g.arboreum_cottongen_reftransV1_0015403, g.arboreum_cottongen_reftransV1_0015403 (contig) Gossypium arboreum
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Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: M5X1W3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004744mg PE=4 SV=1) HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0 Identity = 385/490 (78.57%), Postives = 430/490 (87.76%), Query Frame = -3
Query: 310 ADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSE 1779
A+R R SI+DLPS L++EIL++G RLSA+DL+ LELTSRTFGG HG+YP K SLVD AA+QLC+++ +Y M ++QR +F+RC G WKR+LRFLQSVEQSSDMV+TSAGNMQITTGRYHTLLI NSS+YSCGSSLCGVLG+GPET QCV FTRINFPS A V+QVSAS NHAAFV+QSGEVFTCGDNSSFCCGH+DT RPIFRPRLVEA+KG+PCKQVA GLNFTVFLTRQG VYTCG NTHGQLG GDT D P PK +EL E +G +VQIAAGPSYVL V DNGVVYSFGSGS+FCLGHGEQ +EFQPRAIQTFKRKG+HV+RVSAGDEH VA+DSSGYVYTWGKGYCG LGHGDEIDKT PE L LK LAVQVCARKRKTFVL D G+VYG GWMGFGSLGFPDRGVSDKI+ PR+LD LR H VSQ+STGLYHTVVVT+RG++FGFGDNERAQLGHDTLRGCLEPTEIFI EM D+ ++ E
Sbjct: 3 AERYRPVSIEDLPSQLVIEILSSG-RLSAIDLLHLELTSRTFGGSHGLYPHKFGSLVDYAAYQLCVSHSVYGKMERNAQRGLFDRCGGKWKRVLRFLQSVEQSSDMVETSAGNMQITTGRYHTLLISNSSLYSCGSSLCGVLGNGPETKQCVTFTRINFPSPAQVVQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKGLPCKQVATGLNFTVFLTRQGHVYTCGANTHGQLGQGDTIDSPAPKMIELPEGIGYIVQIAAGPSYVLAVADNGVVYSFGSGSHFCLGHGEQHDEFQPRAIQTFKRKGIHVVRVSAGDEHAVALDSSGYVYTWGKGYCGALGHGDEIDKTTPELLNKLKSHLAVQVCARKRKTFVLGDNGSVYGCGWMGFGSLGFPDRGVSDKILSPRILDSLRAHHVSQISTGLYHTVVVTNRGKLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMADDVDIVPE 491
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: B9N1J6_POPTR (Regulator of chromosome condensation family protein OS=Populus trichocarpa GN=POPTR_0001s41320g PE=4 SV=1) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 381/493 (77.28%), Postives = 432/493 (87.63%), Query Frame = -3
Query: 304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
MA+R RL SI+D PSHLI EILT G RLSA DLV LELTSRTFG HG+YP K RSLVD AA QLC+++ +Y GM ++Q+++F+RC GNWKR+LRFLQ+VE+SS MV+TSA NMQ+TTGRYHTLLIR+SSVYSCGSSLCGVLGHG ETTQCVAFTRI FPSLANV+QVSAS NHAAFVLQSGEVFTCGDNSSFCCGH+DT RPIFRPRLVEA+K + CKQV+ GLNFTVFLTRQG +YTCG+NTHGQLGHGDT DRPTPK +ELLE +G VVQIAAGPSYVL VTDNGVVYSFG GSNFCLGHGEQ +EFQPRAIQTF+RK +HV+ VSAGDEH VA+DSSG+VY+WGKGYCG LGHGDEIDKTLP + LK +LAVQ CARKRKTFVLVD G+VYGFG MGFGSLGFPDR +++K+M PR+LD LR HRVSQ+STGLYHTVVVT++G+MFGFGDNER QLGHDTLRGCL+PTEIF+ E D+ L E +
Sbjct: 1 MANRYRLASIEDFPSHLIFEILTIG-RLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFAAHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACNMQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIFVQETADDTGLTLERK 492
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: E0CSN3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03080 PE=4 SV=1) HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0 Identity = 384/493 (77.89%), Postives = 433/493 (87.83%), Query Frame = -3
Query: 304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
MA+R S ++LPSHLILEIL++G RLSAVDLV LELTSRTFG HG+YP K RSLVD AAFQLC ++ IY +S ++Q+D+F+RC NWKR+LRFLQSVEQSS + +TSAGNMQITTGRYHTLLI++SSVYSCGSSLCGVLGHGPETTQCVAF+RINFP LA+V QVSAS NHAAFV+QSGEVFTCGDNSSFCCGH DT RPIFRPRLVEA+KG+PCKQVAAGL+FTVFLT +G VYTCGTNTHGQLGHGDT DR TPK VELLE VG VVQIAAGPSY + VTD+G V+SFGSGSNFCLGHGEQ NE +PRAIQ+F+RK +HV+R+SAGDEHVVA+DSSG+VYTWGKGYCG LGHGDEIDKT PE L SLK LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRG SDK+MRP +LD LR H +SQ+STGLYHTV V ++G++FGFGDNERAQLGHDTLRGC PTEIF+ E D+A +SESR
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSG-RLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFVQEATDDAGRVSESR 492
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A5AMV7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023540 PE=4 SV=1) HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0 Identity = 380/489 (77.71%), Postives = 428/489 (87.53%), Query Frame = -3
Query: 328 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF----IHEMEDE 1782
MA+R S ++LPSHLILEIL++G RLSAVDLV LELTSRTFG HG+YP K RSLVD AAFQLC ++ IY +S ++Q+D+F+RC NWKR+LRFLQSVEQSS + +TSAGNMQITTGRYHTLLI++SSVYSCGSSLCGVLGHGPETTQCVAF+RINFP LA+V QVSAS NHAAFV+QSGEVFTCGDNSSFCCGH DT RPIFRPRLVEA+KG+PCKQVAAGL+FTVFLT +G VYTCGTNTHGQLGHGDT DR TPK VELLE VG VVQIAAGPSY + VTD+G V+SFGSGSNFCLGHGEQ NE +PRAIQ+F+RK +HV+R+SAGDEHVVA+DSSG+VYTWGKGYCG LGHGDEIDKT PE L SLK LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRG SDK+MRP +LD LR H +SQ+STGLYHTV V ++G++FGFGDNERAQLGHDTLRGC PTEIF + EME +
Sbjct: 1 MANRYWSVSFEELPSHLILEILSSG-RLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFASPTVAEMERD 488
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: V7BUA6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G083200g PE=4 SV=1) HSP 1 Score: 783.867 bits (2023), Expect = 0.000e+0 Identity = 372/478 (77.82%), Postives = 425/478 (88.91%), Query Frame = -3
Query: 349 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF 1782
M DR R FSI++LPSHL+L+IL +G RLSA+DLV LELTS+TFGG HG+YP K +SL+D AAFQLC ++ Y GMS SQR++++RC GNWKR+LRFLQSVEQSS MV+TS+GNMQITTG+YHTLLI N+SVYSCGS LCGVLGHG E TQCVAFTRINFP LA V+ VSAS NHAAFVLQSGEVFTCGDNS+ CCGHRDT RPI RPRLVE++KGIPCKQVAAGLNFTVFLTRQG VYTCGTNTHGQLGHGDTQDRPTPK +E+L GSVVQIAAGPSY+L+VT+NG VYSFGSG+NFCLGHGEQ NEFQPRA+Q F+RKG+H++RVSAGDEH VA+DS+G+VYTWGKGYCG LGHGDEI+KT PE L SLK QLAVQVCARKRKTFVL+D G VYGFG MGFGSLGF DR V DK+++PR+LD L++H VSQ+STGL+HTVV+T RG++FGFGDNERAQLGHDTLR CLEPT+IF
Sbjct: 1 MGDRCRHFSIEELPSHLVLDILCSG-RLSAMDLVCLELTSKTFGGIHGLYPFKFKSLIDFAAFQLCASHVTYAGMSLISQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNASVYSCGSCLCGVLGHGSEITQCVAFTRINFPPLARVVHVSASFNHAAFVLQSGEVFTCGDNSASCCGHRDTSRPISRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL---GSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHNEFQPRAVQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPEMLTSLKNQLAVQVCARKRKTFVLIDSGLVYGFGSMGFGSLGFLDRRVLDKVLKPRILDTLKSHHVSQISTGLFHTVVITSRGKIFGFGDNERAQLGHDTLRSCLEPTQIF 474
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: I1M3A9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 781.556 bits (2017), Expect = 0.000e+0 Identity = 373/485 (76.91%), Postives = 427/485 (88.04%), Query Frame = -3
Query: 328 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDE 1782
M +R R FSI++LPSHL+LEIL +G RLSA+DLV LELTS+TFGG HG++P K +SLV AAFQLC ++ Y M +SQR++++RC GNWKR+LRFLQSVEQSS MV+TS+GNMQITTG+YHTLLI NSSVYSCGS LCGVLG G ETTQCVAFTRI+FP LA V+ VSAS NHAAFV+QSGEVFTCGDNSS CCGHRDT RPIFRPRLVE++KGIPCKQVAAGLNFTVFLTR+G VYTCGTNTHGQLGHGDTQDRPTPK +E+L SVVQIAAGPSY+L+VT+NG VYSFGSG+NFCLGHGEQ +E QPRAIQ F+RKG+H++RVSAGDEH VA+DS+GYVYTWGKGYCG LGHGDEI+KT PE L SLK QL VQVCARKRKTFVLVD G+VYGFG MGFGSLGF DR VSDK+++PR+LD LR H VSQ+STGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPTEIFI ++ ++
Sbjct: 1 MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS---SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIFIKDVSED 481
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A0B2RWI9_GLYSO (Putative E3 ubiquitin-protein ligase HERC3 OS=Glycine soja GN=glysoja_001534 PE=4 SV=1) HSP 1 Score: 781.556 bits (2017), Expect = 0.000e+0 Identity = 373/485 (76.91%), Postives = 427/485 (88.04%), Query Frame = -3
Query: 328 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDE 1782
