g.arboreum_cottongen_reftransV1_0018389, g.arboreum_cottongen_reftransV1_0018389 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0018389
Unique Nameg.arboreum_cottongen_reftransV1_0018389
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1230
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeg.arboreum_cottongen_reftransV1_0018389:1..1230 .
Chr10:69478548..69479777 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A5APZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030235 PE=4 SV=1)

HSP 1 Score: 454.907 bits (1169), Expect = 3.978e-153
Identity = 242/396 (61.11%), Postives = 297/396 (75.00%), Query Frame = -1
Query:    4 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVS-------EGKK-----REKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEV 1155
            ME++S    NP VL +LEAL+QA   LQ +PT  S  SNSS IKALLELETES+S++S DP LS LSRHL+ LK LV TL+++RG+ L SFLTRR ST SISRVAGSIESEI+A +DR  ++ L  AL++   D+DEL +LL+QFE+RVSQGF+ ELQD +LKSK FS+L++VLC+PNCSK+IRE + F V+ALIRFNKDVFVG V MG T+ AL+ M S  S+ VL  LI  IKSP VD I  NGE+PKI++   S+DL +++   +C  EIGY+GRKEA+EAML  G+IEKL+ELQRSE GG LI MG +  E  +        EG +     REK+FLE HPFASCVARFAVQLEVGEGLR+REKR FK EIL  VREA  +DAEAA I+AE+
Sbjct:    1 MEEAS-DHPNPQVLTVLEALRQASHHLQTNPTLNSDNSNSSAIKALLELETESNSLLSSDPHLSALSRHLSSLKDLVHTLQKSRGHSLTSFLTRRASTQSISRVAGSIESEIRAWIDRERVEDLTRALREL-ADDDELVKLLTQFENRVSQGFSHELQDLILKSKVFSLLESVLCNPNCSKKIREHSGFAVSALIRFNKDVFVGXVLMGRTVLALIAMGSRSSLTVLWSLIKSIKSPLVDEIESNGEIPKIISFFSSQDLDIRIAAVDCAFEIGYYGRKEAIEAMLKEGVIEKLLELQRSEMGGILIEMGWFNEEENMKSFDGVDIEGIRRSRDSREKRFLETHPFASCVARFAVQLEVGEGLRQREKRXFKQEILGLVREACASDAEAAXIVAEL 394          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A059CMI1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00582 PE=4 SV=1)

HSP 1 Score: 446.817 bits (1148), Expect = 1.901e-151
Identity = 234/385 (60.78%), Postives = 291/385 (75.58%), Query Frame = -1
Query:    1 PGVLKLLEALKQAIQELQAHPTHKSV---QSNSSP-IKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW-KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKY-----GNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1125
            P VL +LEALK+A  +L + P   +     S  SP +KALLELETESDS++S+DP LS LS HL+ L+ LV    ++RG+GL SFL RR S +SISRVA SIESEIQA +DR +++ L+  L+     DE+EL +LLSQ E RV +GF  ELQD +L+S+ F +L+T LC+ NCSK+IRE   F +AALIRFNKDVFVGQV MG TI+AL+ M SAHS++VLC LI  IKSP VD I  NG++PKI+  L  +DL +KVV  +CILEIGYFGRKEA+EAM+  GL++KLVELQRSE GGDLI +G++       E+  + GK + ++FLE+HPFASCVARFAVQLEVGEGLR REKRAFK EIL +VREAS NDAEAATI+AEVL
