g.arboreum_cottongen_reftransV1_0009878, g.arboreum_cottongen_reftransV1_0009878 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A0D2V0U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G024100 PE=4 SV=1) HSP 1 Score: 699.123 bits (1803), Expect = 0.000e+0 Identity = 358/359 (99.72%), Postives = 359/359 (100.00%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQGGSEYLLQ 1078 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVRLPRPLSRELPLRPYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTK+FLRVLLSTIEQGKEQGGSEYLLQ Sbjct: 3123 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVRLPRPLSRELPLRPYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKHFLRVLLSTIEQGKEQGGSEYLLQ 3481
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A0D2VUJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G024100 PE=4 SV=1) HSP 1 Score: 698.738 bits (1802), Expect = 0.000e+0 Identity = 358/359 (99.72%), Postives = 359/359 (100.00%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQGGSEYLLQ 1078 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVRLPRPLSRELPLRPYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTK+FLRVLLSTIEQGKEQGGSEYLLQ Sbjct: 3123 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVRLPRPLSRELPLRPYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKHFLRVLLSTIEQGKEQGGSEYLLQ 3481
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A061DJI1_THECC (Vacuolar protein sorting-associated protein 13A, putative OS=Theobroma cacao GN=TCM_001701 PE=4 SV=1) HSP 1 Score: 624.78 bits (1610), Expect = 0.000e+0 Identity = 323/359 (89.97%), Postives = 337/359 (93.87%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQGGSEYLLQ 1078 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFD+QAVARME+QLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTG+TAQSIRNRSR+Y MGSQ+ RVR PRPLSRELPLRPYSWEEAVGISVL EADDGKLKDEVYVM KAL+ PGK+VI+TERLVLVVNCPSLVD KPEFRGVA + EWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQ QQ+SRK GGGT+ RWNNPSTPLPLFQTNLE+ SE D ++FL VLLSTIEQGKE GG YLL Sbjct: 3144 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDDQAVARMEKQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGRTAQSIRNRSRVYHMGSQQYRVRFPRPLSRELPLRPYSWEEAVGISVLTEADDGKLKDEVYVMCKALRKPGKFVIVTERLVLVVNCPSLVDFEKPEFRGVAVDPEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQKQQLSRK--GGGTRKRWNNPSTPLPLFQTNLEVASEGDAEDFLLVLLSTIEQGKEHGGRGYLLH 3500
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A067EG91_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0000281mg PE=4 SV=1) HSP 1 Score: 536.184 bits (1380), Expect = 3.552e-168 Identity = 280/361 (77.56%), Postives = 315/361 (87.26%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQG-GSEYLLQ 1078 MYKVFGSAGVIGNPMGFARSLG+GIRDFL+VPA+S+L+SPTGLI+GMA GTTSL+SNTVYALSDAATQFS AAHKGIVAFTFD+Q+VARME+Q KG ASHSKG+INEV EGLTGLLQSP+KEAEKHGLPG+LSGIA GVTGLV RPAASILEVTGKTAQSIRNRSRL++ SQR RVRLPRPLSRELPL PYSWEEA+G +VL E DDG K KDEV VM KALK GK+ ++TERL+L+V+C