g.arboreum_cottongen_reftransV1_0011879, g.arboreum_cottongen_reftransV1_0011879 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A075BNV7_ROSRU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa rugosa GN=DXR PE=2 SV=1) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 400/474 (84.39%), Postives = 432/474 (91.14%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PGGF L++ DC T GR++QCSAQAP PP GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL QVK FKP+LVAVRNESL+NELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL+GAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+ +PV A Sbjct: 1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLLNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLYGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A059P9W8_ROSHC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa hybrid cultivar GN=DXR PE=2 SV=1) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 400/474 (84.39%), Postives = 432/474 (91.14%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PGGF L++ DC T GR++QCSAQAP PP GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL QVK FKP+LVAVRNESL+NELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL+GAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+ +PV A Sbjct: 1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLLNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLYGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: V7CB56_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G200300g PE=3 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 402/474 (84.81%), Postives = 435/474 (91.77%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALN+ SP E+ S+ F S KS+ + FPGGF KK +CG R+V CS +AP PPPAWPGRAFP+ KTW+GPKPISIVGSTGSIGTQTLDIVAENPDKF++V LAAGSNVTLLA Q+KTFKPQLVAVRNESL+ EL++AL D+E KPEIIPGEQG++EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSE+TWPRLDLCKLGSLTFK PDNVKYPSM+LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTCEKHQ E +++PSLEEIIHYDLWAR YAA++Q SS +P+LA Sbjct: 1 MALNISSPAEVKSLFFSDSFKSNCLTAKFPGGFAFKKKECG----RRVSCSVKAPPPPPAWPGRAFPEQVGKTWEGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQIKTFKPQLVAVRNESLIAELEEALHDVEHKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKNPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQNELLSSPSLEEIIHYDLWARKYAATLQDSSSFTPILA 470
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: W8NXM5_JATCU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Jatropha curcas GN=JCGZ_11476 PE=2 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 407/473 (86.05%), Postives = 433/473 (91.54%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PG F LK+ GRKVQCSAQ P P P GRKTWDGPKPISIVGSTGSIGTQTLDIVAENP+KF++V LAAGSNVTLLA QVKTFKPQLVAVRNESLV+ELK+ALAD+E+KPEIIPGEQG++EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+ VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPV+KLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGA+YD+IEIVIHPQSIIHSMVET+DSSVLAQLGWPDMRLPILYTMSWP+RI CSEITWPRLDLCK GSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFK+VELTC KH+ E V++PSLEEIIHYDLWARDYAA++Q SSGLSPVLA Sbjct: 1 MALNLLSPAEIKAISFLDSTKSNQLPKL-PGSFSLKR---KDLGRKVQCSAQPPPPAWPGRAFPEP--GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPNKFKVVALAAGSNVTLLADQVKTFKPQLVAVRNESLVDELKEALADVEEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPDRISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKIVELTCNKHRAELVSSPSLEEIIHYDLWARDYAANLQPSSGLSPVLA 467
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: Q947C3_SOLLC (1-deoxy-D-xylulose-5-phosphate reductoisomerase OS=Solanum lycopersicum GN=DXR PE=2 SV=1) HSP 1 Score: 782.326 bits (2019), Expect = 0.000e+0 Identity = 403/475 (84.84%), Postives = 431/475 (90.74%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXX--XXPGGF-VLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597 MALNL+SP EI SISFL ++KSS F GG + +K+C F ++VQCSAQ P PP GR++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTF+P+LVAVRNESLV ELKDALADME KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP AHKHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYD+IEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVELFI E+ISYLDIFK+VELTC KH+EE V++PSLEEIIHYDLWARDYAAS++ SSGLSP L Sbjct: 1 MALNLLSPAEIKSISFLDNSKSSYNLSHLKFTGGLSIRRKECSGAFAKRVQCSAQLPPPPAWPGRAVAEP-GRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFRPKLVAVRNESLVEELKDALADMEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPPAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVELFISERISYLDIFKIVELTCAKHREELVSSPSLEEIIHYDLWARDYAASLEPSSGLSPAL 474
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2) HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0 Identity = 370/403 (91.81%), Postives = 388/403 (96.28%), Query Frame = 2 Query: 386 GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPV 1594 GR++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTFKP+LVAVRNESLV+ELK+ALAD + KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PVDKLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMR+PILYTMSWP+RIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVELFIDEKI YLDIFKVVELTC+ H+ E V PSLEEIIHYDLWAR+YAAS+Q S+GLSPV Sbjct: 69 GRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGYLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPV 471
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2) HSP 1 Score: 752.666 bits (1942), Expect = 0.000e+0 Identity = 374/447 (83.67%), Postives = 407/447 (91.05%), Query Frame = 2 Query: 272 GGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXX---XXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 GGF L++ + G FG+ V+CS + Q P RA P+ R++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QV+ FKP LVAVRNESL+NELK+ALAD++ K EIIPGEQGVIEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KH VKILPADSEHSAIFQCIQGLPE ALR+IILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWP+R+ CSE+TWPRLDLCKLGSLTFK PDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC+KH+ E V +PSLEEI+HYDLWAR+YAA++Q SSG PV A Sbjct: 31 GGFSLRRRNQGRGFGKGVKCSVKVQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDLWAREYAANVQLSSGARPVHA 477
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2) HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0 Identity = 381/443 (86.00%), Postives = 410/443 (92.55%), Query Frame = 2 Query: 272 GGFVLK-KDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597 GGF K KD G T ++V CSAQ+ PPPAWPGRAFP+PGR TW+GPKPIS++GSTGSIGTQTLDIVAENPDKFRIV LAAGSNVTLLA QVK FKP+LV+V++ESL++ELK+ALA E PEIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWPERIYCSEITWPRLDLCK+ LTFK PDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKI YLDIFKVVELTC+KH+ E +PSLEEI+HYD WARDYAA++ +S+GLSP L Sbjct: 28 GGFAFKRKDSGCTAAKRVHCSAQSQSPPPAWPGRAFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKAFKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPERIYCSEITWPRLDLCKV-DLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHRSEMAVSPSLEEIVHYDQWARDYAATVLKSAGLSPAL 469
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ACAM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 261/389 (67.10%), Postives = 323/389 (83.03%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQS 1576 K I+++GSTGSIGTQTLDIVA+ PD+FRIVG+AAG N+ LL+ Q++ F+P++VA+ + + +++LKDA+AD++ +P+++ GE GV+EVA + DA SVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL KH VK+LPADSEHSAIFQC+QG+PE LRRIILTASGGAFRD PV+KL +V VADALKHPNW+MGKKITVDSATL NKGLEVIEAHYLFG +YD I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY++SWPERI W +LDL K G LTF+ P++ KYP M LAY GR GG M V++AANE+AV LF++EKIS+LDI KV+E C+++Q + PSLE+I+ D WAR +I QS Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQLSDLKDAIADVDPQPQLLAGEAGVVEVAAYGDAESVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDWPVEKLPEVTVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGVDYDHIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYSLSWPERIATD---WEQLDLVKSGDLTFREPNHQKYPCMQLAYDVGRMGGAMPAVMNAANEQAVALFLEEKISFLDIPKVIETACDRYQSQNTLQPSLEDILAADQWARQEILTISQS 387
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_NOSS1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dxr PE=3 SV=1) HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0 Identity = 257/380 (67.63%), Postives = 316/380 (83.16%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K I++VGSTGSIGTQTLDIV++ PD+FRIVGLAAGSNV +LA Q++ F+PQ+ A+ + L+ A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH VK+LPADSEHSAIFQC+QG+P+ L++I+LTASGGAFRD V++L +V V+DALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y DIEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY W RL+L K G+LTF+ PD+ KYP M LAYAAGRAGG+M VL+AANE+ V LF+DEKI +LDI + +EL C++HQ + A PSL++I+ D WAR Sbjct: 3 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEKLPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLKKILLTASGGAFRDWDVERLAEVTVSDALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WERLNLVKAGNLTFREPDHQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWAR 379
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1) HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0 Identity = 257/380 (67.63%), Postives = 317/380 (83.42%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K I++VGSTGSIGTQTLDIV + PD+FRIVGLAAG+NV +LA Q++ F+P++ A+ +E + LK+A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAG P VLPL KH VK+LPADSEHSAIFQC+QG+P+ LR+I+LTASGGAFRD V++L DV VADALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +YD+IEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWP+RIY W RLDL K G+LTF+ PD+ KYP M LAYA G+AGG+M VL+AANE+AV LF+DEKI +LDI + +E C++HQ + A PSL++I+ D WAR Sbjct: 2 KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDKLPALKEAIIDLDPQPILLAGEAGVIEVARYGDAQTVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGAPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKSGLRKILLTASGGAFRDWDVERLADVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYDNIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPDRIYTD---WERLDLVKAGNLTFREPDHQKYPCMQLAYAVGKAGGSMPAVLNAANEQAVALFLDEKIRFLDIPRCIEWVCDRHQNDNRANPSLDDILAADKWAR 378
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ANAVT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3 SV=1) HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0 Identity = 258/380 (67.89%), Postives = 315/380 (82.89%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K I++VGSTGSIGTQTLDIV++ PD+FRIVGLAAGSNV +LA Q++ F+PQ+ A+ + L+ A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH VK+LPADSEHSAIFQC+QG+P+ LR+I+LTASGGAFRD V++L +V VADALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y DIEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY W L+L K G+LTF+ PD+ KYP M LAYAAGRAGG+M VL+AANE+ V LF+DEKI +LDI + +EL C++HQ + A PSL++I+ D WAR Sbjct: 2 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEKLPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRKILLTASGGAFRDWDVERLAEVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLNLVKAGNLTFREPDHQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWAR 378
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAP8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1) HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0 Identity = 256/380 (67.37%), Postives = 315/380 (82.89%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K I+I+GSTGSIGTQTLDIV + PD+F++VGLA +N LLA Q+K F+P++VA+ ES +N +KDA+A ++ P ++ GE GV+EVAR+ D+ SVVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH VK+LPADSEHSAIFQC+QG+P+ LRRIILTASGGAFRD PV++LK V V DA+KHPNW+MG+KITVDSATL NKGLEVIEAHYLFG EYD I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY W LDL K GS TF+ PD+ KYP M LAYAAGR+GG + VL+AANE+AV LF++EKI++L+I K++E+ C++ + +TP+LE+I+ D WAR Sbjct: 2 KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQLNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRRIILTASGGAFRDWPVEQLKFVTVEDAIKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGLEYDKIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLDLVKAGSFTFREPDHHKYPCMQLAYAAGRSGGAIPAVLNAANEQAVALFLEEKIAFLEIPKLIEMACDRFTNQNTSTPTLEDILEADRWAR 378
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1) HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0 Identity = 256/380 (67.37%), Postives = 312/380 (82.11%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K I+++GSTGSIGTQTLDIVA+ PD+FRIVGLAAG ++ L Q++ F+PQ+VA+ +E +++LK A+AD++ +P ++ G GV EVA + DA +VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL ++ VK+LPADSEHSAIFQC+QG+P LRRI+LTASGGAFRD PVDKL V +ADALKHPNW+MG+KITVDSATL NKGLEVIEAHYLFG +YD IEI+IHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY MSWPERI WPRLDL K G LTFK PD+ KYP M LAYA GRAGG M VL+AANE+AV LF+ E+I++LDI +++E TC++ + A PSLE+I+ D WAR Sbjct: 2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFRDWPVDKLGQVTIADALKHPNWSMGQKITVDSATLMNKGLEVIEAHYLFGLDYDHIEIIIHPQSIIHSLIEVQDTSVLAQLGWPDMRLPVLYAMSWPERIATD---WPRLDLLKAGDLTFKEPDHAKYPCMKLAYAVGRAGGAMPAVLNAANEQAVALFLAERIAFLDIPRLIEQTCDRFSSKNCAEPSLEDILAADQWAR 378
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1) HSP 1 Score: 523.472 bits (1347), Expect = 1.054e-179 Identity = 266/381 (69.82%), Postives = 317/381 (83.20%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARD 1552 K IS++GSTGSIGTQTLDIV + PD+F++VGLA SNV LLA QV+ F+P++VA+ +ES + LKDA+A M+ P I+ GEQGV EVARH DA SVVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL KH VK+LPADSEHSAIFQC+QG+P+ LRRIILTASGGAFRD PV++LK V V DALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y++I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY W +LDL K GSLTF+ PD+ KYP M LAYAAG AGG M VL+AANE+AV LF+ EKI++LDI KV+E TC+ ++ + PSLE+I+ D WAR+ Sbjct: 2 KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESKLGSLKDAIASMDYSPLILAGEQGVAEVARHGDAESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLIEKHGVKLLPADSEHSAIFQCLQGVPDGGLRRIILTASGGAFRDWPVEQLKYVTVQDALKHPNWSMGQKITVDSATLMNKGLEVIEAHFLFGMDYENIDIVIHPQSIIHSLIEVQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEQLDLVKAGSLTFREPDHDKYPCMQLAYAAGNAGGAMPAVLNAANEQAVALFLAEKIAFLDIPKVIEKTCDNFRDHNRSQPSLEDILEADKWARE 379 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011879 ID=g.arboreum_cottongen_reftransV1_0011879; Name=g.arboreum_cottongen_reftransV1_0011879; organism=Gossypium arboreum; type=contig; length=1970bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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