g.arboreum_cottongen_reftransV1_0008458, g.arboreum_cottongen_reftransV1_0008458 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0B0PN99_GOSAR (Lysine-specific demethylase 3B OS=Gossypium arboreum GN=F383_11237 PE=4 SV=1) HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = -3 Query: 220 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1440 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN Sbjct: 486 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 892
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2RS62_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1) HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0 Identity = 396/407 (97.30%), Postives = 402/407 (98.77%), Query Frame = -3 Query: 220 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1440 KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDL+STPN Sbjct: 486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLISTPN 892
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A061GNU1_THECC (Transcription factor jumonji domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_030286 PE=4 SV=1) HSP 1 Score: 704.901 bits (1818), Expect = 0.000e+0 Identity = 349/430 (81.16%), Postives = 370/430 (86.05%), Query Frame = -3 Query: 214 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKG-------------ITDQ-NRYSDNNI-----DELRARNSG---HSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN*A 1437 EDLSHFQM WA+GEPVIV+NAL+NSTGLSWEPMV WRALCE D +SL+MSEV+AIDCLA CEV INT QFFKGYMEGR Y NFWPEMLKLKDWPPSN FEDLLPRHCDEFI LPFQEY+DPRSGILNLAVKLP GVLKPDLGPKTYIAYGI++ELGRGDSVTKLH D+SDAVNILTH ADVAL +EQL AIE+LKMKHKAQD KE LER+R DKHPI EG I DQ + YSDNNI DEL AR G K TGGALWDIFRREDVPKLEAYLRKHSKEFRH YCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQ+LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++IKECLRLTEEFRQLPKNHRAREDKLEI KMIIYGVERAI+EL +L+STPN A Sbjct: 488 EDLSHFQMHWARGEPVIVQNALANSTGLSWEPMVTWRALCEKVDSDSSLDMSEVKAIDCLAGCEVEINTRQFFKGYMEGRRYDNFWPEMLKLKDWPPSNEFEDLLPRHCDEFISALPFQEYSDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNILTHIADVALSKEQLAAIEELKMKHKAQDEKEHLERERLDKHPIKEGLDAESSDLENKMDAPEIRDQKDHYSDNNILDASPDELGARIPGLYTSRKETGGALWDIFRREDVPKLEAYLRKHSKEFRHTYCSPVEQVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQHLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFRQLPKNHRAREDKLEIKKMIIYGVERAIKELEELVSTPNSA 917
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2Q5J8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1) HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0 Identity = 305/315 (96.83%), Postives = 310/315 (98.41%), Query Frame = -3 Query: 496 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFG 1440 KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VIHPIHDQSFYLTMEHKRKLKEEFG Sbjct: 486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIHPIHDQSFYLTMEHKRKLKEEFG 800
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: V4TR56_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014405mg PE=4 SV=1) HSP 1 Score: 607.06 bits (1564), Expect = 0.000e+0 Identity = 297/428 (69.39%), Postives = 343/428 (80.14%), Query Frame = -3 Query: 220 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1437 E+L FQ W KGEPVIVRN L TGLSWEPMVMWRALCE D S MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L RD D + P ++ K TD + +D+ + DE++ A HS+ T GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLEI KMI+Y V +AI++ + L+ N Sbjct: 296 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSMMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVRDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEIQKMILYAVAQAIKDANSLIPALN 723
