g.arboreum_cottongen_reftransV1_0015403, g.arboreum_cottongen_reftransV1_0015403 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0015403
Unique Name	g.arboreum_cottongen_reftransV1_0015403
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1865

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr10	chromosome	g.arboreum_cottongen_reftransV1_0015403:1..1865 . Chr10:110992292..110997094 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A0B0P291_GOSAR (Putative E3 ubiquitin-protein ligase HERC3 OS=Gossypium arboreum GN=F383_03708 PE=4 SV=1)

HSP 1 Score: 1011.13 bits (2613), Expect = 0.000e+0
Identity = 493/500 (98.60%), Postives = 493/500 (98.60%), Query Frame = -3

Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEV-------FTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEV       FTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR
Sbjct:    1 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVSFNLAQVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 500

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A0D2U458_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G434600 PE=4 SV=1)

HSP 1 Score: 1009.98 bits (2610), Expect = 0.000e+0
Identity = 488/493 (98.99%), Postives = 492/493 (99.80%), Query Frame = -3

Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSIDDLPSHLILEILT+GKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGM+CSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPK VELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKG+HVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLR+HRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR
Sbjct:    1 MADRSRLFSIDDLPSHLILEILTSGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMNCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKMVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGIHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRDHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 493

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A061F837_THECC (Regulator of chromosome condensation (RCC1) family protein isoform 1 OS=Theobroma cacao GN=TCM_031382 PE=4 SV=1)

HSP 1 Score: 926.776 bits (2394), Expect = 0.000e+0
Identity = 441/493 (89.45%), Postives = 467/493 (94.73%), Query Frame = -3

Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MADRSRLFSI++LPSHLILEILT+G+RLSAVDLVSLELTSRTFGG HGVYPTK RSLVDLAAFQLC TN +Y GMS SSQR++F+RCDGNWKR+LRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFP  ANV+QVSAS NHAAF++QSGEVFTCGDNSSFCCGHRDT RPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQG +YTCGTNTHGQLGHGDTQD+PTPK VE L+ VGSVVQIAAGPSYVL VTDNG VYSFGSGSNFCLGHGEQ NEFQPRAIQTFKRKG+H+LRVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPEHLISLK QLAVQVCARKRKTFVLVDGG+VYGFGWMGFGSLGFPDR +SDK+MRPR+LD LR H V+Q+STGLYHTVVVTH+GRMFGFGDNERAQLGHDTLRGCLEPTEIFI EME+E TLLSESR
Sbjct:    1 MADRSRLFSIEELPSHLILEILTSGERLSAVDLVSLELTSRTFGGSHGVYPTKFRSLVDLAAFQLCATNEVYSGMSWSSQREVFDRCDGNWKRVLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPPPANVMQVSASHNHAAFIMQSGEVFTCGDNSSFCCGHRDTSRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGHLYTCGTNTHGQLGHGDTQDQPTPKMVEQLKGVGSVVQIAAGPSYVLAVTDNGAVYSFGSGSNFCLGHGEQHNEFQPRAIQTFKRKGIHILRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEHLISLKSQLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRSLSDKVMRPRILDSLRGHHVAQISTGLYHTVVVTHKGRMFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEETTLLSESR 493

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067G3D9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011268mg PE=4 SV=1)

HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0
Identity = 401/488 (82.17%), Postives = 441/488 (90.37%), Query Frame = -3

Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGNMQITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FTRINFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G V+TCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 487

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067K5D4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20964 PE=4 SV=1)

HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0
Identity = 397/491 (80.86%), Postives = 442/491 (90.02%), Query Frame = -3

Query:  310 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSE 1782
            MADR  L SI+DLPSHL+LEILTTG RLSA+DLV LELTS+TFGG HG+YP K +S+VD AAFQLC+++G+Y GM  ++Q+++F+RC GNWKR+LRFLQ+VE+SS MV+TSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCVAF RINFP L  V+QVSAS NHAAFV++SG+VFTCGDNSS CCGH+DT RPIFRPRLVEA KG+PCKQVAAGLNFTVFLTRQG VY+CGTNTHGQLGHGDT DRPTPK +E LE VGSVVQIAAGPSYVL VTDNG VYSFGSGSNFCLGHGEQ NEF PRAIQTF+RKG+HV+RVSAGDEH VA+DSSG+VYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVDGG VYGFGWMGFGSLGFPDR VSDK+MRPR+LD LR +RVSQ+STGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+ E+ D+  + SE
Sbjct:    1 MADRYTLVSIEDLPSHLVLEILTTG-RLSAIDLVCLELTSKTFGGSHGLYPHKFKSMVDFAAFQLCVSHGVYNGMGWNAQKELFDRCGGNWKRVLRFLQTVEESSSMVKTSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFNRINFPYLGRVVQVSASHNHAAFVMESGKVFTCGDNSSSCCGHQDTSRPIFRPRLVEAFKGVPCKQVAAGLNFTVFLTRQGHVYSCGTNTHGQLGHGDTLDRPTPKIIEALEGVGSVVQIAAGPSYVLAVTDNGTVYSFGSGSNFCLGHGEQHNEFLPRAIQTFRRKGIHVVRVSAGDEHAVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGRVYGFGWMGFGSLGFPDRRVSDKVMRPRILDSLRAYRVSQISTGLYHTVAVTSQGQIFGFGDNERAQLGHDTLRGCLEPTEIFVPELADDTDVASE 490

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: A0A067GFI1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011268mg PE=4 SV=1)

