g.arboreum_cottongen_reftransV1_0015403, g.arboreum_cottongen_reftransV1_0015403 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0015403
Unique Nameg.arboreum_cottongen_reftransV1_0015403
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1865
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeg.arboreum_cottongen_reftransV1_0015403:1..1865 .
Chr10:110992292..110997094 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A0B0P291_GOSAR (Putative E3 ubiquitin-protein ligase HERC3 OS=Gossypium arboreum GN=F383_03708 PE=4 SV=1)

HSP 1 Score: 1011.13 bits (2613), Expect = 0.000e+0
Identity = 493/500 (98.60%), Postives = 493/500 (98.60%), Query Frame = -3
Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEV-------FTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEV       FTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR
Sbjct:    1 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVSFNLAQVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 500          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A0D2U458_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G434600 PE=4 SV=1)

HSP 1 Score: 1009.98 bits (2610), Expect = 0.000e+0
Identity = 488/493 (98.99%), Postives = 492/493 (99.80%), Query Frame = -3
Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSIDDLPSHLILEILT+GKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGM+CSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPK VELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKG+HVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLR+HRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR
Sbjct:    1 MADRSRLFSIDDLPSHLILEILTSGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMNCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKMVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGIHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRDHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 493          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A061F837_THECC (Regulator of chromosome condensation (RCC1) family protein isoform 1 OS=Theobroma cacao GN=TCM_031382 PE=4 SV=1)

HSP 1 Score: 926.776 bits (2394), Expect = 0.000e+0
Identity = 441/493 (89.45%), Postives = 467/493 (94.73%), Query Frame = -3
Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSI++LPSHLILEILT+G+RLSAVDLVSLELTSRTFGG HGVYPTK RSLVDLAAFQLC TN +Y GMS SSQR++F+RCDGNWKR+LRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFP  ANV+QVSAS NHAAF++QSGEVFTCGDNSSFCCGHRDT RPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQG +YTCGTNTHGQLGHGDTQD+PTPK VE L+ VGSVVQIAAGPSYVL VTDNG VYSFGSGSNFCLGHGEQ NEFQPRAIQTFKRKG+H+LRVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPEHLISLK QLAVQVCARKRKTFVLVDGG+VYGFGWMGFGSLGFPDR +SDK+MRPR+LD LR H V+Q+STGLYHTVVVTH+GRMFGFGDNERAQLGHDTLRGCLEPTEIFI EME+E TLLSESR
Sbjct:    1 MADRSRLFSIEELPSHLILEILTSGERLSAVDLVSLELTSRTFGGSHGVYPTKFRSLVDLAAFQLCATNEVYSGMSWSSQREVFDRCDGNWKRVLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPPPANVMQVSASHNHAAFIMQSGEVFTCGDNSSFCCGHRDTSRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGHLYTCGTNTHGQLGHGDTQDQPTPKMVEQLKGVGSVVQIAAGPSYVLAVTDNGAVYSFGSGSNFCLGHGEQHNEFQPRAIQTFKRKGIHILRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEHLISLKSQLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRSLSDKVMRPRILDSLRGHHVAQISTGLYHTVVVTHKGRMFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEETTLLSESR 493          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067G3D9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011268mg PE=4 SV=1)

HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0
Identity = 401/488 (82.17%), Postives = 441/488 (90.37%), Query Frame = -3
Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGNMQITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FTRINFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G V+TCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 487          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067K5D4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20964 PE=4 SV=1)

HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0
Identity = 397/491 (80.86%), Postives = 442/491 (90.02%), Query Frame = -3
Query:  310 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSE 1782
            MADR  L SI+DLPSHL+LEILTTG RLSA+DLV LELTS+TFGG HG+YP K +S+VD AAFQLC+++G+Y GM  ++Q+++F+RC GNWKR+LRFLQ+VE+SS MV+TSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCVAF RINFP L  V+QVSAS NHAAFV++SG+VFTCGDNSS CCGH+DT RPIFRPRLVEA KG+PCKQVAAGLNFTVFLTRQG VY+CGTNTHGQLGHGDT DRPTPK +E LE VGSVVQIAAGPSYVL VTDNG VYSFGSGSNFCLGHGEQ NEF PRAIQTF+RKG+HV+RVSAGDEH VA+DSSG+VYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVDGG VYGFGWMGFGSLGFPDR VSDK+MRPR+LD LR +RVSQ+STGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+ E+ D+  + SE
Sbjct:    1 MADRYTLVSIEDLPSHLVLEILTTG-RLSAIDLVCLELTSKTFGGSHGLYPHKFKSMVDFAAFQLCVSHGVYNGMGWNAQKELFDRCGGNWKRVLRFLQTVEESSSMVKTSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFNRINFPYLGRVVQVSASHNHAAFVMESGKVFTCGDNSSSCCGHQDTSRPIFRPRLVEAFKGVPCKQVAAGLNFTVFLTRQGHVYSCGTNTHGQLGHGDTLDRPTPKIIEALEGVGSVVQIAAGPSYVLAVTDNGTVYSFGSGSNFCLGHGEQHNEFLPRAIQTFRRKGIHVVRVSAGDEHAVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGRVYGFGWMGFGSLGFPDRRVSDKVMRPRILDSLRAYRVSQISTGLYHTVAVTSQGQIFGFGDNERAQLGHDTLRGCLEPTEIFVPELADDTDVASE 490          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067GFI1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011268mg PE=4 SV=1)

HSP 1 Score: 830.861 bits (2145), Expect = 0.000e+0
Identity = 401/489 (82.00%), Postives = 441/489 (90.18%), Query Frame = -3
Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGN-MQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGN MQITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FTRINFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G V+TCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 488          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: B9HZW9_POPTR (Regulator of chromosome condensation family protein OS=Populus trichocarpa GN=POPTR_0011s12250g PE=4 SV=2)

HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0
Identity = 396/493 (80.32%), Postives = 441/493 (89.45%), Query Frame = -3
Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MAD++R  SI+DLPSHLI EILTTG RLSAVDL  LELTSRTFGG HG+YP K RSLVD AA+QLC+++ +Y GM  ++Q+ +F RC+GNWKR+LRFLQ+VE+SS MV+TSA NMQ+TTGRYHTLLIR+SSVYSCGSSLCGVLGHG ETTQCVAFTRI FPSLA VIQVSAS NHAAFVLQSGEVFTCGDNSSFCCGH DT RPIFRPRLVEA+KG+PCKQVA GLNFTVFLTRQG +YTCGTNTHGQLGHGDTQDRPTPK +ELLE VGSVVQIAAGPSYVL VTDNGVVYSFGSGSN CLGHGEQ +EF+PRAIQTF+RK +HV+ VSAGDEH VA+DSSG+VY+WGKGYCG LGHGDEIDKTLP  +  LK  LAVQVCARKRKTFVLVDGG+VYGFGWMGFGSLGFPDRG+SDK+MRPR+LD LR   VSQ+STGLYHTVVVT++G+MFGFGDNERAQLGHDTLRGCL+PTEIF+ E  D+  L SE +
Sbjct:    1 MADKNRSVSIEDLPSHLIFEILTTG-RLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFAAYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIFVQETADDTGLASEGK 492          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: V4URR7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008120mg PE=4 SV=1)

HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0
Identity = 400/489 (81.80%), Postives = 439/489 (89.78%), Query Frame = -3
Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNM-QITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGN  QITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FT INFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G VYTCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQKQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTSINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVYTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 488          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: B9SRF4_RICCO (Ran GTPase binding protein, putative OS=Ricinus communis GN=RCOM_1126130 PE=4 SV=1)

HSP 1 Score: 825.854 bits (2132), Expect = 0.000e+0
Identity = 392/493 (79.51%), Postives = 438/493 (88.84%), Query Frame = -3
Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MAD+ RL SID+LPSHLILEIL TG RLSA DLV LELTS+TFGG HG+YP K +SLVD AAFQLC ++ +Y GM  ++Q+++ +RC GNWKR+LRFL +VE+SS MV+TSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCV+F+RI FPSLA V+QVSAS NHAA++L+SGEVFTCGDNSSFCCGH+DT RPIFRPR VEA+KG+PCKQVAAGLNFTVFLTR G VY+CGTNTHGQLGHGDT DRPTPK +E  E +GSV QIAAGPSYVL VTD+GVVYSFGSGSNFCLGHGEQ NEF PRAIQTF+RK +HV+RVSAGDEHVVA+DSSG+VYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVDGG V+GFGWMGFGSLGFPDRGVSDK+MRPR+LD LR HRVSQ+STGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+ E   +  + SES 
Sbjct:    1 MADKYRLVSIDELPSHLILEILMTG-RLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFAAFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEIFLQEFGHDTGITSESE 492          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: W9R900_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025664 PE=4 SV=1)

