g.arboreum_cottongen_reftransV1_0021925, g.arboreum_cottongen_reftransV1_0021925 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0021925
Unique Nameg.arboreum_cottongen_reftransV1_0021925
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1803
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr9chromosomeg.arboreum_cottongen_reftransV1_0021925:1..1803 .
Chr9:60783245..60786729 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067G988_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005366mg PE=4 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.221e-37
Identity = 95/169 (56.21%), Postives = 111/169 (65.68%), Query Frame = 1
Query:   79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585
            NFGD + D++P  AWHPMSP+ MGP SNPGIR  GNQL PRS DL +PLNPG P   P  G     + S+   +         Q P++G QISPLQKPL SPQ++PP  QLHPQ P SYS TQ SH+ QLQ+P    T FSQALPSQHL G+SG L AS+P  Q   SS
Sbjct:   62 NFGDPITDQIPQNAWHPMSPRNMGPLSNPGIRGFGNQLPPRSGDLGMPLNPGGPADVPLPGLAVSSTSSALQQNFCQPES---QAPSLGQQISPLQKPLQSPQHMPP-LQLHPQVPSSYSHTQNSHLRQLQIP--GQTSFSQALPSQHLLGMSGNLPASQPQGQQIASS 224          

HSP 2 Score: 126.716 bits (317), Expect = 8.825e-28
Identity = 105/204 (51.47%), Postives = 120/204 (58.82%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSSASAA-MKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP--TAYPASGVRNQQSTQELGYGQLP--VAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389
            PSNQN+ LQQ SQ +K Q  WAG+ PQ V SAPA  P  D+P S S     PV        +  WTEHTSPDG+KYY+N +T  SKWEKPEELTLFEQQQQQQ+ P  Q P         A    Q Q           Q QQ  +P  ++Y A  VR Q + QELGY QLP   A S N+P+RFQQGLQ  QD  WKNKP GT
Sbjct:  303 PSNQNLPLQQGSQGTKQQSQWAGIAPQTVASAPASAPAADLPVSTSIGPAAPVSSQTVAPAKSSWTEHTSPDGYKYYYNCVTGVSKWEKPEELTLFEQQQQQQKPPVQQPPSQLHSQVLPAQHIPQTQQVQLQTQLRQQQQQQLQHPFSSSYQAPVVRGQHNAQELGYTQLPPVAAGSVNNPTRFQQGLQAAQDWMWKNKPSGT 506          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067FX43_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005366mg PE=4 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.412e-37
Identity = 95/169 (56.21%), Postives = 111/169 (65.68%), Query Frame = 1
Query:   79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585
            NFGD + D++P  AWHPMSP+ MGP SNPGIR  GNQL PRS DL +PLNPG P   P  G     + S+   +         Q P++G QISPLQKPL SPQ++PP  QLHPQ P SYS TQ SH+ QLQ+P    T FSQALPSQHL G+SG L AS+P  Q   SS
Sbjct:  256 NFGDPITDQIPQNAWHPMSPRNMGPLSNPGIRGFGNQLPPRSGDLGMPLNPGGPADVPLPGLAVSSTSSALQQNFCQPES---QAPSLGQQISPLQKPLQSPQHMPP-LQLHPQVPSSYSHTQNSHLRQLQIP--GQTSFSQALPSQHLLGMSGNLPASQPQGQQIASS 418          

HSP 2 Score: 126.716 bits (317), Expect = 3.513e-27
Identity = 105/204 (51.47%), Postives = 120/204 (58.82%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSSASAA-MKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP--TAYPASGVRNQQSTQELGYGQLP--VAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389
            PSNQN+ LQQ SQ +K Q  WAG+ PQ V SAPA  P  D+P S S     PV        +  WTEHTSPDG+KYY+N +T  SKWEKPEELTLFEQQQQQQ+ P  Q P         A    Q Q           Q QQ  +P  ++Y A  VR Q + QELGY QLP   A S N+P+RFQQGLQ  QD  WKNKP GT