HSP 1 Score: 830.861 bits (2145), Expect = 0.000e+0
Identity = 401/489 (82.00%), Postives = 441/489 (90.18%), Query Frame = -3

Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGN-MQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGN MQITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FTRINFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G V+TCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 488

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: B9HZW9_POPTR (Regulator of chromosome condensation family protein OS=Populus trichocarpa GN=POPTR_0011s12250g PE=4 SV=2)

HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0
Identity = 396/493 (80.32%), Postives = 441/493 (89.45%), Query Frame = -3

Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MAD++R  SI+DLPSHLI EILTTG RLSAVDL  LELTSRTFGG HG+YP K RSLVD AA+QLC+++ +Y GM  ++Q+ +F RC+GNWKR+LRFLQ+VE+SS MV+TSA NMQ+TTGRYHTLLIR+SSVYSCGSSLCGVLGHG ETTQCVAFTRI FPSLA VIQVSAS NHAAFVLQSGEVFTCGDNSSFCCGH DT RPIFRPRLVEA+KG+PCKQVA GLNFTVFLTRQG +YTCGTNTHGQLGHGDTQDRPTPK +ELLE VGSVVQIAAGPSYVL VTDNGVVYSFGSGSN CLGHGEQ +EF+PRAIQTF+RK +HV+ VSAGDEH VA+DSSG+VY+WGKGYCG LGHGDEIDKTLP  +  LK  LAVQVCARKRKTFVLVDGG+VYGFGWMGFGSLGFPDRG+SDK+MRPR+LD LR   VSQ+STGLYHTVVVT++G+MFGFGDNERAQLGHDTLRGCL+PTEIF+ E  D+  L SE +
Sbjct:    1 MADKNRSVSIEDLPSHLIFEILTTG-RLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFAAYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIFVQETADDTGLASEGK 492

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: V4URR7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008120mg PE=4 SV=1)

HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0
Identity = 400/489 (81.80%), Postives = 439/489 (89.78%), Query Frame = -3

Query:  319 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNM-QITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATL 1782
            MADR RLFSI++LPSHLI EILT+G RLSAVDL  LELTS+TFGG HG+YP K RSLVDLAA QLC  + IY GMS + Q ++  RC+GNWKR+LRFLQSVE SSD+V+TSAGN  QITTGRYHTLLI NSSV+SCGSSLCGVLGHGPETTQCV+FT INFPS A+V+QVSAS+NHAAFVLQSG+VFTCGDNSSFCCGHRDT RPIFRPRLVEA+KG+PCKQV AGLNFT FLT +G VYTCG+NTHGQLGHGDT DRPTPK++  LE VGSVVQIAAGPSY+L VT NGVVYSFGSGSNFCLGHGEQ +E QPRAIQTF+RKG+HV+RVSAGDEHVVA+DSSGYVYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDRGVSDK++RPR+LD LR H VSQ+STGLYHTVVVT RGR+FGFGDNERAQLGHDTLRGCLEPTEIFI EME++  L
Sbjct:    1 MADRYRLFSIEELPSHLIFEILTSG-RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQKQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTSINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVYTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGL 488

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: B9SRF4_RICCO (Ran GTPase binding protein, putative OS=Ricinus communis GN=RCOM_1126130 PE=4 SV=1)

HSP 1 Score: 825.854 bits (2132), Expect = 0.000e+0
Identity = 392/493 (79.51%), Postives = 438/493 (88.84%), Query Frame = -3

Query:  304 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSESR 1782
            MAD+ RL SID+LPSHLILEIL TG RLSA DLV LELTS+TFGG HG+YP K +SLVD AAFQLC ++ +Y GM  ++Q+++ +RC GNWKR+LRFL +VE+SS MV+TSAGNMQITTGRYHTLLI NSSVYSCGSSLCGVLGHGPETTQCV+F+RI FPSLA V+QVSAS NHAA++L+SGEVFTCGDNSSFCCGH+DT RPIFRPR VEA+KG+PCKQVAAGLNFTVFLTR G VY+CGTNTHGQLGHGDT DRPTPK +E  E +GSV QIAAGPSYVL VTD+GVVYSFGSGSNFCLGHGEQ NEF PRAIQTF+RK +HV+RVSAGDEHVVA+DSSG+VYTWGKGYCG LGHGDEIDKTLPE L SLK  LAVQVCARKRKTFVLVDGG V+GFGWMGFGSLGFPDRGVSDK+MRPR+LD LR HRVSQ+STGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+ E   +  + SES 
Sbjct:    1 MADKYRLVSIDELPSHLILEILMTG-RLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFAAFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEIFLQEFGHDTGITSESE 492

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Match: W9R900_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025664 PE=4 SV=1)

HSP 1 Score: 812.757 bits (2098), Expect = 0.000e+0
Identity = 392/492 (79.67%), Postives = 435/492 (88.41%), Query Frame = -3

