g.arboreum_cottongen_reftransV1_0015832, g.arboreum_cottongen_reftransV1_0015832 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: B9SU84_RICCO (Exonuclease, putative OS=Ricinus communis GN=RCOM_0570820 PE=4 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 1.822e-107 Identity = 209/394 (53.05%), Postives = 265/394 (67.26%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAF------DCNNIEPAKFQN-----SVETTDNSRQASCFVVFSSHKTREKRKTG------TMSMKQVVVSTESKYFKDA-GLEKLAFPVKAGPKNEN-MVLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKLEIS-NQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKRGQNDKLKSSNCNRSG--TKNTILNFFARV 1117 FKMDR+GNGEE+VL KV+++V+ KPSF++FD+ELFTGMCVLAGCDFLPSVPGIGIVKAHS V KYRNLDRVLSVLK+EKG+QMPEDY+KSF+EALAVFQHARIYDA R+L H+KPL++ LL LDE LDFLGP++P SVA+AIAEG L+PT MEAF +C++ +P QN +E SRQ + FV S+ KT +K TG ++ MKQ V TE KY +A L+KL P + K E MVL++ PLK+P NNPF + E VS + E+ C D + DNS EI +Q S+ +Q V+E E E L + SQESV+SKP ++ ++RG+N+K KSS +RSG +NTILNFF+ V Sbjct: 191 FKMDRFGNGEEIVLDKVYNAVACKPSFQHFDRELFTGMCVLAGCDFLPSVPGIGIVKAHSFVVKYRNLDRVLSVLKLEKGNQMPEDYSKSFREALAVFQHARIYDATTRKLIHLKPLSQNLLDSLDEKLDFLGPELPSSVAIAIAEGNLNPTNMEAFNIFPSSECHH-DPIVIQNPFEQQKLEDAVMSRQKNSFVARST-KTAKKDVTGKLFSPLSIVMKQDPVITERKYVNEALALQKLVLPQEIHLKVEKEMVLQDIPLKIP-NNPFMIKSSPESVLDVS---DYERSNTLCSTPDSNPQKVADNSFCKKRKINEIDLHQKESMDDQTSEVTE-EISEILFVAKESQESVNSKPIKIPEVKRRGKNEKTKSSK-HRSGESKQNTILNFFSPV 576
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: M5WYY2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020678mg PE=4 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 4.165e-106 Identity = 201/398 (50.50%), Postives = 258/398 (64.82%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDC-----NNIEPAKFQN-----SVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKD-AGLEKLAFPVKAGPKNENMVLEET------PLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDN---SSLSDAGKLEISNQIV-----SIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKRGQNDKLKSSNCNRSGTKN-TILNFFARV 1117 FKMD+YGNGEE+VL VF+ V PSF+NFD+ELFTGMCVLAGCDFLPSV GIGI KA++LVSKYRNLDR LSVLK +KG+QMPEDY K FKEA+AVFQHA+I+DAE +++KH+K + E L+Q LD LDFLGP++PPSVA AIAEG LDP M+AFD ++ EP K QN ET + + SCFV F SHK+R K TG KQ VS E+KY + A L KL P N+ LE T PLKV +NNPFKKRK D ++ + SK + E D ++ P N +++ + N I+ SI E++ +V+E+E + LC+ SQESV+SK + ++ +N+KLK S+ SG KN +ILNFF+RV Sbjct: 189 FKMDQYGNGEEMVLENVFNPVGRTPSFQNFDQELFTGMCVLAGCDFLPSVHGIGIAKAYALVSKYRNLDRALSVLKSQKGNQMPEDYPKCFKEAVAVFQHAQIFDAEKKKVKHMKAIPENLVQSLDGELDFLGPEMPPSVATAIAEGNLDPINMKAFDHFPASRHHQEPIKSQNIGQIQRPETAVVAAEDSCFVSFPSHKSRRKDSTGPTG-KQNPVSNENKYLNESAALAKLIV-----PSTNNVTLESTIAPNTIPLKVRHNNPFKKRKDDVHSDQMGSKTKQVSSEAEVEISDTLNVS-PSNIKTKVVNNVPSRKRKNDIILEHVESIGEEVSVVTEIESTDILCVTPESQESVNSKLPK---GKRIVKNEKLKRSSFKSSGNKNSSILNFFSRV 576