HSP 1 Score: 812.757 bits (2098), Expect = 0.000e+0
Identity = 392/492 (79.67%), Postives = 435/492 (88.41%), Query Frame = -3
Query:  307 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSES 1782
            M +R R  SID+LPSHLILEIL++G  LSAVDLV LELTSRTFGG HG+YP K RSLVDLAAFQLC+++ IY  +S ++QR++ +RCDGNWKR+LRFL SVEQSSD+V+TSAGNMQITTG+YHT LI NSSVYSCGSSLCGVLGHG ETTQCV F+RI+FPSLA+V+QVSAS NHAAFV+QSGEVFTCGDNSS CCGH+DT RPIFRPRLVEA+KG+ CKQVAAGLNFTVFLTRQG V+TCG NTHGQLGHGD  DR TPK +ELLE  GSVVQI+AGPSYVL VTDNG VYSFGSGSNFCLGHGEQQ EFQPR IQ F+RKG+HV+RVSAGDEHVVA+DSSG VYTWGKGYCG LGHGDEIDKT PE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDR  SDK+ RPR+LDCL+ H VSQ+STGLYHTV VT+RGR+FGFGDNERAQLGHDTLRGCLEP EIF+ EM D+  +L ES
Sbjct:    1 MTERYRPVSIDELPSHLILEILSSGG-LSAVDLVCLELTSRTFGGSHGLYPQKFRSLVDLAAFQLCVSHSIYSCLSRNAQRELCDRCDGNWKRVLRFLLSVEQSSDIVETSAGNMQITTGKYHTFLISNSSVYSCGSSLCGVLGHGSETTQCVTFSRISFPSLAHVVQVSASHNHAAFVMQSGEVFTCGDNSSSCCGHKDTSRPIFRPRLVEALKGVHCKQVAAGLNFTVFLTRQGHVFTCGMNTHGQLGHGDAIDRRTPKIIELLEGAGSVVQISAGPSYVLAVTDNGEVYSFGSGSNFCLGHGEQQAEFQPRIIQAFRRKGIHVVRVSAGDEHVVALDSSGCVYTWGKGYCGALGHGDEIDKTKPELLSSLKSDLAVQVCARKRKTFVLVDSGSVYGFGWMGFGSLGFPDRRASDKVTRPRILDCLKAHHVSQISTGLYHTVAVTNRGRIFGFGDNERAQLGHDTLRGCLEPKEIFVQEMADDFGVLQES 491          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT2_PONAB (RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.369e-22
Identity = 78/275 (28.36%), Postives = 123/275 (44.73%), Query Frame = -3
Query:  580 NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVS-ASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFG 1398
            N  ++  G++ CG LG G +    +   R++  +   +  +S  S  H       GEVFT G N+    G+  T   +    +   +      +VA G   ++ LT  G V+  G N  GQ+G G T ++P P+ V    +   VV IA G    + V D G VY +G   N  LG G   N  QP   +    +G+ V RV+ G  H + +   G VY WG    G+LG G++ +++ P  +   K + + +  C     +     GG VY +G
Sbjct:   64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335          

HSP 2 Score: 102.449 bits (254), Expect = 1.438e-21
Identity = 82/287 (28.57%), Postives = 137/287 (47.74%), Query Frame = -3
Query:  340 DTGR-PIFRPRLVEAMKGI--PCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLE-RVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1185
            D G+ PIF     E ++ I   C   +AG N  ++ T    ++  GTN  G LG GD Q    P+ ++ L  +  + +   +GP  VL  T+ G V+++G  +   LG+G   +   P  I T       V+ V+ G  H + + S G V+ WG    G++G G  +++ +P  +   L+ ++ V +   +     +VD G VY +G+ G G LG    G S     P  +  L+  RV +V+ G  HT+V+T  G+++ +G N   QLG         PT + + +
Sbjct:   27 DVGKWPIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL---GNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307          

