g.arboreum_cottongen_reftransV1_0001923, g.arboreum_cottongen_reftransV1_0001923 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A0D2QZE7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G174000 PE=3 SV=1) HSP 1 Score: 435.647 bits (1119), Expect = 8.173e-152 Identity = 206/208 (99.04%), Postives = 208/208 (100.00%), Query Frame = -2 Query: 125 DTHTKTKIETGNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 748 DTHTKTKIETGNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYV+VR+HGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA Sbjct: 50 DTHTKTKIETGNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVVVRVHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 257
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A0D2S1C5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G174000 PE=3 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 2.350e-146 Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = -2 Query: 125 DTHTKTKIETGNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 748 DTHTKTK NGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYV+VR+HGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA Sbjct: 50 DTHTKTK---RNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVVVRVHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 254
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A0B0NQK7_GOSAR (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Gossypium arboreum GN=F383_16703 PE=3 SV=1) HSP 1 Score: 406.371 bits (1043), Expect = 2.303e-140 Identity = 199/208 (95.67%), Postives = 199/208 (95.67%), Query Frame = -2 Query: 125 DTHTKTKIETGNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 748 DTHTKTK NGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWP IHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA Sbjct: 50 DTHTKTK---RNGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWP-----IHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 249
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A061DXE7_THECC (AGAMOUS-like 26 isoform 1 OS=Theobroma cacao GN=TCM_005921 PE=3 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 1.162e-121 Identity = 176/207 (85.02%), Postives = 184/207 (88.89%), Query Frame = -2 Query: 125 ETGNGNNSLP-------APDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 724 ETGNGN SLP + Q KLLQVVLVSPQIPGN GCIARTCAASAV +HLVGPLGFKVDDTKLKRAGLDYWPYV+VR+H SW EFQ+YFKQQEG KRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPD+LLDCKSETFGGGTIRIPMV+TYVRCLNLSVSVGIA+YEASRQLNYEQLQ PS N D EQS LTEDIFA Sbjct: 61 ETGNGN-SLPGGIGKAVSQLSQNKLLQVVLVSPQIPGNVGCIARTCAASAVGVHLVGPLGFKVDDTKLKRAGLDYWPYVVVRVHHSWTEFQDYFKQQEGKKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDILLDCKSETFGGGTIRIPMVDTYVRCLNLSVSVGIALYEASRQLNYEQLQGPSGNCSDTEQSFLTEDIFA 266
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A061DWH2_THECC (AGAMOUS-like 26 isoform 2 OS=Theobroma cacao GN=TCM_005921 PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 9.023e-112 Identity = 156/174 (89.66%), Postives = 163/174 (93.68%), Query Frame = -2 Query: 125 QIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 646 QIPGN GCIARTCAASAV +HLVGPLGFKVDDTKLKRAGLDYWPYV+VR+H SW EFQ+YFKQQEG KRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPD+LLDCKSETFGGGTIRIPMV+TYVRCLNLSVSVGIA+YEASRQLNYEQLQ PS N D EQS LTEDIFA Sbjct: 21 QIPGNVGCIARTCAASAVGVHLVGPLGFKVDDTKLKRAGLDYWPYVVVRVHHSWTEFQDYFKQQEGKKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDILLDCKSETFGGGTIRIPMVDTYVRCLNLSVSVGIALYEASRQLNYEQLQGPSGNCSDTEQSFLTEDIFA 194
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: M5XKD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010708mg PE=3 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.201e-111 Identity = 153/186 (82.26%), Postives = 171/186 (91.94%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 682 + K+LQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGFKVDD KLKRAGLDYWPYV+V++H SWAEFQ+YF+QQ+G+KRLLAFTKRGT+ HSDFSYR+GD+LIFGSET GLPP+VL DC SETFGGGTIRIPMVETYVRCLNLSVSVGIA+YEASRQL+YEQLQ P+ N D EQS ++EDIFA Sbjct: 54 RNKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFKVDDAKLKRAGLDYWPYVVVKVHSSWAEFQDYFRQQDGEKRLLAFTKRGTSFHSDFSYRRGDFLIFGSETSGLPPEVLQDCNSETFGGGTIRIPMVETYVRCLNLSVSVGIALYEASRQLSYEQLQFPNENCIDHEQSFVSEDIFA 239
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: A0A067L4Q0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16733 PE=3 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 3.086e-111 Identity = 160/207 (77.29%), Postives = 179/207 (86.47%), Query Frame = -2 Query: 125 ETGNGNNSLP-------APDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 724 E GNGN SLP + + KLLQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGF+VDDTKLKRAGLDYWPYV+V++H SWAEF++YF+QQEGDKRLLAFTKRG A HS+FSYRKGDYL+FGSET GLPP+ LLDC++E+ GGGTIRIPMVETYVRCLNLSVSVGIA+YEASRQLNYEQL+ PS D E+S +TEDIFA Sbjct: 57 ERGNGN-SLPHGIGEAVSEVSRNKLLQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDTKLKRAGLDYWPYVVVKVHDSWAEFRDYFRQQEGDKRLLAFTKRGKATHSEFSYRKGDYLLFGSETRGLPPEALLDCENESIGGGTIRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQLKFPSETCIDNEKSFITEDIFA 262
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: B9HNL8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s06890g PE=3 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.116e-109 Identity = 162/212 (76.42%), Postives = 178/212 (83.96%), Query Frame = -2 Query: 125 ETGNGN-NSLP--------APDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPS---TNSGDFEQSLLTEDIFA 724 ++G GN NSLP +KLLQVVLVSPQIPGN GCIARTCAA++V LHLVGPLGF+VDD KLKRAGLDYWPYV+V++H SWAEFQ+YF+QQEGDKRLLAFTKRGT HS+FSYRKGDYL+FGSET GLPP+ LLDCKSE FGGG IRIPMVETYVRCLNLSVSVGIA+YEASRQLNYEQLQ PS N G EQS +TEDIFA Sbjct: 55 QSGRGNGNSLPDGVGKGVNEVSRNKKLLQVVLVSPQIPGNTGCIARTCAATSVGLHLVGPLGFQVDDAKLKRAGLDYWPYVVVKVHDSWAEFQDYFRQQEGDKRLLAFTKRGTTTHSEFSYRKGDYLVFGSETSGLPPEALLDCKSEMFGGGMIRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSEDFVNGG--EQSFITEDIFA 264
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: B9RHG3_RICCO (23S rRNA methyltransferase, putative OS=Ricinus communis GN=RCOM_1525400 PE=3 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 5.756e-109 Identity = 152/186 (81.72%), Postives = 167/186 (89.78%), Query Frame = -2 Query: 125 QQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 682 + KLLQVVLVSPQIPGN GCIARTCAASAV LHLVGPLGF+VD TKLKRAGLDYWPYV+V++H SW EFQ+YF+QQEGDKRLLAFTKRGTA HS+F YRKGDYLIFGSET GLPP+ L DCK+E FGGGTIRIPM+ETYVRCLNLSVSVGIA+YEASRQLNYEQL+ PS + D EQS + EDIFA Sbjct: 49 RNKLLQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDSTKLKRAGLDYWPYVVVKVHESWTEFQDYFRQQEGDKRLLAFTKRGTATHSEFLYRKGDYLIFGSETSGLPPEALQDCKNEPFGGGTIRIPMIETYVRCLNLSVSVGIALYEASRQLNYEQLKFPSESWTDNEQSFIIEDIFA 234
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Match: D7T2X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01270 PE=3 SV=1) HSP 1 Score: 326.25 bits (835), Expect = 6.984e-109 Identity = 155/197 (78.68%), Postives = 168/197 (85.28%), Query Frame = -2 Query: 125 NGNNSLPAPDPQQKLLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGDFEQSLLTEDIFA 715 NG A +LLQVVLVSPQIPGN G IARTCAASAV LHL+ PLGF+VDD KLKRAGLDYWPYV+V++H SWAEF+ YF+QQEG+KRLLAFTKRGT IHSDFSYRKGD+LIFGSETCGLPP+ LLDCKSE GGGTIRIPMVETYVRCLNLSVSVGIA+YEASRQLNYEQLQ PS D +S LTEDIFA Sbjct: 54 NGAGERVAEISNNRLLQVVLVSPQIPGNTGTIARTCAASAVGLHLIEPLGFQVDDAKLKRAGLDYWPYVVVKVHDSWAEFREYFRQQEGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCGLPPEALLDCKSEALGGGTIRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPPTDSSKSFLTEDIFA 250
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_YERPE (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Yersinia pestis GN=trmL PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.258e-34 Identity = 70/160 (43.75%), Postives = 92/160 (57.50%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGD-KRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 +L +VL P+IP N G I R CA + LHL+ PLGF DD +L+RAGLDY + ++ H + F + K RL A T +GT HS SY+ DYL+FG ET GLP +L ++ IRIPM + R +NLS +V + VYEA RQL Y Sbjct: 1 MLNIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHHHDYQAFLDSEKLDSTQPARLFALTTKGTPAHSAVSYQANDYLLFGPETRGLPAYILDALPAQQ----KIRIPM-QADSRSMNLSNAVSVVVYEAWRQLGY 155
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_BURP0 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=trmL PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 7.673e-34 Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = -2 Query: 194 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYE 673 + VVLV P+IP N G + R CA + LHL+ PLGF +DD K++RAGLDY Y +R+H W F + R+ AFT RG+ D ++ GD+ +FG+ET GL P ++ E +R+PM R LNLS +V + V+EA RQ +E Sbjct: 1 MFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVA--AEAPDPARMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQ----RVRLPM-RPGNRSLNLSNTVAVVVFEAWRQAGFE 153
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LISMF (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_0956 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.881e-33 Identity = 75/175 (42.86%), Postives = 98/175 (56.00%), Query Frame = -2 Query: 155 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY-EQLQVPSTNSGDFE 667 +VL P+IP N G I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + S EF F++ EG + TK G ++SD Y K + +FG ET GL PD LL E +RIPM + ++R LNLS + I YEA RQ N+ LQ P+ + F+ Sbjct: 4 HIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNEGGE-FYYITKFGRHVYSDIDYSDPNKDYFFVFGKETTGL-PDALLQKNEE----NCLRIPMTD-HIRSLNLSNTAAILAYEALRQQNFGALLQEPNYDRKIFQ 168
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_STRPM (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Streptococcus pyogenes serotype M28 (strain MGAS6180) GN=M28_Spy0301 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.567e-33 Identity = 67/171 (39.18%), Postives = 96/171 (56.14%), Query Frame = -2 Query: 161 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGD--YLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD 667 +VL PQIP N G IARTCAA+ LH++ P+GF +DD K+KRAGLDYW + + + +F N Q G L+ +K +S +Y GD Y +FG E GLP D + + +RIPM + +VR LN+S +V + +YEA RQ ++ L++ T D Sbjct: 19 HIVLFQPQIPQNTGNIARTCAATNAPLHIIKPMGFPIDDRKMKRAGLDYWDKLELHFYDHLEQFIN---QCHGQLHLI--SKFAVNNYSQATYADGDSHYFLFGREDTGLPEDFMRE-----HAEKALRIPMNDEHVRSLNVSNTVCMVIYEALRQQGFQGLELKHTYEHD 179
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LISIN (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0934 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.922e-31 Identity = 72/175 (41.14%), Postives = 97/175 (55.43%), Query Frame = -2 Query: 155 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY-EQLQVPSTNSGDFE 667 +VL P+IP N G I+RTCA + LHL+ PLGF DD LKRAGLDYW V + + S EF F++ G + TK G ++SD Y K + +FG ET GL PD LL E +RIPM + ++R LNLS + + YEA RQ ++ LQ P+ + F+ Sbjct: 4 HIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEF---FEKNAGGE-FYYITKFGRHVYSDVDYSDPNKNYFFVFGKETTGL-PDELLQANEE----NCLRIPMTD-HIRSLNLSNTAAVLAYEALRQQSFGALLQEPNYDRKIFK 168
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_SHEPW (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=trmL PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.134e-31 Identity = 65/159 (40.88%), Postives = 96/159 (60.38%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + + L P+I N G I R A + LHL+ PLGF ++D KL+RAGLDY V H + F+++ K +G KR++A T +G+ HS+ ++++ D L+FG E+ GLP D++ +E +RIPM+ T R LNLS +V I YEA RQL+Y Sbjct: 1 MFHIALYEPEIAPNTGNIIRLIANNGCQLHLIEPLGFDLEDKKLRRAGLDYADLANVSHHKN---FESFLKAMQG-KRIMACTTKGSRPHSELTFQQDDVLLFGPESRGLPADIIDSIPTEQ----RLRIPMMST-SRSLNLSNAVAIISYEAWRQLDY 150
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_METGS (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Methylovorus glucosetrophus (strain SIP3-4) GN=trmL PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.643e-31 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + +VL P+IP N G I R CA + LHLV PLGF ++D +LKRAGLDY Y +++H +W +R+ A T +G+A HS ++++GD +FG ET GLP ++ + + +R+PM+ R LNLS S + +YEA RQ ++ Sbjct: 1 MFDIVLYQPEIPPNTGNIIRLCANTGTRLHLVKPLGFSLEDKQLKRAGLDYHEYANMQVHENWEACCAAL----AGRRMFALTTKGSARHSTIAFQEGDVFVFGPETRGLPEEI----RDQFTPEHRVRLPMMPNN-RSLNLSNSAAVLLYEAWRQHDF 150
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_LACLM (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=llmg_1343 PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 7.575e-31 Identity = 65/172 (37.79%), Postives = 91/172 (52.91%), Query Frame = -2 Query: 161 QVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSY---RKGDYLIFGSETCGLPPDVLLDCKSETFGGGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPSTNSGD 667 + L P+I N G IARTCAA+ LHL+ P GF++ D LKRAGLDYW V + H + +F N +L +K ++SD Y +K Y +FG E GLP + + + + E IRIPM + +VR LNLS + VYEA +Q + L++ T D Sbjct: 3 HIALFEPRIHFNTGNIARTCAATNTVLHLIEPFGFEISDKHLKRAGLDYWDKVNIVYHKNLQDFMNSIADG---GQLYLVSKFAEHVYSDVDYSDDKKDHYFLFGREDTGLPEEFMHEHRDE-----CIRIPMNDEHVRSLNLSNCACMIVYEALKQQEFRGLELVHTYEKD 166
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_ACISJ (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Acidovorax sp. (strain JS42) GN=trmL PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.578e-30 Identity = 64/160 (40.00%), Postives = 88/160 (55.00%), Query Frame = -2 Query: 197 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFGGGT-IRIPMVETYVRCLNLSVSVGIAVYEASRQLNY 673 + +VLV P+IP N G + R A + LHLV PLGF ++D ++RAGLDY Y VR H W Q R+ A T GT D + GD+ +FG+E+ GLPP++ ETF +R+PM+ R LNLS +V + VYEA RQ ++ Sbjct: 1 MFHIVLVEPEIPPNTGNVIRLAANTGCMLHLVEPLGFSMEDPLMRRAGLDYHEYAEVRRHPGWTALLR--DMQPDLSRMFALTTHGTQSVYDTGFLPGDWFVFGAESRGLPPEL-----RETFPPAQRLRLPMLPNQ-RSLNLSNAVAVTVYEAWRQNSF 152
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Match: TRML_POLSJ (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trmL PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 8.287e-30 Identity = 67/168 (39.88%), Postives = 90/168 (53.57%), Query Frame = -2 Query: 173 LLQVVLVSPQIPGNAGCIARTCAASAVALHLVGPLGFKVDDTKLKRAGLDYWPYVIVRIHGSWAEFQNYFKQQEGDKRLLAFTKRGTAIHSDFSYRKGDYLIFGSETCGLPPDVLLDCKSETFG-GGTIRIPMVETYVRCLNLSVSVGIAVYEASRQLNYEQLQVPST 673 + +VLV P+IP N G + R A + LHLV PLGF +DD ++RAGLDY Y V H SW + Q+ RL A T G D + GD+L+FG+ET GL PDV E+F +R+PM + R LNLS +V + V+EA RQ + P+ Sbjct: 1 MFNIVLVEPEIPPNTGNVIRLAANTGCRLHLVEPLGFSMDDKHMRRAGLDYHEYAQVLRHASWQALLD--SQRPPAGRLFAMTTHGAGSVYDMRFLPGDWLVFGAETRGLAPDV-----RESFPMAQRLRVPM-QPGQRSLNLSNTVAVTVFEAWRQNGFAGSHHPAA 160 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0001923 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0001923 ID=g.arboreum_cottongen_reftransV1_0001923; Name=g.arboreum_cottongen_reftransV1_0001923; organism=Gossypium arboreum; type=contig; length=749bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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