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: A0A067L1M9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03614 PE=4 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 8.940e-105 Identity = 200/387 (51.68%), Postives = 247/387 (63.82%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD------CNNIEPAKFQNSV-----ETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDA-GLEKLAFPVKAGPKNENMVL-EETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKLEIS-NQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKRGQNDKLKSSNCNRSGTK-NTILNFFARV 1117 FKMDRYGNGEE+VL KVFD+ + KPSF+ F+KELF GMCVLAGCDFLPSVPGIGIVKAHS VSKYRNLDRVLSVLK+EKGSQMPEDY+KSFKEALAVFQHARIYDAE ++L+H+KPL + LL LD LDFLGP++PPSVA AIAEG L+P+ MEAFD C +P QN E+T SR+ CF+ SS M+M + V TE KY +A L+KL P + E +VL +E PLK+P NNPF TE S E++ + C D NS ++EI +Q S EQ V +VE + + SQESV+S+P ++ + R + +K K +C + K NTILNFF+RV Sbjct: 191 FKMDRYGNGEEMVLDKVFDAGACKPSFKYFNKELFIGMCVLAGCDFLPSVPGIGIVKAHSYVSKYRNLDRVLSVLKLEKGSQMPEDYSKSFKEALAVFQHARIYDAETKKLRHMKPLPQNLLDSLDGQLDFLGPELPPSVATAIAEGNLNPSNMEAFDYFPSSECQP-DPIVIQNPCMLQKDESTVVSRRKGCFISISSR----------MAMNEDPVVTERKYINEAITLQKLIMPQEILSSTEKVVLPDEAPLKIP-NNPF---AIKSTTEARSVVLENDNSNLLCSTPDRDPSNDSGNSPSKKRKQIEIDLHQKESTDEQASEVIDVE----MYVTKESQESVNSRPRKISNRKVRSKFEKPKKCDCKTADNKQNTILNFFSRV 558
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: A0A059D0K1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00858 PE=4 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 1.022e-96 Identity = 188/394 (47.72%), Postives = 243/394 (61.68%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCN---------NIEPAKFQ-NSVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDAG-LEKLAFPVK-AGPKNENMVLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKL--------EISNQIV-SIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKRG-QNDKLKSSNCNRSGTKNTILNFFARV 1117 FKMDRYGNGEE++L KVFDS +S PSF+NFD LFTGMCVLAGCDFLPSVPGIGI KA+SLVSKYRN+DR LSVLK+EKG+QMPE Y+K F EA+AVFQHARIYD ++L+H++PL+E+LLQ LD LDFLGP +PPS+A+AIAEG++DP+ MEAFD + +I PA Q E T S + CF V S+ E K +MK+ + E K+ +A L +L P + +G V E +K+PNNNPFK RK ++ K DE + + DS + SL + K +I N + +++EV C + SQESV+S PN E K+ Q K+K SNC S + TILN+F+RV Sbjct: 191 FKMDRYGNGEEMLLQKVFDSTTSTPSFKNFDMALFTGMCVLAGCDFLPSVPGIGIKKAYSLVSKYRNIDRALSVLKLEKGNQMPEYYSKIFHEAVAVFQHARIYDTITKKLRHMRPLSEKLLQALDGELDFLGPDVPPSIAIAIAEGRVDPSNMEAFDTHQTSGCHVPIDIIPASRQLWQDEATALSAEKDCFFVNISN---EYMKADFTAMKEELNLQERKFSNEAAVLSRLMLPPETSGDVGSVAVSESMSVKIPNNNPFKIRKVGKIHLSPVKKSSDEVSLLIDVEELDSLSPSSNEVSLDMSEKNRYMKRKWDQIGNDLKDGDTGHRSVLTEVGNSGIFCSALASQESVTSTPNFNTSENKQARQTKKVKRSNCKGSENRTTILNYFSRV 581
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: A0A068TR00_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_2 OS=Coffea canephora GN=GSCOC_T00022451001 PE=4 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.086e-94 Identity = 176/386 (45.60%), Postives = 228/386 (59.07%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAF---------DCNNIEPAKFQNSVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDA-GLEKLAFPVKAGPKNENMVL--EETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKLEISNQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKRGQNDKL--KSSNCNRSGTKNTILNFFARV 