g.arboreum_cottongen_reftransV1_0008529, g.arboreum_cottongen_reftransV1_0008529 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: B9SBH4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0718350 PE=4 SV=1) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 291/389 (74.81%), Postives = 336/389 (86.38%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLG 1168 +KL FF+GLE+ VE ENEKL +HE+LHSNIENLDYGADGISL+D PEK IPRWKGPPL ++PEFL+NFQ QR + G +Y K D Q +QK ES +ED A S SES L + +H+ D K K +IE SDGS+K GKKSGKE+WQHTKKWSRGFLE NAETDPE+KSIMKDMGKDLDRWITE+E+QEAADLMKKLPER+K+FMEKK+ K+KREMELFGPQAVVSKY+EYAEEKEEDYLWWLDLPH+LCIELYT +N Q+IGFY+LEM ADLELEPKP HVIAFED GDCK+FCYI+QAH+DMLGNG AF+VP+PPKDAFR+AKA+GFGVTVI+K EL+LNVDQTLEEVEEQI EIGSKMYHD++MRERS+DIS+LMKG+ G Sbjct: 726 DKLKFFKGLEENVEKENEKLLKVHEYLHSNIENLDYGADGISLYDQPEKFIPRWKGPPLGENPEFLNNFQNQRTGI-AGNADTSYLGK-DEQ--IQKSIES-TDEDAATSLSESVLEKNLHNKDAKHSKTIIEGSDGSIKAGKKSGKEFWQHTKKWSRGFLESCNAETDPEIKSIMKDMGKDLDRWITEEEIQEAADLMKKLPERSKEFMEKKMTKIKREMELFGPQAVVSKYREYAEEKEEDYLWWLDLPHILCIELYTTQNGEQKIGFYSLEMGADLELEPKPCHVIAFEDAGDCKNFCYIVQAHMDMLGNGHAFVVPRPPKDAFRDAKASGFGVTVIRKRELELNVDQTLEEVEEQIAEIGSKMYHDELMRERSIDISALMKGVFG 1109
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: M4CGY9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra003472 PE=4 SV=1) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 279/394 (70.81%), Postives = 332/394 (84.26%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPP--LEKSPEFLSNFQEQRKALFTGKVG-MTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEG-QRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 +K F QGLEKKVE ENEKLSHLH+W+HSN+ENLDYG DGIS++DPPEK+IPRWKGPP LEK+PEFL N+ EQR+ALF+GK ++ P K++ QS L +E+ + ++SS+ PKIV+E SDGS++PGKKSGKE+WQHTKKWS GFLE YNAETDPEVK++M+DMGKDLDRWITE E+++ AD+M+KLPERNKKFMEKKLNK+KREMELFGPQAV+SKY+EY E+KEEDYLWWLDLPHVLC+ELYT + +G Q++GFY LEMA DLELEPKPHHVIAFE+ DCK+ CYI+QAHLDML G FIVP+PPKD FREAKANGFGVTVI+KGEL+LN+D+ LEEVEEQICEIGSKMYHDKIM +RSVDISSLMKG+ + Sbjct: 690 DKAMFLQGLEKKVEKENEKLSHLHQWIHSNVENLDYGVDGISVYDPPEKVIPRWKGPPPTLEKNPEFLKNYNEQREALFSGKAASVSPPVKKEEQSSLHTSSENTLTSSSEVTSSQ--------------PKIVVEGSDGSIRPGKKSGKEFWQHTKKWSPGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDVADIMEKLPERNKKFMEKKLNKVKREMELFGPQAVLSKYREYGEDKEEDYLWWLDLPHVLCLELYTVDEKGEQQVGFYTLEMAKDLELEPKPHHVIAFENAADCKNLCYIIQAHLDMLRTGNVFIVPRPPKDTFREAKANGFGVTVIRKGELKLNIDEPLEEVEEQICEIGSKMYHDKIMGDRSVDISSLMKGVFNL 1069