SLVDLGKPEF+GVAA+ +WV+E+EISL S+IH D D+G VHIVGSSSD L RQNQ S++G G TK WNNPSTPLPLFQTNLEL SEED K + VLL TIE+GK +G GS YLL Sbjct: 2585 MYKVFGSAGVIGNPMGFARSLGLGIRDFLSVPARSMLQSPTGLISGMALGTTSLVSNTVYALSDAATQFSNAAHKGIVAFTFDDQSVARMEKQQKGVASHSKGVINEVLEGLTGLLQSPIKEAEKHGLPGLLSGIAFGVTGLVARPAASILEVTGKTAQSIRNRSRLHRTRSQRYRVRLPRPLSRELPLAPYSWEEAIGTTVLMEVDDGLKYKDEVPVMCKALKQAGKFAVITERLILIVSCSSLVDLGKPEFQGVAADPDWVVESEISLDSIIHADTDEGTVHIVGSSSDGLSRQNQHQSKRGSGTRTKW-WNNPSTPLPLFQTNLELTSEEDAKELVHVLLDTIERGKGRGWGSGYLLH 2944
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A067E8M4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0000281mg PE=4 SV=1) HSP 1 Score: 536.184 bits (1380), Expect = 4.550e-168 Identity = 280/361 (77.56%), Postives = 315/361 (87.26%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQG-GSEYLLQ 1078 MYKVFGSAGVIGNPMGFARSLG+GIRDFL+VPA+S+L+SPTGLI+GMA GTTSL+SNTVYALSDAATQFS AAHKGIVAFTFD+Q+VARME+Q KG ASHSKG+INEV EGLTGLLQSP+KEAEKHGLPG+LSGIA GVTGLV RPAASILEVTGKTAQSIRNRSRL++ SQR RVRLPRPLSRELPL PYSWEEA+G +VL E DDG K KDEV VM KALK GK+ ++TERL+L+V+C SLVDLGKPEF+GVAA+ +WV+E+EISL S+IH D D+G VHIVGSSSD L RQNQ S++G G TK WNNPSTPLPLFQTNLEL SEED K + VLL TIE+GK +G GS YLL Sbjct: 2663 MYKVFGSAGVIGNPMGFARSLGLGIRDFLSVPARSMLQSPTGLISGMALGTTSLVSNTVYALSDAATQFSNAAHKGIVAFTFDDQSVARMEKQQKGVASHSKGVINEVLEGLTGLLQSPIKEAEKHGLPGLLSGIAFGVTGLVARPAASILEVTGKTAQSIRNRSRLHRTRSQRYRVRLPRPLSRELPLAPYSWEEAIGTTVLMEVDDGLKYKDEVPVMCKALKQAGKFAVITERLILIVSCSSLVDLGKPEFQGVAADPDWVVESEISLDSIIHADTDEGTVHIVGSSSDGLSRQNQHQSKRGSGTRTKW-WNNPSTPLPLFQTNLELTSEEDAKELVHVLLDTIERGKGRGWGSGYLLH 3022
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: V4SQR3_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100108862mg PE=4 SV=1) HSP 1 Score: 523.857 bits (1348), Expect = 8.004e-164 Identity = 270/347 (77.81%), Postives = 305/347 (87.90%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIE 1039 MYKVFGSAGVIGNPMGFARSLG+GIRDFL+VPA+S+L+SPTGLI+GMA GTTSL+SNTVYALSDAATQFS AAHKGIVAFTFD+Q+VARME+Q KG ASHSKG+INE+ EGLTGLLQSP+KEAEKHGLPG+LSGIA GVTGLV RPAASILEVTGKTAQSIRNRSRL++ SQ+ RVRLPRPLSRELPL PYSWEEA+G +VL E DDG K KDEV VM KALK GK+ ++TERL+L+V+C SLVDLGKPEF+GVAA+ +WV+E+EISL S+IH D D+G VHIVGSSSD L RQNQ S++G G TK WNNPSTPLPLFQTNLEL SEED K + VLL TIE Sbjct: 2565 MYKVFGSAGVIGNPMGFARSLGLGIRDFLSVPARSMLQSPTGLISGMALGTTSLVSNTVYALSDAATQFSNAAHKGIVAFTFDDQSVARMEKQQKGVASHSKGVINEILEGLTGLLQSPIKEAEKHGLPGLLSGIAFGVTGLVARPAASILEVTGKTAQSIRNRSRLHRTRSQQYRVRLPRPLSRELPLAPYSWEEAIGTTVLMEVDDGLKYKDEVPVMCKALKQAGKFAVITERLILIVSCSSLVDLGKPEFQGVAADPDWVVESEISLDSIIHADTDEGTVHIVGSSSDGLSRQNQHQSKRGSGTRTKW-WNNPSTPLPLFQTNLELTSEEDAKELVHVLLDTIE 2910
