g.arboreum_cottongen_reftransV1_0006478, g.arboreum_cottongen_reftransV1_0006478 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0006478
Unique Name	g.arboreum_cottongen_reftransV1_0006478
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1140

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr1	chromosome	g.arboreum_cottongen_reftransV1_0006478:1..1140 . Chr1:70117294..70120339 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: D7MUF6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496244 PE=4 SV=1)

HSP 1 Score: 535.413 bits (1378), Expect = 0.000e+0
Identity = 258/323 (79.88%), Postives = 286/323 (88.54%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  +SKL  +   ++FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPA AASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIV+PTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K T  PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:    1 MESFFSRSTSIVSKLSFWALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLLGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNKTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 323

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: S8E6V3_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_03176 PE=4 SV=1)

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 249/289 (86.16%), Postives = 267/289 (92.39%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA---PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDP GNITIKWDVISWTPDGYVAVVT++NFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCS++KGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVG AGTTNKTV++P+NFTLKAPGPGYTCGPAK VKPTKF+T D RR+TQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIV CPTC CGC+NN T+ GSCV + + HLAS V G   N    PPL+QCTSHMCPVR+HWHVKLNYK YWRVK+TITNF
Sbjct:   16 EAYDALDPNGNITIKWDVISWTPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGGAGTTNKTVKLPKNFTLKAPGPGYTCGPAKNVKPTKFVTQDGRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVPCPTCTCGCKNNLTQPGSCVDQFTPHLASVVSGSGKNGAYLPPLVQCTSHMCPVRVHWHVKLNYKAYWRVKVTITNF 304

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A067K8N5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11749 PE=4 SV=1)

HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0
Identity = 265/322 (82.30%), Postives = 290/322 (90.06%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGS--CVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS  + S++KL SFT  L+FL SC TFT  EAYDALDP GNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSM+G QTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSW QDPA A SSFQVSVGAAGT+NKTVR+P+NFTLKAPGPGYTCGPAKIV+PTKFI++DKRR TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN TIV+CPTCACGCQN++T +G+  CV+  S HLAS V     +  PL+QCTSHMCP+R+HWHVKLNYKEYWRVK+T+TNF
Sbjct:    1 MESHFSLLTGSVTKLSSFTIFLVFLLSCCTFTPIEAYDALDPNGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMVGGQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWAQDPATAVSSFQVSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRPTKFISSDKRRSTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNSTTGAGAGTCVNPDSPHLASVVSPTKNDNTPLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTVTNF 322

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A9P983_POPTR (Phytochelatin synthetase family protein OS=Populus trichocarpa GN=POPTR_0015s07100g PE=2 SV=1)

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 266/323 (82.35%), Postives = 293/323 (90.71%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNS-TESGSCVSERSSHLASAVL--GKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME   S  + S++K+ +FT LLLFL SCST TSTEAYDALDP GNITIKWDVI WTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIW+MMG+QTTEQGDCSK+KGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSW QDPANA SSFQ+SVGAAGTTNKTVRVP+N TLKAPGPGYTCGPAKIV+PTKFI+ADKRRITQA+MTWN+TCTYSQFLAQKTPTCCVSLSSFYN+TIV+CPTCACGCQN +   SG+CV   + HLAS +   GKS N  PL+QCTSHMCP+R+HWHVKLNYKEYWRVK+T+TNF
Sbjct:    1 MEPSSSLVTVSVTKISAFTILLLFLISCSTLTSTEAYDALDPNGNITIKWDVIQWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMMGAQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPANAVSSFQISVGAAGTTNKTVRVPKNITLKAPGPGYTCGPAKIVRPTKFISADKRRITQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPTCACGCQNTTGAGSGTCVHPDTPHLASVISPPGKSDNT-PLVQCTSHMCPIRVHWHVKLNYKEYWRVKVTVTNF 322

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A059AF09_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01392 PE=4 SV=1)

