g.arboreum_cottongen_reftransV1_0011879, g.arboreum_cottongen_reftransV1_0011879 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A075BNV7_ROSRU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa rugosa GN=DXR PE=2 SV=1) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 400/474 (84.39%), Postives = 432/474 (91.14%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PGGF L++ DC T GR++QCSAQAP PP GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL QVK FKP+LVAVRNESL+NELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL+GAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+ +PV A Sbjct: 1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLLNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLYGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A059P9W8_ROSHC (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa hybrid cultivar GN=DXR PE=2 SV=1) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 400/474 (84.39%), Postives = 432/474 (91.14%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PGGF L++ DC T GR++QCSAQAP PP GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL QVK FKP+LVAVRNESL+NELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNW+MGKKITVDSATLFNKGLEVIEAHYL+GAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+ +PV A Sbjct: 1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLLNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLYGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: V7CB56_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G200300g PE=3 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 402/474 (84.81%), Postives = 435/474 (91.77%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALN+ SP E+ S+ F S KS+ + FPGGF KK +CG R+V CS +AP PPPAWPGRAFP+ KTW+GPKPISIVGSTGSIGTQTLDIVAENPDKF++V LAAGSNVTLLA Q+KTFKPQLVAVRNESL+ EL++AL D+E KPEIIPGEQG++EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSE+TWPRLDLCKLGSLTFK PDNVKYPSM+LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTCEKHQ E +++PSLEEIIHYDLWAR YAA++Q SS +P+LA Sbjct: 1 MALNISSPAEVKSLFFSDSFKSNCLTAKFPGGFAFKKKECG----RRVSCSVKAPPPPPAWPGRAFPEQVGKTWEGPKPISIVGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQIKTFKPQLVAVRNESLIAELEEALHDVEHKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKNPDNVKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCEKHQNELLSSPSLEEIIHYDLWARKYAATLQDSSSFTPILA 470
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: W8NXM5_JATCU (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Jatropha curcas GN=JCGZ_11476 PE=2 SV=1) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 407/473 (86.05%), Postives = 433/473 (91.54%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600 MALNL+SP EI +ISFL STKS+ KL PG F LK+ GRKVQCSAQ P P P GRKTWDGPKPISIVGSTGSIGTQTLDIVAENP+KF++V LAAGSNVTLLA QVKTFKPQLVAVRNESLV+ELK+ALAD+E+KPEIIPGEQG++EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+ VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPV+KLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGA+YD+IEIVIHPQSIIHSMVET+DSSVLAQLGWPDMRLPILYTMSWP+RI CSEITWPRLDLCK GSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFK+VELTC KH+ E V++PSLEEIIHYDLWARDYAA++Q SSGLSPVLA Sbjct: 1 MALNLLSPAEIKAISFLDSTKSNQLPKL-PGSFSLKR---KDLGRKVQCSAQPPPPAWPGRAFPEP--GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPNKFKVVALAAGSNVTLLADQVKTFKPQLVAVRNESLVDELKEALADVEEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRLPILYTMSWPDRISCSEITWPRLDLCKQGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKIVELTCNKHRAELVSSPSLEEIIHYDLWARDYAANLQPSSGLSPVLA 467
