g.arboreum_cottongen_reftransV1_0003209, g.arboreum_cottongen_reftransV1_0003209 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0003209
Unique Name	g.arboreum_cottongen_reftransV1_0003209
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	557

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0003209:1..557 . Chr7:115204740..115214543 +		n/a

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2SKX9_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_010G015000 PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.248e-53
Identity = 94/136 (69.12%), Postives = 118/136 (86.76%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +FFEL+GKF+++DALPFLRWL+IGG+ K MKK +KELDQ+V+GWLREH++K AEN+ANSEEDFMGVMLS L D E+   +T NKA SL +++AAEDTTS+T+TWAL+LLLNNRD L+KVQQELD+ VGKD
Sbjct:  225 WKKYLDDFFELSGKFLISDALPFLRWLNIGGDMKCMKKTAKELDQVVQGWLREHKQKRAENKANSEEDFMGVMLSILSDAEELHVDTSNKAISLAIIIAAEDTTSVTLTWALSLLLNNRDTLSKVQQELDVKVGKD 360

HSP 2 Score: 73.1738 bits (178), Expect = 1.248e-53
Identity = 32/53 (60.38%), Postives = 45/53 (84.91%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KKS++ DKVLVEM+ WF++VTLNVI+ M+VGKR+PNS EG E ++WK  +++F
Sbjct:  180 KKSTNSDKVLVEMKGWFKEVTLNVIMRMIVGKRLPNSSEGGENLKWKKYLDDF 232

HSP 3 Score: 132.88 bits (333), Expect = 2.865e-43
Identity = 61/95 (64.21%), Postives = 80/95 (84.21%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLT 433
            W+  + +FF L+GKF+++DALPFLR+LDIGG+ K MKK +KELDQ+V+GWL+EH++K AEN+AN EEDFMGVMLS L + E+H A+TINK N LT
Sbjct:  721 WRKSMDDFFVLSGKFLISDALPFLRFLDIGGDIKFMKKTAKELDQVVQGWLQEHKQKRAENKANGEEDFMGVMLSILSEAEEHHADTINKINCLT 815

HSP 4 Score: 68.9366 bits (167), Expect = 2.865e-43
Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            + ++ DKVLVEMR WF++VTLNVI+ M+VGKRIPNS EG E ++W+  +++F
Sbjct:  677 QHANSDKVLVEMRGWFKEVTLNVIMWMIVGKRIPNSSEGGENLKWRKSMDDF 728

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A061FCL1_THECC (Cytochrome P450 OS=Theobroma cacao GN=TCM_033952 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.056e-51
Identity = 84/136 (61.76%), Postives = 111/136 (81.62%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK+ + +FF+L+GKFV++DALPFL+WLDIGG+E+ MKKV+KELD++ EGWL++H+   A     S++DFM VM S L DV +HDA+TINKA  L ++LAA DTT +T+TWAL+LLLNNR AL K Q+ELDIHVG+D
Sbjct:  223 WKDALRDFFDLSGKFVISDALPFLKWLDIGGDERFMKKVTKELDEVAEGWLQDHKRMKASGNQESDQDFMDVMFSILSDVGKHDADTINKATCLAMILAASDTTMVTLTWALSLLLNNRGALKKAQEELDIHVGRD 358

HSP 2 Score: 66.6254 bits (161), Expect = 1.056e-51
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 1

Query:   13 SGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            S DKVLVEM+ WFRDVTLNVIL M+VGKRIP+S    E   WK+ + +F
Sbjct:  182 SSDKVLVEMKAWFRDVTLNVILRMIVGKRIPSSDSDAEGERWKDALRDF 230

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A061FJI0_THECC (Cytochrome P450 82A3, putative OS=Theobroma cacao GN=TCM_033953 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.328e-50
Identity = 86/137 (62.77%), Postives = 111/137 (81.02%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLR-DVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK+ + +FF+L+GKFV++DALPFLRWLD+GG+EK MKKV KELD++ EGWL++H++K A     S++DFM VM S L  D  +HDA TINKAN L L+L   DTT++T+TWAL+LLLNNRDAL K Q+ELDIHVG+D
Sbjct:  223 WKDALQDFFDLSGKFVISDALPFLRWLDVGGDEKFMKKVRKELDEVAEGWLQDHKQKTASGNQESDQDFMDVMFSILSTDAGKHDAETINKANCLNLILGGFDTTTVTLTWALSLLLNNRDALKKAQEELDIHVGRD 359