Query:  307 MADRSRLFSIDDLPSHLILEILTTGKRLSAVDLVSLELTSRTFGGCHGVYPTKCRSLVDLAAFQLCMTNGIYIGMSCSSQRDIFERCDGNWKRLLRFLQSVEQSSDMVQTSAGNMQITTGRYHTLLIRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHEMEDEATLLSES 1782
            M +R R  SID+LPSHLILEIL++G  LSAVDLV LELTSRTFGG HG+YP K RSLVDLAAFQLC+++ IY  +S ++QR++ +RCDGNWKR+LRFL SVEQSSD+V+TSAGNMQITTG+YHT LI NSSVYSCGSSLCGVLGHG ETTQCV F+RI+FPSLA+V+QVSAS NHAAFV+QSGEVFTCGDNSS CCGH+DT RPIFRPRLVEA+KG+ CKQVAAGLNFTVFLTRQG V+TCG NTHGQLGHGD  DR TPK +ELLE  GSVVQI+AGPSYVL VTDNG VYSFGSGSNFCLGHGEQQ EFQPR IQ F+RKG+HV+RVSAGDEHVVA+DSSG VYTWGKGYCG LGHGDEIDKT PE L SLK  LAVQVCARKRKTFVLVD G+VYGFGWMGFGSLGFPDR  SDK+ RPR+LDCL+ H VSQ+STGLYHTV VT+RGR+FGFGDNERAQLGHDTLRGCLEP EIF+ EM D+  +L ES
Sbjct:    1 MTERYRPVSIDELPSHLILEILSSGG-LSAVDLVCLELTSRTFGGSHGLYPQKFRSLVDLAAFQLCVSHSIYSCLSRNAQRELCDRCDGNWKRVLRFLLSVEQSSDIVETSAGNMQITTGKYHTFLISNSSVYSCGSSLCGVLGHGSETTQCVTFSRISFPSLAHVVQVSASHNHAAFVMQSGEVFTCGDNSSSCCGHKDTSRPIFRPRLVEALKGVHCKQVAAGLNFTVFLTRQGHVFTCGMNTHGQLGHGDAIDRRTPKIIELLEGAGSVVQISAGPSYVLAVTDNGEVYSFGSGSNFCLGHGEQQAEFQPRIIQAFRRKGIHVVRVSAGDEHVVALDSSGCVYTWGKGYCGALGHGDEIDKTKPELLSSLKSDLAVQVCARKRKTFVLVDSGSVYGFGWMGFGSLGFPDRRASDKVTRPRILDCLKAHHVSQISTGLYHTVAVTNRGRIFGFGDNERAQLGHDTLRGCLEPKEIFVQEMADDFGVLQES 491

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: HERC6_HUMAN (Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.425e-27
Identity = 82/247 (33.20%), Postives = 126/247 (51.01%), Query Frame = -3

Query:  388 QVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGE-QQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEI-DKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGH 1122
            Q A+G   ++ L     V +CG N+ GQLG    Q    P+ ++ LE +  V  ++ G  + L V   G V+++G+GS   LG GE ++  F P+ I T     + +++VS G  H +A+     V++WGK   G+LG G E   +  P+ + SL+G    QV A    +F L   G  +G+G    G L    R V  +  +P  +  L+N  V  +S G  HT V+T  G++F FGDN   QLG+
Sbjct:   27 QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLN--DIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270

HSP 2 Score: 98.9821 bits (245), Expect = 3.854e-20
Identity = 79/299 (26.42%), Postives = 149/299 (49.83%), Query Frame = -3

Query:  415 ANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRP-TPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQ-QNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGEL---GHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTH-RGRMFGFG 1293
            A ++Q ++ + H+  +L +  V +CGDNS    G R   R    P  ++A++ +    V+ G   ++ +  +G V+  G  + GQLG G+ ++   TPK +  L  +  ++Q++ G  + L ++ +  V+S+G  S+  LG G++  ++  P+ +++   +G+ + +V+AG  H  A+   G  + WG    G+L   G    +    P  + +LK    V +      T VL   G V+ FG    G LG+     + +   P+L++ + +  VSQ+  G YHT+   H  G++  FG
Sbjct:   23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY---SPTPEKRGPQLVERI-DGLVSQIDCGSYHTLAYVHTTGQVVSFG 313

HSP 3 Score: 86.2705 bits (212), Expect = 4.371e-16
Identity = 79/299 (26.42%), Postives = 131/299 (43.81%), Query Frame = -3

Query:  580 MQITTGRYHTLLI-RNSSVYSCGSSLCGVLGHG-------PETTQCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG-DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCL---GHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFG 1440
            +Q  +G  H+LL+  N  V SCG +  G LG         PE  Q +    ++         VS  + H+  V   G VF  G  S    G  +     F P+ +  +  I   QV+ G   ++ L++   V++ G N+HGQLG G +   + +P+ V  LE +  + Q+AAG ++   ++  G  + +GS S   L   G        +P ++   K  G  V+ +S GD H   +   G V+T+G    G+LG+    +K  P+ +  + G ++   C        +   G V  FG
Sbjct:   26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLG--VVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT1_MOUSE (RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.879e-25
Identity = 74/258 (28.68%), Postives = 126/258 (48.84%), Query Frame = -3

Query:  340 NFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1104
            N  +++T    V+  G N    LG GD Q    PK +E L  +++ S+    +GP +VL  T++GVVY++G      LG+G       P  + T       V+ V+ G  H +A+ + G ++ WG   CG++G G   ++  P  + + L  +  V +   +  +  ++D G VYG+G+ G G LG  + G     + P  +  L    V+Q+  G  HT+ +T  G ++ +G N   QLG  +    L PT+I + +
Sbjct:   32 NEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEK 283

HSP 2 Score: 100.523 bits (249), Expect = 5.521e-21
Identity = 78/288 (27.08%), Postives = 133/288 (46.18%), Query Frame = -3