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A067GSB7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002333mg PE=4 SV=1) HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0 Identity = 296/428 (69.16%), Postives = 344/428 (80.37%), Query Frame = -3 Query: 220 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDRED---KHPINEGRKGITDQNRYSDNNI-------------DELR--ARNSGHSKNT----GGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLSTPN 1437 E+L FQ W KGEPVIVRN L TGLSWEPMVMWRALCE D S +MSEV+AIDCLA CEV I+T QFFKGY +GR+Y NFWPEMLKLKDWPPS+ FEDL+PRHCDEFI LPFQEY+DPR+GILNLAVKLP+GVLKPDLGPKTYIAYG+++ELGRGDSVTKLH D+SDAVNILTHT +V L EEQ +A+E+LK +H+AQD KE+L +D D + P ++ K TD + +D+ + DE++ A HS+ T GGALWDIFRR+DVPKLEAYLRKH KEFRH+YCSPVE+VIHPIHDQ FYL+ EHK+KLKEEFGVEPWTFEQ LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP+++ ECLRLT+EFR LPKNHRAREDKLEI KMI+Y V +AI++ + L+ N Sbjct: 296 EELFRFQKHWIKGEPVIVRNVLDKVTGLSWEPMVMWRALCENVDSEVSSKMSEVKAIDCLASCEVEISTRQFFKGYTQGRTYDNFWPEMLKLKDWPPSDKFEDLMPRHCDEFISALPFQEYSDPRAGILNLAVKLPSGVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDMSDAVNILTHTEEVLLTEEQHSAVERLKKEHRAQDLKENLVQDGMDESIEEPNSDNNKEDTDVSEINDSELLPSGIRGEFKMSRDEMQGTAFTCPHSEGTMVESGGALWDIFRRQDVPKLEAYLRKHFKEFRHVYCSPVEQVIHPIHDQCFYLSSEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDECLRLTKEFRLLPKNHRAREDKLEIKKMILYAVAQAIKDANSLIPALN 723
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2T0K3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G012300 PE=4 SV=1) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 293/393 (74.55%), Postives = 327/393 (83.21%), Query Frame = -3 Query: 289 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGI--TDQNRYSDNNIDELRARNSGHS--------KNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEI 1437 E HFQ +WAKGEPVIV+N L+NS+GLSWEPMVMWRALC+ LEM EV+AIDCLA CEV INT QFFKGY EGR+Y+N WPEMLKLKDWPPS+ FEDLLPRHCDEFI +LPFQEY DPRSGILNLAVKLP VLKPDLGPKTYIAYG+++ELGRGDSVTKLH DLSDAVNILTHT++VAL +EQL A+EKLKMKHKAQD KESLER+R +KG ++ + DN + G S K+ GGALWDIFRREDVPKLEAYLR+H EFRH YCSPVEKVIHPIHDQSFYLT EHKR+LKE++GVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVA+DFVSP++I+ECLRLTEEFR+LPKNHRAREDKLE+ Sbjct: 643 EGFRHFQTRWAKGEPVIVKNTLANSSGLSWEPMVMWRALCK------RLEMPEVKAIDCLAGCEVEINTRQFFKGYTEGRAYNNLWPEMLKLKDWPPSDKFEDLLPRHCDEFISMLPFQEYCDPRSGILNLAVKLPNCVLKPDLGPKTYIAYGVAEELGRGDSVTKLHCDLSDAVNILTHTSEVALSDEQLAAMEKLKMKHKAQDEKESLERER--------LKKGFDESEATNWGDNILYVSSGEFRGASLPEPLTSRKDIGGALWDIFRREDVPKLEAYLREHYTEFRHTYCSPVEKVIHPIHDQSFYLTAEHKRRLKEKYGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVALDFVSPENIQECLRLTEEFRKLPKNHRAREDKLEV 1021
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: B9RXG4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903610 PE=4 SV=1) HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0 Identity = 289/424 (68.16%), Postives = 334/424 (78.77%), Query Frame = -3 Query: 226 EDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGI--------------TDQNRYSDNNIDELRA------RNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLST 1437 ++L FQ W KGEPVIVR+ L +T LSWEPMVMWRALCE DL T+ +MSEV+AIDCLA C+V INT QFFKGY GR+Y NFWPEMLKLKDWPPS+ FEDLLPRHCDEFI LPFQEY+DP++GILN+AVK P G+LKPDLGPKTYIAYG +ELGRGDSVTKLH D+SDAVNILTH +VAL EEQ T IE+LKMKH AQD KE LERD+ + H I + + I T+++ + +ELR + + GALWDIFRREDVPKLE YLRK+ EFRH YCSPVEKV+HPIHDQ FYLT+EHKRKLKEE+GVEPWTFEQ +GEA+FIPAGCPHQVRNLKSCTKVAVDFVSP++I ECL LTEEFRQLPKNHRAREDKLEI KMI+Y VE+AI++L ++ + Sbjct: 695 QELLRFQKHWLKGEPVIVRDTLEVTTHLSWEPMVMWRALCENVDLETNAKMSEVKAIDCLASCQVEINTRQFFKGYTGGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPKAGILNIAVKFPPGLLKPDLGPKTYIAYGTKEELGRGDSVTKLHCDMSDAVNILTHAVEVALSEEQSTCIEQLKMKHSAQDEKEYLERDKVNSHLIEQLDECIDSLSEDMDLLKIRETEKHSSALETDNELRGDTPTDESTGAATAGSSGALWDIFRREDVPKLEEYLRKYHMEFRHTYCSPVEKVVHPIHDQCFYLTLEHKRKLKEEYGVEPWTFEQRVGEAIFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLLLTEEFRQLPKNHRAREDKLEIKKMIVYAVEQAIKDLQKVICS 1118
