g.arboreum_cottongen_reftransV1_0013122, g.arboreum_cottongen_reftransV1_0013122 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: U5L2F8_GOSHI (MADS box protein MADS52 OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 377.481 bits (968), Expect = 2.613e-127 Identity = 187/228 (82.02%), Postives = 200/228 (87.72%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHDG----TNDLRLA 996 MGRGKIEIK+IENATNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSSTGKFHEF+SPNISTK FFDLYQKTTG DLW SHYE+M+ENYRRLKEINKK RREIRQRMGGDL +LNIKELQALEAKMDSSL+AIR+RKYHVIKTQTD H+KKVRNLEE HANL+ DLE KLD QDGIVE+ GYY NGASNL+ALRLYQ P LVLH G +NDLRLA Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSTGKFHEFISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKSRREIRQRMGGDLDDLNIKELQALEAKMDSSLVAIRDRKYHVIKTQTDTHRKKVRNLEEGHANLVFDLETKLDQQDGIVESEGYYNEA----ANGASNLHALRLYQIHHPNLVLHHGGRFDSNDLRLA 224
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: D9IUY4_GOSHI (MADS protein OS=Gossypium hirsutum GN=MADS9 PE=2 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 5.173e-126 Identity = 188/234 (80.34%), Postives = 201/234 (85.90%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKK------VRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHDG----TNDLRLA 996 MGRGKIEIK+IENATNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSSTGKFHEF+SPNISTK FFDLYQKTTG DLW SHYE+M+ENYRRLKEINKK RREIRQRMGGDL +LNIKELQALEAKMDSSL+AIR+RKYHVIKTQTD H+KK VRNLEERHANL+ DLE KLD QDGIVE+ GYY NGASNL+ALRLYQ P LVLH G +NDLRLA Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSTGKFHEFISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKSRREIRQRMGGDLDDLNIKELQALEAKMDSSLVAIRDRKYHVIKTQTDTHRKKDWNALQVRNLEERHANLVFDLETKLDQQDGIVESEGYYNEA----ANGASNLHALRLYQIHHPNLVLHHGGRFDSNDLRLA 230
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A0D2RAQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G064900 PE=4 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.598e-125 Identity = 186/228 (81.58%), Postives = 199/228 (87.28%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD----GTNDLRLA 996 MGRGKIEIK+IENATNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSSTGKFHEF+SPNISTK FFDLYQKTTG DLW SHYE+M+ENYRRLKEINKKLRREIRQRMGGDL +LNIKELQALE KMDSSL+AIR+RKYHVIKTQTD H+KKVRNLEERHANL+ DL LD QDGIVE+ GYY NGASNL+ALRLYQ P LVLH G+NDLRLA Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSTGKFHEFISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKLRREIRQRMGGDLDDLNIKELQALETKMDSSLVAIRDRKYHVIKTQTDTHRKKVRNLEERHANLVFDL---LDQQDGIVESEGYYNEA----ANGASNLHALRLYQIHHPNLVLHHGGRFGSNDLRLA 221
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A061DLS5_THECC (Floral homeotic protein DEFICIENS, putative isoform 3 OS=Theobroma cacao GN=TCM_000266 PE=4 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 9.630e-123 Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD---GTNDLRLA 996 MGRGKIEIKKIEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSS+GKFHEF+SPNISTK FFDLYQKT GIDLW+SHYE+M+ENYRRLKEIN +LRREIRQR+G DL +LNIKELQALEAKM SSL A+R+RKYHVIKTQTD +KKKVRNLE+RHANL++DLEAKL +DGIVE YYES+MG L NGASNLYALRL+QN Q L+ H G NDLRLA Sbjct: 1 MGRGKIEIKKIENTTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSSGKFHEFISPNISTKTFFDLYQKTLGIDLWSSHYEKMQENYRRLKEINNRLRREIRQRIGEDLDDLNIKELQALEAKMASSLEAVRQRKYHVIKTQTDTYKKKVRNLEQRHANLVLDLEAKL--EDGIVENEAYYESSMG-LANGASNLYALRLHQNHQVNLLHHGGRFGPNDLRLA 224
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A0D2PPX7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G064900 PE=4 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 1.242e-122 Identity = 188/257 (73.15%), Postives = 201/257 (78.21%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKK-----------------------------VRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD----GTNDLRLA 996 MGRGKIEIK+IENATNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSSTGKFHEF+SPNISTK FFDLYQKTTG DLW SHYE+M+ENYRRLKEINKKLRREIRQRMGGDL +LNIKELQALE KMDSSL+AIR+RKYHVIKTQTD H+KK VRNLEERHANL+ DLE KLD QDGIVE+ GYY NGASNL+ALRLYQ P LVLH G+NDLRLA Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSTGKFHEFISPNISTKAFFDLYQKTTGTDLWISHYEKMQENYRRLKEINKKLRREIRQRMGGDLDDLNIKELQALETKMDSSLVAIRDRKYHVIKTQTDTHRKKVSESNTIKTVACHSISRVLIIFEDWNALQVRNLEERHANLVFDLETKLDQQDGIVESEGYYNEA----ANGASNLHALRLYQIHHPNLVLHHGGRFGSNDLRLA 253