Query:  415 SQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQ-GLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVST--GLYHTVVVTHRGRMFGFG 1269
            S N A +V  + EVF  G N S C G  D  +    P+ +EA+ G   K ++ G    V LT + G+VY  G N + QLG+G T     P  V     +  V+++A G  + + +  +G ++++G  +   +G G   N+  PR +         V+ ++ G    +AV  SG VY WG    G+LG G+  ++  P  + +L G    Q+      T  L D G +Y +G   +G LG    G  + ++ P  +  +   RV +++     + +   T  G ++ +G
Sbjct:   30 SANEAIYVTDNDEVFVFGLNYSNCLGTGDN-QSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQI-MVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RPGR_CANFA (X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris GN=RPGR PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.077e-23
Identity = 85/300 (28.33%), Postives = 146/300 (48.67%), Query Frame = -3

Query:  391 VSASQNHAAFVLQSGEVFTCGDNS--SFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDE--IDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1278
            +S    H A V  + +++  G N+      G + T   + +P  V+A+K    K  A G N T+  T  G VY  G N  GQLG GDT++R T   +        + Q++AG +    +T++G ++ +G  S   +G     N   P+ +      G  +  +S G  H   V + G +YT+G+  CG+LG  ++  ++  +P+ +  + G++ VQV      T VL +  AVY FG   FG LG         +  P+ ++ +++ ++S ++ G  HT ++T  G M+ FGD    +LG
Sbjct:   40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTE-KAVYTFGLGQFGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328

HSP 2 Score: 79.337 bits (194), Expect = 5.269e-14
Identity = 77/245 (31.43%), Postives = 120/245 (48.98%), Query Frame = -3

Query:  706 GRYHTLL-IRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINF-PSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQ--DRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQ-PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHG 1425
            GR HTL+      VY+ G +  G LG G +T +   F  I+F  S   + Q+SA  N +A + + GE+F  GDNS    G  +    +  P+ V    G P   ++ G   + F+T +G +YT G    G+LG  +    +   P+ V  +   G VVQ+A G  + + +T+   VY+FG G    LG G    E   P+AI+  K + +    ++ G+ H   +   G +YT+G G  G+LG G
Sbjct:   95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGI--PGKVVQVACGGGHTVVLTEK-AVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISF--IACGENHTALITDMGLMYTFGDGRHGKLGLG 330

HSP 3 Score: 58.9214 bits (141), Expect = 1.307e-7
Identity = 42/153 (27.45%), Postives = 71/153 (46.41%), Query Frame = -3

Query:  346 VSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHR-VSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 798
            +S GDEH   V  +  +Y +G    G+LG G +   + P  + +LK + +    C R   T V  +GG VY  G    G LG    G +++     L+    + R + Q+S G   +  +T  G +F +GDN   Q+G + +     P ++ +
Sbjct:   40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH-TLVSTEGGKVYAAGGNNEGQLGL---GDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV 188

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: NEK9_XENLA (Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.865e-23
Identity = 86/275 (31.27%), Postives = 125/275 (45.45%), Query Frame = -3

Query:  391 PRLVEAMKG-IPCKQVAAGLNFTVFLTRQGLVYTC-----GTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNE--FQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPD--RGVSDK--------IMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1161
            P+ ++  KG    +QV AG      +T +  +YT      G+  HGQLGHGD      PK VE L+   SV +++ G  + + +TD G +YSFGS    CLG  +       +P  +  F  + V   +VS GD H++A+  S  VY+WG G  G LG   E D   P+ +   +G   V VC     +F+L   G V   G      LG      G+ +              L   L  +++  +S G  HT  +  RGR+  FG N+  QLG
Sbjct:  341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612

HSP 2 Score: 72.4034 bits (176), Expect = 7.092e-12
Identity = 89/342 (26.02%), Postives = 148/342 (43.27%), Query Frame = -3

Query:  436 GSSLCGVLGHGPETT--QCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCG-HRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGP--SYVLTVTDNGVVYSFGSGSNFCLGHGE------QQNEFQPRAIQT----FKRKGVHVLR-VSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLI--SLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGF-PDRGVSDKIMRPRLLDCLRN---------HRVSQVSTGLYHTVVVTHR 1377
            GS L G LGHG   +  Q     ++   S   V +VS   +    +   G++++ G +   C G ++  G  +  P LV+     P  QV+ G +  + LTR   VY+ G   +G+LG     D  +P+ VE ++R   +V +  G   S++LT+T  G V + G   +  LG  +          FQ     T     K+   + +R +S G  H  A+D  G + T+G   CG+LG GD   K L  +L+   L G+  ++V      T        ++ +G  G G L   P+        RP+  D   +         H V+ +S   +HT+++  +
Sbjct:  381 GSKLHGQLGHGDRASYRQPKHVEKLQGKS---VQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVE-VQRGLCIVNVCCGSDGSFLLTLT--GKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNE-------RPQGSDICTSWPRPIFGSLHHVTDLSCRGWHTILIVEK 708

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT1_HUMAN (RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.692e-22
Identity = 73/256 (28.52%), Postives = 123/256 (48.05%), Query Frame = -3

Query:  340 TVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1098
             +++T    V+  G N    LG GD Q    PK +E L  +++ S+    +GP +VL  T++GVVY++G      LG+G       P  + T       V+ V+ G  H +A+ + G V+ WG   CG++G G   ++  P  + + L  +  V +   +  +  ++D G VYG+G+ G G LG  + G     + P  +  L +  V+Q+  G  HT+ +T  G ++ +G N   QLG       L P  I + +
Sbjct:   34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEK 283