Sbjct:   10 PDVLSVLEALKKASHDLHSDPKSTAAAPPDSGCSPAVKALLELETESDSLLSRDPNLSALSAHLSTLRSLVSAQPKSRGHGLGSFLARRASAHSISRVAESIESEIQAWIDRETVEKLVAGLRGKGCGDEEELVQLLSQLEARVLRGFERELQDLLLRSRLFGLLETALCNQNCSKRIREHIGFAIAALIRFNKDVFVGQVPMGATIRALITMASAHSLRVLCSLIKSIKSPLVDEIESNGQIPKIINFLSHEDLQVKVVAMDCILEIGYFGRKEAIEAMIEEGLVKKLVELQRSELGGDLIDLGRFEESEIETESVTNAGKSKTRRFLESHPFASCVARFAVQLEVGEGLRGREKRAFKLEILARVREASANDAEAATIVAEVL 394          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: W9R389_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024912 PE=4 SV=1)

HSP 1 Score: 446.432 bits (1147), Expect = 5.304e-151
Identity = 253/404 (62.62%), Postives = 308/404 (76.24%), Query Frame = -1
Query:    1 DSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGY-GLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGK------------YGNENEVSEG--------KKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1149
            D  PK + P VLK+LEALKQA ++LQAHP+  S  SNSS IKALLELETESD+I+SKDP LSTLS+ LA LK  VETL+++R + G+ SF+ RRVSTYSISRVA SI +EIQA +DR S+++L  AL++  ++EDEL  LL+QFE RVS+GFN ELQD VLKSK F+ L++VLCD   SK+IRE+ A  + ALIRFNKDVFVGQV MG TI+AL+ M S  S+KVLC LI  IKSP VD I  NGELP+I+ LL ++ L M+V+ F C+LEIGYFGRKEA++AM+  GLI+ LVELQRSE GGDLIG+ +                 EVS G        + RE++FLE+HPFASCVARFAVQLEVGEGLR+REKRAFK +IL  VREASV+DAEAATI+AEVL
Sbjct:    2 DDFPKRETPRVLKVLEALKQASRDLQAHPSPDSDDSNSSAIKALLELETESDTILSKDPNLSTLSQLLARLKTHVETLQKSRAHHGISSFVARRVSTYSISRVAVSIGTEIQAWIDRESVENLARALRER-ENEDELVGLLTQFEDRVSEGFNRELQDLVLKSKIFASLESVLCDTGSSKRIRERCALAIGALIRFNKDVFVGQVLMGPTIKALITMSSTCSMKVLCGLIRSIKSPLVDEIESNGELPRIINLLNNQYLQMRVLAFECVLEIGYFGRKEAIDAMMEEGLIKILVELQRSELGGDLIGLERCEGESESESENEGEKSREVSVGGVVLERRRESRERRFLESHPFASCVARFAVQLEVGEGLRQREKRAFKQQILVGVREASVSDAEAATILAEVL 404          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: V7CDV1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G170800g PE=4 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 3.828e-135
Identity = 224/385 (58.18%), Postives = 278/385 (72.21%), Query Frame = -1
Query:    1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155
            ME+S   E  PG+L++LEALK+A   +Q H T     S+S  +KALLEL+T    + S DP L  LS +L  LK LV +L  N   GLRSFLTR +ST+ +SR+A SIESEIQA +DR ++ +L  +L++P    D+L  LL+QF  R+SQGFN +LQD VLK K FS L+TVL D  C+ + RE+A   VAALIRFNKDVFVGQV MG T++AL+ M S +SV+VLC LI  I+SP VD I  NGE+PK++ LL S+DL ++++   C+LEIGYFGRKEAV+AM+  GL+EKLVELQRSE G DLI +           GK R    LE HPFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VREAS++DAEAATI AEVL
Sbjct:    1 MEES---EKAPGMLQVLEALKEATHHIQQHHT-----SDSPAVKALLELQT---ILSSSDPKLCALSDYLNRLKTLVHSL--NHSKGLRSFLTRPLSTHCLSRLAVSIESEIQAWIDRETLFTLSASLRNPDDAIDQLMALLTQFRDRISQGFNRDLQDLVLKLKLFSSLETVLLDEKCADRAREQAGLAVAALIRFNKDVFVGQVMMGPTVRALVAMGSMYSVEVLCSLIRSIRSPLVDEIESNGEIPKVMALLSSRDLQLQLLALECVLEIGYFGRKEAVDAMVKEGLVEKLVELQRSETGDDLIEI-----------GKGRVCGVLERHPFASCVARFAVQLEVGEGLRQREKRAFKPEILVRVREASLSDAEAATIAAEVL 361          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: F6H332_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g06510 PE=4 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.561e-121
