g.arboreum_cottongen_reftransV1_0006478, g.arboreum_cottongen_reftransV1_0006478 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A078ENA4_BRANA (BnaA03g39830D protein OS=Brassica napus GN=BnaA03g39830D PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 253/323 (78.33%), Postives = 282/323 (87.31%), Query Frame = 2 Query: 179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 ME+ S ++ +SK+ ++FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHI +PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDP AASSFQ+SVGAAGTTNKTVRVPRNFTL PGPGYTCGPAKIV+PT+F+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+ + HLAS V K T PPL+QCT H+CP+R+HWHVK NYKEYWRVKITITNF Sbjct: 1 MESFISRSTSIVSKMSFLAVGIVFLVSSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIPSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNLPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPGTAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTQFVTPDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNKTESGACLDPDTPHLASVVSPPTKKGTILPPLVQCTRHLCPIRVHWHVKQNYKEYWRVKITITNF 323
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A0D3DDH0_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 253/323 (78.33%), Postives = 282/323 (87.31%), Query Frame = 2 Query: 179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 ME+ S ++ +SK+ ++FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHI +PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDP AASSFQ+SVGAAGTTNKTVRVPRNFTL PGPGYTCGPAKIV+PT+F+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+ + HLAS V K T PPL+QCT H+CP+R+HWHVK NYKEYWRVKITITNF Sbjct: 1 MESFISRSTSIVSKMSFLAVGIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIPSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNLPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPGTAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTQFVTPDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNKTESGACLDPDTPHLASVVSPPTKKGTILPPLVQCTRHLCPIRVHWHVKQNYKEYWRVKITITNF 323
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: M5W9K2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024172mg PE=4 SV=1) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 248/286 (86.71%), Postives = 267/286 (93.36%), Query Frame = 2 Query: 281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 EAYDALDPTGNITIKWDVISWTPDGYVAVVTM+NFQQYRHIQ PGWTLGWTWAKKEVIWSM+G+QTTEQGDCS+YKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSW+QDPANA SSFQ+SVGAAGTTNKTVR+P+NFTLKAPGPGY+CG AKIVKPT+F+TADKRR TQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYN TIV+CPTCACGCQNN+T+ GSCV GKSTNA PL+QCTSHMCPVR+HWHVK+NYKEYWRVK+TITNF Sbjct: 35 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMFNFQQYRHIQTPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSRYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWIQDPANAISSFQISVGAAGTTNKTVRLPKNFTLKAPGPGYSCGIAKIVKPTRFLTADKRRWTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNATDPGSCVDCIGP-------GKSTNA-PLVQCTSHMCPVRVHWHVKINYKEYWRVKVTITNF 312
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: K4B708_SOLLC (COBRA protein OS=Solanum lycopersicum GN=Solyc02g065770.2 PE=2 SV=1) HSP 1 Score: 526.554 bits (1355), Expect = 0.000e+0 Identity = 245/288 (85.07%), Postives = 264/288 (91.67%), Query Frame = 2 Query: 281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV--LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 +A+DALDP GNITIKWDVISWTPDGYVAVVTM+NFQQYRHIQAPGWTLGWTWAKKEVIW MMG+QTTEQGDCSK+KGN+PHCCK+DPTVVDLLPGTPYNQQIANCCKGGV+NSW QDP A SSFQVSVGAAGTTNKTVRVP+NFTLKAPGPGYTCGPAK+VKPTKF + D RRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV CPTC CGCQ N T+ G+CV + HLAS V LGK+ N PL+QCTSHMCP+RIHWHVKLNYKEYWRVK+TITNF Sbjct: 23 DAFDALDPNGNITIKWDVISWTPDGYVAVVTMFNFQQYRHIQAPGWTLGWTWAKKEVIWGMMGAQTTEQGDCSKFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVINSWGQDPETAVSSFQVSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVVKPTKFSSGDGRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCTCGCQKNGTQHGNCVDQDEPHLASVVSGLGKN-NYAPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNF 309