Sbjct:  497 PSNQNLPLQQGSQGTKQQSQWAGIAPQTVASAPASAPAADLPVSTSIGPAAPVSSQTVAPAKSSWTEHTSPDGYKYYYNCVTGVSKWEKPEELTLFEQQQQQQKPPVQQPPSQLHSQVLPAQHIPQTQQVQLQTQLRQQQQQQLQHPFSSSYQAPVVRGQHNAQELGYTQLPPVAAGSVNNPTRFQQGLQAAQDWMWKNKPSGT 700          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: F6H711_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00710 PE=4 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.329e-35
Identity = 105/208 (50.48%), Postives = 122/208 (58.65%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASA------AMKPVVECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPH---QLQQPIY--------PTAYPASGVRNQQSTQELGYGQLPV-APSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389
            PSNQ +T QQ SQ +K QW G +PQ V S    TP TDVPS+ SA      A+ PV +C+WTEHTSPDG+KYYHNS+T ES+WEKPEELTL EQQQQQQ+    Q             Q  Q Q          H   QLQ  +         P +  ASGV  QQ+ QELGY Q  V A S NDP+RFQQGLQ  Q+  WKNKP G+
Sbjct:  579 PSNQTLTSQQGSQTTKQQWPGTVPQTVASTATITPATDVPSTTSAVPVTTQAVAPV-KCNWTEHTSPDGYKYYHNSVTGESRWEKPEELTLLEQQQQQQKSSVQQSQAQSHTQVLSTQQIPQAQQVQLQTQLQAHLQAQLQSQLRQHQQMQQPPVSSSASGVMGQQNVQELGYAQAQVGASSVNDPARFQQGLQAAQEWMWKNKPAGS 785          

HSP 2 Score: 130.183 bits (326), Expect = 2.620e-28
Identity = 93/179 (51.96%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   79 NFGDAMGD-RVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSH-----VGQLQVP-PASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585
            N GD +G  R+PP AW PMSPQ +GP+SN GI   GNQ LPRS D +I   PG P GG    +   LS  + S+S       +    Q+P++G QISPLQK L SPQ+LPPS QL  Q P SY+Q QT H      GQLQ+   A  TPF+Q LPSQ L GLSGQLS S+P VQ + SS
Sbjct:  322 NQGDPIGSGRIPPNAWRPMSPQNLGPSSNAGIHGFGNQSLPRSGDGSISSTPGVPLGGLGGSADGSLSGIAVSSSATSQQSFNQPMLQVPSIGEQISPLQKSLQSPQHLPPSLQLQSQTPASYTQPQTPHSSLRQFGQLQISHSAGQTPFNQTLPSQQLLGLSGQLSGSQPQVQQSASS 500          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: B9RZT3_RICCO (Flowering time control protein FCA, putative OS=Ricinus communis GN=RCOM_1001010 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.220e-34
Identity = 100/165 (60.61%), Postives = 115/165 (69.70%), Query Frame = 1
Query:   76 PNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570
            PNFGDA+GDRVPP+AW PMSPQ MGP+ N  I   G+QL+PR  +LA P N G PFGGPSDG+ PG  +SS++      +      P VG QISPLQKPL SPQ+LPPS QLHPQ   SYSQTQTSH GQ         PFSQALPSQ   G+SGQLSAS+P +Q
Sbjct:  364 PNFGDAVGDRVPPSAWRPMSPQDMGPSPNAAIHGFGSQLIPRPGELAAPPNQGGPFGGPSDGARPGHMISSTAQQSFNPSLQ--HAPPVGQQISPLQKPLQSPQHLPPSLQLHPQV-TSYSQTQTSHAGQ--------APFSQALPSQQYVGMSGQLSASQPQLQ 517          

HSP 2 Score: 117.857 bits (294), Expect = 2.694e-24
Identity = 96/186 (51.61%), Postives = 111/186 (59.68%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQ-WAGMMPQAVGSAPAKTPGTDVPSSASAAMKPVV-ECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVA-PSPNDPSRFQ 1335
            PSNQN  L QNSQ +K Q W G+ PQ V S        DVP S S A  PV+ +  WTEHTSP+GFKYY+NS+TRES+WEKPEELTLFEQQ  QQ +   Q+P  Q    Q   Q               Q+Q QTQ RH  Q+Q   +P++Y A GVR QQ  QEL Y QLP A  S NDPSR Q