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: A0A0D2NNM2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G082600 PE=4 SV=1) HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0 Identity = 282/293 (96.25%), Postives = 288/293 (98.29%), Query Frame = -3 Query: 562 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIH 1440 KEDLSHFQMKWAKGEPVIVRNAL+NSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRH DEFIRILPFQEYTDPRSGILNLAVKLP GVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQL AIEKLKMKHKAQDAKE LERDREDKHPINEGRKGITDQN+YSDNNID++ ARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVE+VI+ Sbjct: 486 KEDLSHFQMKWAKGEPVIVRNALANSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHYDEFIRILPFQEYTDPRSGILNLAVKLPPGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLAAIEKLKMKHKAQDAKEKLERDREDKHPINEGRKGITDQNQYSDNNIDDVGARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVERVIY 778
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Match: R0GP80_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10011915mg PE=4 SV=1) HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0 Identity = 287/404 (71.04%), Postives = 329/404 (81.44%), Query Frame = -3 Query: 229 KEDLSHFQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYMEGRSYHNFWPEMLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSDLLS 1440 +E+L HFQ W+KGEPVIVRNAL+N+ GLSWEPMVMWRALCE D TS +M++V+AIDCLA CEV INT FF+GY +GR Y NFWPEMLKLKDWPPS+ FE+LLPRHCDEFI LPFQEY+DPRSGILN+A KLP G+LKPDLGPKTYIAYG S ELGRGDSVTKLH D+SDAVNIL HTA+V L EEQ AIE LK KHK Q+ KE E++ +EG++ ++ +N Y D +TGGALWDIFRREDVPKLE YLRKH KEFRH +CSPV KV HPIHDQS +LT+EHKRKLK EFG+EPWTF Q LGEAVFIPAGCPHQVRNLKSCTKVAVDFVSP++I ECLRLT+EFRQLPKNH+AREDKLEI KM+IY VE+A++E+ LL+ Sbjct: 493 QEELLHFQEHWSKGEPVIVRNALNNTAGLSWEPMVMWRALCENVDSPTSTDMADVKAIDCLANCEVKINTRCFFEGYSKGRRYANFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIAAKLPEGLLKPDLGPKTYIAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLTEEQRVAIEALKQKHKLQNEKELQEQNG------SEGKEIVSYENGYHD---------------DTGGALWDIFRREDVPKLEEYLRKHCKEFRHTFCSPVTKVYHPIHDQSCFLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIDECLRLTDEFRQLPKNHKAREDKLEIKKMVIYAVEQALKEVETLLA 875
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: JHD2C_MOUSE (Probable JmjC domain-containing histone demethylation protein 2C OS=Mus musculus GN=Jmjd1c PE=1 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 4.867e-42 Identity = 117/396 (29.55%), Postives = 191/396 (48.23%), Query Frame = -3 Query: 244 FQMKWAKGEPVIVRNALSNSTGLSWEPMVMWRALCETEDLHTSLEMSEVRAIDCLACCEVGINTYQFFKGYME-GRSYHNFWPE--MLKLKDWPPSNNFEDLLPRHCDEFIRILPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTKLHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIREL 1422 F+ W +G+P +V + + +S +W+A E + + ++C N +F+ G+ E + N E +LKLKD P +F+ ++P ++F+R LP EY +P G NLA LP ++PDLGP+ AYG++ T LH + SD VN+L + +A G L+ LK ++ + +D++ + S GALW I+ +DV K+ +L+K SKE + + P PI DQS+Y+ + +++L EE+GV T Q LG+A+ +PAG HQV+N SC +V DFVSP+ + + LT+E R L K +DKL++ ++ + V+ +R L Sbjct: 1992 FKECWKQGQPAVV-SGVHKKMNIS-----LWKA----ESISLDFGDHQADLLNCKDSIVSNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVG-IAKGNGVLSKAGILK---------------------------------KFEEEELDDVLRKRLKDSSEIPGALWHIYAGKDVDKIREFLQKISKE-QGLEVLPEHD---PIRDQSWYVNRKLRQRLLEEYGVRACTLIQFLGDAIVLPAGTLHQVQNFHSCVQVTEDFVSPEHLVQSFHLTQELRLL-KEEINYDDKLQVKNILYHAVKEMVRAL 2337