M +R R FSI++LPSHL+LEIL +G RLSA+DLV LELTS+TFGG HG++P K +SLV AAFQLC ++ Y M +SQR++++RC GNWKR+LRFLQSVEQSS MV+TS+GNMQITTG+YHTLLI NSSVYSCGS LCGVLG G ETTQCVAFTRI+FP LA V+ VSAS NHAAFV+QSGEVFTCGDNSS CCGHRDT RPIFRPRLVE++KGIPCKQVAAGLNFTVFLTR+G VYTCGTNTHGQLGHGDTQDRPTPK +E+L SVVQIAAGPSY+L+VT+NG VYSFGSG+NFCLGHGEQ +E QPRAIQ F+RKG+H++RVSAGDEH VA+DS+GYVYTWGKGYCG LGHGDEI+KT PE L SLK QL VQVCARKRKTFVLVD G+VYGFG MGFGSLGF DR VSDK+++PR+LD LR H VSQ+STGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPTEIFI ++ ++
Sbjct: 1 MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS---SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIFIKDVSED 481
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: C6TLE5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 774.622 bits (1999), Expect = 0.000e+0 Identity = 370/485 (76.29%), Postives = 425/485 (87.63%), Query Frame = -3
Query: 328 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDE 1782
M +R R FSI++LPSHL+LEIL +G RLSA+DLV LELTS+TFGG HG++P K +SLV AAFQLC ++ Y M +SQR++++RC GNWKR+LRFLQSVEQSS MV+TS+GNMQITTG+YHTLLI NSSVYSCGS LCGVLG G ETTQCVAFTRI+FP LA V+ VSAS NHAAFV+QSGEVFTCGDNSS CCGHRDT RPIF+PRLVE++KGIPCKQVAAGLNFTVFLTR+G VYTCGTNTHGQLGHGDTQDRPTPK +E+L SVVQIAAGPSY+L+VT+NG VYSFGSG+NFCLGHGEQ +E QPRAIQ F+RKG+H++RVSAGDEH VA+DS+GYVYTWGKGYCG LGHGDEI+KT PE L SLK QL VQVCARKRKTFVLVD G+VYGFG MGFGSLGF DR VS K+++PR+LD LR H VSQ+STGLYHTVV+T RG++FGFGDNERAQLGHD LR CLEPTEIFI ++ ++
Sbjct: 1 MGERCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS---SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEIFIKDVFED 481
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: V4NPF1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10020606mg PE=4 SV=1) HSP 1 Score: 773.852 bits (1997), Expect = 0.000e+0 Identity = 367/480 (76.46%), Postives = 417/480 (86.88%), Query Frame = -3
Query: 343 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIH 1782
MA+R+ L S +DLPSHLILE+LT+G RL+AVDL+SLELTS+ FGG +G P K RSL D AA QLC + +Y+GM ++Q+++F C+GNWKRLLRFLQSVEQSSDMV+TSAGNMQITTGRYHTLLI NS VYSCGSSL GVL HGPETTQCVAFT I FP A V QVSA+QNH+AFVLQSGEV TCGDNSS CCGH DT RPIFRP+LVEA+KG PCKQVAAGL+FT FL+R+G V+TCG+NTHGQLGHGDT DRP PK VELL+ +G VVQIA GPSYVL VT +G VYSFGSGSNFCLGHGEQQ+E QPR IQ FKRKG+H+LRVSAGDEH VA+DS+G VYTWGKGYCG LGHGDE DK P+ L+SLK LAVQVCARKRKTFVLV+GG +YGFGWMGFGSLGFPDRGVSDK+++PR+L+ L+ HRVSQVSTGLYHT+VVT GR+FGFGDNERAQLGHD+LRGCLEPTEIF+H
Sbjct: 1 MAERNWLISFEDLPSHLILEVLTSG-RLNAVDLLSLELTSKVFGGSYGFSPLKFRSLADYAASQLCSVHPVYVGMGLTTQKELFANCEGNWKRLLRFLQSVEQSSDMVETSAGNMQITTGRYHTLLINNSKVYSCGSSLSGVLAHGPETTQCVAFTPIGFPFSAQVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTAFLSREGRVFTCGSNTHGQLGHGDTLDRPVPKAVELLQSIGPVVQIATGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVSLKNCLAVQVCARKRKTFVLVEGGILYGFGWMGFGSLGFPDRGVSDKVLKPRVLESLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHDSLRGCLEPTEIFLH 479
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: I1LUZ0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 772.696 bits (1994), Expect = 0.000e+0 Identity = 370/485 (76.29%), Postives = 424/485 (87.42%), Query Frame = -3
Query: 328 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDE 1782
M DR R FSI++LPSHL+LEIL +G RLSA+DLV LELTS+TFGG HG++P K +SLVD AAFQLC ++ + M +SQR++++RC GNWKR+LRFLQSVEQSS MV+TS GNMQITTG+YHTLLI NSSVYSCGS LCGVLG G ETTQCVAFTRI+ P L V+ VSAS NHAAFV+QSGEVFTCGDNSS CCGHRDT RPIFRPRLVE++KGIPCKQVAAGLNFTVFLTRQG VYTCGTNTHGQLGHGDTQDRPTPK +E+L SVVQIAAGPSY+L+VT+NG VYSFGSG+NFCLGHGEQ +E QPR IQ F+RKG+H++RVSAGDEH VA+DS+G+VYTWGKGYCG LGHGDEI+KT PE L SLK QLAVQVCARKRKTFVLV+ G+VYGFG MGFGSLGF DR VSDK+++PR+LD LR H VSQ+STGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPT+IFI + ++
Sbjct: 1 MGDRCRHFSIEELPSHLVLEILCSG-RLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFAAFQLCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS---SVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQIFIKDTSED 481
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.300e-41 Identity = 105/302 (34.77%), Postives = 158/302 (52.32%), Query Frame = -3
Query: 391 NVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDT-GRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGL-VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1290
V+ +SA +H+ +L V + G GH D RP P + A+ G V G + TV ++ G+ VY+ G G+LGHG++ D TP ++ L + + QIA G S+ L VT G V S+G N LG G+ ++ P+ IQ F+ G+ + V+AG EH AV G +Y WG G G LG GD D+ +PE + S G+ V R T + GA+Y +GW +G LG D + D ++ P L+ L N +SQ+S G HT+ +T G+++G+G N+ Q+G
Sbjct: 16 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP--SPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFE--GIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGD--LEDHLI-PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 309 HSP 2 Score: 156.377 bits (394), Expect = 3.700e-40 Identity = 112/355 (31.55%), Postives = 173/355 (48.73%), Query Frame = -3
Query: 391 ITTGRYHTL-LIRNSSVYSCGSSLCGVLGHG-----PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSG-EVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1434
I+ G H++ L+ V S G G LGHG P TQ A ++ V+ +H QSG EV++ G GH ++ +F P ++A+ GI KQ+A G + + +T +G V + G N +GQLG GDT+D P+ ++ E + + +AAG + VT++G +Y +G G LG G++ + P + + G + V+ G H ++V SG +YT+G G+LGHGD D +P L +L Q+ R T L G +YG+GW FG +G + ++ R D + +V QVS G HT+ VT R +F +G QLG
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDG------HQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS-SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD---DQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361 HSP 3 Score: 139.043 bits (349), Expect = 3.470e-34 Identity = 81/257 (31.52%), Postives = 139/257 (54.09%), Query Frame = -3
Query: 352 VAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGV-VYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1119
++AG + +V L +V + G GQLGHGD +DRP+P + L+ +V + G + + + +G+ VYS+G G LGHG + F P I+ G+ + +++ GD H +AV G V +WG+ G+LG GD D +P+ + + +G V A T + + G +YG+GW +G+LG DR +D+++ P + ++S V+ G HT+ V++ G ++ +G ++ QLGH L L P ++
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--TDRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270 HSP 4 Score: 113.62 bits (283), Expect = 1.390e-25 Identity = 94/323 (29.10%), Postives = 149/323 (46.13%), Query Frame = -3
Query: 499 MQITTGRYHTLLIRNS--SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSL--ANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGS-----VVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCL 1440
+ +T G HT+ S VYS G G LGHG + FT + +L + Q++ +H V GEV + G N + G DT + P+ ++A +GI K VAAG T +T G +Y G +G LG GD DR P ERV S + +A G + ++V+ +G +Y++G LGHG+ ++ P ++ + ++S G H +A+ S G +Y WG G++G G+ +D+ P + Q VQV R T + + V+ +G G LG G S P++++ L
Sbjct: 70 VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD---LFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP------ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS--FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI---GESVDRNFPKIIEAL 377 HSP 5 Score: 74.7146 bits (182), Expect = 8.456e-13 Identity = 59/209 (28.23%), Postives = 93/209 (44.50%), Query Frame = -3
Query: 811 ITTGRYHTLLI-RNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGV 1434