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: M5XBH4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000018mg PE=4 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 2.660e-159 Identity = 272/361 (75.35%), Postives = 306/361 (84.76%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQG-GSEYLLQ 1078 MYKVFGSAGVIGNPMGFARS+G+GIRDFL+VPA+SI SPTGLITGMAQGTTSLLSNTVYA+SDAATQFSKAAHKGIVAFTFD+QAV+ +E+Q G A+HSKG+IN VFEGLTGLLQSP+K AE+HGLPG+LSGIALG+TGLV +PAASILEVTGKTAQSIRNRSR YQMG QR RVRLPRPLSRELPLRPY+WEEAVG S L EADD +LKDE+ VM K L+ GK+VI+T RLVL+V+C SL+DLGKPEFRGV A+ EWVIE+E+ L SVIH D D GVVHIVGSSS+ LRQNQQ R G G RWNNP+ +PL QTNLEL +ED +N L+ LLSTIE GKEQG G YLL Sbjct: 2227 MYKVFGSAGVIGNPMGFARSMGLGIRDFLSVPARSIFLSPTGLITGMAQGTTSLLSNTVYAISDAATQFSKAAHKGIVAFTFDDQAVSGVEQQQIGVATHSKGVINGVFEGLTGLLQSPIKGAERHGLPGVLSGIALGITGLVAKPAASILEVTGKTAQSIRNRSRFYQMGQQRFRVRLPRPLSRELPLRPYTWEEAVGASALVEADDSFRLKDEILVMCKELRQAGKFVIITHRLVLIVSCSSLLDLGKPEFRGVPADLEWVIESEVRLESVIHADCDQGVVHIVGSSSNIPLRQNQQAKRSSGTGAG--RWNNPT--VPLIQTNLELAHQEDAENLLQNLLSTIELGKEQGWGCRYLLH 2583
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: A0A067KXR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02743 PE=4 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 5.907e-159 Identity = 273/362 (75.41%), Postives = 312/362 (86.19%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMR-WNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQG-GSEYLLQ 1078 MYKVF SAGVIGNPMGFARSLG+GIRDFL+VPA+S L+SPTGLITGMAQGT SLLSNTVYALSDA TQFSKAAHKGIVAFTFD+Q V+ M+RQ KG ASHSKG+INEV EGLTGLLQSP+KEAEKHGLPG+LSGIALGVT LV RPAASILE+TGKTAQSIRN+S+LYQ+GSQR R+R PRPLSRELPLRPYS EEAVG SVL EA+DG KLKDEV VM K+LK GK+V++TERL+L++ CP LVD+GKPEFRGV + EW IE+EI L SVIH D + VHIVGSSSDA LRQNQ S+KGGGGGT+ + W++PST LPLFQTNLE S +D ++ L+ +LSTIEQGK +G GS YL+ Sbjct: 1245 MYKVFVSAGVIGNPMGFARSLGLGIRDFLSVPARSFLQSPTGLITGMAQGTASLLSNTVYALSDATTQFSKAAHKGIVAFTFDDQFVSTMQRQQKGVASHSKGVINEVLEGLTGLLQSPIKEAEKHGLPGVLSGIALGVTRLVARPAASILEITGKTAQSIRNKSKLYQIGSQRRRIRFPRPLSRELPLRPYSLEEAVGTSVLMEAEDGLKLKDEVLVMCKSLKQAGKFVVVTERLMLIIKCPGLVDMGKPEFRGVPVDPEWFIESEIGLDSVIHADNVEAWVHIVGSSSDARLRQNQHQSKKGGGGGTRTKQWSDPSTRLPLFQTNLEFASTKDAEDLLQTMLSTIEQGKGRGWGSGYLVH 1606
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: W9QCI9_9ROSA (Putative vacuolar protein sorting-associated protein 13C OS=Morus notabilis GN=L484_010461 PE=4 SV=1) HSP 1 Score: 508.064 bits (1307), Expect = 4.512e-158 Identity = 269/361 (74.52%), Postives = 304/361 (84.21%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRWNNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQG-GSEYLLQ 1078 MYKVFGSAGVIGNPMGFAR+LG+GIRDFL+VPA++I +SPTGLITGMAQGTTSLL NTVYA+SDAATQFSKAAHKGIVAFTFD+QAV+ ME+ G ASHSKG+INEV EGLTGLLQSP+K AEKHGLPG+LSGIALGVTGLV +PAASIL+VTGKTAQSIRNRSRLYQM QR RVR PRPLSRE PLRPYSWEEA+G SVL EA DG KLKDEV V KALK GK+V++TERL+L+V+C LVDLGKPEFRG+ A+ EWV+E+EI L +V+H D+ GVVHIVGSSSD L RQNQ R GG GT +RWN+P+ LPL QTNLELE ED +N L +L S IE+GK QG G YLL Sbjct: 2947 MYKVFGSAGVIGNPMGFARTLGLGIRDFLSVPARTIFQSPTGLITGMAQGTTSLLRNTVYAVSDAATQFSKAAHKGIVAFTFDDQAVSGMEQLQTGVASHSKGVINEVLEGLTGLLQSPIKGAEKHGLPGVLSGIALGVTGLVAKPAASILQVTGKTAQSIRNRSRLYQMARQRFRVRFPRPLSREAPLRPYSWEEALGTSVLAEAGDGVKLKDEVLVACKALKQAGKFVVITERLILIVSCSRLVDLGKPEFRGIPADLEWVVESEIGLETVMHADSHQGVVHIVGSSSDTLSRQNQ---RAKGGSGTSVRWNSPT--LPLIQTNLELEHTEDAENLLEILSSAIERGKNQGWGRRYLLH 3302
