g.arboreum_cottongen_reftransV1_0011879, g.arboreum_cottongen_reftransV1_0011879 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0011879
Unique Name	g.arboreum_cottongen_reftransV1_0011879
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1970

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr11	chromosome	g.arboreum_cottongen_reftransV1_0011879:1..1970 . Chr11:61828684..61834093 -		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: J7FKW5_9ROSA (1-deoxy-D-xylulose-5-phosphate reductoisomerase OS=Eriobotrya japonica GN=DXR PE=2 SV=1)

HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 400/474 (84.39%), Postives = 424/474 (89.45%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            MALNL+SP EI +ISFL STKSS +    PGGF L++ DCGT  GR+VQCSA    PP            R+TWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIV LAAGSNVTLL  QV+ FKPQLVAV NESLVNELK+ALAD+++KPEIIPGEQGV+EVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGG+FRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FI EKISYLDIFK+VELTC KH+ E V +PSLEEIIHYDLWAR YAA  Q S+   PV A
Sbjct:    1 MALNLLSPAEIKAISFLDSTKSSRYLPKLPGGFALRRRDCGTVIGRRVQCSAAQAPPPAWPGRAVAET-SRRTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLVDQVRRFKPQLVAVGNESLVNELKEALADLDEKPEIIPGEQGVVEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGSFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFISEKISYLDIFKIVELTCAKHRAELVTSPSLEEIIHYDLWARAYAADFQSSASSIPVFA 473

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A0D2S4A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G001700 PE=3 SV=1)

HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0
Identity = 422/470 (89.79%), Postives = 432/470 (91.91%), Query Frame = 2

Query:  182 MALNLVSPPE-IHXXXXXXXXXXXXXXXXXPGGFVLK-KDCGTTFGR--KVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSS 1579
            MALN+V P E I S SF   T S S   L P GFV K K  GT  GR  ++QCSAQAP PPPAWPG AFP PGRKTWDGPKPISIVGSTGSIG+QTLDI+AENPDKFRIVGLAAGSN TLLAHQVKTFKPQLVAVRNESLVNELKDALADME KPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPE AL RIILTASGGAFRD PVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQL WPDMRLPILYT+SWPERIYCSEITWPRLDLCKLGSL FKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFI EKISYLDIFKVVELTCEKHQEE VATPSLEEI+HYD WARDY +++Q SS
Sbjct:    1 MALNMVYPSEMIESTSFFHPTNSVSLPNLSPDGFVWKRKGYGTAIGRIRRLQCSAQAPHPPPAWPGLAFPHPGRKTWDGPKPISIVGSTGSIGSQTLDIIAENPDKFRIVGLAAGSNATLLAHQVKTFKPQLVAVRNESLVNELKDALADMEPKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPEGALWRIILTASGGAFRDWPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLRWPDMRLPILYTLSWPERIYCSEITWPRLDLCKLGSLAFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIKEKISYLDIFKVVELTCEKHQEELVATPSLEEIVHYDSWARDYTSALQCSS 470

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: K4BKT6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=DXR PE=3 SV=1)

HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 404/475 (85.05%), Postives = 432/475 (90.95%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXX--XXPGGF-VLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597
            MALNL+SP EI SISFL ++KSS       F GG  + +K+C   F ++VQCSAQ P PP           GR++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTF+P+LVAVRNESLV ELKDALADME KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYD+IEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVELFI E+ISYLDIFK+VELTC KH+EE V++PSLEEIIHYDLWARDYAAS++ SSGLSP L
Sbjct:    1 MALNLLSPAEIKSISFLDNSKSSYNLSHLKFTGGLSIRRKECSGAFAKRVQCSAQPPPPPAWPGRAVAEP-GRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFRPKLVAVRNESLVEELKDALADMEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVELFISERISYLDIFKIVELTCAKHREELVSSPSLEEIIHYDLWARDYAASLEPSSGLSPAL 474

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: D7SHS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g08390 PE=3 SV=1)

HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 408/474 (86.08%), Postives = 428/474 (90.30%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLK-KDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            MALNL+ P EI  ISFL STKS+   KL PGGFVLK KD G TFGR+V CSAQ P P            GRKTWDGPKP+S+VGSTGSIGTQTLDIVAENPDKFRIV LAAGSNVTLLA QVKTFKPQLVAVRNE+LVNELK+ALAD E KPEIIPGEQGVIEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRI+LTASGGAFRD PVDKLK+ KV+DALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEI+IHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+RIYCSEITWPRLDLCKLGSLTFK PDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKI YLDIFKVVELTC+KHQ E V +PSLEEI+HYDLWARDYAAS+  SS L PV A
Sbjct:    1 MALNLLPPAEIKLISFLDSTKSTRLPKL-PGGFVLKRKDYGATFGRRVNCSAQPPPPAWPGRAVPEL--GRKTWDGPKPLSVVGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKTFKPQLVAVRNEALVNELKEALADCEHKPEIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRILLTASGGAFRDWPVDKLKEAKVSDALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIIIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEITWPRLDLCKLGSLTFKTPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHQAELVTSPSLEEIVHYDLWARDYAASLHHSSSLMPVPA 471

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: M1C9V9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400024503 PE=3 SV=1)

HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0
Identity = 403/475 (84.84%), Postives = 431/475 (90.74%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXX--XXPGGF-VLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597
            MALNL+SP EI SISFL ++KSS       F GG  + +K C   F ++VQCSAQ P PP           GR++W+GPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTF+P+LVAVRNESLV ELKDALADME KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYD+IEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+R+YCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVELFI E+ISYLDIFK+VELTC KH+EE V++PSLEEIIHYDLWARDYAAS++ SSGLSP L
Sbjct:    1 MALNLLSPTEIKSISFLDTSKSSYNLNHLKFSGGLSIRRKGCSGAFAKRVQCSAQPPPPPAWPGRAVAEP-GRQSWEGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFRPKLVAVRNESLVEELKDALADMEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVELFISERISYLDIFKIVELTCAKHREELVSSPSLEEIIHYDLWARDYAASLEPSSGLSPAL 474

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: B9RB24_RICCO (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast, putative OS=Ricinus communis GN=RCOM_1510580 PE=3 SV=1)

HSP 1 Score: 784.637 bits (2025), Expect = 0.000e+0
Identity = 407/473 (86.05%), Postives = 437/473 (92.39%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKKDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            MALNL+SP E+ S+SFL ST+SS   KL PG F LK+     FGRKVQCSAQAP P       A P  GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTFKPQLV+VR+ESLV+ELK+ALAD+++KPEIIPGEQG++EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+ VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGA+YD+IEIVIHPQSIIHSMVET+DSSVLAQLGWPDMR+PILYTMSWP+RIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDE+ISYLDIFK+VELTC+KH+ E V +PSLEEIIHYDLWAR+YAAS+Q SSGLSPVLA
Sbjct:    1 MALNLLSPAELKSVSFLDSTRSSQLPKL-PGSFSLKR---KEFGRKVQCSAQAPPPAWPGRAVAEP--GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPQLVSVRDESLVDELKEALADVDEKPEIIPGEQGIVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIEIVIHPQSIIHSMVETEDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMELAYAAGRAGGTMTGVLSAANEKAVEMFIDEQISYLDIFKIVELTCDKHRAELVTSPSLEEIIHYDLWAREYAASLQPSSGLSPVLA 467

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A075BNV9_ROSDA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa damascena GN=DXR PE=2 SV=1)

HSP 1 Score: 783.867 bits (2023), Expect = 0.000e+0
Identity = 401/474 (84.60%), Postives = 432/474 (91.14%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            MALNL+SP EI +ISFL STKS+   KL PGGF L++ DC T  GR++QCSAQAP PP           GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL  QVK FKP+LVAVRNESLVNELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL+GA+YDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+  +PV A
Sbjct:    1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLVNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLYGADYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A0A075BQK4_9ROSA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rosa x centifolia GN=DXR PE=2 SV=1)

HSP 1 Score: 783.867 bits (2023), Expect = 0.000e+0
Identity = 401/474 (84.60%), Postives = 432/474 (91.14%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            MALNL+SP EI +ISFL STKS+   KL PGGF L++ DC T  GR++QCSAQAP PP           GR+TWDGPKPIS+VGSTGSIGTQTLDIVAENP+KFR+V LAAGSNVTLL  QVK FKP+LVAVRNESLVNELK+AL+ +E KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYL+GA+YDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAY+AGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC KH+ E V +PSLEEI+HYDLWARDYAA++Q S+  +PV A
Sbjct:    1 MALNLLSPAEIKAISFLDSTKSTHLPKL-PGGFALRRRDCRTVIGRRIQCSAQAPPPPAWPGSAFPEP-GRRTWDGPKPISVVGSTGSIGTQTLDIVAENPEKFRVVALAAGSNVTLLVDQVKRFKPKLVAVRNESLVNELKEALSGLEDKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLYGADYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYSAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCAKHRAELVTSPSLEEIVHYDLWARDYAANLQSSTSSTPVFA 472