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A061DFV0_THECC (Floral homeotic protein DEFICIENS, putative isoform 2 OS=Theobroma cacao GN=TCM_000266 PE=4 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 5.646e-121 Identity = 183/228 (80.26%), Postives = 202/228 (88.60%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREI-RQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD---GTNDLRLA 996 MGRGKIEIKKIEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSS+GKFHEF+SPNISTK FFDLYQKT GIDLW+SHYE+M+ENYRRLKEIN +LRREI RQR+G DL +LNIKELQALEAKM SSL A+R+RKYHVIKTQTD +KKKVRNLE+RHANL++DLEAKL +DGIVE YYES+MG L NGASNLYALRL+QN Q L+ H G NDLRLA Sbjct: 1 MGRGKIEIKKIENTTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSSGKFHEFISPNISTKTFFDLYQKTLGIDLWSSHYEKMQENYRRLKEINNRLRREISRQRIGEDLDDLNIKELQALEAKMASSLEAVRQRKYHVIKTQTDTYKKKVRNLEQRHANLVLDLEAKL--EDGIVENEAYYESSMG-LANGASNLYALRLHQNHQVNLLHHGGRFGPNDLRLA 225
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A061DGS8_THECC (K-box region and MADS-box transcription factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000266 PE=4 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 2.063e-119 Identity = 183/238 (76.89%), Postives = 202/238 (84.87%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREI-----------RQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD---GTNDLRLA 996 MGRGKIEIKKIEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFSS+GKFHEF+SPNISTK FFDLYQKT GIDLW+SHYE+M+ENYRRLKEIN +LRREI RQR+G DL +LNIKELQALEAKM SSL A+R+RKYHVIKTQTD +KKKVRNLE+RHANL++DLEAKL +DGIVE YYES+MG L NGASNLYALRL+QN Q L+ H G NDLRLA Sbjct: 1 MGRGKIEIKKIENTTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSSGKFHEFISPNISTKTFFDLYQKTLGIDLWSSHYEKMQENYRRLKEINNRLRREISKVDQGMYAFSRQRIGEDLDDLNIKELQALEAKMASSLEAVRQRKYHVIKTQTDTYKKKVRNLEQRHANLVLDLEAKL--EDGIVENEAYYESSMG-LANGASNLYALRLHQNHQVNLLHHGGRFGPNDLRLA 235
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: Q003J2_VITVI (Flowering-related B-class MADS-box protein OS=Vitis vinifera GN=TM6 PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 6.616e-101 Identity = 158/228 (69.30%), Postives = 187/228 (82.02%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQD-GIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD---GTNDLRLA 996 MGRGKIEIK+IEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFS+TGKFHE+ SP I+TK +D YQKT GIDLW+SHYERM+EN R+LKEIN KLRREIRQRMG DL +L+I++L+ LE KMD+SL +RERKYHVIKTQT+ ++KKVRNLEE+H NL+++ EAK D G+VE G YES + NGASNLYA RL+Q P + HD G++DLRLA Sbjct: 1 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYTSPTITTKKVYDQYQKTLGIDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLRGLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLLLNFEAKCDDPHYGLVENDGDYESAVA-FANGASNLYAFRLHQAH--PNLHHDGGYGSHDLRLA 225
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: F6GWR1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g02820 PE=4 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 8.241e-100 Identity = 158/228 (69.30%), Postives = 187/228 (82.02%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQD-GIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHD---GTNDLRLA 996 MGRGKIEIK+IEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFS+TGKFHE+ SP I+TK +D YQKT GIDLW+SHYERM+EN R+LKEIN KLRREIRQRMG DL +L+I++L+ LE KMD+SL +RERKYHVIKTQT+ ++KKVRNLEE+H NL+++ EAK D G+VE G YES + NGASNLYA RL+Q P + HD G++DLRLA Sbjct: 82 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYTSPTITTKKVYDQYQKTLGIDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIEDLRGLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLLLNFEAKCDDPHYGLVENDGDYESAVA-FANGASNLYAFRLHQAH--PNLHHDGGYGSHDLRLA 306
