g.arboreum_cottongen_reftransV1_0016361, g.arboreum_cottongen_reftransV1_0016361 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A0D2VPN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G205900 PE=4 SV=1) HSP 1 Score: 430.254 bits (1105), Expect = 2.020e-144 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGF TIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFGTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A0D2UVW3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G205900 PE=4 SV=1) HSP 1 Score: 429.869 bits (1104), Expect = 3.434e-144 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGF TIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFGTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A0D2UW96_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G205900 PE=4 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 6.829e-144 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGF TIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFGTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A0D2TB59_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G205900 PE=4 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 1.517e-143 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGF TIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFGTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A061FTE4_THECC (Sec23/Sec24 protein transport family protein isoform 2 OS=Theobroma cacao GN=TCM_045610 PE=4 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 8.680e-138 Identity = 198/208 (95.19%), Postives = 204/208 (98.08%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSA+YTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASS+PPVFMFV+DTSIIEEEMAFLKS+LSQAIGLLPDNSLVGLITFGTLVHVHELGF IPKTYVFKGSKDVSK+QLLEQM+FFL KPKP TGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAIYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSLPPVFMFVLDTSIIEEEMAFLKSSLSQAIGLLPDNSLVGLITFGTLVHVHELGFGAIPKTYVFKGSKDVSKDQLLEQMSFFLNKPKPTTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A061FTV4_THECC (Sec23/Sec24 protein transport family protein isoform 1 OS=Theobroma cacao GN=TCM_045610 PE=4 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 1.961e-134 Identity = 198/208 (95.19%), Postives = 204/208 (98.08%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSA+YTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASS+PPVFMFV+DTSIIEEEMAFLKS+LSQAIGLLPDNSLVGLITFGTLVHVHELGF IPKTYVFKGSKDVSK+QLLEQM+FFL KPKP TGVIAGARDGLSSESIARFL Sbjct: 22 GTKQEASNCVVPVSAIYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSLPPVFMFVLDTSIIEEEMAFLKSSLSQAIGLLPDNSLVGLITFGTLVHVHELGFGAIPKTYVFKGSKDVSKDQLLEQMSFFLNKPKPTTGVIAGARDGLSSESIARFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: B9SKJ9_RICCO (Protein transport protein sec23, putative OS=Ricinus communis GN=RCOM_0659690 PE=4 SV=1) HSP 1 Score: 392.119 bits (1006), Expect = 1.088e-128 Identity = 186/208 (89.42%), Postives = 195/208 (93.75%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 G+KQEASNCVVPVSA+YTPIKPFPNMPVLPYAPLRCR CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHY SISD+NLPAELFPQYTTIEY++PGE S VFMFVVDT IIEEEMAFLKSALSQAI LLPDNSLVGLITFGTLVHVHELGF IPKTYVF+GSKDVSK+QLL+QM FFL KPKPPTGVIAGARDGLSSESI+RFL Sbjct: 22 GSKQEASNCVVPVSAIYTPIKPFPNMPVLPYAPLRCRTCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYGSISDDNLPAELFPQYTTIEYETPGEKFSYSSVFMFVVDTCIIEEEMAFLKSALSQAIDLLPDNSLVGLITFGTLVHVHELGFGQIPKTYVFRGSKDVSKDQLLDQMGFFLKKPKPPTGVIAGARDGLSSESISRFL 229
