g.arboreum_cottongen_reftransV1_0006460, g.arboreum_cottongen_reftransV1_0006460 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0006460
Unique Nameg.arboreum_cottongen_reftransV1_0006460
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1559
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr4chromosomeg.arboreum_cottongen_reftransV1_0006460:1..1559 .
Chr4:127331594..127334683 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: B9SZ77_RICCO (Light-inducible protein CPRF-2, putative OS=Ricinus communis GN=RCOM_0484650 PE=4 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.231e-105
Identity = 214/317 (67.51%), Postives = 248/317 (78.23%), Query Frame = -2
Query:  362 DVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS 1285
            D EDYQAFLK KLNLACAAVA S ASF KP+DS+ RAD G QASNT QLGS   S+G G       + D +    + S PS  KK    ++P+TS GSS+EQSD+DE EGE E TENMDP D KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLRVEN+ LLK LTDIS +YNE+AV+NR+LKADVETL+AKVKMAEE VKR TGLN +FH +PE+ +MS  SFDG PS+TSTDAAV  +D  +H  YQ   N+ +STHD R+NNALADISSVEN+QP S  + + GNK+GRTASL RVASLEHLQKRIRGG +
Sbjct:  128 DSEDYQAFLKSKLNLACAAVAQSRASFLKPEDSSARADSGLQASNTSQLGSHAPSKGAGHDVFRSQEVDVDGSVGIPSLPSTHKKSVVPLKPTTS-GSSREQSDDDENEGETELTENMDPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLTDISHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNSLFHTIPEMSTMSMPSFDGSPSDTSTDAAVPVQDDTEHQFYQ-PPNNPLSTHDPRVNNALADISSVENVQPHSGAAGLGGNKMGRTASLQRVASLEHLQKRIRGGAT 442          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: U5GAQ8_POPTR (BZIP transcription factor family protein OS=Populus trichocarpa GN=POPTR_0005s05470g PE=4 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.210e-103
Identity = 230/384 (59.90%), Postives = 269/384 (70.05%), Query Frame = -2
Query:  347 SEMNRSTSEWAFQQFLRXXXXXX-------XXXXXXXXXXXXXXXXNNKHDNIPADV----EDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDL--RINNALADISSVENIQPVSEGSA-VTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1429
            S+MNRS SEWAFQ+FL+E               ++ +    N    NN +   PAD+    EDY AFLK KLN+ACAAVA+S A F KP  S   A+ GSQAS+T  LGS   S+G G       DKD N      S PS QKK     +P+TS GSS+E S++DE E E E TENM PAD KRVRRMLSNRESARRSRRRKQAHLTELE+QV+QLRVEN+ LLK L D SQ+YNE+AV+NR+LKAD+ETL+AKV+MAEE VKR TGLN +FHA+P I +MS  SFDGCPS+TS DAAV  +D PKH  YQ A N+ ISTHD   R+N  LADISSVEN+QP S  +A V+GNK+GRTASL RVASLE LQKRIRG  S  G Q
Sbjct:   18 SKMNRSESEWAFQRFLQEASAATFDDNTPNSSADKTDVVHINDYGYNNNNATTPADIPVESEDYHAFLKSKLNMACAAVALSRAYFVKPLKSPATAESGSQASSTSHLGSHAPSKGAGHDLSRSRDKDANEPLGTPSLPSMQKKLAVSGKPTTS-GSSRELSEDDENEAETEITENMHPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADTSQKYNESAVDNRVLKADIETLRAKVRMAEETVKRFTGLNHMFHAMPYISAMSMPSFDGCPSDTSADAAVPVKDDPKHHFYQ-APNNPISTHDSRPRVNFVLADISSVENVQPNSGTAAGVSGNKLGRTASLQRVASLERLQKRIRGVASPCGPQ 399          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: B2DBE7_SOYBN (BZIP protein OS=Glycine max GN=SBZ1 PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 2.396e-102
Identity = 223/415 (53.73%), Postives = 277/415 (66.75%), Query Frame = -2
Query:  368 MDRVFSVEEIPDHFWSSSA-PDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDN------------------IPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGT----------GDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDG-CPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGG 1516