HSP 2 Score: 64.6994 bits (156), Expect = 1.328e-50
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            +   S DKVL++M+ WFRDVTLNV+L M+VGKRIP+S    E   WK+ +++F
Sbjct:  178 ENKGSSDKVLLDMKAWFRDVTLNVMLRMIVGKRIPSSGSDAEGERWKDALQDF 230

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2MAG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G130200 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.514e-50
Identity = 86/137 (62.77%), Postives = 110/137 (80.29%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEED-FMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + EFF+L+GKFVV+DALP+LRW DIGG+E+ MKKV KELD++ EGWL++H+ K + ++ N   D FM VMLS   D E+HDA+TINKA  L L+LAA DTT +T+TWAL+LLLNN+D L K+Q+ELDIHVGKD
Sbjct:  220 WKTSLKEFFDLSGKFVVSDALPYLRWFDIGGDERLMKKVRKELDEVAEGWLKDHKGKRSSDKLNKSNDGFMDVMLSIATDTEKHDADTINKATCLALILAASDTTMVTLTWALSLLLNNKDELRKLQEELDIHVGKD 356

HSP 2 Score: 63.1586 bits (152), Expect = 9.514e-50
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            +K    D VLVEM++WF+  TLNVIL M+VGKRIP+S    E+ +WK  ++EF
Sbjct:  175 EKKDGSDTVLVEMKKWFKSATLNVILRMIVGKRIPSSTNDAESEKWKTSLKEF 227

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2SKW9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014200 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.162e-46
Identity = 64/97 (65.98%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVL 442
            K L+ +FFE+AGKFV++D LPFL+WL++GG EK MKK++KELD++VEGWLREH+ K  E+ ANSEEDFMGVML  LRD E+HDA+TINKA SL++ +
Sbjct:  227 KELLEDFFEMAGKFVISDTLPFLKWLNVGGYEKSMKKIAKELDRIVEGWLREHKCKRGEDGANSEEDFMGVMLPILRDAEEHDADTINKATSLSICV 323

HSP 2 Score: 69.3218 bits (168), Expect = 1.162e-46
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KK ++ DKVLVEM+RWFRDVTLNV + ++VGKRI +S EG ET++ K L+E+F
Sbjct:  181 KKGTNCDKVLVEMKRWFRDVTLNVSMRIIVGKRISSSSEGGETMKCKELLEDF 233

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2U775_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014200 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.889e-46
Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSL 430
            K L+ +FFE+AGKFV++D LPFL+WL++GG EK MKK++KELD++VEGWLREH+ K  E+ ANSEEDFMGVML  LRD E+HDA+TINKA SL
Sbjct:  227 KELLEDFFEMAGKFVISDTLPFLKWLNVGGYEKSMKKIAKELDRIVEGWLREHKCKRGEDGANSEEDFMGVMLPILRDAEEHDADTINKATSL 319

HSP 2 Score: 69.3218 bits (168), Expect = 5.889e-46
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KK ++ DKVLVEM+RWFRDVTLNV + ++VGKRI +S EG ET++ K L+E+F
Sbjct:  181 KKGTNCDKVLVEMKRWFRDVTLNVSMRIIVGKRISSSSEGGETMKCKELLEDF 233

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A0D2V421_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G014200 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.037e-46
Identity = 64/93 (68.82%), Postives = 80/93 (86.02%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSL 430
            K L+ +FFE+AGKFV++D LPFL+WL++GG EK MKK++KELD++VEGWLREH+ K  E+ ANSEEDFMGVML  LRD E+HDA+TINKA SL
Sbjct:  227 KELLEDFFEMAGKFVISDTLPFLKWLNVGGYEKSMKKIAKELDRIVEGWLREHKCKRGEDGANSEEDFMGVMLPILRDAEEHDADTINKATSL 319

HSP 2 Score: 69.3218 bits (168), Expect = 6.037e-46
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            KK ++ DKVLVEM+RWFRDVTLNV + ++VGKRI +S EG ET++ K L+E+F
Sbjct:  181 KKGTNCDKVLVEMKRWFRDVTLNVSMRIIVGKRISSSSEGGETMKCKELLEDF 233

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A061FBB3_THECC (Cytochrome P450 82A3, putative OS=Theobroma cacao GN=TCM_033949 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.119e-42
Identity = 90/142 (63.38%), Postives = 113/142 (79.58%), Query Frame = 2