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A0A0KD02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G078680 PE=4 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 3.424e-126 Identity = 181/209 (86.60%), Postives = 197/209 (94.26%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEA-SSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNC+VPVSA+YTPIK FPNMPVLPY+PLRCR CRS+LNPFSIVDFAAKIWICPFCFQRNHFPPHYASISD+NLPAELFPQYTTIEY+S GE S +PPVFMFV+DT IIEEE+AFLKSALSQA+ LLPDNSLVGL+T+GT VHVHELGF IPKT+VFKG+KDVSK+QLLEQMNFFL KPKPPTGVIAGARDGLS+ESIARFL Sbjct: 22 GTKQEASNCIVPVSALYTPIKAFPNMPVLPYSPLRCRTCRSILNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDDNLPAELFPQYTTIEYESTGETPSPVPPVFMFVLDTCIIEEEIAFLKSALSQAVDLLPDNSLVGLVTYGTFVHVHELGFGQIPKTFVFKGTKDVSKDQLLEQMNFFLKKPKPPTGVIAGARDGLSTESIARFL 230
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A067HBX3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004199mg PE=4 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 6.014e-123 Identity = 181/216 (83.80%), Postives = 195/216 (90.28%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFP----NMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQ--SPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELG--FNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSA+YTPIK FP +MP+LPYAPLRCR CRS+LNPFSIVDFAAKIWICPFCFQRNHFPPHYASI+D+NLPAELFPQYTTIEY+ PGE SS+PPVFMFVVDT IIEEEM+FLKSALSQAI LLPDNSLVGLITFGTLV VHELG IPKTYVFKGSKDVSK+QLLEQ+NFF+ KPKP TGVIAG RDGLSS++IARFL Sbjct: 22 GTKQEASNCVVPVSAIYTPIKAFPVNNNSMPILPYAPLRCRTCRSILNPFSIVDFAAKIWICPFCFQRNHFPPHYASITDDNLPAELFPQYTTIEYEPPGPGEKSSVPPVFMFVVDTCIIEEEMSFLKSALSQAIDLLPDNSLVGLITFGTLVQVHELGGFGQIIPKTYVFKGSKDVSKDQLLEQLNFFIKKPKPSTGVIAGVRDGLSSDTIARFL 237
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Match: A0A067HC62_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004199mg PE=4 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 1.690e-122 Identity = 181/216 (83.80%), Postives = 195/216 (90.28%), Query Frame = 1 Query: 1 GTKQEASNCVVPVSAVYTPIKPFP----NMPVLPYAPLRCRNCRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQ--SPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELG--FNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 GTKQEASNCVVPVSA+YTPIK FP +MP+LPYAPLRCR CRS+LNPFSIVDFAAKIWICPFCFQRNHFPPHYASI+D+NLPAELFPQYTTIEY+ PGE SS+PPVFMFVVDT IIEEEM+FLKSALSQAI LLPDNSLVGLITFGTLV VHELG IPKTYVFKGSKDVSK+QLLEQ+NFF+ KPKP TGVIAG RDGLSS++IARFL Sbjct: 22 GTKQEASNCVVPVSAIYTPIKAFPVNNNSMPILPYAPLRCRTCRSILNPFSIVDFAAKIWICPFCFQRNHFPPHYASITDDNLPAELFPQYTTIEYEPPGPGEKSSVPPVFMFVVDTCIIEEEMSFLKSALSQAIDLLPDNSLVGLITFGTLVQVHELGGFGQIIPKTYVFKGSKDVSKDQLLEQLNFFIKKPKPSTGVIAGVRDGLSSDTIARFL 237
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_COCIM (Protein transport protein SEC23 OS=Coccidioides immitis (strain RS) GN=SEC23 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.143e-57 Identity = 100/208 (48.08%), Postives = 134/208 (64.42%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKPPTGVIAGARDGLSSESIARFL 624 T+ EAS VVP+ A+YTP+K P+ P+L Y P+ C+ CR+VLNP++ VD A+IWICPFC QRN PPHY I++ +P EL PQ TTIEYQ A + PP+F+FVVDT E+ + +K +L ++ LLP N+LVGLITFGT+ VHELG+ K+YVFKGSKD + +Q+ E + + P R + ARFL Sbjct: 29 TRMEASRLVVPIGAIYTPLKERPDAPLLQYEPVTCKQPCRAVLNPYANVDIRARIWICPFCLQRNPLPPHYKDITENTIPPELHPQSTTIEYQLARPAPA-PPIFLFVVDTCQEEDGLKAVKDSLVMSLSLLPPNALVGLITFGTMAQVHELGYTECAKSYVFKGSKDYTPKQIQEMLGLLAPGLRAPAPQQQPGRPAPAVAPAARFL 235