HSP 1 Score: 530.791 bits (1366), Expect = 0.000e+0
Identity = 256/320 (80.00%), Postives = 289/320 (90.31%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            M   FS ASRS+S L + + LL+ L SC+ F STE+YD LDP GNITI+WDV+SWTPDGYVAVVT++NFQQYRHIQAPGW+LGWTWAKKEVIW+M+G Q TEQGDCS+YKGNVPHCCKK+PTVVDLLPGTPYNQQIANCCKGGV++SW+QDPANAAS+FQ+SVGA+GTTNKTVR+P+NFTLKAPGPGYTCGPAKIVKPTKF TADKRR TQA MTWNVTC YSQFLAQKTPTCCVSLSSFYN+T+V+CPTCACGCQNN+T+ GSCV   S +LAS V    TN+ PL+QCTSHMCP+R+HWHVKLNYKEYWRVKITITNF
Sbjct:   28 MGFCFSPASRSVSMLSNTSVLLVLLLSCTFFASTESYDPLDPNGNITIRWDVMSWTPDGYVAVVTIFNFQQYRHIQAPGWSLGWTWAKKEVIWTMLGGQATEQGDCSRYKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVISSWLQDPANAASAFQLSVGASGTTNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTKFPTADKRRFTQAQMTWNVTCAYSQFLAQKTPTCCVSLSSFYNDTVVSCPTCACGCQNNATQPGSCVEPNSPYLASVVSNAGTNS-PLVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 346

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: M0SK61_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 0.000e+0
Identity = 247/287 (86.06%), Postives = 267/287 (93.03%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD+LDP GNITIKWD++ WTPDGYVAVVTM+NFQQYRHIQAPGWTLGWTWAKKEVIWSM+G+QTTEQGDCS++KGN PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPANAASSFQVSVGAAGTTNKTVRVP+NFTL+APGPGYTCG AKIVKPTKF+T D RR TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIVNCPTC CGCQNN+T+ GSCV   S +LASAV G   N+  PL+QCTSHMCPVR+HWHVKLNYKEYWRVKI ITNF
Sbjct:   38 EAYDSLDPNGNITIKWDIMQWTPDGYVAVVTMFNFQQYRHIQAPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSRFKGNTPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWVQDPANAASSFQVSVGAAGTTNKTVRVPKNFTLRAPGPGYTCGIAKIVKPTKFVTQDGRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVNCPTCTCGCQNNATQPGSCVEGDSPYLASAVNGPGKNSFTPLVQCTSHMCPVRVHWHVKLNYKEYWRVKIAITNF 324

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: A0A087GDB7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G439700 PE=4 SV=1)

HSP 1 Score: 530.02 bits (1364), Expect = 0.000e+0
Identity = 254/323 (78.64%), Postives = 280/323 (86.69%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  ++K       ++FL S S FTS EAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCC+GGV+NSWVQDPA AASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIVKPTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K    PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:    1 MESFFSRSTSLVAKSSFLAVCIVFLISSSFFTSAEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQTPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCRGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVKPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNKTESGACLDPDTPHLASVVSPPTKKGVILPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 323

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: V4T1I5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020097mg PE=4 SV=1)

HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0
Identity = 242/286 (84.62%), Postives = 264/286 (92.31%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDP GNITIKWD+++W PDGYVAVVT++NFQQYRHIQAPGWTLGWTWAKKEVIWSMMG  TTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV++SW QDP  A SSFQ+SVGAAGTTNKTVRVP+NFTLKAPGPGYTCGPAK+ KPTKFIT+DKRR+TQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYN TIV+CPTCACGCQNN TESGSC++ ++ HLAS V        P++QCTSHMCP+R+HWHVKLNYKEYWRVKITITNF
Sbjct:   36 EAYDALDPNGNITIKWDIMTWNPDGYVAVVTIFNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGGLTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNF 321

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BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: B9SYD1_RICCO (Protein COBRA, putative OS=Ricinus communis GN=RCOM_0917640 PE=4 SV=1)