+ G HT + + +Y G G LG G T + V R+ + V+ H V SG ++T G + GH D + P +EA+ Q++ G T+ LT G +Y G N GQ+G G+ D+ +P V + VVQ++ G + L VT+ V+++G G+N LG GE + P+ I+ G
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ-KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGA 382
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 9.796e-36 Identity = 99/301 (32.89%), Postives = 152/301 (50.50%), Query Frame = -3
Query: 349 FCCGHRDTGRP---------IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGS-----VVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ-PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEI-DKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF 1203
C G+ G+P + P++ + K+VA G N +VFL G VYTCG NT GQLGH ++P E++G+ ++ +A G S+ L ++D G ++S+G+GS+ LG ++ PR IQ ++ + L+VS G+ H +A+ + G +TWGK G+LG G E + P+ + SL+G QV A +F L GAV+G+G G LG D + P + LR +V +S G HT V+T G +F FG QLGHD++ + P +
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289 HSP 2 Score: 130.954 bits (328), Expect = 2.801e-30 Identity = 93/308 (30.19%), Postives = 164/308 (53.25%), Query Frame = -3
Query: 391 FPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDR-PTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQ-QNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVV-VTHRGRMFGFGDNERAQLG 1305
F S +V +V+ NH+ F+L+ GEV+TCG N+ GH G +P + A+ VA G + ++ L+ +G +++ G + GQLG T+D P+ ++ L + +++Q++ G + L + +G +++G S+ LG G++ ++ P+ +++ + G+ + +V+AG H A+ SG V+ WG G+LG DE D+ P H+ L+ Q V + + T VL G V+ FG G LG ++D++ R+L+ L V+Q++ G HT+ V G ++ FG R QLG
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN---KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLE--GIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLG--HDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328 HSP 3 Score: 119.783 bits (299), Expect = 1.165e-26 Identity = 82/292 (28.08%), Postives = 145/292 (49.66%), Query Frame = -3
Query: 556 GRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQV-CARKRKTFVLVDGGAVYGFGWMGFGSLG 1425
G + L+ + VY+CG + G LGH E + +I + ++I V+ ++H+ + G++F+ G S G T + PRL++ + QV+ G + L G +T G N+HGQLG G + + +P+ V LE + + Q+AAG ++ ++ +G V+ +G + LG ++++ P ++ + + V+ +S G+EH + SG V+T+G G CG+LGH D+ P ++ L G Q+ C R+ + G +Y FG G LG
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328 HSP 4 Score: 109.768 bits (273), Expect = 1.814e-23 Identity = 88/276 (31.88%), Postives = 134/276 (48.55%), Query Frame = -3
Query: 622 MQITTGRYHTLLIRN-SSVYSCGSSLCGVLGHGPETTQCVAFTR-INFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVA-VDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRK 1440
+ + G H+L + + ++S G+ G LG T VA R I + ++QVS H + G+ FT G NS G P+ V +++GIP QVAAG + L+ G V+ G N GQLG D +DR +P V+LL R VV I+ G + +T +G V++FG+GS LGH +E PR + + G V +++ G +H +A V SSG +Y +G G G+LG G + P + + Q+ AR +
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 358
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.279e-32 Identity = 92/276 (33.33%), Postives = 145/276 (52.54%), Query Frame = -3
Query: 349 IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLG-HGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDK-TLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF 1170
+ PR + + V GL TVF+ G VYTCG N GQLGH + R P+ V L+ ++V ++ G ++ L + D G VY++G S+ LG G ++ PR I++ + +++V+ G H +A+ + V+ WG+ G+LG G E K T P+ + SL G +QV A +FVL GA++G+G FG LG D +D+ + P LL LR+ ++ + G HT +T G +F FG QLGH++ + P ++F
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS--DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289 HSP 2 Score: 124.02 bits (310), Expect = 5.579e-28 Identity = 92/293 (31.40%), Postives = 142/293 (48.46%), Query Frame = -3
Query: 391 HAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLG-HGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHG-EQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHT-VVVTHRGRMFGFGDNERAQLG 1260
H FVL G V+TCG N GH + + +P V A+ V+ G T+ L +G VY G ++ GQLG G + P+ ++ L + +VQ+A G + L ++ V+ +G LG G E Q + P+ I++ G+ ++V+AG H + SG ++ WG+ G+LG DE D+ +P L SL+ Q V +C + T L G V+ FG G+G LG + + PR + L V+Q++ G HT V GR++ FG QLG
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 3 Score: 114.005 bits (284), Expect = 7.899e-25 Identity = 77/294 (26.19%), Postives = 146/294 (49.66%), Query Frame = -3
Query: 556 RYHTLLIRNSSVYSCGSSLCGVLGHG---PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQV-CARKRKTFVLVDGGAVYGFGWMGFGSLG 1422
R+ ++ + +VY+CG + G LGH + Q VA N++ VS + H + G+V+ G +S G + + I PR ++++ I QVA G ++ L++ V+ G N +GQLG G + Q + +P+ ++ L + +Q+AAG ++ +T +G ++ +G LG ++ + + P +++ + + ++ + G++H A+ G V+T+G G G+LGH + P + L G + Q+ C R+ + + G +Y FG G G LG
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVAL------DAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 4 Score: 112.079 bits (279), Expect = 3.639e-24 Identity = 88/275 (32.00%), Postives = 139/275 (50.55%), Query Frame = -3
Query: 682 QSVEQSSDMVQTSAGNM-QITTGRYHTLLIRNS-SVYSCGSSLCGVLG-HGPETTQCVAFTRINFPSLANV--IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVA-VDSSGYVYTWGKGYCGELGHGDEIDKTLP 1488
+S ++ +V A N+ ++ G HTL + + VY+ G G LG G E +C+ R N SL+++ +QV+ H+ + ++ EVF G N G + P+L++++ GIP QVAAG + LT G ++ G N GQLG D DR P ++ L R +V I G + +T G V++FG+G LGH +E PR + F+ G V +++ G +H A V SSG +Y++G G G+LG G ++ P
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPR-NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338 HSP 5 Score: 78.5666 bits (192), Expect = 9.858e-14 Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = -3
Query: 832 MQITTGRYHTL-LIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVV-QIAAGPSYVLT-VTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQ 1440
+Q+ G YH+L L + S V+ G + G LG G E + + I +QV+A H+ + SG +F G N G D + P L+++++ + G + T LT++G V+T G +GQLGH T P+ V E +GS+V QIA G + V +G +YSFG G N LG G N P ++
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342 HSP 6 Score: 61.6178 bits (148), Expect = 1.531e-8 Identity = 58/219 (26.48%), Postives = 101/219 (46.12%), Query Frame = -3
Query: 991 PTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSS-DMVQTSAG--NMQITTGRYHTLLIRNS-SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFT-VFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVE 1632
P +SL D+ Q+ G Y ++ S ++F + +L ++ +Q+S ++++ G MQ+ G H+ ++ S +++ G + G LG E + V + S ++ + ++H A + + G VFT G GH T I PR V + G Q+A G T F+ G +Y+ G +GQLG G T +R +P TV+
Sbjct: 128 PRNIKSLSDIQIVQVAC--GYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 2.320e-32 Identity = 92/276 (33.33%), Postives = 145/276 (52.54%), Query Frame = -3
Query: 349 IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLG-HGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDK-TLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF 1170
+ PR + + V GL TVF+ G VYTCG N GQLGH + R P+ V L+ ++V +A G ++ L + D G VY++G S+ LG G ++ PR I++ + +++V+ G H +A+ + V+ WG+ G+LG G + K T P+ + SL G +QV A +FVL GA++G+G FG LG D +D+ + P LL LR+ ++ + G HT +T G +F FG QLGH++ + P ++F
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS--DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289 HSP 2 Score: 124.405 bits (311), Expect = 4.010e-28 Identity = 97/311 (31.19%), Postives = 147/311 (47.27%), Query Frame = -3