            MDRVFSV++I DHFW     P    N S  S+M+RS SEWAFQ+F++E               +    E +                      +  D E+YQAFLK KLNLACAAVAM+  S AK QD +  +D GSQ +N   +GS+T S+G+           DKD NA   + S P+ QKK    +RPSTS GSS+EQSD++++EGE    +N DPADVKRVRRMLSNRESARRSRRRKQAHLT+LE+QVSQLR EN+ LLK LTD+SQ+Y+++AV+NR+LKADVETL+AKVKMAEE VKR TGLNP+ HA+ +I S+   SFDG  PS+TS DA+V  +D P H  YQ   N+ I +HD  +NN L  ISS+EN+Q  +  + V GNKIG+TASL RVASLEHLQKRIRGG
Sbjct:    1 MDRVFSVDDISDHFWPPPPIPVSGANTS--SQMSRSASEWAFQRFIQEASASAPSPPSSSSPADVVFVEIDDQPKPTPPPPSHGGVLPSDPGPVALDSEEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSDGGSQPTNPSLVGSQTTSKGSIPSGNDQSKLQDKDINAPVGIPSIPAIQKKPAVAIRPSTS-GSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMPHAMSDISSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIPSHDPIVNNGLGGISSIENVQQQNAAAVVGGNKIGQTASLQRVASLEHLQKRIRGG 412          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: A0A0B2PBF0_GLYSO (Light-inducible protein CPRF2 OS=Glycine soja GN=glysoja_013839 PE=4 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 8.767e-102
Identity = 223/423 (52.72%), Postives = 280/423 (66.19%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXX------------------XXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGT----------GDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDG-CPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVT--GNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516
            MDRVFSV++I DHFW    P      S  S+M+RS SEWAFQ+FL+E                        +         NG    N    +P D ++YQAFLK KLNLACAAVAM+  S AK QD +  ++ GSQ +N   + S+T S+G+           DKD N    + S P+ QKK    +RPSTS GSS+EQSD++++EGE    +N DPADVKRVRRMLSNRESARRSRRRKQAHLT+LE+QVSQLR EN+ LLK LTD+SQ+Y+++AV+NR+LKADVETL+ KVKMAEE VKR TGLNP+ HA+ +I S+   SFDG  PS+TS DAAV  +D P H  YQ  + + I +HD  +NN L  ISS+EN+Q   + +AV   GNK+G+TASL RVASLEHLQ+RIRGG   NG+Q
Sbjct:    1 MDRVFSVDDISDHFWQPPIPVSAAQTS--SQMSRSASEWAFQRFLQEASASAPSPPSSSSAADVVFVEIEDQPKPAPPPPSNGAVLPNAPGPVPLDSDEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTS-GSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQ---QNAAVVLGGNKMGQTASLQRVASLEHLQERIRGGPPSNGEQ 417          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: M1BPR9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019455 PE=4 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 5.471e-99
Identity = 227/447 (50.78%), Postives = 285/447 (63.76%), Query Frame = -2
Query:  347 MDRVFSVEE-IPDHFWSSSAPDDDKNKSPGSE----------MNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHD-----------------------------------NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRA-DRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSV-ENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1516
            MDRVFSV++ I DHFWS+    +    SP S           MNRS+SEWAFQ+FL+E                +    ++++D                                   NIP D E+YQAFLK +L+LACAAVA++ A   KPQDS++ A D+G + ++  Q  S   ++G+G       DKD      + S PS QKK   QV+ ST++GSS+E SD+DE EGE ETT+  DPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVEN+ LLK LTDISQ+YNE+AV+NR+LKADVETL+AKVKMAEE VKR TGLNP+F A+ E+ SM+  SF G PS+TSTD A+  +D P+H  YQ   N+ + THD RI N + D+  +  ++Q     +AV GNK+GRTAS+ RVASLEHLQKRIRG VS  G Q
