g.arboreum_cottongen_reftransV1_0018389, g.arboreum_cottongen_reftransV1_0018389 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A5APZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030235 PE=4 SV=1) HSP 1 Score: 454.907 bits (1169), Expect = 3.978e-153 Identity = 242/396 (61.11%), Postives = 297/396 (75.00%), Query Frame = -1 Query: 4 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVS-------EGKK-----REKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEV 1155 ME++S NP VL +LEAL+QA LQ +PT S SNSS IKALLELETES+S++S DP LS LSRHL+ LK LV TL+++RG+ L SFLTRR ST SISRVAGSIESEI+A +DR ++ L AL++ D+DEL +LL+QFE+RVSQGF+ ELQD +LKSK FS+L++VLC+PNCSK+IRE + F V+ALIRFNKDVFVG V MG T+ AL+ M S S+ VL LI IKSP VD I NGE+PKI++ S+DL +++ +C EIGY+GRKEA+EAML G+IEKL+ELQRSE GG LI MG + E + EG + REK+FLE HPFASCVARFAVQLEVGEGLR+REKR FK EIL VREA +DAEAA I+AE+ Sbjct: 1 MEEAS-DHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSLLSSDPHLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWIDRERVEDLTRALREL-ADDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCNPNCSKKIREHSGFAVSALIRFNKDVFVGXVLMGRTVLALIAMGSRSSLTVLWSLIKSIKSPLVDEIESNGEIPKIISFFSSQDLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLLELQRSEMGGILIEMGWFNEEENMKSFDGVDIEGIRRSRDSREKRFLETHPFASCVARFAVQLEVGEGLRQREKRXFKQEILGLVREACASDAEAAXIVAEL 394
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A059CMI1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00582 PE=4 SV=1) HSP 1 Score: 446.817 bits (1148), Expect = 1.901e-151 Identity = 234/385 (60.78%), Postives = 291/385 (75.58%), Query Frame = -1 Query: 1 PGVLKLLEALKQAIQELQAHPTHKSV---QSNSSP-IKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW-KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY-----GNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1125 P VL +LEALK+A +L + P + S SP +KALLELETESDS++S+DP LS LS HL+ L+ LV ++RG+GL SFL RR S +SISRVA SIESEIQA +DR +++ L+ L+ DE+EL +LLSQ E RV +GF ELQD +L+S+ F +L+T LC+ NCSK+IRE F +AALIRFNKDVFVGQV MG TI+AL+ M SAHS++VLC LI IKSP VD I NG++PKI+ L +DL +KVV +CILEIGYFGRKEA+EAM+ GL++KLVELQRSE GGDLI +G++ E+ + GK + ++FLE+HPFASCVARFAVQLEVGEGLR REKRAFK EIL +VREAS NDAEAATI+AEVL Sbjct: 10 PDVLSVLEALKKASHDLHSDPKSTAAAPPDSGCSPAVKALLELETESDSLLSRDPNLSALSAHLSTLRSLVSAQPKSRGHGLGSFLARRASAHSISRVAESIESEIQAWIDRETVEKLVAGLRGKGCGDEEELVQLLSQLEARVLRGFERELQDLLLRSRLFGLLETALCNQNCSKRIREHIGFAIAALIRFNKDVFVGQVPMGATIRALITMASAHSLRVLCSLIKSIKSPLVDEIESNGQIPKIINFLSHEDLQVKVVAMDCILEIGYFGRKEAIEAMIEEGLVKKLVELQRSELGGDLIDLGRFEESEIETESVTNAGKSKTRRFLESHPFASCVARFAVQLEVGEGLRGREKRAFKLEILARVREASANDAEAATIVAEVL 394
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: W9R389_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024912 PE=4 SV=1) HSP 1 Score: 446.432 bits (1147), Expect = 5.304e-151 Identity = 253/404 (62.62%), Postives = 308/404 (76.24%), Query Frame = -1 Query: 1 DSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGY-GLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGK------------YGNENEVSEG--------KKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1149 D PK + P VLK+LEALKQA ++LQAHP+ S SNSS IKALLELETESD+I+SKDP LSTLS+ LA LK VETL+++R + G+ SF+ RRVSTYSISRVA SI +EIQA +DR S+++L AL++ ++EDEL LL+QFE RVS+GFN ELQD VLKSK F+ L++VLCD SK+IRE+ A + ALIRFNKDVFVGQV MG TI+AL+ M S S+KVLC LI IKSP VD I NGELP+I+ LL ++ L M+V+ F C+LEIGYFGRKEA++AM+ GLI+ LVELQRSE GGDLIG+ + EVS G + RE++FLE+HPFASCVARFAVQLEVGEGLR+REKRAFK +IL VREASV+DAEAATI+AEVL Sbjct: 2 DDFPKRETPRVLKVLEALKQASRDLQAHPSPDSDDSNSSAIKALLELETESDTILSKDPNLSTLSQLLARLKTHVETLQKSRAHHGISSFVARRVSTYSISRVAVSIGTEIQAWIDRESVENLARALRER-ENEDELVGLLTQFEDRVSEGFNRELQDLVLKSKIFASLESVLCDTGSSKRIRERCALAIGALIRFNKDVFVGQVLMGPTIKALITMSSTCSMKVLCGLIRSIKSPLVDEIESNGELPRIINLLNNQYLQMRVLAFECVLEIGYFGRKEAIDAMMEEGLIKILVELQRSELGGDLIGLERCEGESESESENEGEKSREVSVGGVVLERRRESRERRFLESHPFASCVARFAVQLEVGEGLRQREKRAFKQQILVGVREASVSDAEAATILAEVL 404
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: V7CDV1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G170800g PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 3.828e-135 Identity = 224/385 (58.18%), Postives = 278/385 (72.21%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 ME+S E PG+L++LEALK+A +Q H T S+S +KALLEL+T + S DP L LS +L LK LV +L N GLRSFLTR +ST+ +SR+A SIESEIQA +DR ++ +L +L++P D+L LL+QF R+SQGFN +LQD VLK K FS L+TVL D C+ + RE+A VAALIRFNKDVFVGQV MG T++AL+ M S +SV+VLC LI I+SP VD I NGE+PK++ LL S+DL ++++ C+LEIGYFGRKEAV+AM+ GL+EKLVELQRSE G DLI + GK R LE HPFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VREAS++DAEAATI AEVL Sbjct: 1 MEES---EKAPGMLQVLEALKEATHHIQQHHT-----SDSPAVKALLELQT---ILSSSDPKLCALSDYLNRLKTLVHSL--NHSKGLRSFLTRPLSTHCLSRLAVSIESEIQAWIDRETLFTLSASLRNPDDAIDQLMALLTQFRDRISQGFNRDLQDLVLKLKLFSSLETVLLDEKCADRAREQAGLAVAALIRFNKDVFVGQVMMGPTVRALVAMGSMYSVEVLCSLIRSIRSPLVDEIESNGEIPKVMALLSSRDLQLQLLALECVLEIGYFGRKEAVDAMVKEGLVEKLVELQRSETGDDLIEI-----------GKGRVCGVLERHPFASCVARFAVQLEVGEGLRQREKRAFKPEILVRVREASLSDAEAATIAAEVL 361
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: F6H332_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06510 PE=4 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 1.561e-121 Identity = 199/385 (51.69%), Postives = 274/385 (71.17%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 M ++S K N V +LEA+K+A ++LQ +P + + S IK+LLEL+ E +SI+S DP L LS+ L LK L++ LE ++GYG RSF+ R+++ Y SRVA SI EI+A +D S+ +L+ +++ DEDE +L +FE RVSQGF+ +LQD +L++K F++++++LCD CS IRE++A + +L+RFNKDVFVG V MG TI+ L+ + S S++VL LI IKSP +D+I NGE+PKI++LL S DLS++V +CILEIGYFGRKEA+EAM GLIEKL+ELQRSE GD I E E G E + F+SCVARFAVQLEVGEGLR+REKR FK E+L++V+E+SV++AEAATI+AEVL Sbjct: 1 MGEASNKH-NQHVFTVLEAIKKASKDLQTNPISFT-NTYQSTIKSLLELKNEENSILSTDPSLLKLSQLLNSLKALLDKLENSQGYGFRSFVRRQLTYYEASRVASSIRDEIKAWVDHESLKNLVRTIEES-GDEDEKIEVLKEFESRVSQGFDRDLQDLILRTKIFTIVESILCDSQCSVSIREESAAVIVSLVRFNKDVFVGLVLMGPTIRVLISISSCRSIQVLTSLIKLIKSPLIDIIESNGEIPKIISLLSSPDLSIQVAAMDCILEIGYFGRKEAIEAMFGDGLIEKLMELQRSENEGDSI------TETENGGGGCEEPEMGLKRRFSSCVARFAVQLEVGEGLRQREKREFKLEVLKRVKESSVSEAEAATIVAEVL 376
