g.arboreum_cottongen_reftransV1_0002376, g.arboreum_cottongen_reftransV1_0002376 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A059BLR7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00807 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.294e-63 Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E STG+QYACK+ISKRKLV KNDKEDM+REI IMQHLSGQPNIVEFKGAYED+ +VHLVMELCAGGELFDRIIAKGHYSERAAA+ICRAIVNVVHACHFMGVMHRDLK Sbjct: 114 EISTGRQYACKSISKRKLVSKNDKEDMRREIHIMQHLSGQPNIVEFKGAYEDRHAVHLVMELCAGGELFDRIIAKGHYSERAAATICRAIVNVVHACHFMGVMHRDLK 221
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: W9QQG6_9ROSA (Calcium-dependent protein kinase 9 OS=Morus notabilis GN=L484_017849 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.321e-63 Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG+ YACK+ISKRKLV KNDKEDMKREI+IMQHLSGQPNIVEFKGAYEDKQSV+LVMELCAGGELFDRIIAKGHYSERAAASICRAIV VVH CHFMGVMHRDLK Sbjct: 120 ENSTGRLYACKSISKRKLVSKNDKEDMKREIRIMQHLSGQPNIVEFKGAYEDKQSVNLVMELCAGGELFDRIIAKGHYSERAAASICRAIVKVVHNCHFMGVMHRDLK 227
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: F6HEK1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00410 PE=4 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.605e-63 Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG QYACK+ISKRKLV KNDKED++REIQIMQ LSGQPNIVEFKGAYED+ SVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVH CHFMGVMHRDLK Sbjct: 107 ENSTGLQYACKSISKRKLVTKNDKEDIRREIQIMQDLSGQPNIVEFKGAYEDRLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHICHFMGVMHRDLK 214
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: I1N0P1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 6.389e-63 Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG QYACK+ISKRKLV+K+DKED+KREIQIMQHLSGQPNIVEFKGAYED+ SVH+VMELCAGGELFDRIIAKGHYSERAAASICR IVNVVH CHFMGVMHRDLK Sbjct: 116 ENSTGLQYACKSISKRKLVKKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDRNSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLK 223
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0B2P0E9_GLYSO (Calcium-dependent protein kinase 9 OS=Glycine soja GN=glysoja_009702 PE=4 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.664e-63 Identity = 98/108 (90.74%), Postives = 104/108 (96.30%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG QYACK+ISKRKLV+K+DKED+KREIQIMQHLSGQPNIVEFKGAYED+ SVH+VMELCAGGELFDRIIAKGHYSERAAASICR IVNVVH CHFMGVMHRDLK Sbjct: 116 ENSTGLQYACKSISKRKLVKKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDRSSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLK 223
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.586e-51 Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E S+GK +ACK+I KRKL+R D+ED++REIQIM +LSGQPNIVE KGAYED+QSVHLVMELC GGELFD+I +GHYSE+AAA I R++V VV CHFMGV+HRDLK Sbjct: 117 EISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLK 224
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 7.084e-48 Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E TG YACK+I KRKL+ + +ED+K EIQIMQHLSGQPN+VE KG+YED+ SVHLVMELCAGGELFDRIIA+GHYSERAAA ++IV+VV CH GV+HRDLK Sbjct: 88 EIGTGNIYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSERAAAGTIKSIVDVVQICHLNGVIHRDLK 195
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.828e-47 Identity = 76/108 (70.37%), Postives = 88/108 (81.48%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG +YACK+ISKRKL+ K D ED++REIQIM HLSG NIV KGAYED VH+VME+C+GGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK Sbjct: 113 ENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIVMEICSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 220
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.011e-46 Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E +TGK++ACK+I+KRKL+ D ED++REIQIM HL+G PN++ KGAYED +VHLVME CAGGELFDRII +GHY+ER AA + R IV VV ACH +GVMHRDLK Sbjct: 169 EKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLK 276
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.524e-46 Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E TG +YACK+ISKRKL+ D ED++REIQIM HL+G PN++ KGAYED +VHLVMELC+GGELFDRII +GHY+ER AA + R IV V+ ACH +GVMHRDLK Sbjct: 205 EKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLK 312
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 8.727e-46 Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E STG++YACK+I+KRKL+ K D ED++REIQIM HL+G NIV KGAYED VH+VMELC+GGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK Sbjct: 43 EISTGREYACKSITKRKLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELIKIIVGVVEACHSLGVMHRDLK 150
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.676e-45 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = -2 Query: 3 TGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 317 T +Q ACK+I R+LV K+D ED++RE+QIM HLSG NIV+ KGAYED+ SV+L+MELC GGELFDRII+KG YSERAAA +CR +V VVH+CH MGVMHRDLK Sbjct: 100 TKQQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLK 204
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.738e-45 Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 + TGK++ACKTI+KRKL D ED++REIQIM HLSG PN+++ GAYED +VH+VME+CAGGELFDRII +GHY+E+ AA + R IV V+ ACH +GVMHRDLK Sbjct: 153 DKKTGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELARIIVGVIEACHSLGVMHRDLK 260
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.378e-45 Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = -2 Query: 3 STGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 320 +TG YACK+ISKRKL+ K D ED++REIQIM HL+G NIV KGAYED VH+VMELCAGGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK Sbjct: 106 ATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 211
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 5.156e-44 Identity = 73/108 (67.59%), Postives = 86/108 (79.63%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E ++G YACK+ISKRKL+ K D ED++REIQIM HL+G +IV KGAYED VH+VMELCAGGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK Sbjct: 116 EIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 223 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0002376 ID=g.arboreum_cottongen_reftransV1_0002376; Name=g.arboreum_cottongen_reftransV1_0002376; organism=Gossypium arboreum; type=contig; length=327bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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