1117 FKMDRYGNG+E++L KV S PSFRNFDK LFTGMCVLAGCDFLPS+PGIGIVKAHSLVSKYRNLDRVLSVLK EKGSQ+PE Y+KSF+EA+AVF HA IYDA +++LKH+KP+ E LL+ DE LDFLGP++P S+A AIAEG L+P TMEAF + N+ E S + CF +S K+R+ K G S K+ A LEKL P+ + E++++ +E P K+P NNPFKKR +++ + H +S + +Q+ +++E E E L SQ+SV SKP + E +K +SSNC+ S K++ILNFF+RV Sbjct: 191 FKMDRYGNGQEIILDKVLGSSDRVPSFRNFDKNLFTGMCVLAGCDFLPSIPGIGIVKAHSLVSKYRNLDRVLSVLKFEKGSQVPEQYSKSFREAVAVFHHAHIYDAALKQLKHMKPIPEDLLKSFDEELDFLGPEMPQSIATAIAEGNLNPCTMEAFSYFPSSSQANSTNLVRCDRLKKQEKRSLSSEDGCFAAVTSCKSRKDEKRGKFSASHAPFVVGRKHIDGAVELEKLKLPLMNDCEEESIIIIQKEVP-KLPENNPFKKRNMEDI----------------LLKHTESTI------------------------KQVSVLTETESSEMLYPTPDSQQSVDSKPVKTTEEDTSVHREKKMKRSSNCHSSVQKSSILNFFSRV 535
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: V7C719_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G151700g PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 3.053e-92 Identity = 181/402 (45.02%), Postives = 243/402 (60.45%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD---CNN--IEPAKFQN-----SVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDA-GLEKLAFPVKA-GPKNENMVLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDDSQLTFPDN-------SSLSDAGKLE--ISNQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRV---------YIERKRGQNDKLKSSNCNRSGTKNTILNFFARV 1117 FKMDR+GNGE++ L KVF + S KPSFR+F+KELFTGMCVLAGCDFLPSVPGIGI +AH+LVSKYRNLDR+LSVLK+EK QMPEDY K+F+EA+AVFQHARIYD +ELKH+KPL + L+ LD LDFLGP+IPPS+ IAEG L+P+T +AFD C+ + P Q+ E SR + F + +S TRE + E KY +A LEKL P++ G + + ++ + TPLKVP+NNPF+ RK +E + +K EK+ + T PDN + S K + +S+++ + + + V+E E C+ +C+ S ESV+S + + R N K SN NR T+LNFF+RV Sbjct: 191 FKMDRHGNGEKIELEKVFSAESGKPSFRSFNKELFTGMCVLAGCDFLPSVPGIGIARAHALVSKYRNLDRILSVLKLEKADQMPEDYAKTFQEAVAVFQHARIYDTNAKELKHMKPLPQNFLESLDGKLDFLGPQIPPSIVKGIAEGNLNPSTKKAFDKSECSRFPLHPTDLQSFDQIQKAEVPAPSRLKNSFSIIASQYTRENSTVTRL-------LDEEKYSNEALALEKLIKPLETIGTEEKTIISDNTPLKVPDNNPFRIRKNEERYQ---TKDTIEKIVVESSMEYIDLCTSPDNFQKEGSDENHSRKRKFQNILSDKVEASEDLVSGVTEAEKCDVVCLT-ESPESVTSGTKMIAHLKGKSESKKKSNRRSNSKKTGSNTNR-----TLLNFFSRV 576
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: A0A0A0LVU6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042690 PE=4 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.020e-91 Identity = 190/393 (48.35%), Postives = 246/393 (62.60%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAF------DCNN---IEPAKFQNSVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDAGLEKLAFPVKAGPKNE-NMVLEETPLKVPNNNPFKKRKFDEMT--------ELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKLEISNQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERKR--GQNDKLKSSNCNRSGT-KNTILNFFARV 1117 FKMDRYGNGEE++L K+FDS PSF++FDKEL TGMCVLAGCDFLPSVPGIGI +A++LVSKYRNL+R LS LK++K QMPEDY K F++A+AVFQHA+IYDAE