Sbjct:    1 MDRVFSVDDDIGDHFWSTPPTAELGVDSPTSAATAAISYSKMMNRSSSEWAFQRFLQEAAGTTTSSPPLPPTMASSSSSSHQNDVVEIKDENLSTPNLNSSTALNSKPAATSFASAPPQNIPVDAEEYQAFLKNRLDLACAAVALTRAKNLKPQDSSSIAPDKGPETASASQSVSHISTKGSGQEVRKVQDKDSGGPVGIPSLPSVQKKPVVQVK-STTSGSSRELSDDDEAEGEAETTQGTDPADTKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNESAVDNRVLKADVETLRAKVKMAEETVKRVTGLNPLFQAMSEMSSMAMPSFSGSPSDTSTDTALPVQDDPQHHYYQQPPNNHMPTHDPRIQNGMVDVPPIGGSVQQNLAAAAVGGNKMGRTASMQRVASLEHLQKRIRGEVSSCGTQ 446          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: V7BJR6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G187400g PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.237e-95
Identity = 228/445 (51.24%), Postives = 278/445 (62.47%), Query Frame = -2
Query:  347 ANHPTNHTMDRVFSVEEIPDHFWSS-----SAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXX------------------------NNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGT----------GDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDG-CPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1540
            ++H  ++ MDRVFSV+EI DHFW S     SA D+       S+M+RS SEWAFQ+FL+E                                              N    +P D ++YQAFLK KLNLACAAVAM+ AS AK Q+     D GSQ  +  Q+GS+T S+ +           DKD N    + S PS QKK    VRPSTS GSS+E SD+++ EGE    + MDPAD KRVRRMLSNRESARRSRRRKQAHLT+LE+QVSQLR EN+ LLK LTD+SQ+Y+E+AV+NR+LKADVETL+AKVKMAEE VKR TGLNP+ HA+ ++ S  M  FDG  PS+TS DAAV  +D   H  YQ  +N+ I  HD  +N+ L  ISS+EN+Q  S    V GNK+G+T SL RVASLEHLQKRIRGGV       NGKQ
Sbjct:   19 SHHTQSNDMDRVFSVDEISDHFWPSPPIPVSAADE------ASKMSRSASEWAFQRFLQEASAPSPPSPSSAATAAPAAPSDVVLVEIDDHPKPAPAPPLNAAVLPNTPAPVPLDSDEYQAFLKSKLNLACAAVAMTRASLAKSQEPIPFVDGGSQPIDPSQVGSQTTSKASIPSGNDPSNLQDKDTNVPVGMPSIPSMQKKPVVAVRPSTS-GSSRELSDDEDAEGETSMND-MDPADAKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMVHAMADMSSLGMPLFDGRSPSDTSADAAVPVQDD-HHQFYQPTSNNPIPNHDPIVNDGLGGISSIENVQQNST-EVVGGNKMGQTTSLQRVASLEHLQKRIRGGVDSCGPPSNGKQ 453          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: I1NIQ1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 7.868e-95
Identity = 214/409 (52.32%), Postives = 269/409 (65.77%), Query Frame = -2
Query:  389 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXX------------------XXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGT----------GDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDG-CPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVT--GNKIGRTASLHRVASLEHL 1516
            MDRVFSV++I DHFW    P      S  S+M+RS SEWAFQ+FL+E                        +         NG    N    +P D ++YQAFLK KLNLACAAVAM+  S AK QD +  ++ GSQ +N   + S+T S+G+           DKD N    + S P+ QKK    +RPSTS GSS+EQSD++++EGE    +N DPADVKRVRRMLSNRESARRSRRRKQAHLT+LE+QVSQLR EN+ LLK LTD+SQ+Y+++AV+NR+LKADVETL+ KVKMAEE VKR TGLNP+ HA+ +I S+   SFDG  PS+TS DAAV  +D P H  YQ  + + I +HD  +NN L  ISS+EN+Q   + +AV   GNK+G+TASL RVASLEHL
Sbjct:    1 MDRVFSVDDISDHFWQPPIPVSAAQTS--SQMSRSASEWAFQRFLQEASASAPSPPSSSSAADVVFVEIEDQPKPAPPPPTNGAVLPNAPGPVPLDSDEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTS-GSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQ---QNAAVVLGGNKMGQTASLQRVASLEHL 403          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: P93839_SOYBN (G/HBF-1 OS=Glycine max GN=G/HBF-1 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 9.639e-95
