g.arboreum_cottongen_reftransV1_0021925, g.arboreum_cottongen_reftransV1_0021925 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067G988_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005366mg PE=4 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.221e-37 Identity = 95/169 (56.21%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585 NFGD + D++P AWHPMSP+ MGP SNPGIR GNQL PRS DL +PLNPG P P G + S+ + Q P++G QISPLQKPL SPQ++PP QLHPQ P SYS TQ SH+ QLQ+P T FSQALPSQHL G+SG L AS+P Q SS Sbjct: 62 NFGDPITDQIPQNAWHPMSPRNMGPLSNPGIRGFGNQLPPRSGDLGMPLNPGGPADVPLPGLAVSSTSSALQQNFCQPES---QAPSLGQQISPLQKPLQSPQHMPP-LQLHPQVPSSYSHTQNSHLRQLQIP--GQTSFSQALPSQHLLGMSGNLPASQPQGQQIASS 224 HSP 2 Score: 126.716 bits (317), Expect = 8.825e-28 Identity = 105/204 (51.47%), Postives = 120/204 (58.82%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSSASAA-MKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP--TAYPASGVRNQQSTQELGYGQLP--VAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389 PSNQN+ LQQ SQ +K Q WAG+ PQ V SAPA P D+P S S PV + WTEHTSPDG+KYY+N +T SKWEKPEELTLFEQQQQQQ+ P Q P A Q Q Q QQ +P ++Y A VR Q + QELGY QLP A S N+P+RFQQGLQ QD WKNKP GT Sbjct: 303 PSNQNLPLQQGSQGTKQQSQWAGIAPQTVASAPASAPAADLPVSTSIGPAAPVSSQTVAPAKSSWTEHTSPDGYKYYYNCVTGVSKWEKPEELTLFEQQQQQQKPPVQQPPSQLHSQVLPAQHIPQTQQVQLQTQLRQQQQQQLQHPFSSSYQAPVVRGQHNAQELGYTQLPPVAAGSVNNPTRFQQGLQAAQDWMWKNKPSGT 506
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067FX43_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005366mg PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.412e-37 Identity = 95/169 (56.21%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585 NFGD + D++P AWHPMSP+ MGP SNPGIR GNQL PRS DL +PLNPG P P G + S+ + Q P++G QISPLQKPL SPQ++PP QLHPQ P SYS TQ SH+ QLQ+P T FSQALPSQHL G+SG L AS+P Q SS Sbjct: 256 NFGDPITDQIPQNAWHPMSPRNMGPLSNPGIRGFGNQLPPRSGDLGMPLNPGGPADVPLPGLAVSSTSSALQQNFCQPES---QAPSLGQQISPLQKPLQSPQHMPP-LQLHPQVPSSYSHTQNSHLRQLQIP--GQTSFSQALPSQHLLGMSGNLPASQPQGQQIASS 418 HSP 2 Score: 126.716 bits (317), Expect = 3.513e-27 Identity = 105/204 (51.47%), Postives = 120/204 (58.82%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSSASAA-MKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP--TAYPASGVRNQQSTQELGYGQLP--VAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389 PSNQN+ LQQ SQ +K Q WAG+ PQ V SAPA P D+P S S PV + WTEHTSPDG+KYY+N +T SKWEKPEELTLFEQQQQQQ+ P Q P A Q Q Q QQ +P ++Y A VR Q + QELGY QLP A S N+P+RFQQGLQ QD WKNKP GT Sbjct: 497 PSNQNLPLQQGSQGTKQQSQWAGIAPQTVASAPASAPAADLPVSTSIGPAAPVSSQTVAPAKSSWTEHTSPDGYKYYYNCVTGVSKWEKPEELTLFEQQQQQQKPPVQQPPSQLHSQVLPAQHIPQTQQVQLQTQLRQQQQQQLQHPFSSSYQAPVVRGQHNAQELGYTQLPPVAAGSVNNPTRFQQGLQAAQDWMWKNKPSGT 700
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: F6H711_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00710 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.329e-35 Identity = 105/208 (50.48%), Postives = 122/208 (58.65%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASA------AMKPVVECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPH---QLQQPIY--------PTAYPASGVRNQQSTQELGYGQLPV-APSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389 PSNQ +T QQ SQ +K QW G +PQ V S TP TDVPS+ SA A+ PV +C+WTEHTSPDG+KYYHNS+T ES+WEKPEELTL EQQQQQQ+ Q Q Q Q H QLQ + P + ASGV QQ+ QELGY Q V A S NDP+RFQQGLQ Q+ WKNKP G+ Sbjct: 579 