g.arboreum_cottongen_reftransV1_0002376, g.arboreum_cottongen_reftransV1_0002376 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2VG05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.713e-71 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F6M0_THECC (Calmodulin-domain protein kinase 9 isoform 3 OS=Theobroma cacao GN=TCM_030876 PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.555e-70 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F5L9_THECC (Calmodulin-domain protein kinase 9 isoform 2 OS=Theobroma cacao GN=TCM_030876 PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 2.183e-70 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2U231_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.958e-70 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0B0NYW7_GOSAR (Calcium-dependent protein kinase 9 OS=Gossypium arboreum GN=F383_23464 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.031e-69 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F4S0_THECC (Calmodulin-domain protein kinase 9 isoform 1 OS=Theobroma cacao GN=TCM_030876 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.259e-69 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2SEY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 3.106e-69 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2Q9U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G088800 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.580e-67 Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISK+KLV +NDKEDM+REIQIMQHLSGQPNIVEFKGAYEDK SVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 109 ENSTGKQYACKTISKKKLVTRNDKEDMRREIQIMQHLSGQPNIVEFKGAYEDKLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 216
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A067F5T2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0096582mg PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.727e-67 Identity = 99/108 (91.67%), Postives = 106/108 (98.15%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTG+Q+ACK+ISKRKLV KNDK+D+KREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICR+IVNVVH CHFMGVMHRDLK Sbjct: 100 ENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRSIVNVVHICHFMGVMHRDLK 207
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2R2U8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G088800 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 5.113e-67 Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 ENSTGKQYACKTISK+KLV +NDKEDM+REIQIMQHLSGQPNIVEFKGAYEDK SVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK Sbjct: 109 ENSTGKQYACKTISKKKLVTRNDKEDMRREIQIMQHLSGQPNIVEFKGAYEDKLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 216
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 8.426e-44 Identity = 72/108 (66.67%), Postives = 85/108 (78.70%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E S+G YACK+I+KRKL+ K D ED++REIQIM HL+G NIV KGAYED VH+VMELC GGELFDRII +GHY+ER AA + + IV VV ACH +GVMHRDLK Sbjct: 91 ELSSGIDYACKSIAKRKLISKEDVEDVRREIQIMHHLAGHKNIVSIKGAYEDPLYVHIVMELCGGGELFDRIIQRGHYTERKAADLTKIIVGVVEACHSLGVMHRDLK 198
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKP_ARATH (Calcium-dependent protein kinase 25 OS=Arabidopsis thaliana GN=CPK25 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.703e-44 Identity = 68/108 (62.96%), Postives = 86/108 (79.63%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E TG++YACK+I KRKL + D ED++REI+IM+HL GQPN++ KGAYED +VH+VMELC GGELFDRI+ +GHYSER AA + + I+ VV CH +GVMHRDLK Sbjct: 151 EKGTGEEYACKSIPKRKLENEEDVEDVRREIEIMKHLLGQPNVISIKGAYEDSVAVHMVMELCRGGELFDRIVERGHYSERKAAHLAKVILGVVQTCHSLGVMHRDLK 258
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKB_ORYSJ (Calcium-dependent protein kinase isoform 11 OS=Oryza sativa subsp. japonica GN=CPK11 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 2.140e-43 Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E +TG +YACKTI KRKL+ K D ED++REIQIM HLSG N+V K YED Q+VH+VMELCAGGELFDRI KGHYSER AA + R IV++V CH +GVMHRDLK Sbjct: 98 EINTGCEYACKTIPKRKLITKEDVEDVRREIQIMHHLSGHKNVVAIKDVYEDGQAVHIVMELCAGGELFDRIQEKGHYSERKAAELIRIIVSIVAMCHSLGVMHRDLK 205
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.765e-42 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E ST YACK+I KRKLV + D ED+ REIQIM HLS PN+V KG YED VH+VME+C GGELFDRI++KGH+SER A + + I+ VV ACH +GVMHRDLK Sbjct: 45 EKSTSANYACKSIPKRKLVCREDYEDVWREIQIMHHLSEHPNVVRIKGTYEDSVFVHIVMEVCEGGELFDRIVSKGHFSEREAVKLIKTILGVVEACHSLGVMHRDLK 152
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKR_ARATH (Calcium-dependent protein kinase 27 OS=Arabidopsis thaliana GN=CPK27 PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 6.198e-42 Identity = 73/112 (65.18%), Postives = 87/112 (77.68%), Query Frame = -2 Query: 3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIA----KGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326 E STGK +ACKTI K KL + +ED+KREI+IM+ LSG+PNIVEFK AYEDK SVH+VME C GGEL+D+I+A YSE+ AA I R+IVNVV CH+MGVMHRDLK Sbjct: 47 EKSTGKTFACKTILKTKLKDEECEEDVKREIRIMKQLSGEPNIVEFKNAYEDKDSVHIVMEYCGGGELYDKILALYDVGKSYSEKEAAGIIRSIVNVVKNCHYMGVMHRDLK 158 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0002376 ID=g.arboreum_cottongen_reftransV1_0002376; Name=g.arboreum_cottongen_reftransV1_0002376; organism=Gossypium arboreum; type=contig; length=327bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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