Sbjct:  597 PSNQN--LHQNSQPTKQQQWPGIAPQTVASTAPAALAADVPPSTSTA--PVIAQPVWTEHTSPEGFKYYYNSVTRESRWEKPEELTLFEQQPTQQLQQMQQKPPIQQPQTQSNPQALPTQQVPQVQQMPHQSQFQTQFRHQQQMQPASFPSSYAAPGVRVQQDAQELSYAQLPAASSSANDPSRIQ 778          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A067K7Z5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19024 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.002e-33
Identity = 107/214 (50.00%), Postives = 133/214 (62.15%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVP-SSASAAMKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAPSP-NDPSRFQQGLQMVQDLAWKNKP*GT 1389
            PSNQ +TLQQ SQ +K QW G+ PQ V S P  T  +D+P S++SA++ PV       V+ +WTEHTSP+GFKYY+NS+TRES+WEKPEELTL+EQQ QQQQ    Q  Q +    Q  +Q                   QTQ Q Q RH  QL  P +P+ + ASGVR Q  +QELGY QLP A S  NDP+RF QGLQ  Q+  WK+K  G+
Sbjct:  602 PSNQGLTLQQASQHAKQQWPGIPPQTVASMPPTTLASDIPPSTSSASVAPVIPQPAAPVKGNWTEHTSPEGFKYYYNSVTRESRWEKPEELTLYEQQPQQQQHQQQQLLQQKPPVQQSQAQSNTQVLPAHQVPQAQQMPLQTQFQPQFRHQQQL--PSFPSPFAASGVRAQHDSQELGYAQLPAATSSVNDPTRFPQGLQASQEWMWKHKAAGS 813          

HSP 2 Score: 124.405 bits (311), Expect = 2.226e-26
Identity = 82/169 (48.52%), Postives = 96/169 (56.80%), Query Frame = 1
Query:   79 NFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585
             FG+ MGDR  P AWH MSPQ MGP+ N G+R  G+QL+PRS DL++P N G P  G   G +   +                  P V  QISPLQKP+ SPQ  PPS QLHPQ   SYSQTQT          A  TPF+QA P Q   G+SGQLSAS+P +Q   SS
Sbjct:  368 KFGEPMGDRGTPNAWHQMSPQNMGPSPNAGVRGFGSQLIPRSGDLSVPSNQGGPSDGAPQGLMGSSTAQPGFNQPLQQVP-----PPVSQQISPLQKPIQSPQRFPPSLQLHPQV-ASYSQTQTPLN-------AGQTPFTQAPPLQQYPGMSGQLSASQPQLQQGASS 523          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: M5Y3K5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002369mg PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.076e-25
Identity = 96/203 (47.29%), Postives = 113/203 (55.67%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQ---WAGMMPQAVGSAPAKTPGTDVPSSASAAMKPVVE------CHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPH-----QLQQPIY---PTAYPASGVRNQQSTQELGYGQLPVAPSPNDPSRFQQGLQMVQDLAWKNK 1377
            PSNQ + L Q SQA+K Q   W G++PQ V S  A TP  DVPS+ S A  PV +      C WTEHTSPDG+KYY+N+ T ES+WEKP E  LFEQQQQQQ+    Q     L     A Q +  Q         PH      LQQP +     A  ASG+   Q+ QE GY QLP   S  DP+ FQQGLQ  Q+  WKNK
Sbjct:  476 PSNQGLALHQISQATKQQQSQWTGVVPQTVASTAAATPAADVPSATSVA--PVTQTTAPAKCIWTEHTSPDGYKYYYNNATGESRWEKPAEFILFEQQQQQQKASVQQAHTPSLPQNLSAQQVSHNQQLHLQSQLQPHLRTNVHLQQPSFSSSYQASQASGIIGHQNVQEFGYSQLPTTRSVGDPTHFQQGLQTAQEWMWKNK 676          

HSP 2 Score: 73.559 bits (179), Expect = 2.304e-10
Identity = 59/173 (34.10%), Postives = 70/173 (40.46%), Query Frame = 1
Query:   73 APNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQT-SHVGQLQVPPAS-HTPFSQALPSQHLAGLSGQLSASRPLVQPNVSS 585
             P+ GD M D++P  AWHPMSP  +GP+ N GIR  G                                                 +P  G+   PL                HPQ P SYS TQT   +GQ Q+  +S  TPFSQALPSQ   GL GQLS  +P V  N SS
Sbjct:  283 VPSVGDPMNDQIPTHAWHPMSPPNLGPSPNAGIRGFGGHF----------------------------------------------LPRAGNMALPLNS--------------HPQTPASYSHTQTVRQLGQAQLSHSSGQTPFSQALPSQQFIGLGGQLSVPQPEVPKNASS 395          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: V7CAU6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G116400g PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.257e-25