R+L +KPL +LLQ L E +DFLGP +PPS+AV+IAEG+L+P TMEAF +CN I+ + E + S + SCF+V K RE R +K V +SK +D LEKL P NE VL +K P+NNPFK+RK DE+ E VS EDE +S D+ + L++A +++Q + E I V++ E L + SQ+SV+SK + I RKR G+ +K KS N SG KN+ILNFF+RV Sbjct: 191 FKMDRYGNGEEMMLDKIFDSAGCTPSFKDFDKELLTGMCVLAGCDFLPSVPGIGIARAYALVSKYRNLERALSALKLQKKEQMPEDYFKLFRQAMAVFQHAKIYDAETRKLIPMKPLPLELLQVLGEEIDFLGPDMPPSIAVSIAEGRLNPVTMEAFNYFSSEECNQDLIIKNKEILPRTEKAEVSEEESCFMVVG--KDRE-RHIPDKKIKPVAGYKKSK--EDFALEKLITPSSVPRTNEVKPVLNYKSIKTPDNNPFKRRKVDELPLEPTQRVDEEVSVVSEDECALLSSATSDNLISKSSNKRKLNEA----LTDQKDNAIEHISGVTQEEDLVLLELPPESQKSVNSKASSA-IGRKRVVGKENKGKS---NSSGIPKNSILNFFSRV 570
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: A0A072TGL8_MEDTR (5'-3' exonuclease family protein OS=Medicago truncatula GN=MTR_0110s0050 PE=4 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 2.170e-91 Identity = 175/361 (48.48%), Postives = 230/361 (63.71%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD---CNN-----IEPAKF-QNSVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDA-GLEKLAFPVKAGPKNENM----VLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMSCIFHDD--------SQLTFPDNSSLSDAGKLEISN----QIVSIAEQILMVSEVECCETLCINMGSQESVSSK 1006 FKMDR GNGE + L KVF + S KPSF++F+ +LFTGMCVLAGCDFLPSVPGIG+ +AH+LVSKYRN+DR+LSVLK+EKG QMPEDY KSFK+ALAVF+HARIYD +ELKH+KPL E L+ LDE L+FLGP+IP ++ AIAEG L+P+T EAFD C+ I+P Q +Q +CF +F S T K T++ +S + KY + L+KL P++ NE M +ET LKVPNNNPF+ RK +E LV + E+ E+S + + S + F + S++ K + N ++ EQ+ V+EVE C+ LC+NM SQESV SK Sbjct: 191 FKMDREGNGERIELEKVFSAESCKPSFQSFNMKLFTGMCVLAGCDFLPSVPGIGVARAHALVSKYRNIDRILSVLKLEKGDQMPEDYAKSFKDALAVFEHARIYDINTKELKHMKPLPESFLESLDEDLNFLGPEIPSTIVKAIAEGNLNPSTKEAFDKSECSRLPLHPIDPHTIGQLKKSEVPTIKQDNCFSIFGSQNT---NKNCTVTR----LSDKDKYSNEVTALQKLIMPLET---NETMTKPFTFDETHLKVPNNNPFRIRKHEEEISLV--QKEETMEEISIVSSGEYIDLNDYMSPINFQEEGSINLLKKRKFENVCLDKVEVTDEQVSGVTEVENCDGLCLNMESQESVKSK 539
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: I1KJ36_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 2.397e-91 Identity = 179/395 (45.32%), Postives = 246/395 (62.28%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD---CNN--IEPAKFQN-----SVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYFKDA-GLEKLAFPV-KAGPKNENMVLEETPLKVPNNNPFKKRKFDEMTELVSSKGEDEKLEMS--------CIFHDDSQLTFPDNSSLSDAGKLEISNQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRVYIERK-RGQNDKL-KSSNCNRSGTKN-TILNFFARV 1117 FKMDR+GNGE + L KVF + S +PSFR+F+ +L TGMCVLAGCDFLPSVPGIGI +AH+LVSKYRNLDR+LSVLKIEKG QMPEDY KSF+EA+AVF+HA+IYD +ELKH+ PL E L LD DFLGP+IPPS+ AIAEG L+P+T +AFD C+ ++P Q+ E SRQ S F + +SH TRE +S K KY +A L KL P+ G + + ++ + TPLK P+NNPF+ RK +E T +K +K+ + C+ DD + +N S + S+++ + E V+EVE + C+ + S ES++S + + K R +++K K SN ++G+ N T+L+FF+RV Sbjct: 191 FKMDRHGNGERIELEKVFSAESGRPSFRSFNMKLLTGMCVLAGCDFLPSVPGIGIARAHALVSKYRNLDRILSVLKIEKGDQMPEDYAKSFQEAVAVFEHAQIYDVNSKELKHMNPLPENFLGSLDGKFDFLGPEIPPSIVTAIAEGNLNPSTKKAFDKSECSRFPLQPIDLQSIDQVRKAEVPAPSRQGSSFSIITSHYTRESNAVARLSDKD-------KYSNEALALHKLIMPLGNNGTEEKTIISDFTPLKFPDNNPFRIRK-NEGT--YQTKDTVQKVSFASNMGYTDLCMSPDDFEEKGSENLSRKRKFQNFCSDKVEATDELFSGVTEVEKSDIPCMAVESPESINSDQTKKIADLKGRSESNKQSKRSNSKKTGSNNITLLSFFSRV 575