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: Q0MW94_TOBAC (1-deoxy-D-xylulose-5-phosphate reductoisomerase OS=Nicotiana tabacum GN=DXR PE=2 SV=1)

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 403/475 (84.84%), Postives = 428/475 (90.11%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXX--XXPGGFVLK-KDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597
            MALNL+SP EI +ISFL ++ SS       F GG  +K K+     G++VQCS QAP P       A     RKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTFKP+LVAVRNESLV ELKDALADME KPEIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAI+AGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWP+RIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVELFI E+ISYLDIFK+VELTC KH+EE V +PSLEEIIHYDLWARDYAAS++ S+G SP L
Sbjct:    1 MALNLLSPSEIKTISFLDTSTSSYNLNHLKFQGGVAIKRKEWSGISGKRVQCSVQAPPPAWPGRAVAE---ARKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVEELKDALADMEDKPEIIPGEQGIIEVARHPDAVTVVTGIVGCAGLKPTVAAIKAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFISERISYLDIFKIVELTCAKHREELVTSPSLEEIIHYDLWARDYAASLETSAGFSPAL 472

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Match: A1KXW2_HEVBR (Putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Hevea brasiliensis GN=DXR PE=2 SV=1)

HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0
Identity = 408/474 (86.08%), Postives = 431/474 (90.93%), Query Frame = 2

Query:  182 MALNLVSPPEIHXXXXXXXXXXXXXXXXXPGGFVLK-KDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            M LNL+SP EI +ISFL STKS+   K  PG   LK KD G  FGRKVQCSAQ P P         P  GRKTWDGPKPIS+VGSTGSIGTQTLDIVAENP KFR+V LAAGSNVTLLA QVKTFKPQLVAVRNESL +ELKDALAD+E+KPEIIPGE+GV+EVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDI LANKETLIAGGPFVLPLAHK+ VKILPADSEHSA+FQCIQGLP+ ALRRIILTASGGAFRD PVD+LK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGA+YD+IEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPIL TMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFK+VELTC+KH+ E V +PSLEEIIHYDLWARDYAAS+Q SSGLSPVLA
Sbjct:    1 MELNLLSPAEIKAISFLDSTKSNHLPKF-PGVISLKRKDFGAAFGRKVQCSAQPPPPAWPGRAFPEP--GRKTWDGPKPISVVGSTGSIGTQTLDIVAENPGKFRVVALAAGSNVTLLADQVKTFKPQLVAVRNESLADELKDALADLEEKPEIIPGEEGVVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDICLANKETLIAGGPFVLPLAHKYNVKILPADSEHSAVFQCIQGLPDGALRRIILTASGGAFRDWPVDRLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGADYDNIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILCTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKIVELTCDKHRAELVTSPSLEEIIHYDLWARDYAASLQPSSGLSPVLA 471

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2)

HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0
Identity = 370/403 (91.81%), Postives = 388/403 (96.28%), Query Frame = 2

Query:  386 GRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPV 1594
            GR++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QVKTFKP+LVAVRNESLV+ELK+ALAD + KPEIIPGEQGVIEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KHKVKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRD PVDKLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMR+PILYTMSWP+RIYCSE+TWPRLDLCKLGSLTFKAPDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVELFIDEKI YLDIFKVVELTC+ H+ E V  PSLEEIIHYDLWAR+YAAS+Q S+GLSPV
Sbjct:   69 GRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHKVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDWPVDKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRIPILYTMSWPDRIYCSEVTWPRLDLCKLGSLTFKAPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVELFIDEKIGYLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPV 471

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2)

HSP 1 Score: 752.666 bits (1942), Expect = 0.000e+0
Identity = 374/447 (83.67%), Postives = 407/447 (91.05%), Query Frame = 2