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_USTMA (Protein transport protein SEC23 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SEC23 PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.378e-55 Identity = 87/180 (48.33%), Postives = 129/180 (71.67%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNF 540 +K EA+ VVP+SA+YTP+K ++P + Y P+ C+ CR+VLNP+ +D K+WICPFC RN FPPHY IS NLPAEL P+YTTIEY + + IPP+F++VVDT + ++++ L+ AL ++ LLP N+LVGLIT+GT+ VHELG++ PK+YVF+G+K+ + + + + + Sbjct: 22 SKIEATRTVVPISALYTPLKEREDLPPVLYEPVTCKPPCRAVLNPYCQIDVRGKLWICPFCLSRNAFPPHYKDISSTNLPAELLPKYTTIEY-TLSRPAQIPPIFLYVVDTCMDDDDLKALREALVVSLSLLPPNALVGLITYGTMAQVHELGYDACPKSYVFRGTKEYAPKAIQDMLGL 200
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_CHAGB (Protein transport protein SEC23 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=SEC23 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.364e-54 Identity = 92/185 (49.73%), Postives = 129/185 (69.73%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKP 555 T+ EAS VVP+ A+YTP+K P+ P+L + P+ C+ CRSVLNPF VD A++WICPFC RN PPHY I+ + +P EL P TTIEY+ A S PP+F++VVDT E+ +A LK +L ++ LLP+N+LVGLIT+GT+ VHE+G+ K+YVF+GSK+ + +Q+ E + LI+P Sbjct: 29 TRMEASRLVVPIGALYTPLKEKPDTPLLQFEPVTCKQPCRSVLNPFCQVDVRARLWICPFCLSRNPLPPHYKDITAQAIPPELHPSNTTIEYRLSRPAPS-PPIFLYVVDTCQEEDSLAALKESLIMSLSLLPENALVGLITYGTMAQVHEIGYTECAKSYVFRGSKEYAAKQVQEMLG--LIQP 210
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_ASPOR (Protein transport protein sec23 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=sec23 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 6.772e-54 Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKP 561 ++ EAS VVP+ AVYTP+K P+ P+L Y P+ C+ CR+VLNP++ VD A+IWICPFC RN PPHY I++ +P EL P TTIEYQ A + PP+F++VVDT E+ + LK L ++ LLP N+LVGLIT+GT+ VHELG+ K+YVF+GSK+ + +Q+ E + +P Sbjct: 29 SRMEASRLVVPIGAVYTPLKDKPDSPLLQYEPVTCKAPCRAVLNPYANVDVRARIWICPFCLMRNPLPPHYKDITESTIPPELHPLSTTIEYQLARPAPT-PPIFVYVVDTCQEEDSLKALKDTLVMSLSLLPANALVGLITYGTMAQVHELGYTECAKSYVFRGSKEYAAKQVQEMLGLLSAGVRP 214
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_MAGO7 (Protein transport protein SEC23 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=SEC23 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 2.036e-53 Identity = 89/187 (47.59%), Postives = 126/187 (67.38%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKP 561 T+ EAS VVP+ A+YTP+K P+ P+L + P+ C+ CRSVLNPF VD A++WICPFC RN PPHY I+ +P EL P TTIEY+ A S PP+F++VVDT ++ + LK +L ++ LLP+N+LVGLIT+GT+ VHE+G+ K+YVF+GSKD + +Q+ E + + +P Sbjct: 29 TRMEASRLVVPIGALYTPLKEKPDTPLLQFEPVTCKQPCRSVLNPFCQVDVRARLWICPFCLSRNPLPPHYKDITANAIPPELHPSNTTIEYRLSRPAPS-PPIFLYVVDTCQEDDSLNALKESLVMSLSLLPENALVGLITYGTMTQVHEIGYTECAKSYVFRGSKDYAPKQVQEMLGLGQMPVRP 214
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_ASPCL (Protein transport protein sec23 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=sec23 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 2.080e-53 Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKPKP 561 T+ EAS VVP++AVYTP+K P P+L Y P+ C+ CR+VLNP++ VD A+IWICPFC RN PPHY I++ +P EL PQ TTIEYQ A + PP+F++VVDT E+ + LK L ++ LLP N+LVGLITFGT+ VHELG+ K+YVF+GSKD + +Q+ E + P+P Sbjct: 29 TRMEASRLVVPIAAVYTPLKEKPESPLLQYEPVTCKAPCRAVLNPYANVDVRARIWICPFCLMRNPLPPHYKDITENAIPPELHPQSTTIEYQLARPAPA-PPIFVYVVDTCQEEDSLKALKDTLILSLSLLPPNALVGLITFGTMAQVHELGYTECAKSYVFRGSKDYAAKQVQEMLGLLAPGPRP 214