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 1
Query:  826 NQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKTPGTDVPSS--ASAAMKPV------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYP---TAYPASGVRNQQSTQELGYGQL-PVAPSPNDPSRFQQGLQMVQDLAWKNKP*GT 1389
            +Q +TLQQN++A+K Q  WAG + Q V S  A  P  D PSS  A++A++ +       +C+WTEH SP+GFKYY+NS+T ES+WEKPEELTL+EQQQQ+      Q          Q   Q Q               QQ   P   +++ A GV   Q+ QE+GY QL P   S  DP R+ QG+    +L WKNKP G 
Sbjct:  530 SQALTLQQNAEATKKQSQWAGTVAQTVASTHATAPAADAPSSKLATSALQAINHNSAHAKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLYEQQQQRVSVQQPQTQSQPSVLPAQQIPQFQQVQPQSHLQGQVLHQQQVQQPPLSSSFQAYGVTGPQNVQEVGYKQLQPTVISAGDPGRYSQGVHSTHELMWKNKPSGV 731          

HSP 2 Score: 88.5817 bits (218), Expect = 4.910e-15
Identity = 69/166 (41.57%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   79 NFGDAMGDRVPP-TAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570
            N  D MGDR+PP  AW PM P  MGP++N  +  MG  +LPRS ++ +P N G P  G          V S  +  Q        QIP +  QISPLQK + S Q LPPS QL+PQAP+ Y Q      GQ  +PP++       L SQ + G+SGQ   S+P  Q
Sbjct:  289 NITDPMGDRMPPPNAWRPMHPPNMGPSTNAALHGMGPPMLPRSGEM-VPTNAGGPMTGFGGPMDGRFQVQSMPSMSQQNFNQPMPQIPPLNQQISPLQKNIQSSQELPPSNQLYPQAPVPYPQASLRQHGQPLLPPSAG-----PLQSQQIHGVSGQFPTSQPQTQ 448          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A7LCT7_9LAMI (Flowering time control protein (Fragment) OS=Stenogyne rugosa PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.745e-24
Identity = 87/198 (43.94%), Postives = 109/198 (55.05%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQ--WAGMMPQAVGSAPAKT-PGTDVPSSASAAMKPVVECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAPS-PNDPSRFQQGLQMVQDLAWKNK 1377
            P+NQN+T QQ    +K Q  WAG + Q V SAP    P  D+ +S S    P   C+W+EH SPDGFKYY+NSLT +SKWEKPEELTL+EQQQQQQ+                 Q     Q   Q   Q Q+  Q +H  Q  Q  Y    PA   +    +Q+LGY Q+P A     DPSR+QQG+Q  Q+  WKN+
Sbjct:   11 PANQNLTPQQGQLPAKQQTPWAGTLSQPVASAPGNNQPAGDLAASTSV---PATTCNWSEHMSPDGFKYYYNSLTGQSKWEKPEELTLYEQQQQQQKPSNQNPQVQSHPSGQSIQQAPQMQVQLQGHQQAQMHNQSKHFQQPAQSSYQV--PAYSAKQGTKSQDLGYAQVPTATGQATDPSRYQQGVQASQEWMWKNR 203          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: U5G1V1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s15770g PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.067e-24
Identity = 76/149 (51.01%), Postives = 85/149 (57.05%), Query Frame = 1
Query:   76 PNFGDAMGDRVPPTAWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSH--VGQLQVPPASHTPFSQALPS 516
            PN GD MGD +PP AW PMSPQ MGP+SN G+   GNQL PRS DLA+PLN                         Q  NQS   +P    QISPLQKPL SPQ+LPPS QLH QA  SY QTQTSH  +G  +  PAS T   Q + S
Sbjct:  162 PNLGDPMGDHIPPNAWLPMSPQNMGPSSNAGVHGFGNQLPPRSGDLAMPLN-------------------------QTVNQSLQHLPPASQQISPLQKPLQSPQHLPPSLQLHAQAASSYPQTQTSHHMIGFGRQLPASQTEIQQGISS 285          

HSP 2 Score: 89.7373 bits (221), Expect = 1.637e-15