Query:  272 GGFVLKK-DCGTTFGRKVQCSXXXXXXXXXXXX---XXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVLA 1600
            GGF L++ + G  FG+ V+CS +  Q     P    RA P+  R++WDGPKPISIVGSTGSIGTQTLDIVAENPDKFR+V LAAGSNVTLLA QV+ FKP LVAVRNESL+NELK+ALAD++ K EIIPGEQGVIEVARHP+AV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KH VKILPADSEHSAIFQCIQGLPE ALR+IILTASGGAFRD PV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSM+ETQDSSVLAQLGWPDMRLPILYTMSWP+R+ CSE+TWPRLDLCKLGSLTFK PDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKISYLDIFKVVELTC+KH+ E V +PSLEEI+HYDLWAR+YAA++Q SSG  PV A
Sbjct:   31 GGFSLRRRNQGRGFGKGVKCSVKVQQQQQPPPAWPGRAVPEAPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVRRFKPALVAVRNESLINELKEALADLDYKLEIIPGEQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDLWAREYAANVQLSSGARPVHA 477

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2)

HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0
Identity = 381/443 (86.00%), Postives = 410/443 (92.55%), Query Frame = 2

Query:  272 GGFVLK-KDCGTTFGRKVQCSXXXXXXXXXXXXXXXXXXGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQSSGLSPVL 1597
            GGF  K KD G T  ++V CSAQ+  PPPAWPGRAFP+PGR TW+GPKPIS++GSTGSIGTQTLDIVAENPDKFRIV LAAGSNVTLLA QVK FKP+LV+V++ESL++ELK+ALA  E  PEIIPGEQG+IEVARHPDAV+VVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA KH VKILPADSEHSAIFQCIQGLPE ALRRIILTASGGAFRDLPV+KLK+VKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYT+SWPERIYCSEITWPRLDLCK+  LTFK PDNVKYPSM LAYAAGRAGGTMTGVLSAANEKAVE+FIDEKI YLDIFKVVELTC+KH+ E   +PSLEEI+HYD WARDYAA++ +S+GLSP L
Sbjct:   28 GGFAFKRKDSGCTAAKRVHCSAQSQSPPPAWPGRAFPEPGRMTWEGPKPISVIGSTGSIGTQTLDIVAENPDKFRIVALAAGSNVTLLADQVKAFKPKLVSVKDESLISELKEALAGFEDMPEIIPGEQGMIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHNVKILPADSEHSAIFQCIQGLPEGALRRIILTASGGAFRDLPVEKLKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTLSWPERIYCSEITWPRLDLCKV-DLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIGYLDIFKVVELTCDKHRSEMAVSPSLEEIVHYDQWARDYAATVLKSAGLSPAL 469

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ACAM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Acaryochloris marina (strain MBIC 11017) GN=dxr PE=3 SV=1)

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 261/389 (67.10%), Postives = 323/389 (83.03%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARDYAASIQQS 1576
            K I+++GSTGSIGTQTLDIVA+ PD+FRIVG+AAG N+ LL+ Q++ F+P++VA+ + + +++LKDA+AD++ +P+++ GE GV+EVA + DA SVVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL  KH VK+LPADSEHSAIFQC+QG+PE  LRRIILTASGGAFRD PV+KL +V VADALKHPNW+MGKKITVDSATL NKGLEVIEAHYLFG +YD I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY++SWPERI      W +LDL K G LTF+ P++ KYP M LAY  GR GG M  V++AANE+AV LF++EKIS+LDI KV+E  C+++Q +    PSLE+I+  D WAR    +I QS
Sbjct:    2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGMAAGRNIELLSQQIRQFRPEIVAIADPNQLSDLKDAIADVDPQPQLLAGEAGVVEVAAYGDAESVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPEGGLRRIILTASGGAFRDWPVEKLPEVTVADALKHPNWSMGKKITVDSATLMNKGLEVIEAHYLFGVDYDHIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYSLSWPERIATD---WEQLDLVKSGDLTFREPNHQKYPCMQLAYDVGRMGGAMPAVMNAANEQAVALFLEEKISFLDIPKVIETACDRYQSQNTLQPSLEDILAADQWARQEILTISQS 387

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_NOSS1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=dxr PE=3 SV=1)

HSP 1 Score: 541.191 bits (1393), Expect = 0.000e+0
Identity = 257/380 (67.63%), Postives = 316/380 (83.16%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549
            K I++VGSTGSIGTQTLDIV++ PD+FRIVGLAAGSNV +LA Q++ F+PQ+ A+     +  L+ A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL  KH VK+LPADSEHSAIFQC+QG+P+  L++I+LTASGGAFRD  V++L +V V+DALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y DIEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY     W RL+L K G+LTF+ PD+ KYP M LAYAAGRAGG+M  VL+AANE+ V LF+DEKI +LDI + +EL C++HQ +  A PSL++I+  D WAR
Sbjct:    3 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEKLPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLKKILLTASGGAFRDWDVERLAEVTVSDALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WERLNLVKAGNLTFREPDHQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWAR 379