Query:  134 NGRIWWKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENE-ANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            +GR  WK  + EFFEL+GKF+VADA PFLRWLDIGG+E+ MKKV K L+++ E WL+EH++K A  E  + EEDFM VMLS L D +++DA+TINKA  L L+LAA D T++T+TW LALLLNNRDAL K QQE+DIH+GKD
Sbjct:  322 SGR--WKKALKEFFELSGKFLVADAFPFLRWLDIGGDERLMKKVKKVLNEVAEEWLQEHKQKRASGEFRDEEEDFMDVMLSILTDAKEYDADTINKATCLILILAATDPTAVTLTWCLALLLNNRDALKKAQQEIDIHIGKD 461

HSP 2 Score: 60.4622 bits (145), Expect = 1.081e-7
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            +  +S DKVLVEM +WFRD T NVIL M+VGKRI +     E+  WK  ++EF
Sbjct:  280 ENKNSSDKVLVEMDKWFRDATANVILKMIVGKRISSLGNDAESGRWKKALKEF 332

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: A0A067L2U8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04359 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.307e-41
Identity = 79/140 (56.43%), Postives = 105/140 (75.00%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQ----HDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            WK  + +FFEL+G+F+ ADA+PFLRW DIGG EK MK+ +KELD + E WL+EH++K A    + EEDFM VML+ + D  Q     D++TINKA SL L +AA DTT++T+TWAL+LL+NN + L K Q+ELDIHVGK+
Sbjct:  214 WKKALRDFFELSGRFIAADAVPFLRWFDIGGHEKAMKETAKELDLVAEEWLKEHKKKKASGVKHGEEDFMDVMLNTIDDDVQVALNRDSDTINKATSLGLTVAASDTTTVTLTWALSLLINNPNVLKKAQKELDIHVGKE 353

HSP 2 Score: 51.2174 bits (121), Expect = 1.307e-41
Identity = 26/54 (48.15%), Postives = 37/54 (68.52%), Query Frame = 1

Query:    4 KSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIP--NSYEGVETVEWKNLVEEF 159
            K+SS DKVLVEM+RWF D+T+N+IL M+ GK +    +  G E+  WK  + +F
Sbjct:  169 KTSSNDKVLVEMKRWFGDITINLILKMIFGKSVGYMTTSHG-ESERWKKALRDF 221

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Match: V4T3G9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000851mg PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.913e-41
Identity = 83/137 (60.58%), Postives = 104/137 (75.91%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQH---DANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVG 550
            WK L+  FFE++GKFVV+DALPF+RWLDIGG+E+ MKK++KELD + +GWL EH+ K    E   EEDFM VMLS L D EQ+   D +TINKA  L L+L A DTT++T+TW ++LLLN+RD LNK Q ELDI VG
Sbjct:  221 WKELLTRFFEMSGKFVVSDALPFMRWLDIGGDERSMKKIAKELDVVAQGWLEEHKRKRDSQEIKKEEDFMYVMLSILGDTEQYLGRDVDTINKAICLALILGAADTTTVTLTWVMSLLLNHRDILNKAQNELDIQVG 357

HSP 2 Score: 42.3578 bits (98), Expect = 4.913e-41
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 1

Query:    1 KKSSSGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEEF 159
            K  S+   +LVEM++WF D   NV+L MVVGK        V++ EWK L+  F
Sbjct:  180 KNKSTNKILLVEMKKWFGDTLRNVVLRMVVGK----GCNSVDSEEWKELLTRF 228

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C81E8_MEDTR (Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP81E8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.782e-16
Identity = 47/136 (34.56%), Postives = 79/136 (58.09%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            ++ ++ E   L G   V D L FLRW D  G EKR+KK+SK  D  ++G + EHR    +  +N+  D    +L++ +   ++  + I K   + ++LA  DT+S+T+ WA++ LLN+ + + K + ELD H+G D
Sbjct:  209 FRGIIKEVVSLGGANNVGDFLGFLRWFDFDGLEKRLKKISKRTDAFLQGLIDEHR--FGKRNSNTMIDH---LLTQQQSQPEYYTDQIIKGLMVVMLLAGTDTSSVTIEWAMSNLLNHPEIMKKAKNELDTHIGHD 339