Identity = 52/94 (55.32%), Postives = 62/94 (65.96%), Query Frame = 1
Query:  820 PSNQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASAAMKPV-------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFE 1080
            PSNQ+ TLQQ+ QA + QW    PQAV S P      D+P S SA    V       V+C+WTEHTSP+GFKYY+N +T ES+WEKPEEL LFE
Sbjct:  357 PSNQS-TLQQSPQAPRQQWP---PQAVASTPLPV---DLPPSTSAPTAGVMSQTVAPVKCNWTEHTSPEGFKYYYNGVTHESRWEKPEELKLFE 443          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Match: A0A0B2P5G7_GLYSO (Flowering time control protein FCA OS=Glycine soja GN=glysoja_009743 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.041e-24
Identity = 98/211 (46.45%), Postives = 126/211 (59.72%), Query Frame = 1
Query:  826 NQNMTLQQNSQASKHQ--WAGMMP--QAVGSAPAKTPGTDVPSS--ASAAMKPV------VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFEXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXIRHPHQLQQPIYPTAYPASGVRNQQSTQELGYGQLPVAP-SPNDPSRFQQGLQMVQDLAWKNKP*GT*NWKL 1404
            +Q +TLQQN++A+K Q  WAG  P  Q V S  A  P  DVPSS  A++A+  +      V+C+WTEH SP+GFKYY+NS+T ES+WEKPEELTL EQQ+QQQ+    Q                  QQ Q Q+ LQ Q+ H  Q+QQP   + + A GV   Q+ QE+GY QL  +  S  DP R+ QG+   Q+L WKNKP GT  WK 
Sbjct:  442 SQALTLQQNAEANKKQSQWAGPGPVAQTVASTLAAAPAADVPSSTPANSALPAINQNMALVKCNWTEHISPEGFKYYYNSVTGESRWEKPEELTLHEQQKQQQRPSVQQSQTQSQPSILPAQQVPQIQQVQPQSHLQGQVLHQQQIQQPSLSSLFQAYGVTGPQNVQEVGYKQLQASVISAGDPGRYSQGIHSTQELMWKNKPAGT--WKC 650          

HSP 2 Score: 110.923 bits (276), Expect = 3.417e-22
Identity = 79/165 (47.88%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   79 NFGDAMGDRVPPT-AWHPMSPQKMGPTSNPGIRSMGNQLLPRSADLAIPLNPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIPTVGHQISPLQKPLGSPQNLPPSFQLHPQAPMSYSQTQTSHVGQLQVPPASHTPFSQALPSQHLAGLSGQLSASRPLVQ 570
            N  D MGDR+PP+ AWHP+ P  MGP+SN G   MG+ LLPRS D+A+P + G P             V S   S Q FNQ   QIP V  QISPLQKP+ S Q LPPS QL+PQAP+ Y QT     GQ Q+  ++       LPSQ + G+SGQ   S+P  Q
Sbjct:  199 NITDPMGDRMPPSNAWHPLHPPNMGPSSNAGFHGMGSPLLPRSGDMALPTDAGGPMTSLGGPIDGRFQVQSIPMSQQNFNQPMPQIPPVNQQISPLQKPVQSSQELPPSHQLYPQAPVPYPQTSLRQHGQPQLSLSAG-----PLPSQKIHGVSGQFLTSQPQTQ 358          
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy Swiss-Prot
Match: FCA_ARATH (Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.040e-20
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  826 NQNMTLQQNSQASKHQWAGMMPQAVGSAPAKTPGTDVPSSASAAMKPV--VECHWTEHTSPDGFKYYHNSLTRESKWEKPEELTLFE 1080
            NQN+ L QN +A K QWAG     V S    TP + V ++A A  + V  V+C WTEHTSPDGFKYY+N LT ESKWEKPEE+ +FE
Sbjct:  543 NQNLPLSQNGRAGKQQWAGSAIPRVASTTGSTPVSYVQTAAPAVSQSVGSVKCTWTEHTSPDGFKYYYNGLTGESKWEKPEEMIVFE 629          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067G988_CITSI1.221e-3756.21Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A067FX43_CITSI2.412e-3756.21Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
F6H711_VITVI2.329e-3550.48Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RZT3_RICCO9.220e-3460.61Flowering time control protein FCA, putative OS=Ri... [more]