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_NOSP7 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dxr PE=3 SV=1)

HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0
Identity = 257/380 (67.63%), Postives = 317/380 (83.42%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549
            K I++VGSTGSIGTQTLDIV + PD+FRIVGLAAG+NV +LA Q++ F+P++ A+ +E  +  LK+A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAG P VLPL  KH VK+LPADSEHSAIFQC+QG+P+  LR+I+LTASGGAFRD  V++L DV VADALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +YD+IEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWP+RIY     W RLDL K G+LTF+ PD+ KYP M LAYA G+AGG+M  VL+AANE+AV LF+DEKI +LDI + +E  C++HQ +  A PSL++I+  D WAR
Sbjct:    2 KAITLVGSTGSIGTQTLDIVTQYPDQFRIVGLAAGNNVEMLAAQIRQFRPKIAAICSEDKLPALKEAIIDLDPQPILLAGEAGVIEVARYGDAQTVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGAPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKSGLRKILLTASGGAFRDWDVERLADVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYDNIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPDRIYTD---WERLDLVKAGNLTFREPDHQKYPCMQLAYAVGKAGGSMPAVLNAANEQAVALFLDEKIRFLDIPRCIEWVCDRHQNDNRANPSLDDILAADKWAR 378

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_ANAVT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxr PE=3 SV=1)

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 258/380 (67.89%), Postives = 315/380 (82.89%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549
            K I++VGSTGSIGTQTLDIV++ PD+FRIVGLAAGSNV +LA Q++ F+PQ+ A+     +  L+ A+ D++ +P ++ GE GVIEVAR+ DA +VVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL  KH VK+LPADSEHSAIFQC+QG+P+  LR+I+LTASGGAFRD  V++L +V VADALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y DIEIVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY     W  L+L K G+LTF+ PD+ KYP M LAYAAGRAGG+M  VL+AANE+ V LF+DEKI +LDI + +EL C++HQ +  A PSL++I+  D WAR
Sbjct:    2 KSITLVGSTGSIGTQTLDIVSQYPDQFRIVGLAAGSNVEMLAEQIRQFRPQIAAISAAEKLPALQAAIKDLDPQPILLGGEAGVIEVARYGDAETVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRKILLTASGGAFRDWDVERLAEVTVADALKHPNWSMGRKITVDSATLMNKGLEVIEAHFLFGLDYQDIEIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLNLVKAGNLTFREPDHQKYPCMQLAYAAGRAGGSMPAVLNAANEQVVALFLDEKIKFLDIPRCIELVCDRHQNDNCANPSLDDILAADQWAR 378

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAP8 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 8801) GN=dxr PE=3 SV=1)

HSP 1 Score: 536.954 bits (1382), Expect = 0.000e+0
Identity = 256/380 (67.37%), Postives = 315/380 (82.89%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549
            K I+I+GSTGSIGTQTLDIV + PD+F++VGLA  +N  LLA Q+K F+P++VA+  ES +N +KDA+A ++  P ++ GE GV+EVAR+ D+ SVVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL  KH VK+LPADSEHSAIFQC+QG+P+  LRRIILTASGGAFRD PV++LK V V DA+KHPNW+MG+KITVDSATL NKGLEVIEAHYLFG EYD I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY     W  LDL K GS TF+ PD+ KYP M LAYAAGR+GG +  VL+AANE+AV LF++EKI++L+I K++E+ C++   +  +TP+LE+I+  D WAR
Sbjct:    2 KKITILGSTGSIGTQTLDIVQQYPDQFQVVGLATRNNGELLAQQIKQFRPEIVAICQESQLNTIKDAIASLDYSPILLTGEAGVVEVARYGDSESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLVEKHGVKLLPADSEHSAIFQCLQGVPKGGLRRIILTASGGAFRDWPVEQLKFVTVEDAIKHPNWSMGRKITVDSATLMNKGLEVIEAHYLFGLEYDKIDIVIHPQSIIHSLIELQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEPLDLVKAGSFTFREPDHHKYPCMQLAYAAGRSGGAIPAVLNAANEQAVALFLEEKIAFLEIPKLIEMACDRFTNQNTSTPTLEDILEADRWAR 378