HSP 2 Score: 93.2041 bits (230), Expect = 1.523e-18
Identity = 65/228 (28.51%), Postives = 104/228 (45.61%), Query Frame = -3

Query:  580 HAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLA-VQVCARKRKTFVLVDGGAVYGFG 1260
            H     + G V+  G N     G+  T + I   ++   +      +VA G + ++ L   G V+  G N  GQ+G G T ++PTP+ V     +  VV IA G +  + V DNG VY +G   N  LG G   N+  P  ++      V V ++  G  H +A+   G +Y WG    G+LG G++ +   P H++  K ++  +  C     +     GG VY +G
Sbjct:   86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311

HSP 3 Score: 92.8189 bits (229), Expect = 1.692e-18
Identity = 83/309 (26.86%), Postives = 134/309 (43.37%), Query Frame = -3

Query:  364 SQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFL-TRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQT---FKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRG---RMFGFGDNERAQLGHDTLRGCLE 1269
            S + A +V  + EVF  G N S C G  D  +    P+ +E + G   K ++ G    V L T  G+VY  G N + QLG+G T     P  V     +  VV++A G  + + +  +G V+++G  +   +G G   N+  PR +      KR    V+ ++ G    +AV  +G VY WG    G+LG G+  ++  P  + +L      Q+      T  L D G +Y +G   +G LG    G  + ++ P  +   +   V   +    HT     +G    M+G    +   L H T   C +
Sbjct:   30 SASEALYVTDNDEVFVFGLNYSNCLGTGDN-QSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 330

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RPGR_HUMAN (X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens GN=RPGR PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.896e-22
Identity = 86/300 (28.67%), Postives = 143/300 (47.67%), Query Frame = -3

Query:  391 IQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEI--DKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1284
            + +S    H+A V  + +++  G N+    G   +   I +P  V+A+K    K  A G N T+  T  G VY  G N  GQLG GDT++R T   +        + Q++AG +    +T++G ++ +G  S   +G     N   P+ +      G  V  +S G  H   V + G +Y +G+   G+LG  +++  +   P+ L+S   +  +QV      T VL +  AVY FG   FG LG        +   P++++ +R+  +S +S G  HT ++T  G M+ FGD    +LG
Sbjct:   38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQ-LVSEIPEKVIQVACGGEHTVVLTE-NAVYTFGLGQFGQLGLGTFLF--ETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328

HSP 2 Score: 64.6994 bits (156), Expect = 2.018e-9
Identity = 51/196 (26.02%), Postives = 84/196 (42.86%), Query Frame = -3

Query:  346 VTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 930
            + D+G V++FG            +++F       F  K    + +S GDEH   V  +  +Y +G    G+LG G +   + P  + +LK + + +  C R   T V  +GG VY  G    G LG  D    +             H++ Q+S G   +  +T  GR+F +GDN   Q+G   +     P ++ I
Sbjct:    8 MPDSGAVFTFG------------KSKFAENNPGKFWFKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNH-TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI 188

HSP 3 Score: 57.7658 bits (138), Expect = 3.041e-7
Identity = 75/260 (28.85%), Postives = 110/260 (42.31%), Query Frame = -3

Query:  820 GRYHTLL-IRNSSVYSCGSSLCGVLGHGPETTQCVAFTRINF-PSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCGHRDT-----------GRPIF----------------------RP---------------RLVEAMKGIPCK--QVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHG----DTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQ--NEFQPRAIQTFKR 1425
            GR HTL+     +VY+ G +  G LG G +T +   F  I+F  S   + Q+SA  N +A + + G +F  GDNS    G ++            G+P+                        P               R  + +  IP K  QVA G   TV LT +  VYT G    GQLG G    +T +   PK +E + R  ++  I+ G ++   +TD G++Y+FG G +  LG G +   N F P     F R
Sbjct:   95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLT-ENAVYTFGLGQFGQLGLGTFLFETSE---PKVIENI-RDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLR 348

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT2_MOUSE (RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.263e-22
Identity = 83/288 (28.82%), Postives = 139/288 (48.26%), Query Frame = -3

Query:  340 DTGR-PIFRPRLVEAMKGI--PCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1185
            D G+ PIF     E ++ I   C   +AG N  ++ T    ++  GTN  G LG GD Q    P+ ++ L  +++ S+    +GP  VL  TD G V+++G  +   LG+G   +   P  I T       V+ V+ G  H + + S G V+ WG    G++G G   ++ +P  +   L+ ++ + +   +  +  +VD G VY +G+ G G LG    G S     P  +  L+  RV +V+ G  HT+V+T  G+++ +G N   QLG         PT + + +
Sbjct:   27 DVGKWPIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASL-SYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGL---GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307

HSP 2 Score: 101.679 bits (252), Expect = 3.222e-21
Identity = 75/275 (27.27%), Postives = 123/275 (44.73%), Query Frame = -3

Query:  580 NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVS-ASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFG 1398
            N  ++  G++  G LG G +    +   R++  +   +  +S  S  H       GEVFT G N+    G+  T   +    +   +      +VA G   ++ LT  G V+  G N  GQ+G G T ++P P+ V    +   V+ IA G    + V D G VY +G   N  LG G   N  QP   +    +G+ V RV+ G  H + +   G +Y WG    G+LG G++ +++ P  ++  K + + +  C     +     GG VY +G
Sbjct:   64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335

HSP 3 Score: 94.3597 bits (233), Expect = 6.503e-19
Identity = 68/237 (28.69%), Postives = 111/237 (46.84%), Query Frame = -3