HSP 3 Score: 95.5153 bits (236), Expect = 2.821e-19
Identity = 70/238 (29.41%), Postives = 114/238 (47.90%), Query Frame = -3
Query:  556 NHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKG--IPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLG 1263
            N   +   + E+F  G N   C G  D    I  PR ++++ G  I C    +G +  V  T +G V+T G N + QLG+G T     P  +        V+++A G  + L +T +G V+++G  ++  +G G   N+  PR +    +  V V+ ++ G    +AV  +G VY WG    G+LG G+  ++  P  + +L+G    +V      T VL D G VY +G   +G LG
Sbjct:   56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHI-VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT2_HUMAN (RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.369e-22
Identity = 78/275 (28.36%), Postives = 123/275 (44.73%), Query Frame = -3
Query:  580 NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVS-ASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFG 1398
            N  ++  G++ CG LG G +    +   R++  +   +  +S  S  H       GEVFT G N+    G+  T   +    +   +      +VA G   ++ LT  G V+  G N  GQ+G G T ++P P+ V    +   VV IA G    + V D G VY +G   N  LG G   N  QP   +    +G+ V RV+ G  H + +   G VY WG    G+LG G++ +++ P  +   K + + +  C     +     GG VY +G
Sbjct:   64 NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335          

HSP 2 Score: 102.449 bits (254), Expect = 1.438e-21
Identity = 82/287 (28.57%), Postives = 137/287 (47.74%), Query Frame = -3
Query:  340 DTGR-PIFRPRLVEAMKGI--PCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLE-RVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1185
            D G+ PIF     E ++ I   C   +AG N  ++ T    ++  GTN  G LG GD Q    P+ ++ L  +  + +   +GP  VL  T+ G V+++G  +   LG+G   +   P  I T       V+ V+ G  H + + S G V+ WG    G++G G  +++ +P  +   L+ ++ V +   +     +VD G VY +G+ G G LG    G S     P  +  L+  RV +V+ G  HT+V+T  G+++ +G N   QLG         PT + + +
Sbjct:   27 DVGKWPIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGL---GNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307          

HSP 3 Score: 95.5153 bits (236), Expect = 2.821e-19
Identity = 70/238 (29.41%), Postives = 114/238 (47.90%), Query Frame = -3
Query:  556 NHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKG--IPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLG 1263
            N   +   + E+F  G N   C G  D    I  PR ++++ G  I C    +G +  V  T +G V+T G N + QLG+G T     P  +        V+++A G  + L +T +G V+++G  ++  +G G   N+  PR +    +  V V+ ++ G    +AV  +G VY WG    G+LG G+  ++  P  + +L+G    +V      T VL D G VY +G   +G LG
Sbjct:   56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHI-VLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCC1_SCHPO (Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pim1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 9.861e-22
Identity = 98/371 (26.42%), Postives = 164/371 (44.20%), Query Frame = -3
Query:  388 SVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLAN----VIQVSASQNHAAFVLQSGEVFTCGDNSSFCCG------HRDTGRPIFR------PRLVE-AMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTN--THGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGE-QQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDK-----TLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMR-----------PRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH 1392
            +VY  GS     LG G E    V   R+N P L+     V+ ++    H+A +   G V+T G N  +  G        + G  +        P  VE A+  +   +V    N T  +T  G  +T GT   + G LG+ D+Q R T +  ++  R+  + Q+A G  +++ +T  G VY++G+G  F LG    ++   Q    Q    K  +++ V AG  H  A+D+ G VY WG     + G   E ++     T P  + +L+G     +   +  T  L++ G V  +G      LG PD  + + +++           P ++  L N  V QV  G +H + VT  G+++ +G  E  ++G 
Sbjct:   72 NVYVFGSGSMNELGMGEEEMDVVYRPRLN-PILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGYSDSQKR-TAEPTQM--RLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALK--NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--VIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQ 434          

HSP 2 Score: 70.8626 bits (172), Expect = 1.410e-11
Identity = 54/190 (28.42%), Postives = 86/190 (45.26%), Query Frame = -3
Query:  787 SLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCG----HRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLER--------------VGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ-PRAIQTFKRKGVHVLRVSAG 1299
            +L N+I V A   H+  +   G V+  G N +  CG      + G  I +P LV+A++G   K +  G + T+ L   G V   G +   QLG     D   P+TV   E+              + +V+Q+  G  + L VT +G VYS+GS  N+ +G G+   +   P  +++   K V +    AG
Sbjct:  277 ALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLG---IPDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGAG 463          

HSP 3 Score: 64.6994 bits (156), Expect = 1.198e-9
Identity = 65/230 (28.26%), Postives = 100/230 (43.48%), Query Frame = -3
Query:  376 PKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNE--FQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELG---------HGDEIDKTLPEHLIS-LKGQLA----VQVCARKRKTFVLVDGGAVYGFGWMGF----GSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLR 1005
            PK V +      + +I   P+  L V      Y FGSGS   LG GE++ +  ++PR         V V+ ++ G  H  A+   G VYTWG      LG         +GD++D  L E   S ++G L+     +V      T  + D G    F W  F    G LG+     SD   R      +R   + Q++TG  H + +T  G+++ +G+ ++ QLG   L 
Sbjct:   48 PKPVRVPGSAKRINKIPELPTERLNV------YVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDNGCC--FTWGTFRCSDGVLGY-----SDSQKRTAEPTQMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLE 264          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RPGR_MOUSE (X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus GN=Rpgr PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.023e-21
Identity = 86/313 (27.48%), Postives = 147/313 (46.96%), Query Frame = -3
Query:  391 NFPS---LANVIQV--SASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEI--DKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1308
            N PS     N I +  S    H A V  + +++  G N+    G   +   I +P  ++A+K    K  A G N T+  T  G VY  G N  GQLG GDT DR T   +       ++ Q++AG +    +T++G ++ +G  S   +G  ++ N   P  +      G  +  +S G  H   V   G +YT+G+   G+LG  +E+  +   P+ ++ +  ++ +QV      T VL +   VY FG   FG LG        +   P++++ +++ ++  +S G  HT ++T  G ++ FGD    +LG
Sbjct:   25 NIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV-IQVACGGGHTVVLTE-KVVYAFGLGQFGQLGL--GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328          

HSP 2 Score: 61.2326 bits (147), Expect = 2.332e-8
Identity = 51/196 (26.02%), Postives = 82/196 (41.84%), Query Frame = -3
Query:  346 VTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 930
            V D G V++FG            + +F       F  K    + +S GDEH   V  +  +Y +G    G+LG G +     P  + +LK + + +  C R   T V  D G VY  G    G LG  D    D+    +++       + Q+S G   +  +T  G++F +GDN   Q+G +       P E+ +
Sbjct:    8 VPDTGAVFTFG------------KTKFAENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH-TLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV 188          

HSP 3 Score: 60.077 bits (144), Expect = 5.312e-8
Identity = 76/266 (28.57%), Postives = 117/266 (43.98%), Query Frame = -3
Query:  802 GRYHTLLIRNSS-VYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVI-QVSASQNHAAFVLQSGEVFTCGDNS----------SFCCGHRDT-GRPI-------------------------------------FRPRLVEAMKGIPCK--QVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG----DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQ--NEFQPRAIQTFKRKGVHVL 1425
            GR HTL+  ++  VY+ G +  G LG G +T     F +I F + A+ I Q+SA  N +A + + G++F  GDNS          + C  H  T G+PI                                        R  + + GIP +  QVA G   TV LT + +VY  G    GQLG G    +T +   PK +E + +   +  I+ G ++   +T+ G++Y+FG G +  LG G +   N+F P     F R  V ++
Sbjct:   95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSE---PKIIERI-KDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLI 354          
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: IBTK_XENLA (Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.466e-21
Identity = 75/234 (32.05%), Postives = 110/234 (47.01%), Query Frame = -3
Query:  268 PSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH------DTLRGCLEPTEI-FIHEMEDEATLLSESR*NAMNCVCFYGD 948
            P  V   +D   +Y++G   NF LGHG QQ++  P  ++ F R GV++ ++     H V +   G VYT G G  G LGHGDE+   +P  +  L+G    QV   K  T VL + G VY FG   F  LG      +  + R      ++   V  V+ G +HTV+ T +  ++  G N   QLG+      +    C  P ++  +H  +   TL+S S   A  CV   GD
Sbjct:  133 PHIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWT-KDAVYTVGLN-GGQLGYLQDPNGEKFVSC--PRQVSALHHKDINITLVSASD-GATVCVSERGD 361          