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_ASPNC (Protein transport protein sec23 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec23 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 2.877e-53 Identity = 88/180 (48.89%), Postives = 124/180 (68.89%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNF 540 ++ EAS VVP+ AVYTP+K P+ P+L Y P+ C+ CR+VLNP++ VD A+IWICPFC RN PPHY I++ +P EL P TTIEYQ A + PP+F++VVDT ++ + LK +L ++ LLP N+LVGLIT+GT+ VHELG+ K+YVF+GSK+ + +Q+ E + Sbjct: 29 SRMEASRLVVPIGAVYTPLKEKPDSPLLQYEPVTCKAPCRAVLNPYANVDVRARIWICPFCLMRNPLPPHYKDITESTIPPELHPMSTTIEYQLARPAPA-PPIFVYVVDTCQDDDSLKALKDSLIMSLSLLPVNALVGLITYGTMAQVHELGYTECAKSYVFRGSKEYAAKQVQEMLGL 207
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_NEUCR (Protein transport protein sec23 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sec23-1 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 4.119e-53 Identity = 88/185 (47.57%), Postives = 129/185 (69.73%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNFFLIKP 555 T+ EAS VVP+ A+YTP+K P+ P+L + P+ C+ CRSVLNP+ VD A++WICPFC RN PPHY I+ +P EL P TTIEY+ A + PP+F++VVDT E+ +A LK +L ++ LLP+++LVGLIT+GT+ VHE+G+ PK+YVF+G+K+ + +Q+ E + L++P Sbjct: 29 TRMEASRLVVPIGALYTPLKEKPDTPLLQFDPVSCKQPCRSVLNPYCQVDVRARLWICPFCLSRNPLPPHYKDITANAIPPELHPSNTTIEYRLSRPAPA-PPIFLYVVDTCQEEDSLAALKESLIMSLSLLPEHALVGLITYGTMAQVHEIGYTECPKSYVFRGNKEYAAKQVQEMLG--LVQP 210
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SC23A_MOUSE (Protein transport protein Sec23A OS=Mus musculus GN=Sec23a PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 4.468e-53 Identity = 88/181 (48.62%), Postives = 126/181 (69.61%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN--CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNF 540 ++ EA+ VVPV+A++TP+K P++P + Y P+ C CR+VLNP VD+ AK+W C FC+QRN FPP YA IS+ N PAEL PQ+++IEY +P +F++VVDT I +E++ LK ++ ++ LLP +LVGLITFG +V VHELG I K+YVF+G+KD+S +QL E + Sbjct: 27 SRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYVVL-RGPQMPLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGL 206
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Match: SEC23_YARLI (Protein transport protein SEC23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC23 PE=3 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 5.201e-53 Identity = 88/180 (48.89%), Postives = 121/180 (67.22%), Query Frame = 1 Query: 4 TKQEASNCVVPVSAVYTPIKPFPNMPVLPYAPLRCRN-CRSVLNPFSIVDFAAKIWICPFCFQRNHFPPHYASISDENLPAELFPQYTTIEYQSPGEASSIPPVFMFVVDTSIIEEEMAFLKSALSQAIGLLPDNSLVGLITFGTLVHVHELGFNTIPKTYVFKGSKDVSKEQLLEQMNF 540 T+ EAS VVP+SA+YTP+K PN+PVL Y P+ CR CR+VLN F VD A+ W+CPFC RN PP Y I+ ENLP EL P+ TT+EY A + P+F+FVVDT + E + LK L + L+P+N+LVGLITFG + VHE+G+ K++VF+G++D + +Q+ EQ+ Sbjct: 22 TRIEASRTVVPISALYTPLKEKPNLPVLQYEPIACRPPCRAVLNSFCQVDLRARAWVCPFCLSRNQLPPQYRDITPENLPHELRPECTTVEYVLSRPAPN--PIFLFVVDTCLDAENLTALKDHLVATLSLIPENALVGLITFGAMAQVHEIGYRECGKSFVFRGNRDYTAKQVQEQLGL 199 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to top
BLAST of g.arboreum_cottongen_reftransV1_0016361 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0016361 ID=g.arboreum_cottongen_reftransV1_0016361; Name=g.arboreum_cottongen_reftransV1_0016361; organism=Gossypium arboreum; type=contig; length=624bpback to top Annotated Terms
The
following terms have been associated with
this contig:
|