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Match: K4D8I1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g045170.1 PE=4 SV=1) HSP 1 Score: 476.478 bits (1225), Expect = 2.572e-157 Identity = 248/356 (69.66%), Postives = 296/356 (83.15%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDG-KLKDEVYVMSKALKNPGKYVIMTERLVLVVNCPSLVDLGKPEFRGVAANQEWVIETEISLHSVIHTDADDGVVHIVGSSSDALLRQNQQMSRKGGGGGTKMRW-NNPSTPLPLFQTNLELESEEDTKNFLRVLLSTIEQGKEQGGS 1063 MYKVFGSAGVIGNPMGFARS+G+G++DFL+ P +S+ ++ GLI GMAQGT SLLSNTVYALSDAATQFSKAAHKGIVAFTFD+QAV MER KG ++HSKG+INE FEGLTGLLQSP+ AE+HGLPG+LSGIALGVTGLV RPAASIL++TGKTAQSIRNRS+L+ +GS R RVRLPR L+RELPLRPY WEEA+G+SVL+EA+D KLK+E V+ KAL++ GK+VI+TERL+L+V+CPSLV PEF+GV A+ EW++ETEI + SVIH D D VHIVGSSSDALLRQN +S K G RW NNP T LPL QTNL S+++ ++FLRVLLSTI++ KEQG S Sbjct: 413 MYKVFGSAGVIGNPMGFARSMGLGLKDFLSAPVQSVFQTRAGLIKGMAQGTASLLSNTVYALSDAATQFSKAAHKGIVAFTFDDQAVGNMERHQKGISTHSKGVINEFFEGLTGLLQSPINGAERHGLPGVLSGIALGVTGLVARPAASILDITGKTAQSIRNRSKLHNLGSHRFRVRLPRHLNRELPLRPYCWEEAIGVSVLREAEDHVKLKEETLVVCKALRHDGKFVILTERLILIVSCPSLVKYRIPEFQGVPASPEWLVETEIGMDSVIHADNDYDEVHIVGSSSDALLRQN-HISHKRSWGPKGKRWNNNPRTSLPLLQTNLVFTSKDEAEDFLRVLLSTIDKAKEQGRS 767
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Match: VP13C_MOUSE (Vacuolar protein sorting-associated protein 13C OS=Mus musculus GN=Vps13c PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 9.274e-13 Identity = 51/170 (30.00%), Postives = 80/170 (47.06%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVAR----MERQLK----GEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIR 487 MY + V+GNP G R L G+ P + ++ P G+ G SL+ +TV + ++ + + KG+ A T D++ + M RQ K A KG + V G+TG++ PV+ A+K G G GI G+ G V RP I+++ T Q I+ Sbjct: 3408 MYVLVLGLDVLGNPFGLIRGLSEGVEALFYEPFQGAVQGPEEFAEGLVIGVRSLVGHTVGGAAGVVSRITGSVGKGLAAITMDKEYQQKRREEMGRQPKDFGDSLARGGKGFLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGAVARPTGGIIDMASSTFQGIQ 3577
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Match: VP13B_SCHPO (Vacuolar protein sorting-associated protein 13b OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps13b PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.025e-12 Identity = 58/247 (23.48%), Postives = 116/247 (46.96%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKS-ILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQ---------AVARMERQLKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVL 712 +YK+ G A +GNP+G ++ G+ D P + +L+ A+GT+S + T+Y +SD+ ++ + KG+ T D + + R + + G + + + + G GL + P + + + L G G+ GL +PA +L++T ++ IRN + + + + +VR+PR + + P+ E++G +L DDGK + Y+ ++N I T+ ++ Sbjct: 2688 IYKIAGRADFLGNPVGLFNNVASGVFDMFYEPYQGFLLQDSQSFGDSFARGTSSFMRKTIYGVSDSVSKITGTISKGLSTMTMDPKYQNSRRRFRSRNRPKEAVYGVTAGANSFYDSMSSGFKGL-KKPFTDPKNNSAGKFLKGFGKGMLGLATKPAIGLLDMTSNVSEGIRNSTDV-RTNPEIDKVRVPRYVEFGGLIVPFKPYESLGKYMLSCLDDGKYAFDEYLYHAEIQNVDILYISTKHFII 2932