Query:  556 NHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN-FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLG 1263
            N   +   + E+F  G N S C G  D    I  PR ++++ G     ++ G     V  T  G V+T G N + QLG+G T     P  +        V+++A G  + L +T +G V+++G  ++  +G G   N+  PR +    +  V V+ ++ G    +AV  +G VY WG    G+LG G   ++  P  + +L+G    +V      T VL D G +Y +G   +G LG
Sbjct:   56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: NEK9_MOUSE (Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.093e-22
Identity = 86/276 (31.16%), Postives = 126/276 (45.65%), Query Frame = -3

Query:  391 PRLVEAMK-GIPCKQVAAGLNFTVFLTRQGLVYTC-----GTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNE--FQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRP-----------RLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1161
            P+ ++ +K G   +QV AG      +T +  +YT      GT  HGQLGHGD      PK VE L+   ++ Q++ G  + + VTD G +Y+FGS    C+G  +       +P  +  F    V   +VS GD HVV +  +  VY+WG G  G LG   E D   P+ +   K  + V V      TF+L   G V   G   F  LG  ++ +S  I               L   L  +++  ++ G  HT  +  RGR+  FG N+  QLG
Sbjct:  359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630

HSP 2 Score: 75.0998 bits (183), Expect = 1.022e-12
Identity = 50/172 (29.07%), Postives = 80/172 (46.51%), Query Frame = -3

Query:  346 PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTW-----GKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 846
            P+ +   K  G    +V AG+ H   V     +YTW     G    G+LGHGD+     P+H+  L+G+   QV      T  + D G +Y FG   +G +G  D+    +++ P  L+   ++ V QVS G  H VV+T    ++ +G  E  +LG D+      P  + +
Sbjct:  359 PQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528

HSP 3 Score: 73.9442 bits (180), Expect = 2.682e-12
Identity = 88/382 (23.04%), Postives = 157/382 (41.10%), Query Frame = -3

Query:  436 QSVEQSSDMVQTSAGNMQITTGRYHTLLIR-NSSVYSC-----GSSLCGVLGHGPETT--QCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCG-HRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFG------SGSNFCL----GHGEQQNEFQPRAIQTFKRKGVHVLR-VSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLI--SLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRN---------HRVSQVSTGLYHTVVVTHR 1488
            +S  Q  D++++     Q+  G  H  ++     +Y+      G+ L G LGHG + +  Q     ++   ++    QVS   +    V   G+++  G +   C G  + +G  +  P  +      P +QV+ G N  V LTR   VY+ G   +G+LG    +D  TP+ V++ + +  +V +  G      +T +G V + G       G N C+     H          +    K+   + +R ++ G  H  A+D  G + T+G   CG+LG G+   K L  +L+   L G+  ++V      T    D   ++ +G  G G L            RP   D   +         H V  +S   +HT+++  +
Sbjct:  356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIH---QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKAL-IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-YKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM------TPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 726

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: NEK9_HUMAN (Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.422e-22
Identity = 86/276 (31.16%), Postives = 126/276 (45.65%), Query Frame = -3

Query:  391 PRLVEAMK-GIPCKQVAAGLNFTVFLTRQGLVYTC-----GTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNE--FQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRP-----------RLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLG 1161
            P+ ++ +K G   +QV AG      +T +  +YT      GT  HGQLGHGD      PK VE L+   ++ Q++ G  + + VTD G +Y+FGS    C+G  +       +P  +  F    V   +VS GD HVV +  +  VY+WG G  G LG   E D   P+ +   K  + V V      TF+L   G V   G   F  LG  ++ +S  I               L   L  +++  ++ G  HT  +  RGR+  FG N+  QLG
Sbjct:  359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630

HSP 2 Score: 76.6406 bits (187), Expect = 3.270e-13
Identity = 50/172 (29.07%), Postives = 81/172 (47.09%), Query Frame = -3

Query:  346 PRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTW-----GKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFI 846
            P+ +   K  G    +V AG+ H   V     +YTW     G    G+LGHGD+     P+H+  L+G+   QV      T  + D G +Y FG   +G +G  D+    +++ P  L+   ++ V QVS G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct:  359 PQKLDVIK-SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528

HSP 3 Score: 73.559 bits (179), Expect = 3.045e-12
Identity = 88/382 (23.04%), Postives = 156/382 (40.84%), Query Frame = -3

Query:  436 QSVEQSSDMVQTSAGNMQITTGRYHTLLIR-NSSVYSC-----GSSLCGVLGHGPETT--QCVAFTRINFPSLANVIQVSASQNHAAFVLQSGEVFTCGDNSSFCCG-HRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFG------SGSNFCL----GHGEQQNEFQPRAIQTFKRKGVHVLR-VSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLI--SLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRN---------HRVSQVSTGLYHTVVVTHR 1488
            +S  Q  D++++     Q+  G  H  ++     +Y+      G+ L G LGHG + +  Q     ++   ++    QVS   +    V   G+++  G +   C G  +  G  +  P  +      P +QV+ G N  V LTR   VY+ G   +G+LG    +D  TP+ V++ + +  +V +  G      +T +G V + G       G N C+     H          +    K+   + +R ++ G  H  A+D  G + T+G   CG+LG G+   K L  +L+   L G+  ++V      T    D   ++ +G  G G L            RP   D   +         H V  +S   +HT+++  +
Sbjct:  356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIR---QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKAL-IIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGN-YKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAM------TPTERPHGSDICTSWPRPIFGSLHHVPDLSCRGWHTILIVEK 726