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A078BVR8_BRANA (BnaA07g19040D protein OS=Brassica napus GN=BnaA07g19040D PE=4 SV=1) HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0 Identity = 283/389 (72.75%), Postives = 335/389 (86.12%), Query Frame = 2 Query: 17 FQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPP--LEKSPEFLSNFQEQRKALFTGKVG-MTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEG-QRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 GLEKKVE ENEKLSHLH+W+HSN+ENLDYG DGIS++DPPEK+IPRWKGPP LEKSPEFL+N+ EQR+ALF+GK ++ P K++ Q+ LQ+ ++SP +E+ SSSE+ ++ PKIV+E SDGSVKPGKKSGKE+WQHTKKWS GFLE YNAETDPEVK+ M+DMGKDLDRWITE E+++ AD+M+KLPERNKKFMEKKLNK+KREMELFGPQAV+SKY+EY E+KEEDYLWWLDLPHVLC+ELYT + +G Q++GFY LEMA DLELEPKPHHVIAFE+ DCK+ CYI+QAHLDML G FIVP+PPKD FREAKANGFGVTVI+KGEL+LN+D+ LEEVEEQICEIGSKMYHDKIM +RSVDISSLMKG+ + Sbjct: 631 LAGLEKKVEKENEKLSHLHQWIHSNVENLDYGVDGISVYDPPEKVIPRWKGPPPTLEKSPEFLNNYNEQREALFSGKAASVSPPVKKEEQNCLQEASQSPSSENTLTSSSETTSSQ---------PKIVVEGSDGSVKPGKKSGKEFWQHTKKWSPGFLELYNAETDPEVKAAMRDMGKDLDRWITEDEIKDVADIMEKLPERNKKFMEKKLNKVKREMELFGPQAVLSKYREYGEDKEEDYLWWLDLPHVLCLELYTVDEKGEQQVGFYTLEMAKDLELEPKPHHVIAFENAADCKNLCYIIQAHLDMLRTGNVFIVPRPPKDTFREAKANGFGVTVIRKGELKLNIDEPLEEVEEQICEIGSKMYHDKIMGDRSVDISSLMKGVFNL 1010
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A059CJS7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02379 PE=4 SV=1) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 274/390 (70.26%), Postives = 328/390 (84.10%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 +K AFF GLEKKVE NE+L +HE+LHSNIENLDYGADGIS++DP EKIIPRWK PP+E+ P+F++ +++KA TG+ ++ K+D ++ + S N + A SS + + D K KI+IE SDGSV+ GKKSGKEYWQHTKKWSRGFL+ YNAETDPEVKS+MKD+GKDLDRWITEKE+QEAA+LM KLPERNK+++ KKLNKLKREMELFGPQAVVSKY+EYAE+K+EDYLWWLDLPHVLCIELYT +N Q++GFY+LEMAADLELEPKPHHVIAFED GDCK+ CYI+QAH+DML NG+AFIVP PPKDAFREA+ANGFGVT+++KGE+QLNVDQ LEEVEEQI EIGSK+YHDKIM+ERSVDI +LM G+ G Sbjct: 519 DKRAFFAGLEKKVEKVNEELLKVHEYLHSNIENLDYGADGISIYDPVEKIIPRWKEPPVERKPDFVNGHLKEKKASMTGETQVSPLMKKDEKNSVDNSAGSQGNGN-ATSSLTVNSVNNIQSKDPKKTKILIEGSDGSVRTGKKSGKEYWQHTKKWSRGFLDSYNAETDPEVKSVMKDIGKDLDRWITEKEIQEAAELMDKLPERNKEYIGKKLNKLKREMELFGPQAVVSKYREYAEDKDEDYLWWLDLPHVLCIELYTHQNGEQKVGFYSLEMAADLELEPKPHHVIAFEDAGDCKNLCYIIQAHMDMLENGQAFIVPLPPKDAFREAQANGFGVTIVRKGEIQLNVDQPLEEVEEQITEIGSKIYHDKIMQERSVDIGALMTGVFGA 907
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A078GI96_BRANA (BnaC06g18180D protein OS=Brassica napus GN=BnaC06g18180D PE=4 SV=1) HSP 1 Score: 543.888 bits (1400), Expect = 1.775e-180 Identity = 275/389 (70.69%), Postives = 328/389 (84.32%), Query Frame = 2 Query: 17 FQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPP--LEKSPEFLSNFQEQRKALFTGKVG-MTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEG-QRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 GLEKKVE ENEKLSHLH+W+HSN+ENLDYG DGIS++DPPEK+IPRWKGPP LEKSP+FL+N+ EQR+ALF+GK ++ P K++ Q+ L +E+ + ++SS PKIV+E SDGSV+PGKKSGKE+WQHTKKWS GFLE YNAETDPEVK++M+DMGKDLDRWITE E+++ AD+M+KLPERNKKFMEKKLNK+KREMELFGPQAV+SKY+EY E+KEEDYLWWLDLPHVLC+ELYT +++G Q++GFY LEMA DLELEPKPHHVIAFE+ DCK+ CYI+QAHLDML G FIVP+PPKD REAKANGFGVTVI+KGEL+LN+D+ LEEVEEQICEIGSKMYHDKIM +RSVDISSLMKG+ + Sbjct: 618 LAGLEKKVEKENEKLSHLHQWIHSNVENLDYGVDGISVYDPPEKVIPRWKGPPPTLEKSPKFLNNYNEQREALFSGKAASVSPPVKKEEQNSLHASSENTLTSSSEVTSSH--------------PKIVVEGSDGSVRPGKKSGKEFWQHTKKWSPGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDVADIMEKLPERNKKFMEKKLNKVKREMELFGPQAVLSKYREYGEDKEEDYLWWLDLPHVLCLELYTVDDKGEQQVGFYTLEMAKDLELEPKPHHVIAFENAADCKNLCYIIQAHLDMLRTGNVFIVPRPPKDTIREAKANGFGVTVIRKGELKLNIDEPLEEVEEQICEIGSKMYHDKIMGDRSVDISSLMKGVFNL 992
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A0D3CV92_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 542.732 bits (1397), Expect = 4.244e-179 Identity = 283/394 (71.83%), Postives = 333/394 (84.52%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPP--LEKSPEFLSNFQEQRKALFTGKVG-MTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEG-QRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 +K F QGLEKKVE ENEKLSHLH+W+HSN+ENLDYG DGIS++DPPEK+IPRWKGPP LEKSPEFL+N+ EQR+ALF+GK ++ P K++ QS L +SSE+ LT T ++ PKIV+E SDGSVKPGKKSGKE+WQHTKKWS GFLE YNAETDPEVK++M+DMGKDLDRWITE E+++ AD+M+KLPERNKKFMEKKLNK+KREMELFGPQAV+SKY+EY E+KEEDYLWWLDLPHVLC+ELYT +++G Q++GFY LEMA DLELEPK HHVIAFE+ DCK+ CYI+QAHLDML G FIVP+PPKD FREAKANGFGVTVI+KGEL+LN+D+ LEEVEEQICEIGSKMYHDKIM +RSVDISSLMK + + Sbjct: 690 DKAMFLQGLEKKVEKENEKLSHLHQWIHSNVENLDYGVDGISVYDPPEKVIPRWKGPPPTLEKSPEFLNNYNEQREALFSGKAASVSPPVKKEEQSSLH-------------ASSENTLTSSSETTSSE-PKIVVEGSDGSVKPGKKSGKEFWQHTKKWSPGFLELYNAETDPEVKAVMRDMGKDLDRWITEDEIKDVADIMEKLPERNKKFMEKKLNKVKREMELFGPQAVLSKYREYGEDKEEDYLWWLDLPHVLCLELYTVDDKGEQQVGFYTLEMAKDLELEPKSHHVIAFENAADCKNLCYIIQAHLDMLRTGNVFIVPRPPKDTFREAKANGFGVTVIRKGELKLNIDEPLEEVEEQICEIGSKMYHDKIMGDRSVDISSLMKSVFNL 1069