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: M0S2Q7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0 Identity = 243/287 (84.67%), Postives = 265/287 (92.33%), Query Frame = 2 Query: 281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 EAYD+LDP GNITIKWD++ WTPDGYVAVVT++NFQQYRHIQAPGW LGWTWAKKEVIWSM+G+QTTEQGDCS++KGN PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVGAAGTTNKTVRVP+NFTL+APGPGYTCG AKIVKPTKF+T D RR TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIVNCPTC CGCQNN+T+ GSCV S +LAS + G N+ PL+QCTSHMCPVR+HWHVKLNYKEYWRVKI ITNF Sbjct: 40 EAYDSLDPNGNITIKWDIMQWTPDGYVAVVTIFNFQQYRHIQAPGWILGWTWAKKEVIWSMVGAQTTEQGDCSRFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVRVPKNFTLRAPGPGYTCGIAKIVKPTKFVTQDGRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNATQPGSCVEGDSPYLASVINGPGKNSFTPLVQCTSHMCPVRVHWHVKLNYKEYWRVKIAITNF 326
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 403.675 bits (1036), Expect = 1.605e-136 Identity = 187/288 (64.93%), Postives = 227/288 (78.82%), Query Frame = 2 Query: 284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCS--KYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKST-NAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 AYD+LDP GNITIKWDV+ WTPDGY AVVT+ N+QQ+RHIQ PGW LGWTW +KEVIWSM G+Q EQGDCS K NVPH CKK PTVVDLLPG P + QIANCCK G L+++ QDPAN+A+SFQ+ VG +G +N+TVRVP+NF+L APGPGYTC A IVKP++F++ D RR TQ +MTWNV CTYSQFLAQK P+CCVSLSSF N+ V+CPTC+CGC+N + +G CV + + L S + G PLLQCTSHMCPV+I+WH+ L KE++RVKIT+TN Sbjct: 27 AYDSLDPNGNITIKWDVMQWTPDGYAAVVTLSNYQQFRHIQPPGWQLGWTWQQKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNL 314
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 289.271 bits (739), Expect = 1.484e-91 Identity = 143/288 (49.65%), Postives = 186/288 (64.58%), Query Frame = 2 Query: 281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKY--KGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 + YD LDP G I IKWD++ +P + VT+ N Q+YRH++ PGW L W W +EVIW M G++TTEQG+CS + GN+PHCC + PT+VDLLPG N Q+ANCC+GGVL S QD AN S+F ++VG++ + +P NF + PGY+C A V PTKF T RR TQA+ TW C YSQF + +P CCVSLS+FY IV CPTC+CGC ++ E +L P+++C+ HMCP+RIHWHVK+NY+EYWRVKIT TNF Sbjct: 34 DGYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGV--PGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSSSHCVKD---GELPPYLEQK-HDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNF 315
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 282.337 bits (721), Expect = 5.082e-89 Identity = 140/295 (47.46%), Postives = 188/295 (63.73%), Query Frame = 2 Query: 281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNV-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTT-----NKTVRVPRNFTLKAPGPGYTCGPAKIVKPT---KFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138 +AYD +DP GNI I WD S + Y +V+++N Q YRHI+ PGW L W WA E+IW M G++ TEQGDC + +G PHCC+K P +VDL PGTPYN Q+++CC+GGVL+S Q+ + ++FQ+ VG ++ +P F + PG Y+C A V T +F+ R +TW VTCTYSQF+ +PTCCVSLSSFYN+TIV CP C+CGC + T + C+SE A G P+ +CT HMCPVR+HWHVK++Y+EYWRVK+TITN+ Sbjct: 21 DAYDPVDPNGNIIINWDFQS-IENVYTVMVSVHNHQLYRHIEQPGWRLSWRWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRAR--APCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPT-APQCISEGEKPELPA--GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNY 307
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 1.060e-74 Identity = 109/181 (60.22%), Postives = 137/181 (75.69%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQ 850 GNIT+KWD+++WTPDGYVAVVT YN+Q+ R I PGW + W KKEVIW+M+G++TT QG CS +KGN+P C + PTVVDLLPGTP+NQQIANCCK GVL + S+FQ+SVG+AG + KT R+P NF AP Y CGP+K V+PT+F TADKRRIT A+MTWN+TC + + Sbjct: 30 GNITVKWDLLNWTPDGYVAVVTAYNYQKQRSI--PGWKMSWRGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLK------PGSESAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVFHK 202
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 2.675e-28 Identity = 90/312 (28.85%), Postives = 139/312 (44.55%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGS--QTTEQGDC------SKYK----GNVPHCCKKDPTVVDLLPGTPYNQQ----IANCCKGGVLNSWVQDPANAASSFQVSV--GAAGTTNKTVRVPRNFTLKAP-GPGYTCGPAKIVKPTKFITADKRRITQ-AMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVL----------------GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITN 1135 G++TI +DV+ Y+A VTM N + W L + W + E I++M G+ + DC Y+ NV C ++ PTV+DL P T YN I CC+ G + DP+ ++S FQ+ V + P+N+ + P Y CGP V P++F+ + A +W V C +Q +P CCVS S+++N++IV C TCACGC +N + S L L K P + C + C V I+WH+ +Y+ W ++T+ N Sbjct: 217 GDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLD--NWKLSFDWMRDEFIYTMKGAYPSIVDSSDCVDGPQAKHYQDLDFSNVLSCARR-PTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFN 522
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.887e-25 Identity = 90/313 (28.75%), Postives = 141/313 (45.05%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSK---------YKG----NVPHCCKKDPTVVDLLPGTPYNQQIAN---CCKGGVLNSWVQDPANAASSF--QVSVGAAGTTNKTVRVPRNFTLKAP-GPGYTCGPAKIVKPTKFITADKRRITQA-MMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHL--ASAVLGKSTN---------------APPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITN 1135 G++TI +DVI Y+ VTM N + W L + W + E I M G+ T D +K Y G +V C++ P ++DL P + + N CC+ G + + DP+ + S F QV+ + P+N+ +K P Y+CGP V PT + ++ +W + C +Q + P CCVS S+F+N++I+ C TCACGC + + +C +E S L A+L N P + C + C V I+WH+ +Y+ W V+ITI N Sbjct: 216 GDLTIMYDVIRAYDQNYLTEVTMENHNPLGRLDH--WELSFDWMRDEFIQKMQGAYPTVV-DATKCIFGPQSLIYTGLDFADV-LTCERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQ-AKTEIPKCCVSFSAFFNDSIIPCNTCACGCVSETRR--TCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDN-CGVSINWHMASDYRGGWTVRITIFN 520
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.656e-25 Identity = 90/310 (29.03%), Postives = 139/310 (44.84%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQ-------GDCSKYKGNVPHC----CKKDPTVVDLLPGTPYNQ---QIANCCKGGVLNSWVQDPANAASSFQVSV-GAAGTTNKTVRVPRNFTLKAPG---PGYTCGPAKIVKPTKFIT-ADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTN---------------APPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITN 1135 G++ I +DV+ Y+A VT+ N + W L + W + E I +M G+ T ++ +Y ++ C++ P + DL P + ++ CCK G L + DP+ + S FQ+ V N+T P K G P Y CGP V P++F + +T A+ +W V C ++ AQ + CCVS S+FYNN+ V C TCACGC + T++ + S A+L N P L C + C V I+WHV +YK W ++T+ N Sbjct: 229 GDLNIVYDVLQSFDSNYLAQVTIDNDNPLGRLDR--WNLTFEWMRGEFINTMRGAYTHKKDPSECLYSKAGQYYKDLDFSQVMNCQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQH-WKIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFN 533
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.458e-23 Identity = 84/312 (26.92%), Postives = 140/312 (44.87%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGS--QTTEQGDC-----SKYKGNVPHC----CKKDPTVVDLLPGTPYNQ----QIANCCKGGVLNSWVQDPANAASSFQVSV--GAAGTTNKTVRVPRNFTLKAP-GPGYTCGPAKIVKPTKF-ITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVS----------------ERSSHLASA-VLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITN 1135 G++TI +DV Y A VT+ N + W L + W K E ++S G+ + DC +KY ++ C + P ++DL P T YN +I CC+ G + DP + S FQ+ V ++ P+++ +K P Y CGP V ++F T+ A +W V C +Q P CCVS SS++N++++ C TCACG ++ + +C + + + L +A + K+ P L C + C V I+WH+ +Y+ W ++T+ N Sbjct: 210 GDLTIMYDVTRAYQSSYSAQVTIENHNLLGRLD--NWDLSFMWMKDEFLFSTKGAYPSVVDSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFN 514
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 7.887e-23 Identity = 84/310 (27.10%), Postives = 138/310 (44.52%), Query Frame = 2 Query: 308 GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQG-------DCSKYKGNVPHC----CKKDPTVVDLLPGTPYNQQIAN----CCKGGVLNSWVQDPANAASSFQVSV-GAAGTTNKTVRVP-RNFTLKA-PGPGYTCGPAKIVKPTKFIT-ADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSER-------------SSHLASAVLGKSTNA--PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITN 1135 G++ I +DV+ Y+A VT+ N + W L W W + E I SM G+ E+ ++ G++ C+K P + DL P + + CCK G L DP+ + + FQ+ V N+T P RN+ + P Y CGP V T F + + T A+ +W V C ++ Q CCVS S+FYN++ + C TCACGC++ T++ + + + + L + V K + P L C + C + ++WH+ +Y W ++T+ N Sbjct: 219 GDLNIIYDVLQAYASSYMAQVTIDNTSPLGRLDH--WNLTWEWMRGEFIHSMRGAYAAEKNTLECLSSKAGQFYGDLDFSQVANCQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDTCNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFN 523 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 19
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0006478 ID=g.arboreum_cottongen_reftransV1_0006478; Name=g.arboreum_cottongen_reftransV1_0006478; organism=Gossypium arboreum; type=contig; length=1140bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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