PSNQTLTSQQGSQTTKQQWPGTVPQTVASTATITPATDVPSTTSAVPVTTQAVAPV-KCNWTEHTSPDGYKYYHNSVTGESRWEKPEELTLLEQQQQQQKSSVQQSQAQSHTQVLSTQQIPQAQQVQLQTQLQAHLQAQLQSQLRQHQQMQQPPVSSSASGVMGQQNVQELGYAQAQVGASSVNDPARFQQGLQAAQEWMWKNKPAGS 785 HSP 2 Score: 130.183 bits (326), Expect = 2.620e-28 Identity = 93/179 (51.96%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 79 NFGDAMGD-RVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSH-----VGQLQVP-PASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585 N GD +G R+PP AW PMSPQ +GP+SN GI GNQ LPRS D +I PG P GG + LS + S+S + Q+P++G QISPLQK L SPQ+LPPS QL Q P SY+Q QT H GQLQ+ A TPF+Q LPSQ L GLSGQLS S+P VQ + SS Sbjct: 322 NQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSGDGSISSTPGVPLGGLGGSADGSLSGIAVSSSATSQQSFNQPMLQVPSIGEQISPLQKSLQSPQHLPPSLQLQSQTPASYTQPQTPHSSLRQFGQLQISHSAGQTPFNQTLPSQQLLGLSGQLSGSQPQVQQSASS 500
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: B9RZT3_RICCO (Flowering time control protein FCA, putative OS=Ricinus communis GN=RCOM_1001010 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.220e-34 Identity = 100/165 (60.61%), Postives = 115/165 (69.70%), Query Frame = 1 Query: 76 PNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570 PNFGDA+GDRVPP+AW PMSPQ MGP+ N I G+QL+PR +LA P N G PFGGPSDG+ PG +SS++ + P VG QISPLQKPL SPQ+LPPS QLHPQ SYSQTQTSH GQ PFSQALPSQ G+SGQLSAS+P +Q Sbjct: 364 PNFGDAVGDRVPPSAWRPMSPQDMGPSPNAAIHGFGSQLIPRPGELAAPPNQGGPFGGPSDGARPGHMISSTAQQSFNPSLQ--HAPPVGQQISPLQKPLQSPQHLPPSLQLHPQV-TSYSQTQTSHAGQ--------APFSQALPSQQYVGMSGQLSASQPQLQ 517 HSP 2 Score: 117.857 bits (294), Expect = 2.694e-24 Identity = 96/186 (51.61%), Postives = 111/186 (59.68%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQ-WAGMMPQAVGSAPAKTPGTDVPSSASAAMKPVV-ECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVA-PSPNDPSRFQ 1335 PSNQN L QNSQ +K Q W G+ PQ V S DVP S S A PV+ + WTEHTSP+GFKYY+NS+TRES+WEKPEELTLFEQQ QQ + Q+P Q Q Q Q+Q QTQ RH Q+Q +P++Y A GVR QQ QEL Y QLP A S NDPSR Q Sbjct: 597 PSNQN--LHQNSQPTKQQQWPGIAPQTVASTAPAALAADVPPSTSTA--PVIAQPVWTEHTSPEGFKYYYNSVTRESRWEKPEELTLFEQQPTQQLQQMQQKPPIQQPQTQSNPQALPTQQVPQVQQMPHQSQFQTQFRHQQQMQPASFPSSYAAPGVRVQQDAQELSYAQLPAASSSANDPSRIQ 778
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067K7Z5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19024 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.002e-33 Identity = 107/214 (50.00%), Postives = 133/214 (62.15%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVP-SSASAAMKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAPSP-NDPSRFQQGLQMVQDLAWKNKP*GT 1389 PSNQ +TLQQ SQ +K QW G+ PQ V S P T +D+P S++SA++ PV V+ +WTEHTSP+GFKYY+NS+TRES+WEKPEELTL+EQQ QQQQ Q Q + Q +Q QTQ Q Q RH QL P +P+ + ASGVR Q +QELGY QLP A S NDP+RF QGLQ Q+ WK+K G+ Sbjct: 602 PSNQGLTLQQASQHAKQQWPGIPPQTVASMPPTTLASDIPPSTSSASVAPVIPQPAAPVKGNWTEHTSPEGFKYYYNSVTRESRWEKPEELTLYEQQPQQQQHQQQQLLQQKPPVQQSQAQSNTQVLPAHQVPQAQQMPLQTQFQPQFRHQQQL--PSFPSPFAASGVRAQHDSQELGYAQLPAATSSVNDPTRFPQGLQASQEWMWKHKAAGS 813 HSP 2 Score: 124.405 bits (311), Expect = 2.226e-26 Identity = 82/169 (48.52%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585 FG+ MGDR P AWH MSPQ MGP+ N G+R G+QL+PRS DL++P N G P G G + + P V QISPLQKP+ SPQ PPS QLHPQ SYSQTQT A TPF+QA P Q G+SGQLSAS+P +Q SS Sbjct: 368 KFGEPMGDRGTPNAWHQMSPQNMGPSPNAGVRGFGSQLIPRSGDLSVPSNQGGPSDGAPQGLMGSSTAQPGFNQPLQQVP-----PPVSQQISPLQKPIQSPQRFPPSLQLHPQV-ASYSQTQTPLN-------AGQTPFTQAPPLQQYPGMSGQLSASQPQLQQGASS 523