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Match: RCBT2_RAT (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.694e-22
Identity = 83/288 (28.82%), Postives = 138/288 (47.92%), Query Frame = -3

Query:  340 DTGR-PIFRPRLVEAMKGI--PCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELL--ERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLIS-LKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLGFPDRGVSDKIMRPRLLDCLRNHRVSQVSTGLYHTVVVTHRGRMFGFGDNERAQLGHDTLRGCLEPTEIFIHE 1185
            D G+ PIF     E ++ I   C    AG N  ++ T    ++  GTN  G LG GD Q    P+ ++ L  +++ S+    +GP  VL  TD G V+++G  +   LG+G   +   P  I T       V+ V+ G  H + + S G V+ WG    G++G G   ++ +P  +   L+ ++ + +   +  +  +VD G VY +G+ G G LG    G S     P  +  L+  RV +V+ G  HT+V+T  G+++ +G N   QLG         PT + + +
Sbjct:   27 DVGKWPIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASL-SYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGL---GSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307

HSP 2 Score: 100.523 bits (249), Expect = 5.986e-21
Identity = 75/275 (27.27%), Postives = 123/275 (44.73%), Query Frame = -3

Query:  580 NSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPSLANVIQVS-ASQNHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQ-LAVQVCARKRKTFVLVDGGAVYGFG 1398
            N  ++  G++  G LG G +    +   R++  +   +  +S  S  H       GEVFT G N+    G+  T   +    +   +      +VA G   ++ LT  G V+  G N  GQ+G G T ++P P+ V    +   V+ IA G    + V D G VY +G   N  LG G   N  QP   +    +G+ V RV+ G  H + +   G +Y WG    G+LG G++ +++ P  ++  K + + +  C     +     GG VY +G
Sbjct:   64 NDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335

HSP 3 Score: 94.3597 bits (233), Expect = 6.677e-19
Identity = 75/275 (27.27%), Postives = 122/275 (44.36%), Query Frame = -3

Query:  466 NHAAFVLQSGEVFTCGDNSSFCCGHRDTGRPIFRPRLVEAMKGIPCKQVAAGLN-FTVFLTRQGLVYTCGTNTHGQLGHGDTQDRPTPKTVELLERVGSVVQIAAGPSYVLTVTDNGVVYSFGSGSNFCLGHGEQQNEFQPRAIQTFKRKGVHVLRVSAGDEHVVAVDSSGYVYTWGKGYCGELGHGDEIDKTLPEHLISLKGQLAVQVCARKRKTFVLVDGGAVYGFGWMGFGSLG--------FPDRGVSDKIMRPRLLDCLRNHRVSQVSTG 1263
            N   +   + E+F  G N S C G  D    I  PR ++++ G     ++ G     V  T  G V+T G N + QLG+G T     P  +        V+++A G  + L +T +G V+++G  ++  +G G   N+  PR +    +  V V+ ++ G    +AV  +G VY WG    G+LG G   ++  P  + +L+G    +V      T VL D G +Y +G   +G LG        +P   V +K     +  C   H  +  S G
Sbjct:   56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQG 328

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0P291_GOSAR	0.000e+0	98.60	Putative E3 ubiquitin-protein ligase HERC3 OS=Goss...	[more]
A0A0D2U458_GOSRA	0.000e+0	98.99	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061F837_THECC	0.000e+0	89.45	Regulator of chromosome condensation (RCC1) family...	[more]
A0A067G3D9_CITSI	0.000e+0	82.17	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067K5D4_JATCU	0.000e+0	80.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A067GFI1_CITSI	0.000e+0	82.00	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
B9HZW9_POPTR	0.000e+0	80.32	Regulator of chromosome condensation family protei...	[more]
V4URR7_9ROSI	0.000e+0	81.80	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
B9SRF4_RICCO	0.000e+0	79.51	Ran GTPase binding protein, putative OS=Ricinus co...	[more]
W9R900_9ROSA	0.000e+0	79.67	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0015403 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
HERC6_HUMAN	1.425e-27	33.20	Probable E3 ubiquitin-protein ligase HERC6 OS=Homo...	[more]
RCBT1_MOUSE	4.879e-25	28.68	RCC1 and BTB domain-containing protein 1 OS=Mus mu...	[more]
RPGR_CANFA	1.077e-23	28.33	X-linked retinitis pigmentosa GTPase regulator OS=...	[more]
NEK9_XENLA	6.865e-23	31.27	Serine/threonine-protein kinase Nek9 OS=Xenopus la...	[more]
RCBT1_HUMAN	1.692e-22	28.52	RCC1 and BTB domain-containing protein 1 OS=Homo s...	[more]
RPGR_HUMAN	1.896e-22	28.67	X-linked retinitis pigmentosa GTPase regulator OS=...	[more]
RCBT2_MOUSE	2.263e-22	28.82	RCC1 and BTB domain-containing protein 2 OS=Mus mu...	[more]
NEK9_MOUSE	3.093e-22	31.16	Serine/threonine-protein kinase Nek9 OS=Mus muscul...	[more]
NEK9_HUMAN	3.422e-22	31.16	Serine/threonine-protein kinase Nek9 OS=Homo sapie...	[more]
RCBT2_RAT	3.694e-22	28.82	RCC1 and BTB domain-containing protein 2 OS=Rattus...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 326..339 score: 29.76 coord: 452..466 score: 33.33 coord: 345..361 score: 35.29 coord: 436..452 score: 29.41 coord: 290..306 score: 44.12
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 182..232 e-value: 2.3E-6 score: 28.0 coord: 342..383 e-value: 4.0E-6 score: 27.2 coord: 288..339 e-value: 3.0E-10 score: 40.4 coord: 236..283 e-value: 2.0E-12 score: 47.4
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 117..127
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 436..446
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 289..342 score: 14.082
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 395..449 score: 11.991
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 236..288 score: 14.705
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 343..394 score: 11.429
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 183..235 score: 9.378
None	No IPR available	PFAM	PF13540	RCC1_2	coord: 433..461 e-value: 7.8E-6 score: 25.4
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 1..493
None	No IPR available	PANTHER	PTHR22870:SF209	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13	coord: 1..493
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 116..265 e-value: 3.7E-39 score: 134.0
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 271..470 e-value: 2.1E-39 score: 134.8
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 125..483