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: Q402G4_SOYBN (Putative uncharacterized protein GmTDF-5 OS=Glycine max GN=GmTDF-5 PE=2 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 3.248e-121 Identity = 205/366 (56.01%), Postives = 260/366 (71.04%), Query Frame = -1 Query: 37 EDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVN 1134 E +P ++++LEALK+A ++Q H + S+S IKALLEL + + S DP LS LS HL LK LV +L N GL SFLTR +ST S+SR+A IESEIQ+ +DR ++ +L ++L++P + E LL+Q +RVSQGFN ELQD VLK K FS L++VL D CS +RE+A V+ALIRFNKDVFVGQV MG T++AL+ M S S++VLC LI I+SP VD I NGE+P I+ +L S+DL ++VV C LEIGYFGRKEAVEAM+ GL+EKLVELQRSE GGDLI + G+++ LE PFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VR+ASV+ Sbjct: 7 EKSPQLVRVLEALKEATHDIQRHHS-----SDSPAIKALLELHS---ILSSSDPYLSALSDHLIRLKTLVHSL--NHSNGLLSFLTRPLSTLSLSRLASQIESEIQSWIDRETLHTLSSSLRNP-NNNHEFVSLLTQSIYRVSQGFNRELQDLVLKLKLFSSLESVLFDDKCSIPVREQAGLAVSALIRFNKDVFVGQVLMGPTVRALVSMGSVLSLEVLCSLIRSIRSPLVDEIESNGEIPNIIAMLNSEDLELRVVALGCALEIGYFGRKEAVEAMMKEGLVEKLVELQRSEKGGDLIEI-----------GREKVSGVLERKPFASCVARFAVQLEVGEGLRQREKRAFKPEILIRVRDASVS 350
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A0B2Q128_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011658 PE=4 SV=1) HSP 1 Score: 367.081 bits (941), Expect = 1.179e-120 Identity = 204/366 (55.74%), Postives = 260/366 (71.04%), Query Frame = -1 Query: 37 EDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVN 1134 E +P ++++LEALK+A ++Q H + S+S IKALLEL + + S DP LS LS HL LK LV +L N GL SFLTR +ST S+SR+A IESEIQ+ +DR ++ +L ++L++P + E LL+Q +RVSQGFN ELQD VLK K FS L++VL D CS +RE+A V+ALIRFNKDVFVGQV MG T++AL+ M S S++VLC LI I+SP VD I NG++P I+ +L S+DL ++VV C LEIGYFGRKEAVEAM+ GL+EKLVELQRSE GGDLI + G+++ LE PFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VR+ASV+ Sbjct: 7 EKSPQLVRVLEALKEATHDIQRHHS-----SDSPAIKALLELHS---ILSSSDPYLSALSDHLIRLKTLVHSL--NHSNGLLSFLTRPLSTLSLSRLASQIESEIQSWIDRETLHTLSSSLRNP-NNNHEFVSLLTQSIYRVSQGFNRELQDLVLKLKLFSSLESVLFDDKCSIPVREQAGLAVSALIRFNKDVFVGQVLMGPTVRALVSMGSVLSLEVLCSLIRSIRSPLVDEIESNGDIPNIIAMLNSEDLELRVVALGCALEIGYFGRKEAVEAMMKEGLVEKLVELQRSEKGGDLIEI-----------GREKVSGVLERKPFASCVARFAVQLEVGEGLRQREKRAFKPEILIRVRDASVS 350
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: K4CBN6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g007660.1 PE=4 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 1.128e-116 Identity = 218/410 (53.17%), Postives = 283/410 (69.02%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSS----PIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRG-YG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW---------KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLC-DPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSE------GKKR---EKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED +E+ +LK+LEALKQA Q+LQ++P + +S+SS IKALLEL+T SD P L LS HL++LK L+ +L +++ +G ++SFLTRRV T+ I++VA SIESEIQA +DR SI +L N L+ +DEDE+ L+ F R+SQGFN LQ+ +LKSK FS L+ ++C D N ++IREKA + + ++ FNKDVFVGQ+ MG TI+AL+ M S S++VL LI I+SPFVDV+ G + K ++ L S DL KV + +LEIGYFGRKEAVEAMLN LI+KLV LQRS+ GGDLI +GK +E + KKR EK+FLE HPFASCVARF VQLEVGEGLR+REKR FK EIL+K+R+A DAEAATI+AEVL Sbjct: 1 MED---EEETQQILKVLEALKQASQQLQSNPESDTSESDSSSSSSAIKALLELDTYSD------PNLLNLSNHLSDLKTLISSLHKSKHKHGRIKSFLTRRVKTHEITKVAESIESEIQAWIDRESITNLTNQLQQIRLQSNSSQYEEDEDEIVEKLTIFHDRLSQGFNINLQELLLKSKIFSELEFLICCDGNIPEKIREKAGYALKEVVLFNKDVFVGQILMGQTIKALISMDSLCSLEVLSSLIKAIRSPFVDVLESVGGISKSISYLNSDDLPFKVTAMDFVLEIGYFGRKEAVEAMLNCDLIKKLVGLQRSDLGGDLIDLGKVHDEEIDEDEHEEKTKKKRGNKEKRFLEKHPFASCVARFTVQLEVGEGLRQREKRGFKQEILKKIRDACDTDAEAATIVAEVL 401