HSP 2 Score: 27.7202 bits (60), Expect = 3.782e-16
Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 1

Query:   31 VEMRRWFRDVTLNVILMMVVGKR 99
            VE+R  F ++T N I+ MV GKR
Sbjct:  170 VELRPMFSEMTFNTIMRMVSGKR 192

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C82G1_ARATH (Cytochrome P450 82G1 OS=Arabidopsis thaliana GN=CYP82G1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.136e-15
Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 2

Query:  194 VVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRD---VEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGK 553
            ++ D +P+L WLD   +  +MK++ KELD +   WL EH +K + NE + E   M ++L  L +   +  H  + I KA  L L L   D+TSIT+TWA++LLLNN  AL   Q+E+D  VGK
Sbjct:  228 MIGDVIPWLGWLDFA-KNSQMKRLFKELDSVNTKWLHEHLKKRSRNEKDQERTIMDLLLDILPEDIVISGHVRDVIVKATILALTLTGSDSTSITLTWAVSLLLNNPAALEAAQEEIDNSVGK 349

HSP 2 Score: 26.5646 bits (57), Expect = 7.136e-15
Identity = 15/43 (34.88%), Postives = 25/43 (58.14%), Query Frame = 1

Query:   13 SGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWK 141
            +G   +V++   F  +T N+IL  +VGKRI   +  V + EW+
Sbjct:  172 NGGTSIVKIDMLFEFLTFNIILRKMVGKRI--GFGEVNSDEWR 212

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: MSH_PAPSO (Methyltetrahydroprotoberberine 14-monooxygenase OS=Papaver somniferum GN=CYP82N4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.343e-15
Identity = 52/145 (35.86%), Postives = 82/145 (56.55%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLD-IGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANS--EEDFMGVMLSKLRDVEQH------DANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            +K  + E   L   F  +D +P L WLD + G  + MKK + E+D ++  W+ EHR K   +  NS  E DF+ V L    D+ +H      D + + K+  L ++L   DTT++T+TWA++LLLN+   L K ++EL+  VGK+
Sbjct:  225 YKAAMDEAMRLMRFFAFSDVIPSLSWLDNLRGLVREMKKCASEIDSIMATWVEEHRVK-RNSGGNSQLEHDFIDVCL----DIMEHSSLPGDDPDLVVKSTCLDMILGGSDTTTVTLTWAMSLLLNHPQVLQKAKEELETQVGKN 364

HSP 2 Score: 28.4906 bits (62), Expect = 9.343e-15
Identity = 15/48 (31.25%), Postives = 25/48 (52.08%), Query Frame = 1

Query:   13 SGDKVLVEMRRWFRDVTLNVILMMVVGKRIPNSYEGVETVEWKNLVEE 156
            SG+   V M  W  D+T NV+  +V GK+  ++   V    +K  ++E
Sbjct:  184 SGEFAPVRMDSWLGDLTFNVVARIVAGKKNFSANGDVGAQRYKAAMDE 231

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.015e-13
Identity = 48/137 (35.04%), Postives = 83/137 (60.58%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVE-QHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            ++++V E  +L+G     D +P LR+LD    EKR+K +S + D  + G + EHR K  +  AN+  D     L  L+D + ++  + I K  +L ++LA  D++++T+ W+++ LLN+ + L KV+ ELD HVG+D
Sbjct:  209 FRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRLKDISGKTDAFLRGLIEEHRTK--KERANTMIDH----LLNLQDSQPEYYTDQIIKGLALAMLLAGTDSSAVTLEWSMSNLLNHPEVLKKVKDELDTHVGQD 339

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.754e-13
Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTIN-KANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            +KN+V E   +AG F + D +P + W+D+ G EK MKK+ K+ D L+     EH  +   NE   + DF+  +++   + E    +  N KA  L L  A  DT+S  + WAL  ++ N     K QQE+D  +GK+
Sbjct:  207 FKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEH--EATSNERKGKPDFLDFIMANRDNSEGERLSITNIKALLLNLFTAGTDTSSSVIEWALTEMMKNPTIFKKAQQEMDQIIGKN 341

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.768e-13
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTIN-KANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            +K++V E   +AG F + D +P L W+D+ G EKRMK++ K+ D L+     EH+    E +   + DF+ V++    + E    +T N KA  L L  A  DT+S  + WALA ++ N   L K Q E+D  +G++
Sbjct:  204 FKDMVVELMTIAGYFNIGDFIPCLAWMDLQGIEKRMKRLHKKFDALLTKMFDEHKATTYERKG--KPDFLDVVMENGDNSEGERLSTTNIKALLLNLFTAGTDTSSSAIEWALAEMMKNPAILKKAQAEMDQVIGRN 338