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: K7MET9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 545.428 bits (1404), Expect = 5.212e-178 Identity = 280/397 (70.53%), Postives = 330/397 (83.12%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTD-----TKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1177 +K FF+GLEKKVE EN+KLS +HEWLHSNIENLDYGADGIS++DPPEKIIPRWKGPP+EK PEFL+ F +++K T + P K+D F AI+S++S L KV + +K+PK +IE SDGS+K GKKSGKEYWQHTKKWS+GFL+CYN ETDPEVKSIMKDMGK LDRWITEKE++EAA+LM KLP+RN+ FMEKKLNK+KREMELFGPQAVVSKY+EYA++KEEDYLWWLDL HVLCIELYT EN Q++G Y+LEMA+DLELEPKP+HVIAF+D DCK+ CYI+QAH++MLGNG AF+V +PPKDAFREAKANGFGVTVIKKGELQLN+DQ LEEVEEQI EIGSKMYHD +M+ERSVDI++LMKG+ G D Sbjct: 912 DKDTFFRGLEKKVEKENKKLSDIHEWLHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEKIPEFLNEFLDEKKTSSTRNMN---PVKKDESGF-------------AITSADSSLQEKVDGSTAPIKKSKNPKTIIEGSDGSIKVGKKSGKEYWQHTKKWSQGFLDCYNDETDPEVKSIMKDMGKGLDRWITEKEIEEAAELMDKLPDRNRSFMEKKLNKIKREMELFGPQAVVSKYREYADDKEEDYLWWLDLSHVLCIELYTVENGEQKVGLYSLEMASDLELEPKPYHVIAFQDPNDCKNLCYIIQAHMEMLGNGHAFVVARPPKDAFREAKANGFGVTVIKKGELQLNIDQPLEEVEEQISEIGSKMYHDMMMKERSVDINTLMKGVFGFSD 1292
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A0B2Q7B3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_013144 PE=4 SV=1) HSP 1 Score: 545.428 bits (1404), Expect = 5.212e-178 Identity = 280/397 (70.53%), Postives = 330/397 (83.12%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTD-----TKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGVGD 1177 +K FF+GLEKKVE EN+KLS +HEWLHSNIENLDYGADGIS++DPPEKIIPRWKGPP+EK PEFL+ F +++K T + P K+D F AI+S++S L KV + +K+PK +IE SDGS+K GKKSGKEYWQHTKKWS+GFL+CYN ETDPEVKSIMKDMGK LDRWITEKE++EAA+LM KLP+RN+ FMEKKLNK+KREMELFGPQAVVSKY+EYA++KEEDYLWWLDL HVLCIELYT EN Q++G Y+LEMA+DLELEPKP+HVIAF+D DCK+ CYI+QAH++MLGNG AF+V +PPKDAFREAKANGFGVTVIKKGELQLN+DQ LEEVEEQI EIGSKMYHD +M+ERSVDI++LMKG+ G D Sbjct: 912 DKDTFFRGLEKKVEKENKKLSDIHEWLHSNIENLDYGADGISIYDPPEKIIPRWKGPPVEKIPEFLNEFLDEKKTSSTRNMN---PVKKDESGF-------------AITSADSSLQEKVDGSTAPIKKSKNPKTIIEGSDGSIKVGKKSGKEYWQHTKKWSQGFLDCYNDETDPEVKSIMKDMGKGLDRWITEKEIEEAAELMDKLPDRNRSFMEKKLNKIKREMELFGPQAVVSKYREYADDKEEDYLWWLDLSHVLCIELYTVENGEQKVGLYSLEMASDLELEPKPYHVIAFQDPNDCKNLCYIIQAHMEMLGNGHAFVVARPPKDAFREAKANGFGVTVIKKGELQLNIDQPLEEVEEQISEIGSKMYHDMMMKERSVDINTLMKGVFGFSD 1292
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: F6I6E5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g00420 PE=4 SV=1) HSP 1 Score: 540.421 bits (1391), Expect = 1.177e-177 Identity = 284/389 (73.01%), Postives = 329/389 (84.58%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLG 1168 +K AFF+GLE+KVE ENEKL +LH W+HSN+EN+DYG DGISL+DPP+KIIPRWKGPP+EK PEFL+NF EQRK F G YP K D Q LQ+ ES +E + SS+ D +K HD +K K +IESSDGS+K KKSGKEYWQHTKKWS GFLE YNAETDPEVKS MKD+GKDLDRWIT+KE+QE+ADL+ K+ ERNKKFMEK+L KLKREMELFGPQAVVSKY+E+ +EKEEDYLWWLD+P VLCIELYT ENE ++GFY+LEMAADLELEPK +HVIAFED GDCK+ CYI+QAH+DMLGNG AF+V +PPKDAFREAK NGF VTVI+KG+LQLNVDQTLEEVEEQI EIGSK+YHDKI +ERSVDIS+LMKG+ G Sbjct: 739 DKAAFFKGLERKVEKENEKLLNLHGWIHSNVENIDYGTDGISLYDPPDKIIPRWKGPPIEKDPEFLNNFVEQRKVFFAENAGSHYPMKNDEQVSLQESKESLPHESPSTSSAVFDPKKKFHDGASKRSKTIIESSDGSIKASKKSGKEYWQHTKKWSHGFLESYNAETDPEVKSAMKDIGKDLDRWITDKEIQESADLITKMRERNKKFMEKRLEKLKREMELFGPQAVVSKYREFGDEKEEDYLWWLDVPFVLCIELYTTENEEHKVGFYSLEMAADLELEPKQYHVIAFEDPGDCKNLCYIIQAHMDMLGNGHAFVVARPPKDAFREAKGNGFSVTVIRKGQLQLNVDQTLEEVEEQIIEIGSKIYHDKITQERSVDISALMKGVFG 1127
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Match: A0A068UJR0_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_35 OS=Coffea canephora GN=GSCOC_T00027717001 PE=4 SV=1) HSP 1 Score: 531.946 bits (1369), Expect = 2.226e-176 Identity = 268/390 (68.72%), Postives = 323/390 (82.82%), Query Frame = 2 Query: 2 EKLAFFQGLXXXXXXXXXXLSHLHEWLHSNIENLDYGADGISLHDPPEKIIPRWKGPPLEKSPEFLSNFQEQRKALFTGKVGMTYPAKRDGQSFLQKPTESPINEDLAISSSESDLTRKVHDTDTKDPKIVIESSDGSVKPGKKSGKEYWQHTKKWSRGFLECYNAETDPEVKSIMKDMGKDLDRWITEKEVQEAADLMKKLPERXXXXXXXXXXXXXREMELFGPQAVVSKYQEYAEEKEEDYLWWLDLPHVLCIELYTFENEGQRIGFYALEMAADLELEPKPHHVIAFEDTGDCKSFCYIMQAHLDMLGNGRAFIVPQPPKDAFREAKANGFGVTVIKKGELQLNVDQTLEEVEEQICEIGSKMYHDKIMRERSVDISSLMKGMLGV 1171 +K+AF+ GLEKKVE EN KL++LHEW+HSNIENLDYGADGISL+DPPEKIIPRW+G P+EK PEFL N Q K L V + K++ + LQ ES E A+ + + +K K + V+E SDGSV+ GKKSGKEYWQHT+KWS GFLE YNAETDPEVK+IM+DMGKDLDRWITEKE++EAADLM KLPER ++ +++KLNK+KREME+FGPQAVVSKY+EYA+EKEEDYLWWLDLP+VLCIELYT + Q+IG Y+LEMAADLEL+PK +HVIAFED GDCK+ CYI+QAH++MLGNG AF+V +PPKDAFREAK+NGFGV+VI+KG++QLNVDQ+LEEVEE I EIGSK+YHDKIMRERSVDI+ LMKG+ GV Sbjct: 561 DKIAFYSGLEKKVEQENAKLANLHEWVHSNIENLDYGADGISLYDPPEKIIPRWRGHPVEKIPEFLKNSSAQPKELVPDNVRKSNITKQNEEDSLQLSKESSSGEASALCNEYTKPQKKT----PKTLRTVVEGSDGSVRAGKKSGKEYWQHTRKWSHGFLESYNAETDPEVKAIMRDMGKDLDRWITEKEIKEAADLMDKLPERGQELIKEKLNKVKREMEVFGPQAVVSKYREYADEKEEDYLWWLDLPYVLCIELYTEQEGEQKIGLYSLEMAADLELDPKQYHVIAFEDAGDCKNMCYIIQAHMEMLGNGNAFVVARPPKDAFREAKSNGFGVSVIRKGQVQLNVDQSLEEVEELIAEIGSKIYHDKIMRERSVDINGLMKGVFGV 946 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0008529 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0008529 ID=g.arboreum_cottongen_reftransV1_0008529; Name=g.arboreum_cottongen_reftransV1_0008529; organism=Gossypium arboreum; type=contig; length=1357bpback to top |