HSP 1 Score: 528.865 bits (1361), Expect = 0.000e+0
Identity = 243/287 (84.67%), Postives = 267/287 (93.03%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAP-PLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDPTGNITIKWD+I+WTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIW+M+G QTTEQGDCSK+KGN+PHCCKK+PTVVDLLPGTPYNQQIANCCKGGV++SW QDP+ A S+FQ+SVGAAGTTNKTVRVP+NFTLKAPGPGYTCGPAKIV+P++F T DKRR+TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIV CPTCACGCQ+NS+ SG CV   + HLAS V G   N+P PL+QCT HMCPVRIHWHVKLNY+EYWRVKITITNF
Sbjct:   32 EAYDALDPTGNITIKWDIINWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWNMVGGQTTEQGDCSKFKGNIPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVISSWGQDPSKAVSAFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVRPSRFFTTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVPCPTCACGCQSNSSLSGGCVDPDAPHLASVVSGSGKNSPAPLVQCTRHMCPVRIHWHVKLNYREYWRVKITITNF 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Match: M0ZLR0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001371 PE=4 SV=1)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 244/287 (85.02%), Postives = 262/287 (91.29%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKS-TNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            +A+D LDP GNITIKWDVISW PDGYVAVVTMYNFQQYRHIQAPGW+LGWTWAKKEVIW+MMG QTTEQGDCSKYKGN+PHCCKKDPTVVD+LPGTPYNQQIANCCKGGV+NSW QDPANA SSFQ+SVGAAGTTNKTVRVP+NFTLKAPGPGYTCGPAKIVKPTKF++AD RR+TQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIV CPTC CGCQ+N T+ GSCV   + HLAS V      N  PL+QCT HMCP+RIHWHVKLNYKEYWRVKITITNF
Sbjct:   26 DAFDPLDPNGNITIKWDVISWAPDGYVAVVTMYNFQQYRHIQAPGWSLGWTWAKKEVIWTMMGGQTTEQGDCSKYKGNIPHCCKKDPTVVDMLPGTPYNQQIANCCKGGVINSWGQDPANAVSSFQISVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTKFVSADGRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCTCGCQSNGTQRGSCVDPETPHLASVVSDHGKNNYVPLVQCTKHMCPIRIHWHVKLNYKEYWRVKITITNF 312

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1)

HSP 1 Score: 536.184 bits (1380), Expect = 0.000e+0
Identity = 258/323 (79.88%), Postives = 285/323 (88.24%), Query Frame = 2

Query:  179 METVFSAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV---LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            ME+ FS ++  +SKL      ++FL S S+FTSTEAYDALDP GNIT+KWDV+SWTPDGYVAVVTM+NFQ+YRHIQ+PGWTLGW WAKKEVIWSM+G+QTTEQGDCSKYKGN+PHCCKKDPTVVDLLPGTPYNQQIANCCKGGV+NSWVQDPA AASSFQ+SVGAAGTTNKTVRVPRNFTL  PGPGYTCGPAKIV+PTKF+T D RR TQAMMTWN+TCTYSQFLAQ+TPTCCVSLSSFYN TIV CPTCACGCQNN TESG+C+   + HLAS V     K T  PPL+QCT HMCP+R+HWHVK NYKEYWRVKITITNF
Sbjct:    1 MESFFSRSTSIVSKLSFLALWIVFLISSSSFTSTEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIWSMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPATAASSFQISVGAAGTTNKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNF 323

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 8.680e-177
Identity = 241/316 (76.27%), Postives = 271/316 (85.76%), Query Frame = 2

Query:  194 SAASRSISKLIXXXXXXXXXXXXXXXXXXEAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKST-NAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            + +SRS++       LL      S   +TEAYDALDP GNITIKWDV+SWTPDGYVAVVTM+N+QQ+RHIQAPGW LGWTWAKKEVIWSM+G+QTTEQGDCSK+KG  PHCCKKDPTVVDLLPGTPYN QIANCCK GV+N++ QDP+NAASSFQ+SVG AGTTNKTV++P+NFTLKAPGPGYTCG A IV+PTKF T D RR TQA+MTWNVTCTYSQFLAQKTP+CCVSLSSFYN+TIVNCPTC+CGCQNN T  GSCV+E S +L SA+ G       PL+QCTSHMCP+RIHWHVKLNYKEYWRVKITITNF
Sbjct:    6 AGSSRSVAPCCCCAVLLAAALLFSAPATTEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMFNYQQFRHIQAPGWQLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGGTPHCCKKDPTVVDLLPGTPYNMQIANCCKAGVINTFNQDPSNAASSFQISVGLAGTTNKTVKLPKNFTLKAPGPGYTCGRAMIVRPTKFFTGDGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNF 321