HSP 2 Score: 91.2781 bits (225), Expect = 1.146e-17
Identity = 89/297 (29.97%), Postives = 129/297 (43.43%), Query Frame = -3
Query:  562 SSVYSCGSSLCGVLGHGPETTQCVAFTRINFP-SLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLG-HGDTQDRPTPKTVELLERVG-SVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ----PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGH------------GDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGS 1395
            + +Y+ G ++   LGHG + ++        FP S   + Q+   + H+ F+ Q G+V+TCG       GH D    +  PRLVE ++G PC QVA   + TV LT  G VYT G NT  QLG      +   P+ ++     G +V+ +AAG  + +  T +  VY+ G      LG+ +  N  +    PR +     K +++  VSA D   V V   G +Y   +  C +L              G    K  PEHL    GQ A          F L   G V  F W   GS
Sbjct:  143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLV-PRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGG-QLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLASKQLNLKKVLVSGGILEHKAAPEHLKENGGQPA--------SVFALDQAGRV--FCWKSPGS 426          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0P291_GOSAR0.000e+098.60Putative E3 ubiquitin-protein ligase HERC3 OS=Goss... [more]
A0A0D2U458_GOSRA0.000e+098.99Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061F837_THECC0.000e+089.45Regulator of chromosome condensation (RCC1) family... [more]
A0A067G3D9_CITSI0.000e+082.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A067K5D4_JATCU0.000e+080.86Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A067GFI1_CITSI0.000e+082.00Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
B9HZW9_POPTR0.000e+080.32Regulator of chromosome condensation family protei... [more]
V4URR7_9ROSI0.000e+081.80Uncharacterized protein OS=Citrus clementina GN=CI... [more]
B9SRF4_RICCO0.000e+079.51Ran GTPase binding protein, putative OS=Ricinus co... [more]
W9R900_9ROSA0.000e+079.67Uncharacterized protein OS=Morus notabilis GN=L484... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RCBT2_PONAB8.369e-2228.36RCC1 and BTB domain-containing protein 2 OS=Pongo ... [more]
RCBT2_HUMAN8.369e-2228.36RCC1 and BTB domain-containing protein 2 OS=Homo s... [more]
RCC1_SCHPO9.861e-2226.42Protein pim1 OS=Schizosaccharomyces pombe (strain ... [more]
RPGR_MOUSE1.023e-2127.48X-linked retinitis pigmentosa GTPase regulator OS=... [more]
IBTK_XENLA5.466e-2132.05Inhibitor of Bruton tyrosine kinase OS=Xenopus lae... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 326..339
score: 29.76
coord: 452..466
score: 33.33
coord: 345..361
score: 35.29
coord: 436..452
score: 29.41
coord: 290..306
score: 44.12
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 182..232
e-value: 2.3E-6
score: 28.0
coord: 342..383
e-value: 4.0E-6
score: 27.2
coord: 288..339
e-value: 3.0E-10
score: 40.4
coord: 236..283
e-value: 2.0E-12
score: 47.4
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 117..127
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 436..446
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 289..342
score: 14.082
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 395..449
score: 11.991
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 236..288
score: 14.705
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 343..394
score: 11.429
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 183..235
score: 9.378
NoneNo IPR availablePFAMPF13540RCC1_2coord: 433..461
e-value: 7.8E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 1..493
NoneNo IPR availablePANTHERPTHR22870:SF209GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13coord: 1..493
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 116..265
e-value: 3.7E-39
score: 134.0
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 271..470
e-value: 2.1E-39
score: 134.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 125..483