Query: 391 RINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLG-HGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHG-EQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHT-VVVTHRGRMFGFGDNERAQLG 1314
R +F V V H FVL G V+TCG N GH + + +P V A+ VA G T+ L +G VY G ++ GQLG G + P+ ++ L + +VQ+A G + L ++ V+ +G LG G + Q + P+ I++ G+ ++V+AG H + SG ++ WG+ G+LG DE D+ +P L SL+ Q V +C + T L G V+ FG G+G LG + + PR + L V+QV+ G HT V GR++ FG QLG
Sbjct: 27 RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 3 Score: 115.161 bits (287), Expect = 3.135e-25 Identity = 78/294 (26.53%), Postives = 146/294 (49.66%), Query Frame = -3
Query: 556 RYHTLLIRNSSVYSCGSSLCGVLGHG---PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQV-CARKRKTFVLVDGGAVYGFGWMGFGSLG 1422
R+ ++ + +VY+CG + G LGH + Q VA N++ V+ + H + G+V+ G +S G + + I PR ++++ I QVA G ++ L++ V+ G N +GQLG G D Q + +P+ ++ L + +Q+AAG ++ +T +G ++ +G LG ++ + + P +++ + + ++ + G++H A+ G V+T+G G G+LGH + P + L G + QV C R+ + + G +Y FG G G LG
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVAL------DAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 4 Score: 111.694 bits (278), Expect = 3.973e-24 Identity = 89/275 (32.36%), Postives = 138/275 (50.18%), Query Frame = -3
Query: 682 QSVEQSSDMVQTSAGNM-QITTGRYHTLLIRNS-SVYSCGSSLCGVLG-HGPETTQCVAFTRINFPSLANV--IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVA-VDSSGYVYTWGKGYCGELGHGDEIDKTLP 1488
+S ++ +V A N+ + G HTL + + VY+ G G LG G E +C+ R N SL+++ +QV+ H+ + ++ EVF G N G + P+L++++ GIP QVAAG + LT G ++ G N GQLG D DR P ++ L R +V I G + +T G V++FG+G LGH +E PR + F+ G V +V+ G +H A V SSG +Y++G G G+LG G ++ P
Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPR-NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338 HSP 5 Score: 76.6406 bits (187), Expect = 4.264e-13 Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = -3
Query: 832 MQITTGRYHTL-LIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVV-QIAAGPSYVLT-VTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQ 1440
+Q+ G YH+L L + S V+ G + G LG G + + + I +QV+A H+ + SG +F G N G D + P L+++++ + G + T LT++G V+T G +GQLGH T P+ V E +GS+V Q+A G + V +G +YSFG G N LG G N P ++
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342 HSP 6 Score: 61.2326 bits (147), Expect = 2.233e-8 Identity = 59/219 (26.94%), Postives = 100/219 (45.66%), Query Frame = -3
Query: 991 PTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSS-DMVQTSAG--NMQITTGRYHTLLIRNS-SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFT-VFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVE 1632
P +SL D+ Q+ G Y ++ S ++F + +L + +Q+S ++++ G MQ+ G H+ ++ S +++ G + G LG E + V + S ++ + ++H A + + G VFT G GH T I PR V + G QVA G T F+ G +Y+ G +GQLG G T +R +P TV+
Sbjct: 128 PRNIKSLSDIQIVQVAC--GYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 8.287e-32 Identity = 97/298 (32.55%), Postives = 150/298 (50.34%), Query Frame = -3
Query: 448 INFPSLANVIQ--------VSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIA--AGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVV 1311
++ P+L IQ V++ H + GEV++ G+ GH + P RPR++E+++GI VAAG + +T G +YT G +G+LGH D++D+ PK VE L+ VV IA +G + L +TD+ V+S+G G LG G P I + G+ V++V G + VA+ SG VYTWGKG LGHG + P + L+G+ + + + G VY +G G LG G ++ I RPRL+ L+ +V++V+ G HT+
Sbjct: 4025 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315 HSP 2 Score: 129.028 bits (323), Expect = 2.042e-29 Identity = 90/330 (27.27%), Postives = 161/330 (48.79%), Query Frame = -3
Query: 358 TRINFPSLA------NVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAG--DEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPT 1317
++I PS + NV+QV+ V G+V+ CG+ ++ G + + PR + A+ K+VA +G LT G V++ G G+LGH + P+ +E L + + IA G S+ +T +G +Y++G G LGHG+ + +P+ ++ G V++V+ G D +A+ G V++WG G G+LG G +P+++ L GQ Q+ + + L G V+ +G + LG G + +P++++ LR ++ V+ G H + VT G+++ +GDN+ Q G+ T +PT
Sbjct: 2978 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3301 HSP 3 Score: 125.561 bits (314), Expect = 2.678e-28 Identity = 81/269 (30.11%), Postives = 136/269 (50.56%), Query Frame = -3
Query: 361 PRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEP 1161
P L+E+++ + K+VA +G + L+ +G VY+ G G+LGHG+ P+ +E L + VV +AAG ++ VT G +Y++G G LGH + +++ +P+ ++ + V + +GD + + V++WG G G+LG G +P + SL G V+V + + L GAVY +G + LG G D + RPR + L+ +V ++TG H V T G ++ +GDN+ QLG T P
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292 HSP 4 Score: 124.79 bits (312), Expect = 3.826e-28 Identity = 87/268 (32.46%), Postives = 133/268 (49.63%), Query Frame = -3
Query: 388 GRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDR-PTPKTVELLER-VGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC--ARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH 1179
G I P E + + QVA G +T +G VY CG T+G+LG G + P P+ + L V V + +G + +T +G V+S+G G + LGH + N +PR I+ K K + ++ G H A+ SSG +YTWG G G LGHGD + P+ + L G +QV +R +T L D G V+ +G FG LG RG S+ P+ ++ L V Q+ G ++ +T G ++ +G + +LGH
Sbjct: 2977 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK--RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239 HSP 5 Score: 115.546 bits (288), Expect = 3.577e-25 Identity = 80/269 (29.74%), Postives = 133/269 (49.44%), Query Frame = -3
Query: 382 IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPS--YVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTF--KRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC--ARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDT 1170
+ P E + + Q+A + L+R G VYT N+ D P+ V+ L ++V+IAA + L + G VYS+G G LGHG+ +P+ I F K+ G HV+ ++ G + A+ + G +YTWG+G G LGHG D+ +P + LKG + V + +T + + G V+ +G +G LG RG SD P+L++ L++ V +V G ++ +T G+++ +G + +LGH T
Sbjct: 439 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693 HSP 6 Score: 111.694 bits (278), Expect = 5.686e-24 Identity = 94/316 (29.75%), Postives = 152/316 (48.10%), Query Frame = -3
Query: 376 LAN--VIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN--FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGS-VVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVS--AGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLR 1296
LAN V Q++ ++ + ++G V+T NS DT P+LV+ + ++AA + + L G VY+ G G+LGHGDT PK + ++ G VV IA G +Y +T G +Y++G G+ LGHG ++E P + K G+ V+ V+ +GD +AV +G V++WG G G+LG G P+ + L+ V+V + + L G VY +G LG G + + P+LL+ L+ +V V+ G H + +T + +G N++ Q DTLR
Sbjct: 448 LANLGVTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK--GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLR 746 HSP 7 Score: 110.923 bits (276), Expect = 1.183e-23 Identity = 85/273 (31.14%), Postives = 135/273 (49.45%), Query Frame = -3
Query: 637 GRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRIN--FPSLANVIQ------VSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN--FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC 1425
GR+ T L + V+S G G LGH F+R+N P L ++ ++ +H+A + SGE++T G GH D + +P++V+ + G QVA G T+ LT +GLV++ G G+LG G ++ P+ +E L G V QI G + L +T +GVV+++G G F LGHG + +P+ ++ + G ++ V+ G H +AV SG VY WG G+ G+G P + L+GQ +V
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGH---------FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVA 3315 HSP 8 Score: 106.301 bits (264), Expect = 2.924e-22 Identity = 80/266 (30.08%), Postives = 130/266 (48.87%), Query Frame = -3