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C70A2_ARATH (Cytochrome P450 703A2 OS=Arabidopsis thaliana GN=CYP703A2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-12
Identity = 46/136 (33.82%), Postives = 75/136 (55.15%), Query Frame = 2

Query:  155 NLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHRE-KIAENEANSEEDFMGVMLS-KLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            ++ H+ F L G   + D LPF RW+D  G EK M+ V K +D+     + EHR  K+ + + N + DF+ V+LS    + + H  +   KA    ++ AA DT+++T  WA+A  +     + K+Q+ELD  VG +
Sbjct:  209 HITHKLFWLLGVIYLGDYLPFWRWVDPSGCEKEMRDVEKRVDEFHTKIIDEHRRAKLEDEDKNGDMDFVDVLLSLPGENGKAHMEDVEIKALIQDMIAAATDTSAVTNEWAMAEAIKQPRVMRKIQEELDNVVGSN 344

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C81E7_MEDTR (Isoflavone 2'-hydroxylase OS=Medicago truncatula GN=CYP81E7 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.020e-11
Identity = 42/136 (30.88%), Postives = 79/136 (58.09%), Query Frame = 2

Query:  149 WKNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            ++++V E  +L+G     D +P L++LD    EKR+K++ ++ D  + G L+E R K  +   N+  D +   L+      ++  +TI K   L ++LA  D++++T+ W ++ +LN  + L KV+ E+D HVG+D
Sbjct:  209 FRDMVSELLQLSGANNKTDFMPLLKFLDFENLEKRVKRIGEKNDVFLSGLLQEQRSK--KERTNTMIDHL---LNMQESQPEYYTDTIIKGLCLAMLLAGTDSSAVTLEWTMSNILNYPEVLKKVRDEVDTHVGQD 339

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: C7A12_PANGI (Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.616e-11
Identity = 48/142 (33.80%), Postives = 78/142 (54.93%), Query Frame = 2

Query:  152 KNLVHEFFELAGKFVVADALPFLRWLDIGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLS-KLRDVEQHDA------NTINKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQELDIHVGKD 556
            K +++E   LAG+F +AD +PFL  LDI G  ++ K   K LD+++E  + EH +    +  N+  DF+  MLS K +    HD        ++ KA  + ++ AA DT+  ++ W L  L+ +  A+ K Q+E+D  VG D
Sbjct:  200 KGIMNEALTLAGRFNIADFVPFLGPLDIQGLTRQFKDTGKRLDKILEFIIDEHEQN--SSNGNASGDFIDDMLSLKNKPSNTHDELSKVIDRSVIKAIMIDIISAAIDTSDTSIEWILTELIKHPRAMKKCQEEIDAVVGVD 339

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Match: ANGS_PASSA (Angelicin synthase (Fragment) OS=Pastinaca sativa GN=CYP71AJ4 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.532e-11
Identity = 45/154 (29.22%), Postives = 86/154 (55.84%), Query Frame = 2

Query:   92 GNEYQIHTKELKPWNGRIWWKNLVHEFFELAGKFVVADALPFLRWLD-IGGEEKRMKKVSKELDQLVEGWLREHREKIAENEANSEEDFMGVMLSKLRDVEQHDANT-----INKANSLTLVLAAEDTTSITMTWXXXXXXXXXXXXXKVQQEL 535
            G+EY      L    G+++ K L      LA  + + D +P L W+D + G + +++K +KE+D  +EG LR+H + +A N+ ++ +DF+ ++L    ++ + DA +       KA    ++L   +TTS T+ W +A ++ N D + K+Q+E+
Sbjct:  180 GSEY------LSGHKGKLYQKLLAEVTEMLAYTYSIGDFIPLLGWVDWLSGSKAKVEKTAKEVDAFLEGALRDHIKTMASNKGSANDDFLSILL----EIREADAGSTLDEECIKAIVWDMILGGTETTSTTLEWIVAAIIKNPDVMFKLQKEV 323