Identity = 200/327 (61.16%), Postives = 239/327 (73.09%), Query Frame = -2
Query:  347 NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRA-DRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1297
            NI  D E+YQAFLK +L+LACAAVA++      PQDS + A D+GS+ ++  Q GS   + G+G       DKD      + S P  QKK   QVR ST++GSS+EQSD+DE EGE ETT+ MDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVEN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+ KVKMAEE VKR TGLNP+F A+ EI S  M S+ G PS+TS DAAV  +D PKH  YQ   N+ + THD RI N + D+  +EN++     +AV GNK+GRT S+ RVASLEHLQKRIRG VS  G Q
Sbjct:   48 NIAVDSEEYQAFLKSQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTLGSGQEVAKIQDKDAGGPVGIPSLPPVQKKPVVQVR-STTSGSSREQSDDDEAEGEAETTQGMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRTKVKMAEETVKRVTGLNPLFQAMSEISSMVMPSYSGSPSDTSADAAVPVQDDPKHHYYQQPPNNLMPTHDPRIQNGMVDVPPIENVEQNPATAAVGGNKMGRTTSMQRVASLEHLQKRIRGEVSSCGTQ 373          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: Q93YM7_TOBAC (BZIP transcription factor OS=Nicotiana tabacum GN=BZI-1 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 8.228e-94
Identity = 200/327 (61.16%), Postives = 239/327 (73.09%), Query Frame = -2
Query:  347 NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRA-DRGSQASNTPQLGSKTVSRGTG-------DKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVSLNGKQ 1297
            NI  D E+YQAFLK +L+LACAAVA++      PQDS + A D+GS+ ++  Q GS   + G+G       DKD      + S P  QKK   QVR ST++GSS+EQSD+DE EGE ETT+ MDPAD KRVRRMLSNRESARRSRRRKQAHLTELE+QVSQLRVEN+ LLK LTDISQ+YNEAAV+NR+LKADVETL+ KVKMAEE VKR TGLNP+F A+ EI S  M S+ G PS+TS DAAV  +D PKH  YQ   N+ + THD RI N + D+  +EN++     +AV GNK+GRT S+ RVASLEHLQKRIRG VS  G Q
Sbjct:  120 NIAVDSEEYQAFLKSQLHLACAAVALTRGKSLNPQDSGSTAHDKGSETASAAQSGSHVSTLGSGQEVAKIQDKDAGGPVGIPSLPPVQKKPVVQVR-STTSGSSREQSDDDEAEGEAETTQGMDPADAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRVENSSLLKRLTDISQKYNEAAVDNRVLKADVETLRTKVKMAEETVKRVTGLNPLFQAMSEISSMVMPSYSGSPSDTSADAAVPVQDDPKHHYYQQPPNNLMPTHDPRIQNGMVDVPPIENVEQNPATAAVGGNKMGRTTSMQRVASLEHLQKRIRGEVSSCGTQ 445          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Match: Q0GPG9_SOYBN (BZIP transcription factor bZIP89 OS=Glycine max GN=bZIP89 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.362e-92
Identity = 212/410 (51.71%), Postives = 268/410 (65.37%), Query Frame = -2
Query:  389 MDRVFSVEEIPDHFWSSSA-PDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDN------------------IPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGT----------GDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMS--SFDG-CPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVT--GNKIGRTASLHRVASLEHL 1516
            MDRVFSV++I DHFW     P    N S  S+M+RS SEWAFQ+F++E               +    E +                      +  D E+YQAFLK KLNLACAAVAM+  S AK QD +  ++ GSQ +N   + S+T S+G+           DKD N    + S P+ QKK    +RPSTS GSS+EQSD++++EGE    +N DPADVKRVRRMLSNRESARRSRRRKQAHLT+LE+QVSQLR EN+ LLK LTD+SQ+Y+++AV+NR+LKADVETL+ KVKMAEE VKR TGLNP+ HA+ +I S+   SFDG  PS+TS DAAV  +D P H  YQ  + + I +HD  +NN L  ISS+EN+Q   + +AV   GNK+G+TASL RVASLEHL