Query: 655 NMQITTGRYHTLLIRNS-SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ 1443
+ + +G H L + + VYS G + G LGHG + C I V+ V+A H+A V +G+++T G GH D+ +P+LVEA++G +A +G T+ LT V++ G +G+LG G + P ++ L +G VV++ G + + +T +G VY++G G LGHG + +PR +Q + G V+ ++ G H V G VYTWG G+LG G P + +L+G+
Sbjct: 4041 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS-EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4301 HSP 9 Score: 97.0561 bits (240), Expect = 2.494e-19 Identity = 84/323 (26.01%), Postives = 153/323 (47.37%), Query Frame = -3
Query: 679 PTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHG---PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPE 1632
P +C L +L Q+ ++ +S + + ++ + + + +Q + S ++V+ +A + G ++ L VYS G G LGHG P V + +V+ ++ ++A + GE++T G + GH + P LV +KG+ VA +G T+ +T G V++ G +G+LG G + TPK +E L+ + VV++ G + + +T +G VYS+G G N LGHG +++ P+ ++ +G V+ V+AG H +A+ V++WG + H D + T PE
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGR--VYTQAYNSDTLAPQLVQGL-ASRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPE 751 HSP 10 Score: 96.2857 bits (238), Expect = 3.644e-19 Identity = 76/261 (29.12%), Postives = 116/261 (44.44%), Query Frame = -3
Query: 352 KQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ-PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGL--YHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1125
++ AAGL + + V+ G N QLG P E L + +VVQ+A G + VT G VY+ G +N LG G PR I V + V +G H A+ G V++WG+G G+LGH ++ P + +LK + + + L G +Y +G +G LG D ++P+++ L HRV QV+ G T+ +T G +F +GD + +LG GC P I
Sbjct: 2945 RKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL-NVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3199 HSP 11 Score: 96.2857 bits (238), Expect = 3.740e-19 Identity = 72/253 (28.46%), Postives = 126/253 (49.80%), Query Frame = -3
Query: 352 NFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1104
++T+ G +Y G N GQLG + P E L + V Q+ G + VT +G +Y+ G G+ LG G ++ P +++ + + + V++G +H +A+ S G VY+WG+ G+LGHG+ P + SL+G V V A + + G +Y +G +G LG D S+ ++P+L++ L+ HRV ++ +G T+ +T ++ +GD + +LG GC P +I
Sbjct: 3943 DWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV-QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4191 HSP 12 Score: 74.7146 bits (182), Expect = 2.022e-12 Identity = 61/231 (26.41%), Postives = 104/231 (45.02%), Query Frame = -3
Query: 331 PKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLA----VQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMED 1005
P E L +G V QIA L ++ NG VY+ S+ P+ +Q + + + + H +A+ ++G VY+WG G G LGHGD + P+ + + G+ A V + + + G +Y +G +G LG G S+ P L+ L+ +V V+ +G T+ VT G+++ +GD + +LG GC P I +++D
Sbjct: 442 PIQCEGLANLG-VTQIACAEKRFLILSRNGRVYTQAYNSD----------TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 9.538e-32 Identity = 92/276 (33.33%), Postives = 145/276 (52.54%), Query Frame = -3
Query: 349 IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGH-GEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDK-TLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIF 1170
+ PR + + V GL TVF+ G VYTCG N GQLGH + R P+ V L+ ++V ++ G ++ L + D G VY++G S+ LG G ++ PR I++ + +++V+ G H +A+ + V+ WG+ G+LG G + K T P+ L SL G +QV A +FVL GA++G+G FG LG D +D+ + P LL LR+ ++ + G HT +T G +F FG QLGH++ + P ++F
Sbjct: 22 VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS--DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289 HSP 2 Score: 117.857 bits (294), Expect = 5.001e-26 Identity = 88/293 (30.03%), Postives = 141/293 (48.12%), Query Frame = -3
Query: 391 HAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGH-GDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQ-QNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHT-VVVTHRGRMFGFGDNERAQLG 1260
H FVL G V+TCG N GH + + +P V A+ V+ G T+ L +G VY G ++ GQLG G + P+ ++ L + +VQ+A G + L ++ V+ +G LG G + + P+ +++ G+ ++V+AG H + SG ++ WG+ G+LG DE D+ +P L SL+ Q V +C + T L G V+ FG G+G LG + + PR + L V++++ G HT V GR++ FG QLG
Sbjct: 45 HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 3 Score: 110.923 bits (276), Expect = 7.531e-24 Identity = 76/294 (25.85%), Postives = 145/294 (49.32%), Query Frame = -3
Query: 556 RYHTLLIRNSSVYSCGSSLCGVLGHG---PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQV-CARKRKTFVLVDGGAVYGFGWMGFGSLG 1422
R+ ++ + +VY+CG + G LGH + Q VA N++ VS + H + G+V+ G +S G + I PR ++++ I QVA G ++ L++ V+ G N +GQLG G D + + +P+ ++ L + +Q+AAG ++ +T +G ++ +G LG ++ + + P +++ + + ++ + G++H A+ G V+T+G G G+LGH + P + L G + ++ C R+ + + G +Y FG G G LG
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVAL------DAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328 HSP 4 Score: 110.538 bits (275), Expect = 1.050e-23 Identity = 88/275 (32.00%), Postives = 138/275 (50.18%), Query Frame = -3
Query: 682 QSVEQSSDMVQTSAGNM-QITTGRYHTLLIRNS-SVYSCGSSLCGVLGH-GPETTQCVAFTRINFPSLANV--IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVA-VDSSGYVYTWGKGYCGELGHGDEIDKTLP 1488
+S ++ +V A N+ ++ G HTL + + VY+ G G LG G E +C+ R N SL+++ +QV+ H+ + ++ EVF G N G + P+L++++ GIP QVAAG + LT G ++ G N GQLG D DR P ++ L R +V I G + +T G V++FG+G LGH +E PR + F+ G V ++ G +H A V SSG +Y++G G G+LG G ++ P
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRVPR-NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338 HSP 5 Score: 75.485 bits (184), Expect = 9.334e-13 Identity = 67/209 (32.06%), Postives = 100/209 (47.85%), Query Frame = -3
Query: 832 MQITTGRYHTL-LIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINF-PSLANV--IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVV-QIAAGPSYVLT-VTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQ 1440
+Q+ G YH+L L + S V+ G + G LG G T C T SL + +QV+A H+ + SG +F G N G D + P L+++++ + G + T LT++G V+T G +GQLGH T P+ V E +GS+V +IA G + V +G +YSFG G N LG G N P ++
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLG---TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342 HSP 6 Score: 58.151 bits (139), Expect = 1.934e-7 Identity = 57/219 (26.03%), Postives = 96/219 (43.84%), Query Frame = -3
Query: 991 PTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTS---AGNMQITTGRYHTLLIRNS-SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFT-VFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVE 1632
P +SL D+ Q+ G Y ++ S ++F + +L +Q+S + S MQ+ G H+ ++ S +++ G + G LG E + V + S ++ + ++H A + + G VFT G GH T I PR V + G ++A G T F+ G +Y+ G +GQLG G T +R +P TV+
Sbjct: 128 PRNIKSLSDIQIVQVAC--GYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.018e-31 Identity = 96/298 (32.21%), Postives = 150/298 (50.34%), Query Frame = -3
Query: 448 INFPSLANVIQ--------VSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIA--AGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVV 1311
++ P+L IQ V++ H + GEV++ G+ GH + P RPR++E+++GI VAAG + +T G +YT G +G+LGH D++D+ PK VE L+ V+ IA +G + L +TD+ V+S+G G LG G P I + G+ V++V G + VA+ SG VYTWGKG LGHG + P + L+G+ + + + G VY +G G LG G ++ I RPRL+ L+ +V++V+ G HT+
Sbjct: 4027 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT--GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317 HSP 2 Score: 130.183 bits (326), Expect = 7.359e-30 Identity = 100/325 (30.77%), Postives = 157/325 (48.31%), Query Frame = -3