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0015403 ID=g.arboreum_cottongen_reftransV1_0015403; Name=g.arboreum_cottongen_reftransV1_0015403; organism=Gossypium arboreum; type=contig; length=1865bp
GAATTATGATTATTTGCAGATTGCAAGAGAAGAATTGGGCAATAAAGAAC
AAAGCAATCTTCTGAACTCGAATAAGTAAAACTTAACAACAAACATGGAT
AGAAGCAGGGGAAAAGCAACTATCACGGCCTACATATGAAACTTTATAAA
ATATAACAGTCAGCATCCAGAATGCGGAGTTAAAAATTCATACAATTCTA
CAAGAATTTTAATGAGGGATAAACGGTGTTTCACCTCTCAAGTAGGAACA
CAAGACGGTCGTCACTGATCTCCATAAAAGCAGACGCAATTCATTGCATT
TCATCTGCTTTCTGAAAGAAGAGTTGCTTCATCTTCCATTTCATGAATAA
AAATCTCTGTAGGTTCAAGGCAACCTCTCAGTGTGTCATGACCAAGTTGT
GCTCGTTCGTTGTCTCCAAACCCGAACATCCTCCCCCGATGAGTTACCAC
CACAGTGTGGTACAGACCTGTGCTAACCTGTGAAACACGGTGATTTCTCA
AGCAATCAAGGAGTCTAGGTCTCATAATTTTGTCAGATACGCCCCTGTCT
GGGAAACCCAAGCTGCCAAATCCCATCCACCCAAAGCCATAGACAGCACC
ACCATCAACCAGAACAAATGTTTTCCTCTTTCTTGCACAAACCTGCACAG
CAAGCTGTCCCTTAAGGCTAATCAAGTGTTCAGGAAGAGTCTTATCGATC
TCATCTCCATGGCCTAATTCACCACAGTAACCTTTTCCCCAGGTATAAAC
ATATCCACTCGAATCAACTGCCACAACATGCTCATCACCAGCGGAGACAC
GAAGAACATGAACACCCTTTCTCTTAAATGTCTGGATTGCACGTGGCTGG
AATTCATTTTGCTGCTCCCCATGGCCAAGGCAAAAATTAGAACCAGAACC
AAATGAGTAGACTACTCCATTGTCAGTTACAGTTAAAACATAGCTTGGGC
CAGCAGCAATCTGAACTACAGAGCCAACTCTCTCAAGCAGTTCAACCGTT
TTGGGGGTTGGTCGGTCTTGAGTGTCACCATGACCCAACTGCCCATGTGT
GTTAGTTCCACATGTATAAACAAGCCCTTGTCTTGTAAGAAACACAGTAA
AATTCAGTCCAGCAGCAACCTGTTTACAAGGAATCCCCTTCATTGCTTCA
ACGAGCCTTGGTCTAAAGATGGGGCGGCCTGTATCTCTATGGCCACAACA
AAAAGATGAATTGTCTCCACATGTGAAAACCTCTCCAGACTGCAAAACAA
ATGCAGCATGATTCTGAGAGGCTGACACCTGGATCACATTAGCTAGAGAA
GGGAAGTTAATCCTCGTAAATGCTACACACTGTGTTGTTTCAGGACCATG
TCCAAGGACACCACACAAACTGGAACCACAAGAGTACACTGATGAATTCC
TAATTAGCAATGTGTGATACCTTCCAGTTGTTATCTGCATATTGCCTGCA
GAGGTTTGGACCATGTCCGACGATTGCTCTACTGATTGCAAGAACCTCAA
AAGTCGCTTCCAATTTCCATCACACCGTTCAAAAATGTCCCTTTGACTAC
TACAACTCATCCCTATATATATCCCATTCGTCATGCACAATTGAAACGCG
GCTAAATCAACCAGCGACCTGCATTTTGTGGGATAAACACCGTGACACCC
TCCGAATGTTCTCGAAGTCAGCTCCAGCGACACTAGGTCAACGGCACTTA
ACCGTTTACCGGTCGTTAAAATTTCCAAAATTAGATGCGACGGCAGATCG
TCAATCGAAAATAACCTACTCCGATCAGCCATTGAAAATTTTTTGATTTT
CTTTTAACTGGAAATGTAACGGATTTAGGGTTTCGATTTCTAAGAAAAAG
AAACAAGAGAAAAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II