Sbjct:    1 MDRVFSVDDISDHFWPPPPIPVSGANTS--SQMSRSASEWAFQRFIQEASASAPSPPSSSSPADVVFVEIDDQPKPTPPPPSHGGVLPSDPGPVALDSEEYQAFLKSKLNLACAAVAMTRGSLAKSQDPSPFSEGGSQPTNPSLVESQTTSKGSIPSENDPSKLQDKDTNVPVGIPSIPAMQKKPAVAIRPSTS-GSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPSHDPIVNNGLGGISSIENVQ---QNAAVVLGGNKMGQTASLQRVASLEHL 404          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.507e-99
Identity = 221/408 (54.17%), Postives = 272/408 (66.67%), Query Frame = -2
Query:  347 MDRVFSVEEIPDHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHD---NIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTG-----DKDDNAVAEVLS--FPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALP-EIPS--MSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIRGGVS-----LNGKQ 1516
            MDRVFSVE+I D FWS  A +D    S    MNRS SEWAFQ FL++    +       +         N  +   N+P D EDYQA+LK +L+LACAAVA++ AS  KPQDSA   D GSQASNT QL S+   +G+G     ++D  A+A   +   P+ QKK   QV+ +TS  S     D+DE+EGE ETT N DP+D KRVRRMLSNRESARRSRRRKQAH+TELE+QVSQLRVEN+ LLK LTDISQRYN+AAV+NR+LKAD+ET++AKVKMAEE VKR TGLNP+F ++  EI +  M SF G PS+TS D     +DG K   YQ A    +   D +I N L  +  V+N+Q  S    V GNK+ RT+S+ RVASLEHLQKRIRGGVS     ++GKQ
Sbjct:    1 MDRVFSVEDISDQFWSPPARED----SSKLVMNRSDSEWAFQSFLQQASALESSQPLPSDPVPVAGDVKNPVEIPANVPVDSEDYQAYLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSAIQVKSTTSGSSRDHSDDDDELEGETETTRNGDPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAKVKMAEETVKRVTGLNPMFQSMSSEISTIGMQSFSGSPSDTSADTT---QDGSKQHFYQPAPTSHMPAQDQKIQNGLLQVPPVDNLQQHSASGPVEGNKMERTSSMQRVASLEHLQKRIRGGVSSCEAQVSGKQ 401          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP63_ARATH (Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 8.036e-61
Identity = 163/382 (42.67%), Postives = 216/382 (56.54%), Query Frame = -2
Query:  374 MDRVFSVEEIP-DHFWSSSAPDDDKNKSPGSEMNRSTSEWAFQQFLRXXXXXXXXXXXXXXXXXXXXXXNNKHDNIPADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPEIPSMSSFDGCPSETSTDAAVYEEDGPKHTLYQAAANDSISTHDLRINNALADISSVENIQPVSEGSAVTGNKIGRTASLHRVASLEHLQKRIR 1516
            M++VFS EEI  +H WS +           + +NRS SEWAF +F++E      +         +     N    +P D E+Y+AFLK KLNLACAAVAM   +F KPQD++ R+D G                G  + +  ++A   + P       +    S S  S  E+        E +   NM+P +VKRV+RMLSNRESARRSRRRKQAHL+ELE+QVSQLRVEN+ L+K LTD++Q +N+A+V NR+LKA++ETL+AKVKMAEE VKR TG NP+FH +P+I S  S    PSETS        + P  T  Q    + IS+ +                    +G A+ G K+ RTAS+ RV SLEHLQKRIR
Sbjct:    1 MEKVFSDEEISGNHHWSVNGM---------TSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPN----VPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNG----------------GANESEQASLASSKATP-----MMSSAITSGSELSGDEE--------EADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSL---PSETS--------NSPDTTSSQVTTPEIISSGN--------------------KGKALIGCKMNRTASMRRVESLEHLQKRIR 309          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP10_ARATH (Basic leucine zipper 10 OS=Arabidopsis thaliana GN=BZIP10 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.020e-22
Identity = 96/207 (46.38%), Postives = 135/207 (65.22%), Query Frame = -2
Query:  668 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVF 1288
             D +DY+  LK KL   CA V        KP+DS +  +   Q      + S  +++G        +    S P+  KK    ++  TS GSS+E SD+++++ ENETT ++ P DVK+ RRMLSNRESARRSRRRKQ   ++LE+QV+ L+ E++ LLK L++++ +Y+EAAV NRILKAD+ETL+AKVKMAEE VKR TG+NP+ 