Query: 442 VYSCGSSLCGVLGHG------PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVG-SVVQIAAGP--SYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVT 1389
VYSCG + G LG G P Q A + + + V + HA + G+VF+ G+ GH +PRL+EA+K + +A G + + LT G +YT G +G+LGHGD + PK V++L +G V+Q+A G + L +TD G+V+S+G G LG G + P+ I+ +G V ++ G + +A+ SG V+TWGKG LGHG ++ P+ + L+G+ V V + D G VY +G G G G + +P L+ L ++++V+ G H+V T
Sbjct: 3014 VYSCGEATNGRLGLGMSSGTVPIPRQITALSSY----VVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG--VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG---NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326 HSP 3 Score: 129.798 bits (325), Expect = 9.714e-30 Identity = 93/332 (28.01%), Postives = 161/332 (48.49%), Query Frame = -3
Query: 358 TRINFPSLA------NVIQVSASQNHAAFVLQSGEVFTCGD--NSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAG--DEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPT 1317
++I PS + NV+QV+ V G+V++CG+ N G PI PR + A+ K+VA +G LT G V++ G G+LGH + P+ +E L + + IA G S+ +T +G +Y++G G LGHG+ + +P+ ++ G V++V+ G D +A+ G V++WG G G+LG G +P+++ L GQ Q+ + + L G V+ +G + LG G + +P++++ LR ++ V+ G H + VT G+++ +GDN+ Q G+ T +PT
Sbjct: 2979 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPT 3302 HSP 4 Score: 125.561 bits (314), Expect = 2.407e-28 Identity = 87/268 (32.46%), Postives = 134/268 (50.00%), Query Frame = -3
Query: 388 GRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDR-PTPKTVELLER-VGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC--ARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH 1179
G I P E + + QVA G +T +G VY+CG T+G+LG G + P P+ + L V V + +G + +T +G V+S+G G + LGH + N +PR I+ K K + ++ G H A+ SSG +YTWG G G LGHGD + P+ + L G +QV +R +T L D G V+ +G FG LG RG S+ P+ ++ L V Q+ G ++ +T G ++ +G + +LGH
Sbjct: 2978 GSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK--RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240 HSP 5 Score: 125.561 bits (314), Expect = 2.472e-28 Identity = 81/269 (30.11%), Postives = 136/269 (50.56%), Query Frame = -3
Query: 361 PRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEP 1161
P L+E+++ + K+VA +G + L+ +G VY+ G G+LGHG+ P+ +E L + VV +AAG ++ VT G +Y++G G LGH + +++ +P+ ++ + V + +GD + + V++WG G G+LG G +P + SL G V+V + + L GAVY +G + LG G D + RPR + L+ +V ++TG H V T G ++ +GDN+ QLG T P
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294 HSP 6 Score: 115.931 bits (289), Expect = 3.191e-25 Identity = 81/269 (30.11%), Postives = 133/269 (49.44%), Query Frame = -3
Query: 382 IFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPS--YVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTF--KRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC--ARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDT 1170
+ P E + + QVA + L+R G VYT N+ D P+ V+ L ++V+IAA + L + G VYS+G G LGHG+ +P+ I F K+ G HV+ ++ G + A+ + G +YTWG+G G LGHG D+ +P + LKG + V + +T + + G V+ +G +G LG RG SD P+L++ L++ V +V G ++ +T G+++ +G + +LGH T
Sbjct: 440 VIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694 HSP 7 Score: 112.849 bits (281), Expect = 2.928e-24 Identity = 92/320 (28.75%), Postives = 153/320 (47.81%), Query Frame = -3
Query: 352 VIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN--FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGS-VVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVS--AGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCL-EPTEI 1287
V+QV+ ++ + ++G V+T NS + P+LV+ + ++AA + + L G VY+ G G+LGHGDT PK + ++ G VV IA G +Y +T G +Y++G G+ LGHG ++E P + K G+ V+ V+ +GD +AV +G V++WG G G+LG G P+ + L+ ++V + + L G VY +G LG G + + P+LL+ L+ +V V+ G H + +T + +G N++ Q DTLR EPT +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK--GLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ-HFDTLRVTKPEPTAL 756 HSP 8 Score: 110.923 bits (276), Expect = 1.047e-23 Identity = 85/273 (31.14%), Postives = 135/273 (49.45%), Query Frame = -3
Query: 637 GRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRIN--FPSLANVIQ------VSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN--FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVC 1425
GR+ T L + V+S G G LGH F+R+N P L ++ ++ +H+A + SGE++T G GH D + +P++V+ + G QVA G T+ LT +GLV++ G G+LG G ++ P+ +E L G V QI G + L +T +GVV+++G G F LGHG + +P+ ++ + G ++ V+ G H +AV SG VY WG G+ G+G P + L+GQ +V
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGH---------FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQL-KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVA 3316 HSP 9 Score: 106.301 bits (264), Expect = 2.776e-22 Identity = 80/266 (30.08%), Postives = 130/266 (48.87%), Query Frame = -3
Query: 655 NMQITTGRYHTLLIRNS-SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ 1443
+ + +G H L + + VYS G + G LGHG + C I V+ V+A H+A V +G+++T G GH D+ +P+LVEA++G +A +G T+ LT V++ G +G+LG G + P ++ L +G VV++ G + + +T +G VY++G G LGHG + +PR +Q + G V+ ++ G H V G VYTWG G+LG G P + +L+G+
Sbjct: 4043 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS-EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQ--GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4303 HSP 10 Score: 96.6709 bits (239), Expect = 3.552e-19 Identity = 73/243 (30.04%), Postives = 108/243 (44.44%), Query Frame = -3
Query: 352 VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ-PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGL--YHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1071
V+ G N QLG P E L + +VVQ+A G + VT G VYS G +N LG G PR I V + V +G H A+ G V++WG+G G+LGH ++ P + +LK + + + L G +Y +G +G LG D ++P+++ L HRV QV+ G T+ +T G +F +GD + +LG GC P I
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL-NVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNI 3200 HSP 11 Score: 96.2857 bits (238), Expect = 4.077e-19 Identity = 73/256 (28.52%), Postives = 124/256 (48.44%), Query Frame = -3
Query: 679 TTGRYHTLLIRNSSVYSCGSSLCGVLGHG---PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPE 1431
+ G ++ L VYS G G LGHG P V + +V+ ++ ++A + GE++T G + GH + P LV +KG+ VA +G T+ +T G V++ G +G+LG G + TPK +E L+ + V+++ G + + +T +G VYS+G G N LGHG +++ P+ ++ +G V+ V+AG H +A+ V++WG + H D + T PE
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPE 752 HSP 12 Score: 96.2857 bits (238), Expect = 4.077e-19 Identity = 72/253 (28.46%), Postives = 126/253 (49.80%), Query Frame = -3
Query: 352 NFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1104
++T+ G +Y G N GQLG + P E L + V Q+ G + VT +G +Y+ G G+ LG G ++ P +++ + + + V++G +H +A+ S G VY+WG+ G+LGHG+ P + SL+G V V A + + G +Y +G +G LG D S+ ++P+L++ L+ HRV ++ +G T+ +T ++ +GD + +LG GC P +I
Sbjct: 3945 DWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV-QLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4193 HSP 13 Score: 75.0998 bits (183), Expect = 1.605e-12 Identity = 60/231 (25.97%), Postives = 105/231 (45.45%), Query Frame = -3
Query: 331 PKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLA----VQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMED 1005
P E L +G V+Q+A L ++ NG VY+ S+ P+ +Q + + + + H +A+ ++G VY+WG G G LGHGD + P+ + + G+ A V + + + G +Y +G +G LG G S+ P L+ L+ +V V+ +G T+ VT G+++ +GD + +LG GC P I +++D