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAP4 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxr PE=3 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0
Identity = 256/380 (67.37%), Postives = 312/380 (82.11%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWAR 1549
            K I+++GSTGSIGTQTLDIVA+ PD+FRIVGLAAG ++  L  Q++ F+PQ+VA+ +E  +++LK A+AD++ +P ++ G  GV EVA + DA +VVTGIVGCAGL PT+AAI+AGKDIALANKETLIAGGP VLPL  ++ VK+LPADSEHSAIFQC+QG+P   LRRI+LTASGGAFRD PVDKL  V +ADALKHPNW+MG+KITVDSATL NKGLEVIEAHYLFG +YD IEI+IHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY MSWPERI      WPRLDL K G LTFK PD+ KYP M LAYA GRAGG M  VL+AANE+AV LF+ E+I++LDI +++E TC++   +  A PSLE+I+  D WAR
Sbjct:    2 KAITLLGSTGSIGTQTLDIVAQYPDQFRIVGLAAGRSLDKLIPQIRQFRPQIVALADEQQLDDLKAAIADLDPQPILVAGPAGVCEVAAYGDAKTVVTGIVGCAGLLPTIAAIKAGKDIALANKETLIAGGPVVLPLVEQYGVKLLPADSEHSAIFQCLQGVPAGGLRRILLTASGGAFRDWPVDKLGQVTIADALKHPNWSMGQKITVDSATLMNKGLEVIEAHYLFGLDYDHIEIIIHPQSIIHSLIEVQDTSVLAQLGWPDMRLPVLYAMSWPERIATD---WPRLDLLKAGDLTFKEPDHAKYPCMKLAYAVGRAGGAMPAVLNAANEQAVALFLAERIAFLDIPRLIEQTCDRFSSKNCAEPSLEDILAADQWAR 378

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Match: DXR_CYAA5 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Cyanothece sp. (strain ATCC 51142) GN=dxr PE=3 SV=1)

HSP 1 Score: 523.472 bits (1347), Expect = 1.054e-179
Identity = 266/381 (69.82%), Postives = 317/381 (83.20%), Query Frame = 2

Query:  410 KPISIVGSTGSIGTQTLDIVAENPDKFRIVGLAAGSNVTLLAHQVKTFKPQLVAVRNESLVNELKDALADMEQKPEIIPGEQGVIEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHKVKILPADSEHSAIFQCIQGLPECALRRIILTASGGAFRDLPVDKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMVETQDSSVLAQLGWPDMRLPILYTMSWPERIYCSEITWPRLDLCKLGSLTFKAPDNVKYPSMSLAYAAGRAGGTMTGVLSAANEKAVELFIDEKISYLDIFKVVELTCEKHQEEYVATPSLEEIIHYDLWARD 1552
            K IS++GSTGSIGTQTLDIV + PD+F++VGLA  SNV LLA QV+ F+P++VA+ +ES +  LKDA+A M+  P I+ GEQGV EVARH DA SVVTGIVGCAGL PT+AAIEAGKDIALANKETLIAGGP VLPL  KH VK+LPADSEHSAIFQC+QG+P+  LRRIILTASGGAFRD PV++LK V V DALKHPNW+MG+KITVDSATL NKGLEVIEAH+LFG +Y++I+IVIHPQSIIHS++E QD+SVLAQLGWPDMRLP+LY +SWPERIY     W +LDL K GSLTF+ PD+ KYP M LAYAAG AGG M  VL+AANE+AV LF+ EKI++LDI KV+E TC+  ++   + PSLE+I+  D WAR+
Sbjct:    2 KKISLLGSTGSIGTQTLDIVNQYPDQFQVVGLATRSNVELLATQVQQFRPEIVAICDESKLGSLKDAIASMDYSPLILAGEQGVAEVARHGDAESVVTGIVGCAGLLPTIAAIEAGKDIALANKETLIAGGPVVLPLIEKHGVKLLPADSEHSAIFQCLQGVPDGGLRRIILTASGGAFRDWPVEQLKYVTVQDALKHPNWSMGQKITVDSATLMNKGLEVIEAHFLFGMDYENIDIVIHPQSIIHSLIEVQDTSVLAQLGWPDMRLPLLYALSWPERIYTD---WEQLDLVKAGSLTFREPDHDKYPCMQLAYAAGNAGGAMPAVLNAANEQAVALFLAEKIAFLDIPKVIEKTCDNFRDHNRSQPSLEDILEADKWARE 379