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: HAIR_MOUSE (Lysine-specific demethylase hairless OS=Mus musculus GN=Hr PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.569e-19 Identity = 79/286 (27.62%), Postives = 124/286 (43.36%), Query Frame = -3 Query: 238 LPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTK-LHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSD 1092 LP EY G LNLA LP G+ L P+ + AYG++ RG TK L ++SD ++IL H A +L ++AQ K+ L G+ + +S + +W +FR +D ++ + F + C + P S YL +R+L+EE+GV WT Q GEAV +PAG PHQV+ L S V F+SP++ +L + LP +HR ++++ + V+ A+ L + Sbjct: 950 LPLPEYCA-HQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH------------AEAQLPPWYRAQ--KDFL--------------SGLDGEGLWSPGSQTS--------------TVWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLYHQGASLPPDHRML--YAQMDRAVFQAVKAAVGALQE 1180
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: HAIR_RAT (Lysine-specific demethylase hairless OS=Rattus norvegicus GN=Hr PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.242e-19 Identity = 79/286 (27.62%), Postives = 124/286 (43.36%), Query Frame = -3 Query: 238 LPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTK-LHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKNHRAREDKLEINKMIIYGVERAIRELSD 1092 LP EY G LNLA LP G+ L P+ + AYG++ RG TK L ++SD ++IL H A +L ++AQ K+ L G+ + +S + +W +FR +D ++ + F + C + P S YL +R+L+EE+GV WT Q GEAV +PAG PHQV+ L S V F+SP++ +L + LP +HR ++++ + V+ A+ L + Sbjct: 949 LPLPEYCA-HQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSH--RGHLGTKNLCVEVSDLISILVH------------AEAQLPPWYRAQ--KDFL--------------SGLDGEGLWSPGSQTS--------------TVWHVFRAQDAQRI--------RRFLQMVCPAGAGTLEPGAPGSCYLDSGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTISVTQHFLSPETSALSAQLCHQGASLPPDHRML--YAQMDRAVFQAVKVAVGTLQE 1179
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Match: HAIR_HUMAN (Lysine-specific demethylase hairless OS=Homo sapiens GN=HR PE=1 SV=5) HSP 1 Score: 91.2781 bits (225), Expect = 4.863e-18 Identity = 78/259 (30.12%), Postives = 112/259 (43.24%), Query Frame = -3 Query: 319 LPFQEYTDPRSGILNLAVKLPAGVLKPDLGPKTYIAYGISQELGRGDSVTK-LHYDLSDAVNILTHTADVALGEEQLTAIEKLKMKHKAQDAKESLERDREDKHPINEGRKGITDQNRYSDNNIDELRARNSGHSKNTGGALWDIFRREDVPKLEAYLRKHSKEFRHIYCSPVEKVIHPIHDQSFYLTMEHKRKLKEEFGVEPWTFEQNLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPQSIKECLRLTEEFRQLPKN 1092 LP EY G LNLA LP G+ L P+ + AYG+S RG TK L +++D V+IL H A L H+AQ K+ L G+ + +S G +T +W +FR +D ++ + F + C + P S YL +R+L+EE+GV WT Q GEAV +PAG PHQV+ L S V F+SP++ +L + LP + Sbjct: 957 LPLPEYCA-LHGKLNLASYLPPGLALRPLEPQLWAAYGVSPH--RGHLGTKNLCVEVADLVSILVH------------ADTPLPAWHRAQ--KDFL--------------SGLDGEGLWSP-----------GSQVST---VWHVFRAQDAQRI--------RRFLQMVCPAGAGALEPGAPGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLSPETSALSAQLCHQGPSLPPD 1162 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008458 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008458 ID=g.arboreum_cottongen_reftransV1_0008458; Name=g.arboreum_cottongen_reftransV1_0008458; organism=Gossypium arboreum; type=contig; length=1442bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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