Sbjct: 443 PIQCEGLASLG-VMQVACAEKRFLILSRNGRVYTQAYNSDM----------LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC6_MOUSE (E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.138e-29 Identity = 83/260 (31.92%), Postives = 136/260 (52.31%), Query Frame = -3
Query: 394 RPRLVEA-MKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGE-QQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHG-DEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQL 1164
+PR ++A GI Q A+G + ++ L VY+CG N+ GQLG Q P+ ++ L + V ++ G + + V G V+++G+GS LG GE ++ F P I+ G+ +++VS G H +A+ G+V++WG+ G+LG G + + +P+ + SL+G QV A +F L G +G+G G L V ++I +P + L+N V +S G HT V+T G++F FG N QL
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALA--GIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 267 HSP 2 Score: 95.5153 bits (236), Expect = 5.231e-19 Identity = 82/301 (27.24%), Postives = 139/301 (46.18%), Query Frame = -3
Query: 580 MQITTGRYHTLLI-RNSSVYSCGSSLCGVLGHG-------PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSN-----FCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFG 1440
+Q +G +H+LL+ N VYSCG + G LG PE Q + ++ VS + H+ V G+VF G S G + F P ++A+ GI QV+ G ++ L+ G V++ G N+ GQLG G +++ + P+ V+ LE + + Q+AAG ++ ++ G SFG GSN G+ ++ ++P +I K + V+ +S G EH + G V+T+G G+L + P+ + + G+++ CA + G V G
Sbjct: 25 LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDL--------VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGALK--NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312 HSP 3 Score: 95.1301 bits (235), Expect = 6.611e-19 Identity = 72/289 (24.91%), Postives = 146/289 (50.52%), Query Frame = -3
Query: 439 NVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRP-TPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQ-QNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELG-HGDEIDKTL--PEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTH 1290
++Q ++ ++H+ + + V++CGDNS G R + RP ++A+ + V+ G +V + +G V+ G + GQLG G+ ++ P ++ L + ++Q++ G + L ++++G V+S+G S LG G+ +++ P+ +++ +G+ + +V+AG H A+ +G + WG G+L G+++ + + P + +LK + + T VL + G V+ FG G L R P+L++ + RVSQ+ YHT+ +
Sbjct: 23 ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVY 303 HSP 4 Score: 75.0998 bits (183), Expect = 1.246e-12 Identity = 72/269 (26.77%), Postives = 126/269 (46.84%), Query Frame = -3
Query: 733 DGNWKRL-LRFLQSVEQSSDMVQTSAGNMQITT-GRYHTLLI-RNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQL---GHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGK 1521
D +W +L R QS E+ + + ++ + + G+ H++ + V++ G+ G LG G T+I + +IQVS H+ + + G VF+ G NS G R P+ V++++GIP QVAAG + L+ G + G+N GQL G+ + P ++ L+ + SV+ I+ G + +T+ G V++FG S+ L + + P+ I+ G V ++ H +A YVYT G+
Sbjct: 48 DNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ 307 HSP 5 Score: 58.5362 bits (140), Expect = 1.764e-7 Identity = 52/192 (27.08%), Postives = 85/192 (44.27%), Query Frame = -3
Query: 892 MQITTGRYHTL-LIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSS--FCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKT----VELLERVGSVVQIAAGPSY--VLTVTDNGVVYSFGSG 1440
+Q++ G YH+L L + V+S G + G LG G + ++ + QV+A H+ + +G F G N S I++P + A+K + ++ G T LT +G V+T G N+ GQL +P+P++ +L+E +G V SY + V G V S G G
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL-------QPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLGRG 314 HSP 6 Score: 56.225 bits (134), Expect = 7.568e-7 Identity = 39/153 (25.49%), Postives = 71/153 (46.41%), Query Frame = -3
Query: 391 QPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 849
+PR ++ G+ +L+ ++G+ H + + S+ VY+ G G+LG + PE + +L V K + + G V+ +G G LG + + P + L ++ QVS G YH++ ++ G +F +G N QLG
Sbjct: 11 KPRRLKA-GTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.702e-28 Identity = 87/282 (30.85%), Postives = 137/282 (48.58%), Query Frame = -3
Query: 442 IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSV-VQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVT 1284
+ V++ H + GEV+ G+ GH + RP+LVE + G+ +A G + +T G V T G +G+LGHGD++D+ PK VE L ++ + +G + L +TD+ V+S+G G LG G P I++ G+ V++V G + VA+ SG VYTWGKG LGHG P+ + +L+G+ + + D G VY +G G LG G I RPRL+ L+ + +V+ G HT+ ++
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR-MSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLA--GLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414 HSP 2 Score: 125.176 bits (313), Expect = 3.067e-28 Identity = 111/378 (29.37%), Postives = 176/378 (46.56%), Query Frame = -3
Query: 304 LLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSL----ANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGH--RDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGP--SYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNE-RAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1410
++ ++ VY+CG G LG G T V P L + V + HA + G+VF+ G+ GH R T + +PRLVEA++ + VA G + + ++ QG +YT G +G+LGHGD + PK V L VVQ+A G + L +T++G V+S+G G LG G + P I+ G+ V+++ G + +A+ +G V+TWGKG LGHG + P+ + L+G+ + V + D G VY +G G G + V+ K P L+ L V++V+ G H++ G D E R + + R L + + I+E E TL E++
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLG--VTHNVPLPH-QLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT---LDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLS--GIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIAW---GLPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEAK 3395 HSP 3 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 99/347 (28.53%), Postives = 163/347 (46.97%), Query Frame = -3
Query: 361 SSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEP 1395
S++Y G + G LG G E ++ T SL +Q++ + V G++F G S G + P L+ +++ + K+VA +G + LT +G VY G G+LGHG+ PK VE L + SV IA G ++ +T +G V ++G G LGHG+ +++ +P+ ++ + +GD + + V++WG G G+LG G LP + SL G V+V + + L GAVY +G F LG G D + RP+ + L+ ++ ++TG H V + G ++ +GDN+ QLG T+ P
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389 HSP 4 Score: 118.242 bits (295), Expect = 6.058e-26 Identity = 84/302 (27.81%), Postives = 142/302 (47.02%), Query Frame = -3
Query: 391 IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAG--DEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1284
I ++ V Q G+V+ CG+ ++ G T + P + ++ K+VA +G + LT G V++ G G+LGHG+ P+ VE L R + +A G S+ ++ G +Y++G G LGHG+ + +P+ + G V++V+ G D +A+ G V++WG G G+LG G P + L G VQ+ + + L G V+ +G + LG G + +P+ + LR RV V+ G H + VT G+++ +GDN+ Q G
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHN-VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL-RAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALA--GRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316 HSP 5 Score: 103.605 bits (257), Expect = 2.091e-21 Identity = 85/283 (30.04%), Postives = 134/283 (47.35%), Query Frame = -3
Query: 610 NMQITTGRYHTL-LIRNSSVYSCGSSLCGVLGHGPETT--QCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVL 1443
+ + +G H L L VY+ G G LGHG + + +N S+A++ SA H+A + SG V T G GH D+ RP+LVEA+ G +A +G T+ +T V++ G +G+LG G + P +E L +G VV++ G + + +T +G VY++G G LGHG + +P+ + + G ++ ++ G H VA SG VYTWG G+LG G P + +L+G+ V+V T L
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSA---HSAAITASGHVLTWGKGRYGRLGHGDS-EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ--GKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413 HSP 6 Score: 93.5893 bits (231), Expect = 3.062e-18 Identity = 68/242 (28.10%), Postives = 110/242 (45.45%), Query Frame = -3