Sbjct:  113 VDSDDYRRVLKNKLETECATVVSLRVGSVKPEDSTSSPETQLQP-----VQSSPLTQG-------ELGVTSSLPAEVKKTGVSMKQVTS-GSSREYSDDEDLDEENETTGSLKPEDVKKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEHSSLLKQLSNMNHKYDEAAVGNRILKADIETLRAKVKMAEETVKRVTGMNPML 306          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZP25_ARATH (Basic leucine zipper 25 OS=Arabidopsis thaliana GN=BZIP25 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.717e-22
Identity = 101/230 (43.91%), Postives = 139/230 (60.43%), Query Frame = -2
Query:  605 ADVEDYQAFLKKKLNLACAAVAMSMASFAKPQDSATRADRGSQASNTPQLGSKTVSRGTGDKDDNAVAEVLSFPSGQKKFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKRTTGLNPVFHALPE--IPSMSSFDGCPSETST 1288
             D   Y A LK KL LACAAVA  + +  KP+DS+  A    QA      GS       G       + V   P+   + +  V    ++ SS++ SD+D+++G+ +     DP DVKR RRMLSNRESARRSRRRKQ  + E ++QV QLR E++ L+  L+D++ +Y+ AAV+NRIL+AD+ETL+ KVKMAEE VKR TG+NP+  + P   IP    F   PS +S+
Sbjct:  129 VDPNQYHAILKSKLELACAAVARRVGTV-KPEDSSASASNQKQAQ-----GSIVAQTSPG------ASSVRFSPTTSTQKKPDVPARQTSISSRDDSDDDDLDGDADN---GDPTDVKRARRMLSNRESARRSRRRKQEQMNEFDTQVGQLRAEHSTLINRLSDMNHKYDAAAVDNRILRADIETLRTKVKMAEETVKRVTGVNPLHWSRPNMGIP----FSNTPSASSS 339          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: BZIP9_ARATH (Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.014e-12
Identity = 68/146 (46.58%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  632 KFRAQVRPSTSTGSSKEQSXXXXXXXXXXXXXNMDPADVKRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETLXXXXXXXXXXXKR---TTGLNPVF--HALPEIPSMSSF 1054
            + R  VR +TS  S     DED      ++    DP D+KR+RRM SNRESA+RSRRRKQ +L +LE+QV  L+ +N+ L K L D +Q++  A  NNR+LK+DVETL+ KVK+AE+ V R   T+ LN +   H  P   S+SS 
Sbjct:   83 EVRGGVRRTTSGSSHVNSDDEDAETEAGQSEMTNDPNDLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVETLRVKVKLAEDLVARGSLTSSLNQLLQTHLSPPSHSISSL 228          
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 7.966e-10
Identity = 42/69 (60.87%), Postives = 57/69 (82.61%), Query Frame = -2
Query:  731 KRVRRMLXXXXXXXXXXXRKQAHLTELESQVSQLRVENADLLKSLTDISQRYNEAAVNNRILKADVETL 937
            +RVR+  SNRESARRSR RK AHL ELE QV+QL+ EN+ LL+ +  ++Q+YN+A V+NR+L+AD+ETL
Sbjct:  227 ERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETL 295          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9SZ77_RICCO8.231e-10567.51Light-inducible protein CPRF-2, putative OS=Ricinu... [more]
U5GAQ8_POPTR1.210e-10359.90BZIP transcription factor family protein OS=Populu... [more]
B2DBE7_SOYBN2.396e-10253.73BZIP protein OS=Glycine max GN=SBZ1 PE=2 SV=1[more]
A0A0B2PBF0_GLYSO8.767e-10252.72Light-inducible protein CPRF2 OS=Glycine soja GN=g... [more]
M1BPR9_SOLTU5.471e-9950.78Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
V7BJR6_PHAVU2.237e-9551.24Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
I1NIQ1_SOYBN7.868e-9552.32Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
P93839_SOYBN9.639e-9561.16G/HBF-1 OS=Glycine max GN=G/HBF-1 PE=2 SV=1[more]
Q93YM7_TOBAC8.228e-9461.16BZIP transcription factor OS=Nicotiana tabacum GN=... [more]
Q0GPG9_SOYBN2.362e-9251.71BZIP transcription factor bZIP89 OS=Glycine max GN... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0006460 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CPRF2_PETCR1.507e-9954.17Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