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
J7FKW5_9ROSA	0.000e+0	84.39	1-deoxy-D-xylulose-5-phosphate reductoisomerase OS...	[more]
A0A0D2S4A5_GOSRA	0.000e+0	89.79	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
K4BKT6_SOLLC	0.000e+0	85.05	Uncharacterized protein OS=Solanum lycopersicum GN...	[more]
D7SHS1_VITVI	0.000e+0	86.08	Putative uncharacterized protein OS=Vitis vinifera...	[more]
M1C9V9_SOLTU	0.000e+0	84.84	Uncharacterized protein OS=Solanum tuberosum GN=PG...	[more]
B9RB24_RICCO	0.000e+0	86.05	1-deoxy-D-xylulose 5-phosphate reductoisomerase, c...	[more]
A0A075BNV9_ROSDA	0.000e+0	84.60	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
A0A075BQK4_9ROSA	0.000e+0	84.60	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
Q0MW94_TOBAC	0.000e+0	84.84	1-deoxy-D-xylulose-5-phosphate reductoisomerase OS...	[more]
A1KXW2_HEVBR	0.000e+0	86.08	Putative 1-deoxy-D-xylulose 5-phosphate reductoiso...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0011879 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
DXR_ORYSJ	0.000e+0	91.81	1-deoxy-D-xylulose 5-phosphate reductoisomerase, c...	[more]
DXR_ARATH	0.000e+0	83.67	1-deoxy-D-xylulose 5-phosphate reductoisomerase, c...	[more]
DXR_MENPI	0.000e+0	86.00	1-deoxy-D-xylulose 5-phosphate reductoisomerase, c...	[more]
DXR_ACAM1	0.000e+0	67.10	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_NOSS1	0.000e+0	67.63	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_NOSP7	0.000e+0	67.63	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_ANAVT	0.000e+0	67.89	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_CYAP8	0.000e+0	67.37	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_CYAP4	0.000e+0	67.37	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]
DXR_CYAA5	1.054e-179	69.82	1-deoxy-D-xylulose 5-phosphate reductoisomerase OS...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..150
None	No IPR available	GENE3D	1.10.1740.10		coord: 382..463 e-value: 7.3E-28 score: 96.2
None	No IPR available	PANTHER	PTHR30525:SF2	1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, CHLOROPLASTIC	coord: 53..473
None	No IPR available	SUPERFAMILY	55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	coord: 202..339
IPR016040	NAD(P)-binding domain	GENE3D	3.40.50.720		coord: 71..225 e-value: 1.5E-63 score: 213.0
IPR016040	NAD(P)-binding domain	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 76..225
IPR026877	DXP reductoisomerase C-terminal domain	PFAM	PF13288	DXPR_C	coord: 336..457 e-value: 2.8E-37 score: 127.3
IPR026877	DXP reductoisomerase C-terminal domain	SUPERFAMILY	69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain	coord: 369..462
IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase	TIGRFAM	TIGR00243	TIGR00243	coord: 77..459 e-value: 6.9E-160 score: 530.1
IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase	PIRSF	PIRSF006205	Dxp_reductoisomrs	coord: 76..469 e-value: 4.0E-169 score: 560.1
IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase	PANTHER	PTHR30525	1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE	coord: 53..473
IPR003821	1-deoxy-D-xylulose 5-phosphate reductoisomerase	HAMAP	MF_00183	DXP_reductoisom	coord: 79..462 score: 45.336
IPR013644	1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal	PFAM	PF08436	DXP_redisom_C	coord: 221..304 e-value: 2.4E-39 score: 133.3
IPR013512	1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal	PFAM	PF02670	DXP_reductoisom	coord: 79..207 e-value: 3.6E-47 score: 160.2