Query: 352 VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGL--YHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1071
V G N QLG P + + R+ + IA G + V+ +G VY+ G G+N LG G N P + ++ V + V +G +H +A+ G V++WG+G G+LGHG+ P + +L+ + V + + G +Y +G +G LG D ++P+L+ L RV QV+ G T+ +T G +F +GD + +LG G P EI
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRL-RPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEI 3225 HSP 7 Score: 88.9669 bits (219), Expect = 8.114e-17 Identity = 65/229 (28.38%), Postives = 109/229 (47.60%), Query Frame = -3
Query: 394 VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGD---EIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQL 1071
Y+ GT +LGHGDT R P + LE+ V + G SY +T G + ++G G+ LGHG + P + V + + +GD H +A+ S G V+ WG G G+LG+G+ + L E L ++ +V A + + L G +Y +G +R V + PRL+ L++ R+ V+ + H + ++ G +FG+G N+ Q+
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858 HSP 8 Score: 86.6557 bits (213), Expect = 4.011e-16 Identity = 68/242 (28.10%), Postives = 116/242 (47.93%), Query Frame = -3
Query: 352 VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEI 1071
+Y G N GQLG + TP E L + VQ+A G + VT +G +++ G GS LG G + P + + + V + V++G +H +A+ + G VY WG+G G+LGHG+ + P+ + L G + + + G V +G +G LG D S+ +RP+L++ L +R ++ +G T+ +T ++ +GD + +LG GC P +I
Sbjct: 4051 IYGWGHNHRGQLGGLEGSRIKTPTPCEALSLL-RPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 4288 HSP 9 Score: 71.2478 bits (173), Expect = 2.433e-11 Identity = 71/255 (27.84%), Postives = 119/255 (46.67%), Query Frame = -3
Query: 733 EQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVA--AGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ----PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGK 1479
E + D+ + AG+ + GR+ + N + YS G+ LGHG + V T+I V V +++A + G + T G + GH ++ P LV A+ VA +G ++ LT +GLV+ G +G+LG+G+ P VE L RV V AG + + ++ G +Y++G + CLGH + Q PR + + + K ++ V+ H +A+ SSG V+ WG+
Sbjct: 610 EVAHDVFISIAGHCE---GRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP-TKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSL-PTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVF---AGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHK--RIVDVAVSVAHCLALSSSGEVFGWGR 852 HSP 10 Score: 63.929 bits (154), Expect = 4.741e-9 Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = -3
Query: 361 HVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVS--TGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEP 780
H +A+DS+ Y+WG G LGHGD + +P + +L+ V + + GG + +G + LG G SD P L+ L +H V V+ +G H++ +T G +F +GD + +LG+ G L+P
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQP 765
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.565e-28 Identity = 100/342 (29.24%), Postives = 161/342 (47.08%), Query Frame = -3
Query: 430 ITTGRYHTLLIR-NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQN---HAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVE-AMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNG-VVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHG-DEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGR 1434
I G+Y T +I + SV +CG G LG G Q ++ F ++ +VS+S+ H GEVF+ GD GH ++ + P+L++ ++G V+AG + +T G +YT G G+LGHGD+ R P V+ + VG +++ G S+ + ++ +G V+SFG G N LGHG+ ++P+ I+ +G+ + +V AG + +A+ S+G VY WG G C LG G E P+ + L V V L VY +G G G + I +P+ + L + Q+S G H++ T R
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQST-LKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG--QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPR 738 HSP 2 Score: 123.25 bits (308), Expect = 1.392e-27 Identity = 96/336 (28.57%), Postives = 160/336 (47.62%), Query Frame = -3
Query: 442 QITTGRYHTLLIR-NSSVYSCGSSLCGVLGHGPETTQCV--AFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNG-VVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVT 1437
Q+ G+ T +I+ N +V +CG G LG G V + + + ++ S H+ + +SGEVF+ GD GH ++ R RPR +EA++G Q++ G + +T G ++T G +G+LG G+T ++ P+ V LE + Q+A G ++ L V+ +G +V++FG G LG G + P+ I G+ + +V+ G + VA+ G+VYT+G+ L G + P+ + L G + V T L G VY +G G LG G ++ + P L+ L+ V Q+S G H+ T
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY-QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359 HSP 3 Score: 116.701 bits (291), Expect = 1.819e-25 Identity = 104/375 (27.73%), Postives = 170/375 (45.33%), Query Frame = -3
Query: 388 FLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLV-EAMKGIPCKQVAAGLN-FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSG-YVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGW---MGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH 1494
F + +SD +T A I TG ++ VY GS+ L G TQ PS ++ + A Q + G V CG S G D+ +L E + I + G + T+ T +G V++ G +G+LGHG++ + PK ++ + VV ++AG + VT++G +Y++G G LGHG+ + R I T + +V VS G H +A+ G V+++G G G+LGHGD P+ + +L+G +VCA + + L G VY +G +G GS +RP+L++ L R+ VS G H + ++H ++ +G+N Q G
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699 HSP 4 Score: 112.079 bits (279), Expect = 4.695e-24 Identity = 81/283 (28.62%), Postives = 132/283 (46.64%), Query Frame = -3
Query: 346 DTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLE--RVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKG-QLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 1185
+ GR + P + +QV G N T + G V CG ++G+LG G++ D + L+ V +V + + +T++G V+S+G G LGHG + +PR I+ +G V+++S G +H V S G ++T+G G G LG G+ +K LPE + +L+G Q+ C V DG V+ FG +G LG G S P+ +D L + +V+ G +V +T G ++ FG + L R P +I +
Sbjct: 4012 EAGRNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL---GNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4287 HSP 5 Score: 107.071 bits (266), Expect = 1.946e-22 Identity = 90/320 (28.12%), Postives = 152/320 (47.50%), Query Frame = -3
Query: 358 PSLANVIQVSASQNHAAFVLQS-GEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN---FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSG-YVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPT 1302
PS + QV QN FV+Q+ G V CG+ S G ++ + ++ A++G Q+ ++ LT G V++ G +G+LGHG++ + P+ +E L+ VVQ++ G + VT +G +++FG+G LG G N+ P + + G + +V+ G H +AV + G V+ +G G G+LG G+ K+ P+ + L G +V + + L G VY FG +G P+ G + RP+ + L + V+ G HT+ + G ++ +G N QLG EPT
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE--GYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPT 4335 HSP 6 Score: 87.4261 bits (215), Expect = 2.542e-16 Identity = 67/229 (29.26%), Postives = 105/229 (45.85%), Query Frame = -3
Query: 391 VYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAG-DEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRM-FGFGDNERAQLG 1071
VY G HGQL ++ P + Q+ G + + NG V + G GS LG G + I + V L S G D H +A+ SG V++WG G G+LGHG+ + P + +L+G+ VQ+ + + V+ G ++ FG +G LG G + P + L +++ QV+ GL HT+ V+ G M + FGD + +LG
Sbjct: 3999 VYLWGAGRHGQLAEAG-RNVMVPAAAPSFSQAQ---QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL---GNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0015403 ID=g.arboreum_cottongen_reftransV1_0015403; Name=g.arboreum_cottongen_reftransV1_0015403; organism=Gossypium arboreum; type=contig; length=1865bpback to top |