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Match: VP13B_MOUSE (Vacuolar protein sorting-associated protein 13B OS=Mus musculus GN=Vps13b PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 8.983e-12 Identity = 50/210 (23.81%), Postives = 94/210 (44.76%), Query Frame = 2 Query: 11 VFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARME---RQLK---GEASHSKGIIN---EVFEGLTGLLQSPVKEAEK---------HGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWE 586 V GS ++G+P RS+G GI DF +P + + + P ++G+++GTTS + + + T + + + + + DE+ R E RQL GE +G+ + + G++ P++ +K H G++SG+ G+ G+ +P E+ +T I + + L Q+ QRC+ Y W+ Sbjct: 3642 VVGSLEILGSPASLVRSIGNGISDFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGALTSITNLATSLARNMGRLSLDEEHYNRQEEWRRQLPESLGEGLR-QGLSRLGISLLGAIAGIVDQPMQNFQKTSETQASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRCQPTHLYADQAPNSHVKYVWK 3850
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Match: VP13A_SCHPO (Vacuolar protein sorting-associated protein 13a OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps13a PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.366e-11 Identity = 58/263 (22.05%), Postives = 119/263 (45.25%), Query Frame = 2 Query: 2 MYKVFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSIL--KSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARMERQ---------LKGEASHSKGIINEVFEGLTGLLQSPVKEAEKHGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLY-QMGSQRCRVXXXXXXXXXXXXXXYSWEEAVGISVLKEADDGKLKDEVYVMSKALKNPGKYVIMTERLVLV----VNCPSLVDL 742 ++K+ GSA +GNP+G ++ G D P + + L G A+GT S + V+ ++D+ ++ + + + T D + +R L G + + + V G+ GL P+ A ++GLPG++ G+ G+ G +P + + ++ RN + ++ + ++ R+ R +S + + P+ EA+G LK D+G+ + Y ++N ++ R++ V +NC + L Sbjct: 2751 VHKIVGSADFLGNPVGLFTTITSGFADIFYEPFHGFILNEGSYELGIGFAKGTASFIKKAVFGITDSISKVTGTISRSLSVITLDPKFQSRRRAARIRNRPVHILYGVTAGAASLYTGVRSGVRGLALQPIIGARRNGLPGLVKGLGKGLVGFTTKPLVGLFDFASSISEGARNTTTVFDERHIEKLRL--SRLMSDDGVVYPFQLREALGQYWLKHLDNGRYFKDFYKAHIIIENKVLVILTNNRILFVQPQQLNCKKEIHL 3011
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Match: VP13B_HUMAN (Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 3.861e-10 Identity = 48/210 (22.86%), Postives = 93/210 (44.29%), Query Frame = 2 Query: 11 VFGSAGVIGNPMGFARSLGVGIRDFLAVPAKSILKSPTGLITGMAQGTTSLLSNTVYALSDAATQFSKAAHKGIVAFTFDEQAVARME---RQLK---GEASHSKGIIN---EVFEGLTGLLQSPVKEAEK---------HGLPGILSGIALGVTGLVGRPAASILEVTGKTAQSIRNRSRLYQMGSQRCRVXXXXXXXXXXXXXXYSWE 586 V GS ++G+P RS+G G+ DF +P + + + P ++G+++GTTS + + + T + + + + + DE+ R E RQL GE +G+ + + G++ P++ +K H G++SG+ G+ G+ +P E+ +T I + + L Q+ QR + Y W+ Sbjct: 3650 VVGSLDILGSPASLVRSIGNGVADFFRLPYEGLTRGPGAFVSGVSRGTTSFVKHISKGTLTSITNLATSLARNMDRLSLDEEHYNRQEEWRRQLPESLGEGLR-QGLSRLGISLLGAIAGIVDQPMQNFQKTSEAQASAGHKAKGVISGVGKGIMGVFTKPIGGAAELVSQTGYGILHGAGLSQLPKQRHQPSDLHADQAPNSHVKYVWK 3858 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0009878 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0009878 ID=g.arboreum_cottongen_reftransV1_0009878; Name=g.arboreum_cottongen_reftransV1_0009878; organism=Gossypium arboreum; type=contig; length=1329bpback to top |