Identity = 199/385 (51.69%), Postives = 274/385 (71.17%), Query Frame = -1
Query:    1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155
            M ++S K  N  V  +LEA+K+A ++LQ +P   +  +  S IK+LLEL+ E +SI+S DP L  LS+ L  LK L++ LE ++GYG RSF+ R+++ Y  SRVA SI  EI+A +D  S+ +L+  +++   DEDE   +L +FE RVSQGF+ +LQD +L++K F++++++LCD  CS  IRE++A  + +L+RFNKDVFVG V MG TI+ L+ + S  S++VL  LI  IKSP +D+I  NGE+PKI++LL S DLS++V   +CILEIGYFGRKEA+EAM   GLIEKL+ELQRSE  GD I       E E   G   E +      F+SCVARFAVQLEVGEGLR+REKR FK E+L++V+E+SV++AEAATI+AEVL
Sbjct:    1 MGEASNKH-NQHVFTVLEAIKKASKDLQTNPISFT-NTYQSTIKSLLELKNEENSILSTDPSLLKLSQLLNSLKALLDKLENSQGYGFRSFVRRQLTYYEASRVASSIRDEIKAWVDHESLKNLVRTIEES-GDEDEKIEVLKEFESRVSQGFDRDLQDLILRTKIFTIVESILCDSQCSVSIREESAAVIVSLVRFNKDVFVGLVLMGPTIRVLISISSCRSIQVLTSLIKLIKSPLIDIIESNGEIPKIISLLSSPDLSIQVAAMDCILEIGYFGRKEAIEAMFGDGLIEKLMELQRSENEGDSI------TETENGGGGCEEPEMGLKRRFSSCVARFAVQLEVGEGLRQREKREFKLEVLKRVKESSVSEAEAATIVAEVL 376          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: Q402G4_SOYBN (Putative uncharacterized protein GmTDF-5 OS=Glycine max GN=GmTDF-5 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 3.248e-121
Identity = 205/366 (56.01%), Postives = 260/366 (71.04%), Query Frame = -1
Query:   37 EDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVN 1134
            E +P ++++LEALK+A  ++Q H +     S+S  IKALLEL +    + S DP LS LS HL  LK LV +L  N   GL SFLTR +ST S+SR+A  IESEIQ+ +DR ++ +L ++L++P  +  E   LL+Q  +RVSQGFN ELQD VLK K FS L++VL D  CS  +RE+A   V+ALIRFNKDVFVGQV MG T++AL+ M S  S++VLC LI  I+SP VD I  NGE+P I+ +L S+DL ++VV   C LEIGYFGRKEAVEAM+  GL+EKLVELQRSE GGDLI +           G+++    LE  PFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VR+ASV+
Sbjct:    7 EKSPQLVRVLEALKEATHDIQRHHS-----SDSPAIKALLELHS---ILSSSDPYLSALSDHLIRLKTLVHSL--NHSNGLLSFLTRPLSTLSLSRLASQIESEIQSWIDRETLHTLSSSLRNP-NNNHEFVSLLTQSIYRVSQGFNRELQDLVLKLKLFSSLESVLFDDKCSIPVREQAGLAVSALIRFNKDVFVGQVLMGPTVRALVSMGSVLSLEVLCSLIRSIRSPLVDEIESNGEIPNIIAMLNSEDLELRVVALGCALEIGYFGRKEAVEAMMKEGLVEKLVELQRSEKGGDLIEI-----------GREKVSGVLERKPFASCVARFAVQLEVGEGLRQREKRAFKPEILIRVRDASVS 350          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A0B2Q128_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011658 PE=4 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 1.179e-120
Identity = 204/366 (55.74%), Postives = 260/366 (71.04%), Query Frame = -1
Query:   37 EDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVN 1134