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2SKX9_GOSRA	1.248e-53	69.12	Uncharacterized protein (Fragment) OS=Gossypium ra...	[more]
A0A061FCL1_THECC	1.056e-51	61.76	Cytochrome P450 OS=Theobroma cacao GN=TCM_033952 P...	[more]
A0A061FJI0_THECC	1.328e-50	62.77	Cytochrome P450 82A3, putative OS=Theobroma cacao ...	[more]
A0A0D2MAG6_GOSRA	9.514e-50	62.77	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2SKW9_GOSRA	1.162e-46	65.98	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2U775_GOSRA	5.889e-46	68.82	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2V421_GOSRA	6.037e-46	68.82	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061FBB3_THECC	4.119e-42	63.38	Cytochrome P450 82A3, putative OS=Theobroma cacao ...	[more]
A0A067L2U8_JATCU	1.307e-41	56.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
V4T3G9_9ROSI	4.913e-41	60.58	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0003209 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
C81E8_MEDTR	3.782e-16	34.56	Cytochrome P450 81E8 OS=Medicago truncatula GN=CYP...	[more]
C82G1_ARATH	7.136e-15	41.46	Cytochrome P450 82G1 OS=Arabidopsis thaliana GN=CY...	[more]
MSH_PAPSO	9.343e-15	35.86	Methyltetrahydroprotoberberine 14-monooxygenase OS...	[more]
C81E1_GLYEC	2.015e-13	35.04	Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ...	[more]
C75A2_SOLME	5.754e-13	34.31	Flavonoid 3',5'-hydroxylase OS=Solanum melongena G...	[more]
C75A1_PETHY	5.768e-13	35.04	Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G...	[more]
C70A2_ARATH	1.837e-12	33.82	Cytochrome P450 703A2 OS=Arabidopsis thaliana GN=C...	[more]
C81E7_MEDTR	1.020e-11	30.88	Isoflavone 2'-hydroxylase OS=Medicago truncatula G...	[more]
C7A12_PANGI	1.616e-11	33.80	Cytochrome P450 CYP736A12 OS=Panax ginseng PE=2 SV...	[more]
ANGS_PASSA	2.532e-11	29.22	Angelicin synthase (Fragment) OS=Pastinaca sativa ...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001128	Cytochrome P450	GENE3D	1.10.630.10		coord: 10..144 e-value: 5.8E-27 score: 93.9
IPR001128	Cytochrome P450	PFAM	PF00067	p450	coord: 12..144 e-value: 2.5E-16 score: 59.3
IPR001128	Cytochrome P450	SUPERFAMILY	48264	Cytochrome P450	coord: 9..144
None	No IPR available	PANTHER	PTHR24298	FAMILY NOT NAMED	coord: 10..145
None	No IPR available	PANTHER	PTHR24298:SF102	SUBFAMILY NOT NAMED	coord: 10..145

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0003209 ID=g.arboreum_cottongen_reftransV1_0003209; Name=g.arboreum_cottongen_reftransV1_0003209; organism=Gossypium arboreum; type=contig; length=557bp
AAGAAAAGTAGTAGCGGTGACAAAGTATTGGTGGAGATGAGGAGATGGTT
CAGAGATGTTACACTTAACGTGATACTAATGATGGTTGTAGGGAAACGAA
TACCAAATTCATACGAAGGAGTTGAAACCGTGGAATGGAAGAATTTGGTG
GAAGAATTTGGTGCACGAATTCTTTGAACTAGCTGGGAAGTTCGTGGTGG
CAGATGCATTGCCGTTTTTGAGATGGTTAGATATTGGTGGAGAAGAGAAG
CGCATGAAGAAGGTATCCAAAGAATTGGACCAACTTGTTGAGGGATGGCT
ACGAGAACACAGGGAAAAGATAGCTGAAAATGAGGCAAATAGTGAGGAAG
ATTTCATGGGAGTGATGCTATCTAAGCTCCGTGATGTTGAGCAACATGAT
GCCAATACCATCAACAAAGCCAACAGTCTCACTCTTGTATTAGCTGCAGA
AGACACGACATCGATTACAATGACATGGGCTTTAGCTTTATTGCTTAATA
ATCGTGATGCATTGAACAAGGTCCAACAAGAATTAGACATCCATGTTGGC
AAGGATA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001128	Cyt_P450

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0020037	heme binding
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process

Search form

g.arboreum_cottongen_reftransV1_0003209, g.arboreum_cottongen_reftransV1_0003209 (contig) Gossypium arboreum

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