BZP63_ARATH8.036e-6142.67Basic leucine zipper 63 OS=Arabidopsis thaliana GN... [more]
BZP10_ARATH1.020e-2246.38Basic leucine zipper 10 OS=Arabidopsis thaliana GN... [more]
BZP25_ARATH5.717e-2243.91Basic leucine zipper 25 OS=Arabidopsis thaliana GN... [more]
BZIP9_ARATH4.014e-1246.58Basic leucine zipper 9 OS=Arabidopsis thaliana GN=... [more]
OP2_MAIZE7.966e-1060.87Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 245..272
NoneNo IPR availableCOILSCoilCoilcoord: 203..237
NoneNo IPR availableGENE3D1.20.5.170coord: 194..246
e-value: 9.9E-12
score: 44.3
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 33..348
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 1..15
NoneNo IPR availablePANTHERPTHR22952:SF90BASIC LEUCINE ZIPPER 63coord: 1..15
coord: 33..348
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 194..243
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 190..254
e-value: 1.3E-17
score: 74.6
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 193..244
e-value: 1.4E-13
score: 50.6
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 197..212
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 192..247
score: 11.312
IPR020983Basic leucine-zipper, C-terminalPFAMPF12498bZIP_Ccoord: 261..384
e-value: 1.8E-34
score: 119.2

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0006460 ID=g.arboreum_cottongen_reftransV1_0006460; Name=g.arboreum_cottongen_reftransV1_0006460; organism=Gossypium arboreum; type=contig; length=1559bp
GTTTTTGCTTAGCAAATTAGAGCATAAAGGTTTTTGAGGTAGCACTTCAG
AGATGTAGAATTGGCTTCCTACCATATCAGTTGACAAGGATGGAACTAAA
AGGAAAGCTAACAAGACGTATAGAAAATCCCACAGCATGCTATGGAAATG
GCAGTGGTAAAATCTATCATTCCAGCAAATATGGCATGATTAAAGGAAAG
GTTTAGTCAAGCAGTAGCCATTACTACCCAAGTAACCTAAAAACTAACAT
TGTTTCCATCAGTTAAACCAGAAATCATAGCACACTTTGGTCAGTTCCAA
CACATTCTTCACTATCTTTAGACTCTGCTTGTCTGCCTTGCTCCTATTGC
TTCCCATTCAGGCTTACACCCCCACGGATCCTCTTTTGCAGATGCTCCAA
GCTAGCCACTCGATGCAAAGAAGCTGTCCGCCCAATTTTGTTTCCTGTCA
CTGCTGATCCTTCAGAAACAGGTTGTATATTTTCAACTGAAGAAATATCT
GCGAGTGCATTGTTGATTCTAAGGTCATGAGTGGATATCGAATCGTTAGC
AGCAGCCTGATAAAGGGTATGCTTTGGACCATCTTCCTCATAAACTGCAG
CATCCGTTGAAGTTTCAGAGGGACATCCATCAAATGATGACATGCTTGGT
ATCTCAGGTAATGCATGGAACACAGGGTTCAAACCAGTAGTTCTTTTGAC
TGCCTCTTCAGCCATTTTTACCTTTGCTTTCAATGTTTCAACATCAGCTT
TTAAAATTCTGTTGTTAACTGCTGCTTCATTGTACCTTTGACTAATGTCA
GTCAAACTCTTCAATAAGTCTGCATTTTCAACTCTTAATTGAGAAACCTG
TGACTCAAGTTCTGTCAAATGGGCCTGTTTTCTTCTTCTAGAACGCCTAG
CAGACTCTCGATTCGAAAGCATCCTCCTTACACGTTTTACATCAGCAGGA
TCCATGTTCTCCGTTGTTTCATTTTCACCTTCAACTTCATCCTCGTCCGA
CTGTTCTTTTGACGATCCAGTACTTGTGCTTGGCCTCACTTGAGCTCTAA
ATTTTTTCTGTCCACTGGGAAAAGAAAGAACTTCAGCCACTGCATTATCA
TCCTTGTCACCGGTTCCTCTGGAAACAGTTTTGGATCCCAATTGTGGAGT
ATTAGATGCCTGTGACCCCCTGTCGGCTCTAGTAGCAGAGTCTTGAGGTT
TTGCAAAAGAAGCCATTGACATGGCAACAGCAGCACAAGCCAAGTTAAGT
TTCTTCTTAAGAAAAGCCTGATAATCCTCTACATCTGCAGGAATATTGTC
GTGTTTATTATTTTCAAAACACCCATTCTCCTTAGCTTCCTCCTCTTCGT
TATCTTCACCTTTCTTATCAACTTCTTCTCTAAGGAACTGCTGAAAAGCC
CACTCCGAAGTACTACGGTTCATTTCAGAACCGGGGCTTTTGTTTTTATC
GTCGTCGGGGGCGGAAGAAGACCAGAAATGGTCGGGGATTTCTTCAACGG
AGAAAACTCTATCCATTGTGTGATTGGTTGGGTGGTTTGCCGGCTTTTTC
GTCCTTTTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR020983Basic_leucine-zipper_C
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription