g.arboreum_cottongen_reftransV1_0001923, g.arboreum_cottongen_reftransV1_0001923 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A0B2R6I4_GLYSO (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Glycine soja GN=glysoja_008545 PE=3 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.030e-108 Identity = 153/185 (82.70%), Postives = 169/185 (91.35%), Query Frame = -2 Query: 125 KLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD-FEQSLLTEDIFA 676 K+LQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGF+VDDTKLKRAGLDYWPYV+V+IH SW +F+NYF+QQEG+KRLLAFTKRGT IHS+FSYRKGDYLIFGSET GLPP+ LLDCK+E FGGGTI+IPMVETYVRCLNLSVSVGIA+YEASRQLNYE LQVPS + D E+S + EDIFA Sbjct: 76 KILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKIHDSWEDFRNYFRQQEGEKRLLAFTKRGTKIHSEFSYRKGDYLIFGSETSGLPPEALLDCKTEPFGGGTIKIPMVETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESCIDTTEESFIAEDIFA 260
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: C6TCU8_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.876e-108 Identity = 153/185 (82.70%), Postives = 168/185 (90.81%), Query Frame = -2 Query: 125 KLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD-FEQSLLTEDIFA 676 K+LQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGF+VDDTKLKRAGLDYWPYV+V+IH SW +F NYF+QQEG+KRLLAFTKRGT IHS+FSYRKGDYLIFGSET GLPP+ LLDCK+E FGGGTI+IPMVETYVRCLNLSVSVGIA+YEASRQLNYE LQVPS + D E+S + EDIFA Sbjct: 76 KILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKIHDSWEDFHNYFRQQEGEKRLLAFTKRGTKIHSEFSYRKGDYLIFGSETSGLPPEALLDCKTEPFGGGTIKIPMVETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESCIDTTEESFIAEDIFA 260
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A059BJ42_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03394 PE=3 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 1.558e-107 Identity = 151/193 (78.24%), Postives = 173/193 (89.64%), Query Frame = -2 Query: 125 SLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 703 SL P P K LQVVLVSPQIPGN GCIARTCAASA+ LHLVGPLGF+VDDTKLKRAGLDYWPYV+V++H SWAEFQ+YF++Q+G+KRLLAFTKRGT IHSDFSYRKGD+L+FGSET GL +VL DCKSET+GGGT+RIPMVETYVRCLNLSVSVGIA+YEA RQLNYEQL+ S+ + D+EQ+ +TEDIFA Sbjct: 71 SLQGPSPN-KFLQVVLVSPQIPGNTGCIARTCAASAIGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHNSWAEFQDYFRKQDGEKRLLAFTKRGTDIHSDFSYRKGDWLVFGSETSGLSNEVLHDCKSETYGGGTLRIPMVETYVRCLNLSVSVGIALYEACRQLNYEQLRSSSSTANDYEQAFITEDIFA 262
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A059BJA6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03394 PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 2.702e-107 Identity = 151/193 (78.24%), Postives = 173/193 (89.64%), Query Frame = -2 Query: 125 SLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 703 SL P P K LQVVLVSPQIPGN GCIARTCAASA+ LHLVGPLGF+VDDTKLKRAGLDYWPYV+V++H SWAEFQ+YF++Q+G+KRLLAFTKRGT IHSDFSYRKGD+L+FGSET GL +VL DCKSET+GGGT+RIPMVETYVRCLNLSVSVGIA+YEA RQLNYEQL+ S+ + D+EQ+ +TEDIFA Sbjct: 79 SLQGPSPN-KFLQVVLVSPQIPGNTGCIARTCAASAIGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHNSWAEFQDYFRKQDGEKRLLAFTKRGTDIHSDFSYRKGDWLVFGSETSGLSNEVLHDCKSETYGGGTLRIPMVETYVRCLNLSVSVGIALYEACRQLNYEQLRSSSSTANDYEQAFITEDIFA 270
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: V4TQS4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032303mg PE=3 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 4.507e-107 Identity = 150/186 (80.65%), Postives = 165/186 (88.71%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 682 Q K LQVVLVSPQIPGN GCIARTCAASA LHLVGPLGF+VDDTKLKRAGLDYWPYV+V++H +WAEF++YF+QQEG+KRLLAFTKRGT+ HS+ SYRKGDYLIFGSET GLPP+ LLDC SETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEA+RQLNYEQL+ S D E +TEDIFA Sbjct: 102 QNKFLQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEAARQLNYEQLKTASDTCIDREFPFITEDIFA 287
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A067GXF8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024933mg PE=3 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 1.781e-106 Identity = 149/186 (80.11%), Postives = 165/186 (88.71%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 682 Q K LQVVLVSPQIPGN GCIARTCAASA LHLVGPLGF+VDDTKLKRAGLDYWPYV++++H +WAEF++YF+QQEG+KRLLAFTKRGT+ HS+ SYRKGDYLIFGSET GLPP+ LLDC SETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEA+RQLNYEQL+ S D E +TEDIFA Sbjct: 75 QNKFLQVVLVSPQIPGNTGCIARTCAASACGLHLVGPLGFQVDDTKLKRAGLDYWPYVVIKVHSTWAEFRDYFRQQEGEKRLLAFTKRGTSTHSEISYRKGDYLIFGSETSGLPPEALLDCTSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEAARQLNYEQLKTASDTCIDREFPFITEDIFA 260
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A0A0K6L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G428850 PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 6.691e-106 Identity = 148/184 (80.43%), Postives = 167/184 (90.76%), Query Frame = -2 Query: 125 KLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 676 KLLQVVLVSP IPGN G IARTCAASAV LHLVGPLGFKVDDTKLKRAGLDYWPYV+V+IH +WA+FQ YFK+QEG+KRLLAFTKRGT HSDFSY++GDYL+FGSET GLPP+ L DCK++ FGGGT+RIPMVETYVRCLNLSVSVGIA+YEASRQLNYEQLQV S + + EQS++TED+FA Sbjct: 85 KLLQVVLVSPLIPGNTGSIARTCAASAVGLHLVGPLGFKVDDTKLKRAGLDYWPYVVVKIHNTWADFQEYFKKQEGEKRLLAFTKRGTTHHSDFSYKRGDYLLFGSETTGLPPEALEDCKNQPFGGGTLRIPMVETYVRCLNLSVSVGIAIYEASRQLNYEQLQVSSESCTNNEQSIITEDVFA 268
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: D7LTS3_ARALL (tRNA/rRNA methyltransferase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_324780 PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 9.627e-106 Identity = 146/188 (77.66%), Postives = 165/188 (87.77%), Query Frame = -2 Query: 125 DPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 688 D + KLLQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGF+VDD ++KRAGLDYWP+V+VR H SWAEFQ YF+QQEG+KR++AFTKRGT IHSDFSYR GDYL+FGSETCGLPP+ L DCK E +GGGT+RIPMVETYVRCLNLSVSVGIA+YEASRQLNYEQ++ + E+ LLTEDIFA Sbjct: 73 DARSKLLQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDARVKRAGLDYWPFVVVRAHSSWAEFQEYFRQQEGEKRMIAFTKRGTRIHSDFSYRPGDYLLFGSETCGLPPEALSDCKHEPYGGGTLRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQIECAPEGCVNGEEPLLTEDIFA 260
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: G7IWJ3_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g027870 PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.351e-105 Identity = 150/187 (80.21%), Postives = 166/187 (88.77%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDF-EQSLLTEDIFA 682 K+LQVVLVSPQIPGN GCIARTCAASAV LHLVGPLG+KVDDTKLKRAGLDYWPYV+V+IH SW F++YF QQEG+KRLLAFTKRGT IHSDFSYRKGDYL+FG+ET GLPP+ LLDCK+E FGGGTI+IPMVETYVRCLNLSVSVGIA+YEASRQLNYE LQ+PS D E+S +TEDIF Sbjct: 92 HSKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDTKLKRAGLDYWPYVVVKIHDSWEGFRDYFLQQEGEKRLLAFTKRGTKIHSDFSYRKGDYLLFGAETTGLPPEALLDCKTEPFGGGTIKIPMVETYVRCLNLSVSVGIALYEASRQLNYESLQIPSETCIDTEEESFITEDIFG 278
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: I3S4V5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 1.536e-105 Identity = 144/186 (77.42%), Postives = 168/186 (90.32%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 682 ++LQVVLVSPQIPGN GCIARTCAASAV LHLVGPLG+KVDDTKLKRAGLDYWPYV+V+IH SW +F++YF+QQEG+KRLLAFTKRGT IHS+FSY+KGDYL+FG+ET GLPP+ LLDCK++ FGGGT++IPMVETYVRCLNLSVSVGIA+YEASRQLNYEQ Q+PS E++L+TEDI A Sbjct: 74 HSRILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDTKLKRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEKRLLAFTKRGTKIHSEFSYKKGDYLLFGAETTGLPPEALLDCKTKPFGGGTLKIPMVETYVRCLNLSVSVGIALYEASRQLNYEQFQIPSETCIPTEETLITEDILA 259
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_YERPE (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Yersinia pestis GN=trmL PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.258e-34 Identity = 70/160 (43.75%), Postives = 92/160 (57.50%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGD-KRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 +L +VL P+IP N G I R CA + LHL+ PLGF DD +L+RAGLDY + ++ H + F + K RL A T +GT HS SY+ DYL+FG ET GLP +L ++ IRIPM + R +NLS +V + VYEA RQL Y Sbjct: 1 MLNIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHHHDYQAFLDSEKLDSTQPARLFALTTKGTPAHSAVSYQANDYLLFGPETRGLPAYILDALPAQQ----KIRIPM-QADSRSMNLSNAVSVVVYEAWRQLGY 155
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_BURP0 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=trmL PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 7.673e-34 Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = -2 Query: 194 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYE 673 + VVLV P+IP N G + R CA + LHL+ PLGF +DD K++RAGLDY Y +R+H W F + R+ AFT RG+ D ++ GD+ +FG+ET GL P ++ E +R+PM R LNLS +V + V+EA RQ +E Sbjct: 1 MFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVA--AEAPDPARMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQ----RVRLPM-RPGNRSLNLSNTVAVVVFEAWRQAGFE 153
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LISMF (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_0956 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.881e-33 Identity = 75/175 (42.86%), Postives = 98/175 (56.00%), Query Frame = -2 Query: 155 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY-EQLQVPSTNSGDFE 667 +VL P+IP N G I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + S EF F++ EG + TK G ++SD Y K + +FG ET GL PD LL E +RIPM + ++R LNLS + I YEA RQ N+ LQ P+ + F+ Sbjct: 4 HIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNEGGE-FYYITKFGRHVYSDIDYSDPNKDYFFVFGKETTGL-PDALLQKNEE----NCLRIPMTD-HIRSLNLSNTAAILAYEALRQQNFGALLQEPNYDRKIFQ 168
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_STRPM (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=M28_Spy0301 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.567e-33 Identity = 67/171 (39.18%), Postives = 96/171 (56.14%), Query Frame = -2 Query: 161 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGD--YLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD 667 +VL PQIP N G IARTCAA+ LH++ P+GF +DD K+KRAGLDYW + + + +F N Q G L+ +K +S +Y GD Y +FG E GLP D + + +RIPM + +VR LN+S +V + +YEA RQ ++ L++ T D Sbjct: 19 HIVLFQPQIPQNTGNIARTCAATNAPLHIIKPMGFPIDDRKMKRAGLDYWDKLELHFYDHLEQFIN---QCHGQLHLI--SKFAVNNYSQATYADGDSHYFLFGREDTGLPEDFMRE-----HAEKALRIPMNDEHVRSLNVSNTVCMVIYEALRQQGFQGLELKHTYEHD 179
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LISIN (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0934 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.922e-31 Identity = 72/175 (41.14%), Postives = 97/175 (55.43%), Query Frame = -2 Query: 155 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY-EQLQVPSTNSGDFE 667 +VL P+IP N G I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + S EF F++ G + TK G ++SD Y K + +FG ET GL PD LL E +RIPM + ++R LNLS + + YEA RQ ++ LQ P+ + F+ Sbjct: 4 HIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNAGGE-FYYITKFGRHVYSDVDYSDPNKNYFFVFGKETTGL-PDELLQANEE----NCLRIPMTD-HIRSLNLSNTAAVLAYEALRQQSFGALLQEPNYDRKIFK 168
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_SHEPW (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=trmL PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.134e-31 Identity = 65/159 (40.88%), Postives = 96/159 (60.38%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + + L P+I N G I R A + LHL+ PLGF ++D KL+RAGLDY V H + F+++ K +G KR++A T +G+ HS+ ++++ D L+FG E+ GLP D++ +E +RIPM+ T R LNLS +V I YEA RQL+Y Sbjct: 1 MFHIALYEPEIAPNTGNIIRLIANNGCQLHLIEPLGFDLEDKKLRRAGLDYADLANVSHHKN---FESFLKAMQG-KRIMACTTKGSRPHSELTFQQDDVLLFGPESRGLPADIIDSIPTEQ----RLRIPMMST-SRSLNLSNAVAIISYEAWRQLDY 150
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_METGS (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Methylovorus glucosetrophus (strain SIP3-4) GN=trmL PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.643e-31 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + +VL P+IP N G I R CA + LHLV PLGF ++D +LKRAGLDY Y +++H +W +R+ A T +G+A HS ++++GD +FG ET GLP ++ + + +R+PM+ R LNLS S + +YEA RQ ++ Sbjct: 1 MFDIVLYQPEIPPNTGNIIRLCANTGTRLHLVKPLGFSLEDKQLKRAGLDYHEYANMQVHENWEACCAAL----AGRRMFALTTKGSARHSTIAFQEGDVFVFGPETRGLPEEI----RDQFTPEHRVRLPMMPNN-RSLNLSNSAAVLLYEAWRQHDF 150
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LACLM (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=llmg_1343 PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.575e-31 Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = -2 Query: 161 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD 667 + L P+I N G IARTCAA+ LHL+ P GF++ D LKRAGLDYW V + H + +F N +L +K ++SD Y +K Y +FG E GLP + + + + E IRIPM + +VR LNLS + VYEA +Q + L++ T D Sbjct: 3 HIALFEPRIHFNTGNIARTCAATNTVLHLIEPFGFEISDKHLKRAGLDYWDKVNIVYHKNLQDFMNSIADG---GQLYLVSKFAEHVYSDVDYSDDKKDHYFLFGREDTGLPEEFMHEHRDE-----CIRIPMNDEHVRSLNLSNCACMIVYEALKQQEFRGLELVHTYEKD 166
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_ACISJ (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Acidovorax sp. (strain JS42) GN=trmL PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.578e-30 Identity = 64/160 (40.00%), Postives = 88/160 (55.00%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGT-IRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + +VLV P+IP N G + R A + LHLV PLGF ++D ++RAGLDY Y VR H W Q R+ A T GT D + GD+ +FG+E+ GLPP++ ETF +R+PM+ R LNLS +V + VYEA RQ ++ Sbjct: 1 MFHIVLVEPEIPPNTGNVIRLAANTGCMLHLVEPLGFSMEDPLMRRAGLDYHEYAEVRRHPGWTALLR--DMQPDLSRMFALTTHGTQSVYDTGFLPGDWFVFGAESRGLPPEL-----RETFPPAQRLRLPMLPNQ-RSLNLSNAVAVTVYEAWRQNSF 152
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_POLSJ (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trmL PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 8.287e-30 Identity = 67/168 (39.88%), Postives = 90/168 (53.57%), Query Frame = -2 Query: 173 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFG-GGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPST 673 + +VLV P+IP N G + R A + LHLV PLGF +DD ++RAGLDY Y V H SW + Q+ RL A T G D + GD+L+FG+ET GL PDV E+F +R+PM + R LNLS +V + V+EA RQ + P+ Sbjct: 1 MFNIVLVEPEIPPNTGNVIRLAANTGCRLHLVEPLGFSMDDKHMRRAGLDYHEYAQVLRHASWQALLD--SQRPPAGRLFAMTTHGAGSVYDMRFLPGDWLVFGAETRGLAPDV-----RESFPMAQRLRVPM-QPGQRSLNLSNTVAVTVFEAWRQNGFAGSHHPAA 160 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001923 ID=g.arboreum_cottongen_reftransV1_0001923; Name=g.arboreum_cottongen_reftransV1_0001923; organism=Gossypium arboreum; type=contig; length=749bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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