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1)

HSP 1 Score: 491.115 bits (1263), Expect = 1.898e-170
Identity = 224/288 (77.78%), Postives = 256/288 (88.89%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAV--LGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP+GNIT+KWD+I+WT DGYVA VT+YNFQQYRHIQAPGWTLGW+WAK+EVIW M G QTTEQGDCSK+KG +PHCCKK P+VVDLLPG+PYNQQIANCC+GGVLNSW QDPA A S+FQ++VG AGTTNKTVRVP+NFTLKAPGPGYTC PAKIVKPT+FI  DKRR+TQA+MTWNVTCTYSQFLAQKTPTCCVSLSSFYN TIV+CPTC+CGC+N S + G+CV  +   +AS +   GK+   PPL+QCT HMCPVRIHWHVK+NYK+YWRVK+TITNF
Sbjct:   32 EAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVIWGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDPATAVSAFQLTVGQAGTTNKTVRVPKNFTLKAPGPGYTCSPAKIVKPTRFIGTDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTS-QPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNF 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 8.507e-169
Identity = 222/287 (77.35%), Postives = 252/287 (87.80%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP GNITIKWDV+ WTPDGYVAVV++YN+QQYRHIQ+PGW LGW WAKKE+IW+M G Q TEQGDCSK+K N+PHCCKKDP +VDLLPGTPYN QIANCCKGGVLNSW QDPANA +SFQVSVG AGTTNKTVRVPRNFTLK+PGPGYTCG AK+V+PTKF + D RR TQA MTWNVTCTYSQ +AQ++PTCCVSLSSFYN+TIVNCPTC+CGCQNN  + GSCV   S +LAS V   + ++  PL+QCTSHMCP+R+HWHVK+NYKEYWRVKIT+TNF
Sbjct:   27 EAYDPLDPNGNITIKWDVLQWTPDGYVAVVSLYNYQQYRHIQSPGWKLGWVWAKKEIIWAMNGGQATEQGDCSKFKSNIPHCCKKDPEIVDLLPGTPYNMQIANCCKGGVLNSWAQDPANAIASFQVSVGQAGTTNKTVRVPRNFTLKSPGPGYTCGSAKVVRPTKFFSQDGRRTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNN--KPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNF 311

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2)

HSP 1 Score: 474.552 bits (1220), Expect = 4.668e-164
Identity = 214/286 (74.83%), Postives = 254/286 (88.81%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYDALDP GNITIKWD++SWT DGYVAVVT++NFQQYRHI+APGW LGW+W KKEVIWSM+G Q TEQGDCSK+KGN+PHCCKK P +VDLLPGTPYNQQI+NCC+GGV+++W QDPA A SSFQ+SVG +GTTN TVR PRN TLKAPGPGYTCGPAK+VKP++FI+ADKRR TQ+++TWN+TCTYSQFLA+KTPTCCVSLS+FYN TIV CPTC+CGCQ NS+++G+CV  + + +  A LGK+ N  PLLQCT HMCP+R+HWHVK +YKEYWRVK+ ITNF
Sbjct:   27 EAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWSMVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPATAISSFQISVGQSGTTNTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQ-NSSQAGTCVDPKIASVVPA-LGKN-NLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNF 309

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1)

HSP 1 Score: 454.136 bits (1167), Expect = 6.853e-156
Identity = 208/288 (72.22%), Postives = 241/288 (83.68%), Query Frame = 2

Query:  281 EAYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVK-PTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            EAYD LDP GNITIKWD+  WTPDGYVAVVT+YNFQ+YRHIQAPGW+LGW WAKKE+IWSM G Q TEQGDCS +K N+PHCCK+DP VVDL+PG PYN Q  NCCKGGVL SWVQDP NA +SFQ++VG +GT+NKTV+ P+NFTLKAPGPGY+CG A+ VK PT+FI+ D RR TQA +TWNVTCTYSQF+AQ+ PTCCVSLSSFYN TIVNCP CACGCQN   + GSCV   S +LAS V G    +  PL+QCT HMCP+R+HWHVKLNY++YWRVK+TITN+
Sbjct:   28 EAYDPLDPNGNITIKWDITQWTPDGYVAVVTIYNFQKYRHIQAPGWSLGWAWAKKEIIWSMAGGQATEQGDCSAFKANIPHCCKRDPRVVDLVPGAPYNMQFGNCCKGGVLTSWVQDPLNAVASFQITVGHSGTSNKTVKAPKNFTLKAPGPGYSCGLAQEVKPPTRFISLDGRRTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGCQNK--KPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNW 313

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2)

HSP 1 Score: 448.743 bits (1153), Expect = 4.219e-154
Identity = 213/287 (74.22%), Postives = 235/287 (81.88%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLG--KSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP+GNITIKWD++SWT DGYVA VTM NFQ YRHIQ PGWTLGWTWAKKEVIWSM+G+QTTEQGDCSK+KGNVPHCCKK PTVVDLLPG PYNQQ +NCCKGGV+ +W QDP+ A S FQVS G AGTTNKTV++P+NFTL  PGPGYTCGPAKIV  T F+T DKRR TQA+MTWNVTCTYSQFLA+K P+CCVS SSFYN+TI  CP+CACGC+N      SCV   S  L    L   K  N  PLLQCT HMCPVR+HWHVK NYK+YWRVKI ITNF
Sbjct:   20 AYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAAVSQFQVSAGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKK----SCVKADSKILTKKGLNTPKKDNT-PLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNF 301

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 3.909e-141
Identity = 197/302 (65.23%), Postives = 232/302 (76.82%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNNSTESGSCVSERSSHLASAVLGKSTNA-----------------PPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDV+SWTPDGYVA+VT+ N+Q YR I APGWT+GWTWA++EVIWSM+G+Q T+QGDCS++K N+PHCC++ P VVDLLPG PYNQQIANCC+GGVL ++ Q P+ AA++FQVSVG AGTTN+TVR+PRNFTL  PGPGYTCG A++V  T F+TAD+RR TQA+MTWNVTCTYSQ LA K P+CCVS SSFYN+TIV C  CACGC  +      CV         AV GK  +A                  PLLQCT+HMCPVR+HWHVKLNY+EYWR KITI NF
Sbjct:   21 AYDPLDPNGNITIKWDVMSWTPDGYVAMVTINNYQTYRQIMAPGWTVGWTWARQEVIWSMVGAQATDQGDCSRFKANLPHCCRRTPAVVDLLPGVPYNQQIANCCRGGVLPAYGQAPSAAAAAFQVSVGQAGTTNRTVRLPRNFTLLGPGPGYTCGRARVVPSTVFLTADRRRKTQALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHK----PCVRSERDGKRLAVTGKKHDANANAHGRGNGVAAAAMAAPLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNF 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 5.312e-139
Identity = 196/314 (62.42%), Postives = 232/314 (73.89%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNN----------STESG------------------SCVSERSSH-LASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDVISWTPDGYVA+VTM N+Q YR I APGWT+GW+WAKKEVIWS++G+Q TEQGDCSK+KG +PH CK+ P +VDLLPG PYNQQIANCCK GV++++ QDPA + S+FQVSVG AGTTNKTV++P NFTL  PGPGYTCGPA IV  T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSFYN+TIV C  CACGC ++          +  +G                   C+   S   L++ V     +  PLLQCTSHMCP+R+HWHVKLNYK+YWR KI ITNF
Sbjct:   22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNF 335

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1)

HSP 1 Score: 411.379 bits (1056), Expect = 5.312e-139
Identity = 196/314 (62.42%), Postives = 232/314 (73.89%), Query Frame = 2

Query:  284 AYDALDPTGNITIKWDVISWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMMGSQTTEQGDCSKYKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPANAASSFQVSVGAAGTTNKTVRVPRNFTLKAPGPGYTCGPAKIVKPTKFITADKRRITQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCACGCQNN----------STESG------------------SCVSERSSH-LASAVLGKSTNAPPLLQCTSHMCPVRIHWHVKLNYKEYWRVKITITNF 1138
            AYD LDP GNITIKWDVISWTPDGYVA+VTM N+Q YR I APGWT+GW+WAKKEVIWS++G+Q TEQGDCSK+KG +PH CK+ P +VDLLPG PYNQQIANCCK GV++++ QDPA + S+FQVSVG AGTTNKTV++P NFTL  PGPGYTCGPA IV  T ++T D+RR TQA+MTW VTCTYSQ LA + PTCCVS SSFYN+TIV C  CACGC ++          +  +G                   C+   S   L++ V     +  PLLQCTSHMCP+R+HWHVKLNYK+YWR KI ITNF
Sbjct:   22 AYDPLDPKGNITIKWDVISWTPDGYVAMVTMSNYQMYRQILAPGWTVGWSWAKKEVIWSIVGAQATEQGDCSKFKGGIPHSCKRTPAIVDLLPGVPYNQQIANCCKAGVVSAYGQDPAGSVSAFQVSVGLAGTTNKTVKLPTNFTLAGPGPGYTCGPATIVPSTVYLTPDRRRRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNF 335

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
D7MUF6_ARALL	0.000e+0	79.88	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
S8E6V3_9LAMI	0.000e+0	86.16	Uncharacterized protein (Fragment) OS=Genlisea aur...	[more]
A0A067K8N5_JATCU	0.000e+0	82.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A9P983_POPTR	0.000e+0	82.35	Phytochelatin synthetase family protein OS=Populus...	[more]
A0A059AF09_EUCGR	0.000e+0	80.00	Uncharacterized protein OS=Eucalyptus grandis GN=E...	[more]
M0SK61_MUSAM	0.000e+0	86.06	Uncharacterized protein OS=Musa acuminata subsp. m...	[more]
A0A087GDB7_ARAAL	0.000e+0	78.64	Uncharacterized protein OS=Arabis alpina GN=AALP_A...	[more]
V4T1I5_9ROSI	0.000e+0	84.62	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
B9SYD1_RICCO	0.000e+0	84.67	Protein COBRA, putative OS=Ricinus communis GN=RCO...	[more]
M0ZLR0_SOLTU	0.000e+0	85.02	Uncharacterized protein OS=Solanum tuberosum GN=PG...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0006478 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 19


Match Name	E-value	Identity	Description
COBRA_ARATH	0.000e+0	79.88	Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 ...	[more]
COBL3_ORYSJ	8.680e-177	76.27	COBRA-like protein 3 OS=Oryza sativa subsp. japoni...	[more]
COBL1_ARATH	1.898e-170	77.78	COBRA-like protein 1 OS=Arabidopsis thaliana GN=CO...	[more]
COBL1_ORYSJ	8.507e-169	77.35	COBRA-like protein 1 OS=Oryza sativa subsp. japoni...	[more]
COBL2_ARATH	4.668e-164	74.83	COBRA-like protein 2 OS=Arabidopsis thaliana GN=CO...	[more]
COBL2_ORYSJ	6.853e-156	72.22	COBRA-like protein 2 OS=Oryza sativa subsp. japoni...	[more]
COBL4_ARATH	4.219e-154	74.22	COBRA-like protein 4 OS=Arabidopsis thaliana GN=CO...	[more]
COBL6_ORYSJ	3.909e-141	65.23	COBRA-like protein 6 OS=Oryza sativa subsp. japoni...	[more]
COBL5_ORYSJ	5.312e-139	62.42	COBRA-like protein 5 OS=Oryza sativa subsp. japoni...	[more]
COBL5_ORYSI	5.312e-139	62.42	COBRA-like protein 5 OS=Oryza sativa subsp. indica...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PIRSF	PIRSF038122	COBRA	coord: 8..320 e-value: 1.1E-175 score: 581.9
IPR006918	COBRA, plant	PFAM	PF04833	COBRA	coord: 60..223 e-value: 1.4E-73 score: 246.1
IPR006918	COBRA, plant	PRODOM	PD140986		coord: 35..222 e-value: 1.0E-101 score: 947.0
None	No IPR available	PANTHER	PTHR31673	FAMILY NOT NAMED	coord: 1..320
None	No IPR available	PANTHER	PTHR31673:SF3	COBRA-LIKE EXTRACELLULAR GLYCOSYL-PHOSPHATIDYL INOSITOL-ANCHORED FAMILY PROTEIN-RELATED	coord: 1..320
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 15..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..320
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 27..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..14
None	No IPR available	SIGNALP_GRAM_NEGATIVE	SignalP-noTM	SignalP-noTM	coord: 1..36 score: 0.665
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..36 score: 0.477
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..36 score: 0.771

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0006478 ID=g.arboreum_cottongen_reftransV1_0006478; Name=g.arboreum_cottongen_reftransV1_0006478; organism=Gossypium arboreum; type=contig; length=1140bp
GGAGCATGTACCTCTCTGTCTCAGACTCTGTACTAAAATGCTTTTATAAG
CTTCACTTGCAACTCAACAGCTGACCTCTATCTTCTCCATTTGATGCGAG
AAGGATCTTTCTTTCTTTATTCTGCACATCTTAACCTTAACCACATCATA
AGATAGAGATCTCTTAAACGATCGAGTTATGGAGACTGTCTTTTCTGCAG
CAAGTAGATCCATTTCCAAGCTCATTAGCTTCACCGCTTTGCTTCTTTTC
TTGTTTTCCTGCTCTACTTTCACTTCTACTGAAGCTTATGATGCGCTTGA
TCCAACTGGAAATATCACTATCAAATGGGACGTAATAAGTTGGACCCCAG
ATGGCTATGTTGCTGTTGTTACAATGTACAATTTCCAACAGTATCGCCAT
ATTCAGGCACCTGGTTGGACATTGGGGTGGACATGGGCCAAAAAGGAAGT
AATCTGGAGCATGATGGGAAGCCAAACCACGGAACAAGGGGATTGTTCAA
AATACAAAGGAAACGTCCCTCATTGCTGTAAAAAGGATCCCACAGTTGTG
GATTTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAA
AGGGGGGGTATTAAATTCATGGGTTCAAGACCCGGCCAATGCAGCAAGCT
CATTTCAGGTTAGTGTGGGCGCTGCAGGAACGACGAACAAAACTGTGAGA
GTGCCTAGAAACTTTACCCTGAAAGCACCAGGTCCAGGATATACTTGTGG
GCCTGCCAAGATTGTGAAACCCACTAAATTCATAACGGCTGATAAAAGGA
GAATAACTCAAGCTATGATGACATGGAATGTTACATGCACATATTCCCAA
TTCCTGGCTCAAAAGACTCCTACATGTTGCGTCTCGCTCTCTTCCTTCTA
TAATAACACTATCGTGAATTGCCCGACATGTGCTTGTGGCTGTCAGAATA
ACTCAACTGAATCTGGGAGTTGTGTAAGCGAAAGGTCTTCACATTTAGCT
TCAGCTGTTCTGGGCAAATCTACCAATGCACCACCTTTGCTTCAGTGTAC
GAGCCATATGTGTCCAGTTCGAATTCACTGGCATGTTAAGCTCAACTACA
AGGAATACTGGCGTGTGAAGATCACGATCACCAATTTCAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR006918	COBRA_pln

Vocabulary: **Cellular Component**
Term	Definition
GO:0031225	obsolete anchored component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0010215	cellulose microfibril organization
GO:0016049	cell growth

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g.arboreum_cottongen_reftransV1_0006478, g.arboreum_cottongen_reftransV1_0006478 (contig) Gossypium arboreum

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