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0011879 ID=g.arboreum_cottongen_reftransV1_0011879; Name=g.arboreum_cottongen_reftransV1_0011879; organism=Gossypium arboreum; type=contig; length=1970bp
CACCACCATCCTTTGCCACTTCCCAAACTCCCCCACCTCCACACATTAAT
ACCAATTCCTTATTCAAAGAGTTCTCAAAGTTTTTTCTTTTGGCACCCCC
ACTTTTCATTTCTCCAAAGCCTAGCCTGGTGTGATTTCCTTTTTGTTTTG
AGTTAAAAGGGAGTTCCTTTTCACAGTTATCATGGCTTTGAATTTGGTTT
CTCCTCCTGAAATCCATTCTATCTCCTTCTTGGGTTCTACTAAGTCCAGC
TCCTTCTCCAAGCTATTTCCAGGGGGTTTTGTTTTGAAGAAGGACTGTGG
CACCACGTTTGGGAGGAAAGTTCAATGTTCAGCTCAGGCTCCTCAACCAC
CACCTGCATGGCCTGGACGAGCTTTTCCAGATCCCGGACGCAAAACTTGG
GATGGCCCCAAGCCTATCTCCATTGTCGGTTCAACTGGTTCCATTGGAAC
TCAGACGTTGGACATAGTTGCGGAGAATCCAGATAAATTCAGAATCGTGG
GGCTTGCTGCTGGTTCAAATGTCACCCTTCTTGCTCATCAGGTGAAGACA
TTCAAACCTCAACTGGTTGCTGTTAGGAATGAGTCTTTGGTAAATGAACT
CAAAGATGCTTTGGCTGACATGGAGCAAAAGCCTGAAATTATTCCTGGGG
AACAAGGAGTTATTGAGGTTGCTCGCCATCCTGATGCTGTCAGTGTGGTT
ACAGGGATAGTAGGATGTGCAGGATTGAAGCCTACAGTTGCTGCAATAGA
AGCTGGGAAAGATATTGCTTTAGCCAATAAAGAGACCTTGATCGCTGGTG
GTCCCTTTGTCCTTCCTCTTGCTCACAAGCATAAAGTAAAAATCCTTCCA
GCAGATTCTGAACATTCTGCCATTTTTCAGTGTATTCAGGGATTGCCAGA
GTGTGCGCTTCGGCGTATTATTTTGACTGCATCTGGTGGGGCTTTCAGGG
ATTTGCCTGTTGATAAGTTGAAAGACGTTAAAGTAGCTGATGCTTTGAAA
CATCCGAACTGGAATATGGGGAAAAAGATCACGGTGGACTCTGCTACCCT
TTTCAACAAGGGTCTAGAAGTTATTGAAGCCCATTACCTCTTTGGGGCTG
AGTATGATGACATTGAGATAGTAATTCACCCACAATCTATTATTCACTCA
ATGGTTGAAACACAGGATTCATCAGTGCTGGCTCAGTTGGGATGGCCAGA
TATGCGCTTGCCAATCCTATACACTATGTCATGGCCAGAAAGAATTTATT
GCTCTGAAATAACTTGGCCTCGCCTTGATCTTTGCAAACTTGGTTCACTA
ACTTTTAAGGCTCCTGACAACGTGAAATACCCCTCCATGAGTCTTGCCTA
TGCTGCTGGAAGGGCTGGAGGCACCATGACAGGAGTTCTTAGTGCAGCTA
ATGAGAAAGCTGTGGAATTGTTCATAGATGAAAAGATCAGCTATTTGGAT
ATTTTTAAGGTGGTGGAATTAACATGTGAGAAGCACCAGGAAGAATATGT
GGCCACTCCTTCCCTAGAGGAGATTATACATTATGACCTGTGGGCTCGAG
ACTATGCTGCTAGCATACAACAATCATCTGGTCTGAGTCCCGTTCTTGCA
TAACTGATGGCTTGCACATGTTACAAGACCAAACCAGGCTCTATCTTGAA
GACTCGAAAGTTCTCAGTTTATGCAGAAGGCTAGCATTCTTTCAAAGATG
CCTAGTATCATGTGTCTCGATCTGAAGATATTGATATCATTCCCCCGTTT
AGTTGTATAATGTCCAATTTAGAAGTGGCAAATTAAAGAATATAGAGCAT
GACATGTTGCGGTTGGGTGTAAACATAGGACAAATGCGAGCAATCAGTAG
CAGCCTCCGCTAAGCAGGGTTGTTTTTATTACATCTAATTGATGTCATGT
TTATGTTTTTTTTTTTTAATGATATCATTGTACTGAAAGTGTTAAAATAT
TTATATAAAACTTTGACAGG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR026877	DXPR_C
IPR003821	DXP_reductoisomerase
IPR013644	DXP_reductoisomerase_C
IPR013512	DXP_reductoisomerase_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0030604	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
GO:0046872	metal ion binding
GO:0005515	protein binding
GO:0070402	NADPH binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process
GO:0008299	isoprenoid biosynthetic process

Search form

g.arboreum_cottongen_reftransV1_0011879, g.arboreum_cottongen_reftransV1_0011879 (contig) Gossypium arboreum

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