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: M5Y3K5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002369mg PE=4 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 4.076e-25 Identity = 96/203 (47.29%), Postives = 113/203 (55.67%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQ---WAGMMPQAVGSAPAKTPGTDVPSSASAAMKPVVE------CHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPH-----QLQQPIY---PTAYPASGVRNQQSTQELGYGQLPVAPSPNDPSRFQQGLQMVQDLAWKNK 1377 PSNQ + L Q SQA+K Q W G++PQ V S A TP DVPS+ S A PV + C WTEHTSPDG+KYY+N+ T ES+WEKP E LFEQQQQQQ+ Q L A Q + Q PH LQQP + A ASG+ Q+ QE GY QLP S DP+ FQQGLQ Q+ WKNK Sbjct: 476 PSNQGLALHQISQATKQQQSQWTGVVPQTVASTAAATPAADVPSATSVA--PVTQTTAPAKCIWTEHTSPDGYKYYYNNATGESRWEKPAEFILFEQQQQQQKASVQQAHTPSLPQNLSAQQVSHNQQLHLQSQLQPHLRTNVHLQQPSFSSSYQASQASGIIGHQNVQEFGYSQLPTTRSVGDPTHFQQGLQTAQEWMWKNK 676 HSP 2 Score: 73.559 bits (179), Expect = 2.304e-10 Identity = 59/173 (34.10%), Postives = 70/173 (40.46%), Query Frame = 1 Query: 73 APNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQT-SHVGQLQVPPAS-HTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585 P+ GD M D++P AWHPMSP +GP+ N GIR G +P G+ PL HPQ P SYS TQT +GQ Q+ +S TPFSQALPSQ GL GQLS +P V N SS Sbjct: 283 VPSVGDPMNDQIPTHAWHPMSPPNLGPSPNAGIRGFGGHF----------------------------------------------LPRAGNMALPLNS--------------HPQTPASYSHTQTVRQLGQAQLSHSSGQTPFSQALPSQQFIGLGGQLSVPQPEVPKNASS 395
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: V7CAU6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G116400g PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.257e-25 Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 1 Query: 826 NQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSS--ASAAMKPV------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP---TAYPASGVRNQQSTQELGYGQL-PVAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389 +Q +TLQQN++A+K Q WAG + Q V S A P D PSS A++A++ + +C+WTEH SP+GFKYY+NS+T ES+WEKPEELTL+EQQQQ+ Q Q Q Q QQ P +++ A GV Q+ QE+GY QL P S DP R+ QG+ +L WKNKP G Sbjct: 530 SQALTLQQNAEATKKQSQWAGTVAQTVASTHATAPAADAPSSKLATSALQAINHNSAHAKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQQRVSVQQPQTQSQPSVLPAQQIPQFQQVQPQSHLQGQVLHQQQVQQPPLSSSFQAYGVTGPQNVQEVGYKQLQPTVISAGDPGRYSQGVHSTHELMWKNKPSGV 731 HSP 2 Score: 88.5817 bits (218), Expect = 4.910e-15 Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 79 NFGDAMGDRVPP-TAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570 N D MGDR+PP AW PM P MGP++N + MG +LPRS ++ +P N G P G V S + Q QIP + QISPLQK + S Q LPPS QL+PQAP+ Y Q GQ +PP++ L SQ + G+SGQ S+P Q Sbjct: 289 NITDPMGDRMPPPNAWRPMHPPNMGPSTNAALHGMGPPMLPRSGEM-VPTNAGGPMTGFGGPMDGRFQVQSMPSMSQQNFNQPMPQIPPLNQQISPLQKNIQSSQELPPSNQLYPQAPVPYPQASLRQHGQPLLPPSAG-----PLQSQQIHGVSGQFPTSQPQTQ 448
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A7LCT7_9LAMI (Flowering time control protein (Fragment) OS=Stenogyne rugosa PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.745e-24 Identity = 87/198 (43.94%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKT-PGTDVPSSASAAMKPVVECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAPS-PNDPSRFQQGLQMVQDLAWKNK 1377 P+NQN+T QQ +K Q WAG + Q V SAP P D+ +S S P C+W+EH SPDGFKYY+NSLT +SKWEKPEELTL+EQQQQQQ+ Q Q Q Q Q+ Q +H Q Q Y PA + +Q+LGY Q+P A DPSR+QQG+Q Q+ WKN+ Sbjct: 11 PANQNLTPQQGQLPAKQQTPWAGTLSQPVASAPGNNQPAGDLAASTSV---PATTCNWSEHMSPDGFKYYYNSLTGQSKWEKPEELTLYEQQQQQQKPSNQNPQVQSHPSGQSIQQAPQMQVQLQGHQQAQMHNQSKHFQQPAQSSYQV--PAYSAKQGTKSQDLGYAQVPTATGQATDPSRYQQGVQASQEWMWKNR 203