            E +P ++++LEALK+A  ++Q H +     S+S  IKALLEL +    + S DP LS LS HL  LK LV +L  N   GL SFLTR +ST S+SR+A  IESEIQ+ +DR ++ +L ++L++P  +  E   LL+Q  +RVSQGFN ELQD VLK K FS L++VL D  CS  +RE+A   V+ALIRFNKDVFVGQV MG T++AL+ M S  S++VLC LI  I+SP VD I  NG++P I+ +L S+DL ++VV   C LEIGYFGRKEAVEAM+  GL+EKLVELQRSE GGDLI +           G+++    LE  PFASCVARFAVQLEVGEGLR+REKRAFKPEIL +VR+ASV+
Sbjct:    7 EKSPQLVRVLEALKEATHDIQRHHS-----SDSPAIKALLELHS---ILSSSDPYLSALSDHLIRLKTLVHSL--NHSNGLLSFLTRPLSTLSLSRLASQIESEIQSWIDRETLHTLSSSLRNP-NNNHEFVSLLTQSIYRVSQGFNRELQDLVLKLKLFSSLESVLFDDKCSIPVREQAGLAVSALIRFNKDVFVGQVLMGPTVRALVSMGSVLSLEVLCSLIRSIRSPLVDEIESNGDIPNIIAMLNSEDLELRVVALGCALEIGYFGRKEAVEAMMKEGLVEKLVELQRSEKGGDLIEI-----------GREKVSGVLERKPFASCVARFAVQLEVGEGLRQREKRAFKPEILIRVRDASVS 350          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: K4CBN6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g007660.1 PE=4 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 1.128e-116
Identity = 218/410 (53.17%), Postives = 283/410 (69.02%), Query Frame = -1
Query:    1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSS----PIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRG-YG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW---------KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLC-DPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNENEVSE------GKKR---EKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155
            MED   +E+   +LK+LEALKQA Q+LQ++P   + +S+SS     IKALLEL+T SD      P L  LS HL++LK L+ +L +++  +G ++SFLTRRV T+ I++VA SIESEIQA +DR SI +L N L+            +DEDE+   L+ F  R+SQGFN  LQ+ +LKSK FS L+ ++C D N  ++IREKA + +  ++ FNKDVFVGQ+ MG TI+AL+ M S  S++VL  LI  I+SPFVDV+   G + K ++ L S DL  KV   + +LEIGYFGRKEAVEAMLN  LI+KLV LQRS+ GGDLI +GK  +E    +       KKR   EK+FLE HPFASCVARF VQLEVGEGLR+REKR FK EIL+K+R+A   DAEAATI+AEVL
Sbjct:    1 MED---EEETQQILKVLEALKQASQQLQSNPESDTSESDSSSSSSAIKALLELDTYSD------PNLLNLSNHLSDLKTLISSLHKSKHKHGRIKSFLTRRVKTHEITKVAESIESEIQAWIDRESITNLTNQLQQIRLQSNSSQYEEDEDEIVEKLTIFHDRLSQGFNINLQELLLKSKIFSELEFLICCDGNIPEKIREKAGYALKEVVLFNKDVFVGQILMGQTIKALISMDSLCSLEVLSSLIKAIRSPFVDVLESVGGISKSISYLNSDDLPFKVTAMDFVLEIGYFGRKEAVEAMLNCDLIKKLVGLQRSDLGGDLIDLGKVHDEEIDEDEHEEKTKKKRGNKEKRFLEKHPFASCVARFTVQLEVGEGLRQREKRGFKQEILKKIRDACDTDAEAATIVAEVL 401          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: A0A068UQ73_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_45 OS=Coffea canephora GN=GSCOC_T00031206001 PE=4 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 1.199e-113
Identity = 199/404 (49.26%), Postives = 278/404 (68.81%), Query Frame = -1