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: Q947C3_SOLLC (1-deoxy-D-xylulose-5-phosphate reductoisomerase OS=Solanum lycopersicum GN=DXR PE=2 SV=1) HSP 1 Score: 782.326 bits (2019), Expect = 0.000e+0 Identity = 403/475 (84.84%), Postives = 431/475 (90.74%), Query Frame = 2 Query: 182 MALNLVSPPEIHXXXXXXXXXXXXXXX--XXPGGF-VLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597 MALNL+SP EI SISFL ++KSS F GG + +K+C F ++VQCSAQ P PP GR++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTF+P+LVAVRNESLV ELKDALADME KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLP AHKHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYD+IEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVELFI E+ISYLDIFK+VELTC KH+EE V++PSLEEIIHYDLWARDYAAS++ SSGLSP L Sbjct: 1 MALNLLSPAEIKSISFLDNSKSSYNLSHLKFTGGLSIRRKECSGAFAKRVQCSAQLPPPPAWPGRAVAEP-GRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFRPKLVAVRNESLVEELKDALADMEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPPAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVELFISERISYLDIFKIVELTCAKHREELVSSPSLEEIIHYDLWARDYAASLEPSSGLSPAL 474
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_SYNS3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9311) GN=dxr PE=3 SV=1) HSP 1 Score: 467.618 bits (1202), Expect = 1.253e-157 Identity = 240/398 (60.30%), Postives = 294/398 (73.87%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADM--EQKPEIIP----GEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQG------------LPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K IS++GSTGSIGTQTL IV + PD+FR+V L+AG N++LL Q++ +P +VA+ +++L+ ELKD L + + +PE +P G +G+ VA A VVTGIVGCAGL PT+AAI AGKD+A+ANKETLIA GP VLP K ++LPADSEHSAIFQC+QG +P LRRI LTASGGAFRD L+ VADA HPNW+MGKKITVDSA+L NKGLEVIEAHYLFG +YD IEIVIHPQSIIHSMVE DSSVLAQLGWPDM+LPILY MSWP R+ E W RLDL ++G L+F+APD KYP M LAYAAGRAGGTM VL+AANE+AV F++EKI +LDI K++E CE+H+ + A P L++++ D WAR Sbjct: 2 KAISVLGSTGSIGTQTLAIVEDFPDQFRVVALSAGRNLSLLVSQIQRHRPDVVALADQALLAELKDRLMALPADTRPEPLPHLVGGPEGLDVVASWDSADLVVTGIVGCAGLLPTLAAIRAGKDLAVANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWSDTARLSTGVPTPGLRRIQLTASGGAFRDWSAADLEKATVADATSHPNWSMGKKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMVELADSSVLAQLGWPDMKLPILYCMSWPSRL---ETPWRRLDLTEVGQLSFRAPDPAKYPCMDLAYAAGRAGGTMPAVLNAANEEAVAQFLEEKIHFLDIPKMIEGACEQHKPDLAANPCLDDVLAVDQWAR 396
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_SYNS9 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain CC9902) GN=dxr PE=3 SV=1) HSP 1 Score: 464.922 bits (1195), Expect = 1.915e-156 Identity = 236/398 (59.30%), Postives = 291/398 (73.12%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADME------QKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQG------------LPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 K IS++GSTGSIGTQTL IV + PD+FR+V L AG N+ LL Q++ +P+LVA+ +E+L+ ELK L ++ Q PE++ G G+ A A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+QG +P LRRI LTASGGAFRD L+ VADA HPNW+MG+KITVDSA+L NKGLEVIEAHYLFG +YD IEIVIHPQSIIHSMVE DSSVLAQLGWPDM+LPILY +SWP R+ E W RLDL ++G L+F+APD KYP M LAYAAGRAGGTM V++AANE+AV F++E+I +LDI +V+E CE+H+ + +A P L++++ D WAR Sbjct: 2 KAISVLGSTGSIGTQTLQIVDDFPDQFRVVALTAGRNLALLVEQIQRHQPELVALADEALLPELKQRLEALDPSDRPAQCPEMVGGPDGLEVAASWGSAELVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWADTARLSTGVPTPGLRRIQLTASGGAFRDWNAADLEKATVADATSHPNWSMGRKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMVEMADSSVLAQLGWPDMKLPILYCLSWPSRL---ETPWRRLDLTEVGQLSFRAPDPNKYPCMELAYAAGRAGGTMPAVMNAANEEAVAQFLEERIHFLDIPEVIEAACERHKPDLMAHPQLDDVLEVDQWAR 396