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0015403 ID=g.arboreum_cottongen_reftransV1_0015403; Name=g.arboreum_cottongen_reftransV1_0015403; organism=Gossypium arboreum; type=contig; length=1865bp
GAATTATGATTATTTGCAGATTGCAAGAGAAGAATTGGGCAATAAAGAAC
AAAGCAATCTTCTGAACTCGAATAAGTAAAACTTAACAACAAACATGGAT
AGAAGCAGGGGAAAAGCAACTATCACGGCCTACATATGAAACTTTATAAA
ATATAACAGTCAGCATCCAGAATGCGGAGTTAAAAATTCATACAATTCTA
CAAGAATTTTAATGAGGGATAAACGGTGTTTCACCTCTCAAGTAGGAACA
CAAGACGGTCGTCACTGATCTCCATAAAAGCAGACGCAATTCATTGCATT
TCATCTGCTTTCTGAAAGAAGAGTTGCTTCATCTTCCATTTCATGAATAA
AAATCTCTGTAGGTTCAAGGCAACCTCTCAGTGTGTCATGACCAAGTTGT
GCTCGTTCGTTGTCTCCAAACCCGAACATCCTCCCCCGATGAGTTACCAC
CACAGTGTGGTACAGACCTGTGCTAACCTGTGAAACACGGTGATTTCTCA
AGCAATCAAGGAGTCTAGGTCTCATAATTTTGTCAGATACGCCCCTGTCT
GGGAAACCCAAGCTGCCAAATCCCATCCACCCAAAGCCATAGACAGCACC
ACCATCAACCAGAACAAATGTTTTCCTCTTTCTTGCACAAACCTGCACAG
CAAGCTGTCCCTTAAGGCTAATCAAGTGTTCAGGAAGAGTCTTATCGATC
TCATCTCCATGGCCTAATTCACCACAGTAACCTTTTCCCCAGGTATAAAC
ATATCCACTCGAATCAACTGCCACAACATGCTCATCACCAGCGGAGACAC
GAAGAACATGAACACCCTTTCTCTTAAATGTCTGGATTGCACGTGGCTGG
AATTCATTTTGCTGCTCCCCATGGCCAAGGCAAAAATTAGAACCAGAACC
AAATGAGTAGACTACTCCATTGTCAGTTACAGTTAAAACATAGCTTGGGC
CAGCAGCAATCTGAACTACAGAGCCAACTCTCTCAAGCAGTTCAACCGTT
TTGGGGGTTGGTCGGTCTTGAGTGTCACCATGACCCAACTGCCCATGTGT
GTTAGTTCCACATGTATAAACAAGCCCTTGTCTTGTAAGAAACACAGTAA
AATTCAGTCCAGCAGCAACCTGTTTACAAGGAATCCCCTTCATTGCTTCA
ACGAGCCTTGGTCTAAAGATGGGGCGGCCTGTATCTCTATGGCCACAACA
AAAAGATGAATTGTCTCCACATGTGAAAACCTCTCCAGACTGCAAAACAA
ATGCAGCATGATTCTGAGAGGCTGACACCTGGATCACATTAGCTAGAGAA
GGGAAGTTAATCCTCGTAAATGCTACACACTGTGTTGTTTCAGGACCATG
TCCAAGGACACCACACAAACTGGAACCACAAGAGTACACTGATGAATTCC
TAATTAGCAATGTGTGATACCTTCCAGTTGTTATCTGCATATTGCCTGCA
GAGGTTTGGACCATGTCCGACGATTGCTCTACTGATTGCAAGAACCTCAA
AAGTCGCTTCCAATTTCCATCACACCGTTCAAAAATGTCCCTTTGACTAC
TACAACTCATCCCTATATATATCCCATTCGTCATGCACAATTGAAACGCG
GCTAAATCAACCAGCGACCTGCATTTTGTGGGATAAACACCGTGACACCC
TCCGAATGTTCTCGAAGTCAGCTCCAGCGACACTAGGTCAACGGCACTTA
ACCGTTTACCGGTCGTTAAAATTTCCAAAATTAGATGCGACGGCAGATCG
TCAATCGAAAATAACCTACTCCGATCAGCCATTGAAAATTTTTTGATTTT
CTTTTAACTGGAAATGTAACGGATTTAGGGTTTCGATTTCTAAGAAAAAG
AAACAAGAGAAAAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000408	Reg_chr_condens
IPR009091	RCC1/BLIP-II

Search form

g.arboreum_cottongen_reftransV1_0015403, g.arboreum_cottongen_reftransV1_0015403 (contig) Gossypium arboreum

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