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A068UQ73_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_45 OS=Coffea canephora GN=GSCOC_T00031206001 PE=4 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 1.199e-113 Identity = 199/404 (49.26%), Postives = 278/404 (68.81%), Query Frame = -1 Query: 1 VLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLER-NRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW---------------KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNEN-------------EVSEGKK--REKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1119 VLK+L+ALK+A +LQ KS S+++ +KALLELE S+SI+S DP L+TLS L++LK L++ + G+RSFLT R + ISR+A SIESEIQA +DR +I++L L++ W +DE+ L LSQ R+ QGF+ +LQD +LKS+ L+++LC+ + SK++ E AA+ + L+ FNKDVFVG+V +G TI++L+ M + S+ VL LI +KSP VD + G + KI+ L+S D++ K++ +C++EIGY+GRKEAVEAML+ G+I+KLV LQRSE GGDL+ MGK +E + G+K +E ++LE HPFASCVARFAVQ+EVGEGLR+REKRAFK EIL+++REASV+DAEAAT+IAEVL Sbjct: 19 VLKVLQALKEASHQLQT----KSADSSNASVKALLELEFVSNSILSSDPHLTTLSADLSDLKNLIQRQQSCEPTTGIRSFLTNRFRAHEISRLASSIESEIQAWIDRETINNLTETLEE-WSSSNNIVLGSSPAASRDEESLLAQLSQLRIRLVQGFDIDLQDMLLKSRLLQKLKSLLCNGHVSKRVHEMAAYSLKELVLFNKDVFVGEVLVGQTIKSLVLMGTFFSLDVLKSLIKAVKSPLVDELEPFGGILKIVNTLDSADMATKIMALDCLMEIGYYGRKEAVEAMLSAGIIKKLVYLQRSELGGDLVDMGKGKSEEFGGENGVNVGGVEKSGRGRKGCKEMRYLECHPFASCVARFAVQVEVGEGLRQREKRAFKQEILKRIREASVSDAEAATVIAEVL 417
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: M1D0T4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030680 PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.328e-110 Identity = 214/416 (51.44%), Postives = 275/416 (66.11%), Query Frame = -1 Query: 1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSS---PIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRG-YG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRL---------LSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLC-DPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYG----------------NENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155 MED +E+ +LK+LEALKQA Q+LQ++P + +S+SS IKALLEL+T SD P L LS HL++LK L+ +L +++ +G ++SFLTRRV T+ I++VA SIESEIQA +DR SI +L N L+ + L+ F R+SQGFN LQD +LKSK FS L+ +LC + N +++REKA + + ++ FNKDVFVGQV +G TI+AL+ M S S++VL LI I+SP VDVI G + K ++ L S DL KV + +LEIGYFGRKEAVEAMLN GLI KLVELQRS+ GGDLI +GK + + REK+FLE HPFASCVARF VQLEVGEGLR+REKR FK EIL+K+REA DAEAATI+AEVL Sbjct: 1 MED---EEETQQILKVLEALKQASQQLQSNPESDTSESDSSSSSAIKALLELDTYSD------PNLLNLSHHLSDLKTLISSLHKSKHKHGRIKSFLTRRVKTHEITKVAESIESEIQAWIDRESITNLTNQLQQIRLQSNSSQYEEEEDEIVEKLTIFHDRLSQGFNINLQDLLLKSKIFSELEFLLCCNCNVPQKVREKAGYALKEVVLFNKDVFVGQVLIGQTIKALISMDSLCSLEVLSSLIKAIRSPLVDVIESVGGISKAISYLNSDDLPFKVTAMDFVLEIGYFGRKEAVEAMLNCGLINKLVELQRSDLGGDLIDLGKVHEDSEEEIDEDEPEEKGKTKKKKKRGNREKRFLEKHPFASCVARFTVQLEVGEGLRQREKRGFKQEILKKIREACNTDAEAATIVAEVL 407 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0018389 ID=g.arboreum_cottongen_reftransV1_0018389; Name=g.arboreum_cottongen_reftransV1_0018389; organism=Gossypium arboreum; type=contig; length=1230bpback to top |