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Match: W9RTG5_9ROSA (Exonuclease 1 OS=Morus notabilis GN=L484_017398 PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 5.378e-90 Identity = 169/347 (48.70%), Postives = 217/347 (62.54%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEPAKFQNSVETTDNSRQASCFVVFSSHKTREKRKTGTMSMKQVVVSTESKYF-KDAGLEKLAFPVKAGPKNENMVLEETPLKVPNNNPFKKRKFDE-----MTELVSSKGEDEKLEMSCIFHDDSQLTFPDNSSLSDAGKLE--ISNQIVSIAEQILMVSEVECCETLCINMGSQESVSSKPNRV 1018 FKMDR+GNGEE++L VFDS S PSFRNFD EL TGMCVLAGCDFLPSVPGIGIVK+H+LVSKY NLDRVLSVLK+EK +QMPE Y KSF+EALAVFQHA IYD +I++LKH++PL E LL+ LD LDFLGP+IPPSVA+AIAEG +DP +MEAFD + SS + ++ S KQ + E K K L+KL P + + PLKVP+NNPFK+RKFD+ + VS + E L+ S I + + + +S K+E ++ + EQ +V++ E E LC+ SQESV+SK +++ Sbjct: 180 FKMDRFGNGEEILLHNVFDSASCTPSFRNFDNELLTGMCVLAGCDFLPSVPGIGIVKSHALVSKYLNLDRVLSVLKLEKRNQMPEGYPKSFREALAVFQHALIYDLDIKKLKHMRPLPEMLLESLDGNLDFLGPEIPPSVAIAIAEGNVDPISMEAFDRYS-------------------------SSRRLQDPPVKIQTSEKQNPIPNEKKCINKVEALQKLIMPSTIREAVQTKTVTNVPLKVPDNNPFKRRKFDQNHVDQIGSQVSCSTQVEDLDNSAISNSTNIYQEVRKNGVSRKRKIEEVTLYEVEKVGEQNSVVTKEENSEVLCLVSESQESVNSKASKI 501
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_ARATH (Exonuclease 1 OS=Arabidopsis thaliana GN=EXO1 PE=2 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 4.040e-29 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEP 493 FKMD++G+G E SK+ + S F ++ MC+L+GCD+L S+PG+G+ +AH+L++K+++ DRV+ LK S +P Y +SFK AL F+H R+YD ++ H+ +++ L E DF+GP +P +A IA G+LDP T F ++ P Sbjct: 184 FKMDKFGHGVEFQASKL--PKNKDLSLSGFSSQMLLEMCILSGCDYLQSLPGMGLKRAHALITKFKSYDRVIKHLKYSTVS-VPPLYEESFKRALLTFKHQRVYDPNAEDIIHLCDISDN----LGEDSDFVGPSMPQDIAKGIALGQLDPFTQLPFQAESVTP 340
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_ORYSJ (Exonuclease 1 OS=Oryza sativa subsp. japonica GN=EXO1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.548e-26 Identity = 55/158 (34.81%), Postives = 94/158 (59.49%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD 475 FKMD++G G E ++++ + F ++ MC+L+GCD+LPS+PG+G+ +AH+L+ K + ++V+ L+ S +P Y ++F++A+ FQ R+YD ++ H+ + E LDFLGP +P +VA IA+G +DP T E F+ Sbjct: 184 FKMDKFGQGVEFHITRL--QRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAHALIQKLKGHEKVIKHLRYSAVS-VPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG----SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFE 334