A0A067K7Z5_JATCU1.002e-3350.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5Y3K5_PRUPE4.076e-2547.29Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
V7CAU6_PHAVU6.257e-2542.08Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A7LCT7_9LAMI1.745e-2443.94Flowering time control protein (Fragment) OS=Steno... [more]
U5G1V1_POPTR3.067e-2451.01Uncharacterized protein (Fragment) OS=Populus tric... [more]
A0A0B2P5G7_GLYSO6.041e-2446.45Flowering time control protein FCA OS=Glycine soja... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0021925 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FCA_ARATH1.040e-2056.32Flowering time control protein FCA OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 292..324
e-value: 7.1E-9
score: 45.5
IPR001202WW domainPFAMPF00397WWcoord: 296..322
e-value: 3.9E-9
score: 36.2
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 291..324
score: 12.236
IPR001202WW domainSUPERFAMILY51045WW domaincoord: 296..329
NoneNo IPR availableGENE3D2.20.70.10coord: 295..325
e-value: 6.6E-15
score: 53.7

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0021925 ID=g.arboreum_cottongen_reftransV1_0021925; Name=g.arboreum_cottongen_reftransV1_0021925; organism=Gossypium arboreum; type=contig; length=1803bp
TCAAGGGGTGGTGCTGCTGCATTTGGAGGTCCAGGTTTTGGTCCTCGTTT
CCAAACACCAAGGCCTAGACCAGCACCCAACTTTGGTGATGCAATGGGGG
ATCGTGTTCCACCTACTGCTTGGCACCCTATGAGTCCACAGAAAATGGGA
CCAACTTCTAATCCTGGCATTCGGAGTATGGGGAACCAGTTGCTACCTAG
GTCTGCTGACCTAGCAATACCTTTAAATCCAGGTGCTCCTTTTGGTGGCC
CTTCAGATGGTTCTCTTCCTGGCCTTTCAGTTTCATCTTCATCTACTTCA
GTACAGGGATTTAATCAATCTTCATCACAAATTCCAACTGTTGGTCATCA
GATTTCACCTTTACAGAAGCCCCTTGGTTCACCACAGAATCTACCGCCTT
CCTTTCAACTACACCCGCAAGCACCTATGTCATACTCGCAGACACAAACT
TCACATGTTGGTCAACTTCAAGTTCCTCCTGCTAGTCATACTCCCTTCAG
TCAAGCTCTTCCCTCACAACATTTAGCTGGTTTGAGTGGCCAGTTGTCTG
CGTCTCGGCCACTGGTTCAGCCGAATGTTTCATCTGGTGCAGCACTACAA
AACCCTTTGAATGTCAACTTACCGCCCAATTCTGCGGCCAGTGCTGCAAA
TCAACAACAGTTACCTGCTCCTAACCAGCAGCAGCCGCTGCAACCACTTC
AGCAATCCCCTTCTCAGCTAGCGCAGATGCTGTCTCAACAAACACAAACT
CTGCAAGCAAGCTTCCAATCATCTCAGCAGGCATTTTCTCAGCTGCAGCA
ACAATTGCAGCTGATGCAACCTTCAAATCAAAATATGACATTGCAGCAGA
ATTCTCAGGCTTCTAAACATCAGTGGGCTGGTATGATGCCGCAGGCTGTT
GGCAGCGCTCCTGCCAAAACACCTGGTACAGATGTTCCTTCATCTGCATC
TGCTGCTATGAAACCGGTAGTAGAATGTCATTGGACAGAGCATACTTCAC
CTGACGGGTTCAAATACTATCATAACAGTCTAACACGTGAAAGCAAGTGG
GAGAAGCCCGAAGAATTAACTTTGTTTGAACAACAGCAGCAGCAACAACA
AAAGCCACCTGTTCAACAACCTCAAACTCAGTTACATGCTGCTCAGCAAG
CTTCACAACAGGCACAGCTGCAAACCCAGCTTCAGACACAGATTCGCCAT
CCTCACCAGTTACAGCAGCCTATCTATCCCACAGCGTATCCAGCTTCTGG
AGTTAGAAATCAACAAAGTACACAGGAACTTGGTTACGGACAATTACCAG
TGGCACCATCACCCAATGATCCATCACGATTCCAACAGGGGCTTCAGATG
GTACAGGATTTAGCATGGAAGAATAAGCCATAAGGGACTTGAAATTGGAA
GCTGAGGAGAGTCTCCTAGGGGGAATCGTGTTTCTTTTAGAAGAATGCCG
GGCGATCATAAAAACACAAATAGTCATGGCAAATGGCAATGGCATGGATG
CAGCAGCAACCCATTTTAAGCTAAAATGCCTGGCAGATGAGATGTGTAAT
AATAGAAGCTACAATATATGTAATAGTAAATCTTCTCAGAATTTAGTGTG
GTAAAAAGCCTTTGCTTGGTTACAGGCATTTTATGCTTTTGCCATTAAAT
ATTAGGGCAATGAAAGCCATCTGTATTTGTGTAACATAATATAAGTTCCT
ATAATAACCCGATACTTAGAAAAAAGAACTCTCGTTTTTGCTCTGAAATG
TCGACATACATCACCCTCCCAAGTTAGATTCTGGTCATTAGTTCTTTATT
TTG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding