244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440 K + + F+ W +G+PV+V W+P + E E +++ R + + VG F+ G+ + R + P +LKLKDWPP +F D++P D+ + +P EYT R G LNLA +LP ++PDLGPK Y AYG+ R T LH D+SDA N++ + K E++ E I +G + DEL + K GALW I+ +D K+ +L+K S+E +P + PIHDQS+YL +++L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L + H EDKL++ +I + V+ A+ L Sbjct: 960 KSNWNVFRECWKQGQPVMVSGVHHKLNSELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLKTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1311
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_CHICK (Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.882e-58 Identity = 134/393 (34.10%), Postives = 196/393 (49.87%), Query Frame = -3 Query: 253 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRS---YHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAI 1422 F+ W +G+PV+V W P + + E +++ R + + VG F+ G+ + S P +LKLKDWPP +F D++P D+ ++ +P EYT R G LNLA +LP ++PDLGPK Y AYG+ R T LH D+SDA N++ + K +A +E L+ D + DEL + S+ GALW I+ +D K+ +L+K ++E +PV+ PIHDQS+YL +++L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L H EDKL++ +I + V+ A+ Sbjct: 969 FRECWKQGQPVMVSGVHHKLNADLWRPESFRKEFGQQE-----VDLVNCRTNEIITGATVG----DFWDGFEDISSRLRTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG---------------IPKGQADQEEEVLKT--------------------IQDGDSDELTIKRFTESREKPGALWHIYAAKDTEKIREFLKKVAEE--QGQENPVDH--DPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDAV 1312
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KD3AA_XENLA (Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-a PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 2.659e-58 Identity = 147/417 (35.25%), Postives = 207/417 (49.64%), Query Frame = -3 Query: 199 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEM-LKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN*ASLCKL 1440 K + + F+ W +G+PVIV +N W P R + E ++ R D + VG F++G+ + R ++ M LKLKDWPP +F D + ++ + +P EYT R G LNLA +LPA ++PDLGPK Y AYG+ R T LH D+SDA N++ + + GE D ++ + R D + DEL + K GALW IF +D K+ +L+K ++E H +P + PIHDQS+YL +++L +E GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L H EDKL++ +I + V+ +I L N ASL KL Sbjct: 969 KSNWNVFRECWKQGQPVIVSGIHNNLNSELWRPESFRREFGDQE-----ADLVNCRTNDIITGATVG----DFWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVYVG-IPKGE---------------HDQEQEVIR-------------------TIQDGDADELTIKRYIEFKEKPGALWHIFAAKDTEKIRQFLKKVAEEQGHE--NPPDH--DPIHDQSWYLDNTLRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAILK-----ANEASLGKL 1331
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_RAT (Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 9.372e-58 Identity = 136/403 (33.75%), Postives = 200/403 (49.63%), Query Frame = -3 Query: 244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEG----RSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440 K + + F+ W +G+PV+V W+P + E E +++ R + + VG F+ G+ + ++ P +LKLKDWPP +F D++P D+ + +P EYT R G LNLA +LP ++PDLGPK Y AYG+ R T LH D+SDA N++ + K E++ E I +G + DEL + K GALW I+ +D K+ +L+K S+E +P + PIHDQS+YL +++L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L + H EDKL++ +I + V+ A+ L Sbjct: 844 KSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNEKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLRTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQE--NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRHLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1197
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KDM3A_MOUSE (Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.267e-57 Identity = 136/403 (33.75%), Postives = 200/403 (49.63%), Query Frame = -3 Query: 244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEG----RSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440 K + + F+ W +G+PV+V W+P + E E +++ R + + VG F+ G+ + ++ P +LKLKDWPP +F D++P D+ + +P EYT R G LNLA +LP ++PDLGPK Y AYG+ R T LH D+SDA N++ + K E++ E I +G + DEL + K GALW I+ +D K+ +L+K S+E +P + PIHDQS+YL +++L +E+GV+ W Q LG+ VFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L + H EDKL++ +I + V+ A+ L Sbjct: 960 KSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGEQE-----VDLVNCRTNEIITGATVG----DFWDGFEDVPNRLKNDKEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGI----------------------PKGQCEQEEEVLRTIQDG-------------DSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQGQD--NPADH--DPIHDQSWYLDRSLRKRLYQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1313
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: KD3AB_XENLA (Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-b PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.016e-57 Identity = 140/402 (34.83%), Postives = 202/402 (50.25%), Query Frame = -3 Query: 244 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGY--MEGRSYHNFWPEM-LKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1440 K + + F+ W +G+PV+V +N W P R + E ++ R D + VG F+ G+ + GR ++ M LKLKDWPP +F D + ++ + +P EYT R G LNLA +LP ++PDLGPK Y AYG+ R T LH D+SDA N++ + + GE ++D+E I +G + DEL + K GALW I+ +D K+ +L+K ++E H +P + PIHDQS+YL +++L +E GV+ W Q LG+AVFIPAG PHQV NL SC KVA DFVSP+ +K C LT+EFR L H EDKL++ +I + V+ +I L Sbjct: 972 KSNWNVFRECWKQGQPVMVSGVHNNLNSELWRPESFRREFGDQE-----ADLVNCRTNDIITGATVG----DFWDGFEDIPGRLKNDTGESMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVG-IPKGEH---------------------DQDQEVLRTIQDG-------------DADELTIKRFIEFKEKPGALWHIYAAKDTEKIRQFLKKVAEEEGHE--NPPDH--DPIHDQSWYLDNILRKRLLQEHGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFCLTQEFRYLSHTHTNHEDKLQVKNVIYHAVKDSIAIL 1324
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: JHD2C_HUMAN (Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 3.027e-43 Identity = 118/396 (29.80%), Postives = 192/396 (48.48%), Query Frame = -3 Query: 244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYME-GRSYHNFWPE--MLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422 F+ W +G+P +V + + +S +W+A E + + ++C N +F+ G+ E + N E +LKLKDWP +F+ ++P ++ ++ LP EY +P G NLA LP ++PDLGP+ AYG+ T LH ++SD VNIL + +A G L+ LK ++ + ++D++ + S GALW I+ +DV K+ +L+K SKE + + P PI DQS+Y+ + +++L EE+GV T Q LG+A+ +PAG HQV+N SC +V DFVSP+ + E LT+E R L K +DKL++ ++ + V+ +R L Sbjct: 2182 FKECWKQGQPAVV-SGVHKKMNIS-----LWKA----ESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVG-IAKGNGILSKAGILK---------------------------------KFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLL-KEEINYDDKLQVKNILYHAVKEMVRAL 2527 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008458 ID=g.arboreum_cottongen_reftransV1_0008458; Name=g.arboreum_cottongen_reftransV1_0008458; organism=Gossypium arboreum; type=contig; length=1442bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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