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_DICDI (Exonuclease 1 OS=Dictyostelium discoideum GN=exo1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.360e-19 Identity = 56/183 (30.60%), Postives = 94/183 (51.37%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQL-LQYLDEG------------------------LDFLGPKIPPSVAVAIAEGKLDPTTMEAFD 475 FKMD+YG +E+ + F +F++ + MC+L+GCD+LPS+ G+G+ + L+ ++R++++V LK EK S ++Y + F +A F+H R++D R L + PL + ++L++ LDF+GP I +A IA G +DP T E FD Sbjct: 184 FKMDKYGYAQEIKTEDLGSCKKDGYDFIDFNQTMLRQMCILSGCDYLPSLSGMGLKTSFKLLKQHRDIEKVFKYLKREK-SNFSQEYEQQFYKADFTFKHQRVFDPVSRILTTLLPLPTIIDSRFLNDNNNNTNDGDSNGDGSSGGSGSGGGFLDFIGPVIDDEIAEKIALGIIDPETHEQFD 365
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_XENLA (Exonuclease 1 OS=Xenopus laevis GN=exo1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.325e-14 Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKI----EKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIE-PAKFQNSVETTDNSR 535 KMD++GNG E+ ++ F S F +E F MC+L+GCD+LPS+ GIG+ KA L+ N D + KI + +PE Y + F A F + ++D R+L + P + E L++ GP + SVA+ IA G +D T + D N + P + ++ DN + Sbjct: 184 LKMDKFGNGLEIDQAR-FGMCRSLGDV--FTEEKFRYMCILSGCDYLPSIHGIGLAKACKLLKVANNPDITKVIQKIGQYLKTNITVPEGYIEGFLRANNTFLYQLVFDPVERKLIPLNPYGNDV---NPEELNYAGPNMGDSVALQIALGNMDINTRKQIDDYNPDIPQLSHHRSQSWDNKQ 360
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_HUMAN (Exonuclease 1 OS=Homo sapiens GN=EXO1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.147e-12 Identity = 67/213 (31.46%), Postives = 95/213 (44.60%), Query Frame = 2 Query: 2 FKMDRYGNGEE-----LVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQM----PEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEPA--KFQNSVETTDNSRQASCFVVFSSHKTREKR-KTGTMS 604 KMD++GNG E L + + V F +E F MC+L+GCD+L S+ GIG+ KA ++ N D V + KI +M PEDY F A F + ++D R+L PL E L + G + S+A+ IA G D T E D N + A S D + Q S V H+ R ++GT+S Sbjct: 184 LKMDQFGNGLEIDQARLGMCRQLGDV--------FTEEKFRYMCILSGCDYLSSLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKL---IPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKTCQKSANVSSIWHRNYSPRPESGTVS 385
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_MOUSE (Exonuclease 1 OS=Mus musculus GN=Exo1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.704e-12 Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 2 Query: 2 FKMDRYGNGEE-----LVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQM----PEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD 475 KMD++GNG E L + K V F +E F MC+L+GCD+L S+ GIG+ KA ++ N D V + KI +M PEDY F A F + ++D R+L PL E L + G + SVA+ IA G D T E D Sbjct: 184 LKMDQFGNGLEVDQARLGMCKQLGDV--------FTEEKFRYMCILSGCDYLASLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLRMNITVPEDYITGFIRANNTFLYQLVFDPIQRKL---VPLNAYGDDVNPETLTYAGQYVGDSVALQIALGNRDVNTFEQID 339
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_SCHPO (Exodeoxyribonuclease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=exo1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.280e-11 Identity = 48/174 (27.59%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEPAKFQNSVETT 523 FKMD +GN + + D +++ E M + +GCD+ V G+G+ A + KY + ++++K ++P + K F A F+H R+Y + + L H+ P +L + D F+G +A+ IAEG+ +P T AFD I+ + Q+ +TT Sbjct: 184 FKMDGFGN---CITIRRNDIANAQDLNLRLPIEKLRHMAIFSGCDYTDGVAGMGLKTALRYLQKYPEPRAAIRAMRLDKSLKVPVSFEKEFALADLAFRHQRVYCPKDKTLVHLSPPERELSVHEDA---FIGSFFDNQLAIDIAEGRSNPITKCAFD---IKDSSMQSFTKTT 348
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_DROME (Exonuclease 1 OS=Drosophila melanogaster GN=tos PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.209e-11 Identity = 57/204 (27.94%), Postives = 97/204 (47.55%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRNFDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIE-----KGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLT--EQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFDCNNIEPAKFQNSVETTDNSRQASCFVV-FSSHKTREKRK 589 FK+D G+G + K+ ++ +FDK F MC+L+GCD+L S+PGIG+ KA + K D +++ KI + ++ +DY ++F +A A F+H IY+ R ++ + L E +Y L A+ +A G L+P +M+ D + P K + + S+ S + F S T +K Sbjct: 184 FKLDLNGSGLLVEAEKLHLAMGCTEEKYHFDK--FRRMCILSGCDYLDSLPGIGLAKACKFILKTEQEDMRIALKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRLCALEDYETDERYCSNAGTLLEDS---EQALHLALGNLNPFSMKRLD--SWTPEKAWPTPKNVKRSKHKSIWQTNFQSENTHTPKK 380
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: EXO1_DANRE (Exonuclease 1 OS=Danio rerio GN=exo1 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.210e-10 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 2 Query: 2 FKMDRYGNGEELVLSKVFDSVSSKPSFRN-FDKELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLK-----IEKGSQMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDFLGPKIPPSVAVAIAEGKLDPTTMEAFD 475 KMD+ GNG E+ + S N F +E F MC+L+GCD+L S+ GIG+ KA L+ N D +L V+K ++ +PE+Y + F +A F + ++D R++ + P + + L + G + + +A G LD TM+ D Sbjct: 184 LKMDKQGNGLEIEQCHL----GRCKSLGNIFTEEKFRYMCILSGCDYLQSLYGIGLGKACKLLRMANNPD-ILKVIKKMGQYLKMDISVPEEYIEGFTKANNTFLYQLVFDPLRRKVVPLNPYPDHI---NPAALSYAGTNVGDEKGLQMALGNLDINTMQRID 339
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Match: FEN1_CANTT (Flap endonuclease 1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RAD27 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 1.296e-8 Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 53 FDSVSSKPSFRNFD--KELFTGMCVLAGCDFLPSVPGIGIVKAHSLVSKYRNLDRVLSVLKIEKGS---QMPEDYTKSFKEALAVFQHARIYDAEIRELKHIKPLTEQLLQYLDEGLDF 394 D +S K + D KE F +C+L GCD+ ++ G+G V A+ L+ ++ +L++++ IEKG+ +PE++ + EA +F + + A LK +P E L++Y+ +G F Sbjct: 205 IDEISYKEAMAGLDMNKEQFVDLCILLGCDYCETIRGVGPVTAYKLIKEHGSLEKIVEW--IEKGNTKYTVPENW--PYAEARELFLNPEVKKASDISLKWKEPDVEGLIEYMVKGKGF 319 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0015832 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0015832 ID=g.arboreum_cottongen_reftransV1_0015832; Name=g.arboreum_cottongen_reftransV1_0015832; organism=Gossypium arboreum; type=contig; length=1195bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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