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: U5G1V1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s15770g PE=4 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 3.067e-24 Identity = 76/149 (51.01%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 76 PNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSH--VGQLQVPPASHTPFSQALPS 516 PN GD MGD +PP AW PMSPQ MGP+SN G+ GNQL PRS DLA+PLN Q NQS +P QISPLQKPL SPQ+LPPS QLH QA SY QTQTSH +G + PAS T Q + S Sbjct: 162 PNLGDPMGDHIPPNAWLPMSPQNMGPSSNAGVHGFGNQLPPRSGDLAMPLN-------------------------QTVNQSLQHLPPASQQISPLQKPLQSPQHLPPSLQLHAQAASSYPQTQTSHHMIGFGRQLPASQTEIQQGISS 285 HSP 2 Score: 89.7373 bits (221), Expect = 1.637e-15 Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASAAMKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFE 1080 PSNQ+ TLQQ+ QA + QW PQAV S P D+P S SA V V+C+WTEHTSP+GFKYY+N +T ES+WEKPEEL LFE Sbjct: 357 PSNQS-TLQQSPQAPRQQWP---PQAVASTPLPV---DLPPSTSAPTAGVMSQTVAPVKCNWTEHTSPEGFKYYYNGVTHESRWEKPEELKLFE 443
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A0B2P5G7_GLYSO (Flowering time control protein FCA OS=Glycine soja GN=glysoja_009743 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.041e-24 Identity = 98/211 (46.45%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 826 NQNMTLQQNSQASKHQ--WAGMMP--QAVGSAPAKTPGTDVPSS--ASAAMKPV------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAP-SPNDPSRFQQGLQMVQDLAWKNKP*GT*NWKL 1404 +Q +TLQQN++A+K Q WAG P Q V S A P DVPSS A++A+ + V+C+WTEH SP+GFKYY+NS+T ES+WEKPEELTL EQQ+QQQ+ Q QQ Q Q+ LQ Q+ H Q+QQP + + A GV Q+ QE+GY QL + S DP R+ QG+ Q+L WKNKP GT WK Sbjct: 442 SQALTLQQNAEANKKQSQWAGPGPVAQTVASTLAAAPAADVPSSTPANSALPAINQNMALVKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQRPSVQQSQTQSQPSILPAQQVPQIQQVQPQSHLQGQVLHQQQIQQPSLSSLFQAYGVTGPQNVQEVGYKQLQASVISAGDPGRYSQGIHSTQELMWKNKPAGT--WKC 650 HSP 2 Score: 110.923 bits (276), Expect = 3.417e-22 Identity = 79/165 (47.88%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 79 NFGDAMGDRVPPT-AWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570 N D MGDR+PP+ AWHP+ P MGP+SN G MG+ LLPRS D+A+P + G P V S S Q FNQ QIP V QISPLQKP+ S Q LPPS QL+PQAP+ Y QT GQ Q+ ++ LPSQ + G+SGQ S+P Q Sbjct: 199 NITDPMGDRMPPSNAWHPLHPPNMGPSSNAGFHGMGSPLLPRSGDMALPTDAGGPMTSLGGPIDGRFQVQSIPMSQQNFNQPMPQIPPVNQQISPLQKPVQSSQELPPSHQLYPQAPVPYPQTSLRQHGQPQLSLSAG-----PLPSQKIHGVSGQFLTSQPQTQ 358
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy Swiss-Prot
Match: FCA_ARATH (Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.040e-20 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 826 NQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASAAMKPV--VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFE 1080 NQN+ L QN +A K QWAG V S TP + V ++A A + V V+C WTEHTSPDGFKYY+N LT ESKWEKPEE+ +FE Sbjct: 543 NQNLPLSQNGRAGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFE 629 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021925 ID=g.arboreum_cottongen_reftransV1_0021925; Name=g.arboreum_cottongen_reftransV1_0021925; organism=Gossypium arboreum; type=contig; length=1803bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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