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Match: A0A067FUM1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027470mg PE=4 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 3.700e-94 Identity = 148/230 (64.35%), Postives = 178/230 (77.39%), Query Frame = -1 Query: 325 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLDGQD-GIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHDGT-----NDLRLA 996 MGRGKIEIK+IEN TNRQVTYSKRRNG+FKKAQELTVLCDAKVSLIMFS+TGKFHE++SP +TK FD YQK+ G+DLW++HY +M+E+YR+LKEIN KLR++IRQRMG DL +L +EL+ LE M SS +RERK+HVIKTQTD +KKKVRNLEERH N+++D E K D G+V+ G Y+S M L NGASNLYA R+ Q LH GT +DL LA Sbjct: 1 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYISPTTTTKKMFDQYQKSLGVDLWSTHYAKMQESYRKLKEINNKLRKDIRQRMGEDLDDLTFEELRGLEQNMSSSAATVRERKFHVIKTQTDTYKKKVRNLEERHGNILLDFETKYDDPHYGLVDNGD-YQSAMA-LANGASNLYAFRMQQQN-----LHQGTGGYGSSDLTLA 223
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.280e-31 Identity = 78/203 (38.42%), Postives = 112/203 (55.17%), Query Frame = -1 Query: 442 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNIS------TKGFFDLYQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANLIMDLEAKLD------------GQDGIVETGGYY 996 MGRG++E+K+IEN NRQVT+SKRRNGL KKA EL+VLCDA+V+LI+FSS GK +EF S I+ ++ + S Y M +LK + L+R R +G DL L++KELQ LE +++ +L R+RK ++ Q ++ ++K R L E + L LE + Q +VE G Y Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMS----KLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAY 199
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 2.941e-31 Identity = 85/242 (35.12%), Postives = 133/242 (54.96%), Query Frame = -1 Query: 319 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLY----------QKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDK-HKKKV----RNLE-ERHANLIMDLEAKLDGQDGIVETGGYYESTMGLLPNGASNLYALRLYQNQQPPLVLHDGTNDLRLA*C 996 MGRGKI I++I+N+T+RQVT+SKRRNGL KKA+EL++LCDA+V L++FSSTG+ +EF S N+ T D Y T+ I +W + + L+E +K+L MG +LS L +++LQ LE +++ SL IR RK +++K++ ++ H K N+E R N++ + +L + E G ++ +S Y+ R+ QN P L + R C Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKT--VIDRYTNAKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQL-------MGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMSQQKLELYNKLQACEQRGATDAN-----ESSSTPYSFRIIQNANMPPSLELSQSQQREGEC 228
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.449e-31 Identity = 70/165 (42.42%), Postives = 103/165 (62.42%), Query Frame = -1 Query: 535 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKT-----------TGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKV 996 MGRGKIEIK+I+NAT+RQVT+SKRR+GLFKKA+EL++LCDA+V L++FSST + ++F S S K + Y +T + LW + + L+E + RQ +G LS L++++LQ LE+K++ SL IR RK +V+ Q + +KV Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS--SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAASLRQQLHNLQEYH-------RQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKV 156
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.206e-30 Identity = 73/151 (48.34%), Postives = 101/151 (66.89%), Query Frame = -1 Query: 559 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDLYQKTT--GIDLWNSHYERMEENYR---RLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQ 996 MGRG++E+K+IEN NRQVT++KRRNGL KKA EL+VLCDA+VSLI+FS+ GK +EF S + K + YQK + I++ N + +E +YR +LK + L+R+ R +G DL LN KEL+ LE ++D SL +R IKTQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLK-TLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVR-----CIKTQ 145
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 3.003e-30 Identity = 82/222 (36.94%), Postives = 123/222 (55.41%), Query Frame = -1 Query: 361 MGRGKIEIKKIENATNRQVTYSKRRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFLSPNISTKGFFDL------YQKTTGIDLWNSHYERMEENYRRLKEINKKLRREIRQRMGGDLSELNIKELQALEAKMDSSLLAIRERKYHVIKTQTDKHKKKVRNLEERHANL---IMDLEAKLDGQDGIVETG-GYYESTMGLLPNGASNLYALRLYQNQQPPL 996 MGRGKIEIK+IEN+TNRQVT+SKRR G+ KKA+E+ VLCDA+V +++FSS GK ++ +P +T F L YQ +G LW+ ++ + R+K+ N ++ E+R G DL+ L KEL A+E +++ +R++ + HK+ + LE+ H L + E +L G GI E GY+ AS + R+ Q P L Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPK-TTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSG--GIRELELGYHHDDRDF---AASMPFTFRV-QPSHPNL 211 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013122 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013122 ID=g.arboreum_cottongen_reftransV1_0013122; Name=g.arboreum_cottongen_reftransV1_0013122; organism=Gossypium arboreum; type=contig; length=1122bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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