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 463.766 bits (1192), Expect = 3.138e-156 Identity = 232/391 (59.34%), Postives = 287/391 (73.40%), Query Frame = 2 Query: 422 IVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELK---DALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQG------------LPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549 ++GSTGSIGTQTL I E P++FR+V L AG N+ LL Q++ +P+LVA+ N L+ EL+ DAL ++P+++ G G+ A A VVTGIVGCAGL PT+AA+ AGKD+ALANKETLIA GP VLP K ++LPADSEHSAIFQC+QG +P LRRI LTASGGAFRD + L++ VADA HPNW+MG+KITVDSA+L NKGLEVIEAHYLFG +YD IEIVIHPQSIIHSM+E DSSVLAQLGWPDM+LPILY +SWP R+ E W RLDL ++G L+F+APD KYP M LAYAAGRAGGTM V++AANE+AV F++EKI +LDI V+E CE+H+ + +A P LE+++ D WAR Sbjct: 1 MLGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELVALANADLLPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADLVVTGIVGCAGLLPTLAAVRAGKDLALANKETLIAAGPVVLPELKKSGSRLLPADSEHSAIFQCLQGTPWAENARLSTGVPTPGLRRIQLTASGGAFRDWKAEDLENATVADATSHPNWSMGRKITVDSASLMNKGLEVIEAHYLFGLDYDHIEIVIHPQSIIHSMIELADSSVLAQLGWPDMKLPILYCLSWPSRL---ETPWRRLDLTEVGQLSFRAPDPAKYPCMQLAYAAGRAGGTMPAVMNAANEEAVAQFLEEKIHFLDIPVVIEAACERHKADLIAHPQLEDVLAVDQWAR 388
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 460.685 bits (1184), Expect = 5.972e-155 Identity = 232/399 (58.15%), Postives = 288/399 (72.18%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQ------KPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQG------------LPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARD 1552 K IS++GSTGSIGTQTL I E P++F+IV L AG N+ L+ Q++T +P++V++ +ESL++EL + + + KP ++ G +G+ A A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+QG +P + I LTASGGAFRD + L V DA HPNW+MGKKITVDSATL NKGLEVIEAHYLFG YD IEI+IHPQSIIHSMVE DSSVLAQLGWPDM+LPILY +SWP R+ + WPRL L ++G+LTFK PD KYP M LAY+AG++GGTM VL+AANEKAVELF++E+ ++DI KV+E CEKH+ + PSL EI+ D WAR+ Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPEQFKIVALTAGKNLDLVIKQIETHQPEVVSLADESLLSELSSRINSLTENKKIVKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQGTPWADNARLSTGMPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGLSYDQIEIIIHPQSIIHSMVELDDSSVLAQLGWPDMKLPILYCLSWPSRL---KTPWPRLKLTQIGNLTFKEPDTKKYPCMELAYSAGKSGGTMPAVLNAANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 459.914 bits (1182), Expect = 1.246e-154 Identity = 233/399 (58.40%), Postives = 287/399 (71.93%), Query Frame = 2 Query: 410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQ------KPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQG------------LPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARD 1552 K IS++GSTGSIGTQTL I E PD+F+IV L AG N+ L+ Q++T +P++V++ +ESL+ EL + + + KP ++ G +G+ A A VVTGIVGCAGL PT+AAIEAGKD+ALANKETLIA GP V+P K ++LPADSEHSAIFQC+QG +P + I LTASGGAFRD + L V DA HPNW+MGKKITVDSATL NKGLEVIEAHYLFG YD IEI+IHPQSIIHSMVE DSSVLAQLGWPDM+LPILY +SWP R+ + WPRL L ++G+LTFK PD KYP M LAY+AG++GGTM VL+AANEKAVELF++E+ ++DI KV+E CEKH+ + PSL EI+ D WAR+ Sbjct: 2 KAISVLGSTGSIGTQTLQIAEEFPDQFKIVALTAGKNLDLVTKQIETHQPEVVSLADESLLPELTRRINSLNEDSKILKKPLLMAGAEGLNTAAAWGSADLVVTGIVGCAGLLPTLAAIEAGKDLALANKETLIAAGPVVIPALKKSGSRLLPADSEHSAIFQCLQGTPWADNARLSTGVPTPGFKSIQLTASGGAFRDWKAEDLVKATVEDATSHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGLSYDQIEIIIHPQSIIHSMVELDDSSVLAQLGWPDMKLPILYCLSWPSRL---KTPWPRLKLTQIGNLTFKEPDTNKYPCMELAYSAGKSGGTMPAVLNAANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011879 ID=g.arboreum_cottongen_reftransV1_0011879; Name=g.arboreum_cottongen_reftransV1_0011879; organism=Gossypium arboreum; type=contig; length=1970bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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