Query:    1 VLKLLEALKQAIQELQAHPTHKSVQSNSSPIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLER-NRGYGLRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPW---------------KDEDELSRLLSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLCDPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYGNEN-------------EVSEGKK--REKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1119
            VLK+L+ALK+A  +LQ     KS  S+++ +KALLELE  S+SI+S DP L+TLS  L++LK L++  +      G+RSFLT R   + ISR+A SIESEIQA +DR +I++L   L++ W               +DE+ L   LSQ   R+ QGF+ +LQD +LKS+    L+++LC+ + SK++ E AA+ +  L+ FNKDVFVG+V +G TI++L+ M +  S+ VL  LI  +KSP VD +   G + KI+  L+S D++ K++  +C++EIGY+GRKEAVEAML+ G+I+KLV LQRSE GGDL+ MGK  +E              +   G+K  +E ++LE HPFASCVARFAVQ+EVGEGLR+REKRAFK EIL+++REASV+DAEAAT+IAEVL
Sbjct:   19 VLKVLQALKEASHQLQT----KSADSSNASVKALLELEFVSNSILSSDPHLTTLSADLSDLKNLIQRQQSCEPTTGIRSFLTNRFRAHEISRLASSIESEIQAWIDRETINNLTETLEE-WSSSNNIVLGSSPAASRDEESLLAQLSQLRIRLVQGFDIDLQDMLLKSRLLQKLKSLLCNGHVSKRVHEMAAYSLKELVLFNKDVFVGEVLVGQTIKSLVLMGTFFSLDVLKSLIKAVKSPLVDELEPFGGILKIVNTLDSADMATKIMALDCLMEIGYYGRKEAVEAMLSAGIIKKLVYLQRSELGGDLVDMGKGKSEEFGGENGVNVGGVEKSGRGRKGCKEMRYLECHPFASCVARFAVQVEVGEGLRQREKRAFKQEILKRIREASVSDAEAATVIAEVL 417          
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Match: M1D0T4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030680 PE=4 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.328e-110
Identity = 214/416 (51.44%), Postives = 275/416 (66.11%), Query Frame = -1
Query:    1 MEDSSPKEDNPGVLKLLEALKQAIQELQAHPTHKSVQSNSS---PIKALLELETESDSIISKDPLLSTLSRHLAELKILVETLERNRG-YG-LRSFLTRRVSTYSISRVAGSIESEIQALMDRGSIDSLINALKDPWKDEDELSRL---------LSQFEHRVSQGFNPELQDSVLKSKAFSVLQTVLC-DPNCSKQIREKAAFCVAALIRFNKDVFVGQVNMGDTIQALLEMKSAHSVKVLCELITFIKSPFVDVILCNGELPKILTLLESKDLSMKVVVFNCILEIGYFGRKEAVEAMLNGGLIEKLVELQRSEFGGDLIGMGKYG----------------NENEVSEGKKREKKFLENHPFASCVARFAVQLEVGEGLRKREKRAFKPEILEKVREASVNDAEAATIIAEVL 1155
            MED   +E+   +LK+LEALKQA Q+LQ++P   + +S+SS    IKALLEL+T SD      P L  LS HL++LK L+ +L +++  +G ++SFLTRRV T+ I++VA SIESEIQA +DR SI +L N L+      +              L+ F  R+SQGFN  LQD +LKSK FS L+ +LC + N  +++REKA + +  ++ FNKDVFVGQV +G TI+AL+ M S  S++VL  LI  I+SP VDVI   G + K ++ L S DL  KV   + +LEIGYFGRKEAVEAMLN GLI KLVELQRS+ GGDLI +GK                     +  +   REK+FLE HPFASCVARF VQLEVGEGLR+REKR FK EIL+K+REA   DAEAATI+AEVL
Sbjct:    1 MED---EEETQQILKVLEALKQASQQLQSNPESDTSESDSSSSSAIKALLELDTYSD------PNLLNLSHHLSDLKTLISSLHKSKHKHGRIKSFLTRRVKTHEITKVAESIESEIQAWIDRESITNLTNQLQQIRLQSNSSQYEEEEDEIVEKLTIFHDRLSQGFNINLQDLLLKSKIFSELEFLLCCNCNVPQKVREKAGYALKEVVLFNKDVFVGQVLIGQTIKALISMDSLCSLEVLSSLIKAIRSPLVDVIESVGGISKAISYLNSDDLPFKVTAMDFVLEIGYFGRKEAVEAMLNCGLINKLVELQRSDLGGDLIDLGKVHEDSEEEIDEDEPEEKGKTKKKKKRGNREKRFLEKHPFASCVARFTVQLEVGEGLRQREKRGFKQEILKKIREACNTDAEAATIVAEVL 407          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A5APZ1_VITVI3.978e-15361.11Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A059CMI1_EUCGR1.901e-15160.78Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
W9R389_9ROSA5.304e-15162.62Uncharacterized protein OS=Morus notabilis GN=L484... [more]
V7CDV1_PHAVU3.828e-13558.18Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
F6H332_VITVI1.561e-12151.69Putative uncharacterized protein OS=Vitis vinifera... [more]
Q402G4_SOYBN3.248e-12156.01Putative uncharacterized protein GmTDF-5 OS=Glycin... [more]
A0A0B2Q128_GLYSO1.179e-12055.74Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
K4CBN6_SOLLC1.128e-11653.17Uncharacterized protein OS=Solanum lycopersicum GN... [more]
A0A068UQ73_COFCA1.199e-11349.26Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
M1D0T4_SOLTU1.328e-11051.44Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0018389 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availablePANTHERPTHR35834FAMILY NOT NAMEDcoord: 3..385
NoneNo IPR availablePANTHERPTHR35834:SF2SUBFAMILY NOT NAMEDcoord: 3..385
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 103..301
e-value: 4.4E-12
score: 44.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 17..301

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0018389 ID=g.arboreum_cottongen_reftransV1_0018389; Name=g.arboreum_cottongen_reftransV1_0018389; organism=Gossypium arboreum; type=contig; length=1230bp
CAAAACTTCAGCAATTATGGTAGCAGCCTCAGCATCATTAACAGATGCTT
CCCTAACTTTCTCCAGAATCTCTGGTTTAAAAGCCCTTTTCTCCCTTTTC
CTCAACCCTTCCCCAACCTCTAATTGCACTGCAAACCTTGCCACACAGCT
TGCAAATGGATGATTCTCTAAAAATTTCTTTTCTCTTTTCTTCCCCTCAC
TCACCTCATTCTCATTTCCATACTTTCCCATCCCTATCAAATCACCACCA
AATTCTGACCTCTGCAACTCCACAAGTTTTTCTATCAAACCCCCATTAAG
CATAGCTTCAACAGCTTCTTTACGTCCAAAGTAACCAATCTCAAGAATGC
AATTAAAGACCACCACTTTCATGCTCAAATCTTTGGATTCTAATAAAGTT
AAAATCTTGGGAAGTTCCCCATTACAGAGAATTACATCAACAAATGGAGA
TTTAATAAATGTAATCAACTCACATAGAACTTTTACGCTATGGGCTGATT
TCATCTCCAAAAGAGCTTGAATTGTATCTCCCATATTCACTTGGCCGACG
AAGACATCCTTGTTGAATCGAATCAAAGCGGCTACACAAAACGCAGCTTT
TTCCCTGATCTGTTTTGAACAATTCGGGTCGCAAAGCACTGTTTGTAAAA
CCGAAAAGGCTTTCGATTTCAAGACTGAATCCTGCAACTCGGGATTAAAC
CCTTGTGATACTCGGTGTTCAAACTGACTCAGTAACCGAGATAACTCGTC
CTCGTCCTTCCAGGGATCTTTCAAAGCATTTATCAAGCTATCGATACTCC
CACGATCCATCAAGGCTTGAATCTCGGACTCGATCGAGCCAGCAACTCGA
GAGATGGAATAAGTCGACACACGACGAGTCAAAAAACTCCTGAGACCATA
ACCACGATTCCTTTCTAGGGTTTCGACGAGGATCTTGAGCTCAGCCAAGT
GTCGGGAAAGAGTAGAAAGAAGTGGGTCTTTCGAGATGATCGAATCGGAC
TCGGTTTCAAGCTCGAGAAGAGCTTTAATTGGAGATGAGTTAGACTGAAC
CGATTTGTGAGTTGGATGAGCTTGTAACTCCTGGATTGCTTGTTTCAAAG
CTTCGAGAAGCTTCAGAACTCCAGGGTTGTCTTCTTTGGGCGATGAGTCT
TCCATTTTTTTGTTGCAGATGTAGATTTTCTTCTTTCACAGTTTACATAG
AAACAAACTACAATAGACTCTTGTTTTAGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding